AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058284

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058284.t1 MTR_2g033170 95.719 327 14 0 1 327 1 327 0.0 525
MS.gene058284.t1 MTR_4g123040 65.653 329 87 8 1 324 1 308 7.52e-125 360
MS.gene058284.t1 MTR_1g086530 69.032 155 48 0 11 165 20 174 4.21e-82 250
MS.gene058284.t1 MTR_1g086510 68.047 169 47 2 18 186 15 176 6.62e-81 247
MS.gene058284.t1 MTR_1g110460 62.428 173 65 0 18 190 20 192 3.06e-78 241
MS.gene058284.t1 MTR_7g035075 82.301 113 20 0 18 130 8 120 2.71e-67 210
MS.gene058284.t1 MTR_6g006030 78.947 114 24 0 18 131 8 121 1.17e-65 206
MS.gene058284.t1 MTR_1g045610 70.476 105 31 0 25 129 22 126 1.16e-50 169
MS.gene058284.t1 MTR_1g073170 59.200 125 48 1 5 129 4 125 3.47e-49 165
MS.gene058284.t1 MTR_5g029840 56.693 127 53 1 20 146 8 132 9.11e-46 158
MS.gene058284.t1 MTR_8g027345 59.664 119 46 1 21 137 9 127 3.76e-44 153
MS.gene058284.t1 MTR_2g096380 57.273 110 47 0 23 132 5 114 6.51e-44 150
MS.gene058284.t1 MTR_2g089620 61.682 107 41 0 20 126 8 114 1.25e-43 152
MS.gene058284.t1 MTR_2g011660 58.559 111 46 0 24 134 13 123 1.26e-43 153
MS.gene058284.t1 MTR_4g063100 58.333 108 45 0 25 132 8 115 1.51e-43 150
MS.gene058284.t1 MTR_4g091490 58.559 111 46 0 24 134 13 123 3.24e-43 152
MS.gene058284.t1 MTR_4g125520 62.385 109 41 0 24 132 12 120 3.69e-43 151
MS.gene058284.t1 MTR_7g117730 63.303 109 40 0 21 129 9 117 3.87e-43 149
MS.gene058284.t1 MTR_3g052450 54.054 111 51 0 20 130 36 146 8.93e-43 155
MS.gene058284.t1 MTR_3g074520 55.000 120 54 0 20 139 8 127 9.15e-43 151
MS.gene058284.t1 MTR_5g007370 55.556 117 52 0 18 134 6 122 1.23e-42 149
MS.gene058284.t1 MTR_4g478180 56.522 115 50 0 20 134 9 123 1.55e-42 150
MS.gene058284.t1 MTR_3g083540 63.208 106 39 0 21 126 38 143 2.87e-42 148
MS.gene058284.t1 MTR_1g062940 58.879 107 44 0 23 129 5 111 4.33e-42 145
MS.gene058284.t1 MTR_1g076150 54.622 119 54 0 20 138 8 126 4.42e-42 147
MS.gene058284.t1 MTR_4g121460 40.314 191 91 2 20 210 8 175 4.78e-42 149
MS.gene058284.t1 MTR_1g100653 58.879 107 44 0 24 130 12 118 8.04e-42 147
MS.gene058284.t1 MTR_3g052430 54.630 108 49 0 23 130 40 147 1.06e-41 152
MS.gene058284.t1 MTR_6g012690 52.381 126 59 1 20 144 8 133 2.62e-41 147
MS.gene058284.t1 MTR_8g095390 62.376 101 38 0 26 126 14 114 3.82e-41 146
MS.gene058284.t1 MTR_8g042410 47.407 135 64 1 2 129 8 142 5.06e-41 150
MS.gene058284.t1 MTR_7g011170 53.043 115 54 0 20 134 8 122 5.62e-41 145
MS.gene058284.t1 MTR_1g017000 57.407 108 45 1 20 126 8 115 8.12e-41 143
MS.gene058284.t1 MTR_7g076740 56.034 116 50 1 20 134 8 123 9.30e-41 144
MS.gene058284.t1 MTR_1g085040 54.310 116 53 0 24 139 12 127 9.92e-41 146
MS.gene058284.t1 MTR_4g102380 53.913 115 53 0 20 134 8 122 1.14e-40 143
MS.gene058284.t1 MTR_4g073420 50.649 154 66 2 26 170 14 166 1.16e-40 144
MS.gene058284.t1 MTR_3g065440 50.794 126 61 1 20 144 8 133 1.19e-40 144
MS.gene058284.t1 MTR_2g097910 56.481 108 47 0 24 131 20 127 1.28e-40 144
MS.gene058284.t1 MTR_5g078140 53.043 115 54 0 20 134 8 122 1.30e-40 144
MS.gene058284.t1 MTR_3g097450 63.366 101 37 0 26 126 14 114 1.75e-40 144
MS.gene058284.t1 MTR_2g099740 56.311 103 45 0 24 126 12 114 2.12e-40 146
MS.gene058284.t1 MTR_1g043080 58.252 103 43 0 24 126 12 114 2.41e-40 142
MS.gene058284.t1 MTR_7g115650 52.252 111 53 0 20 130 8 118 2.85e-40 140
MS.gene058284.t1 MTR_4g065017 56.481 108 47 0 24 131 17 124 3.17e-40 144
MS.gene058284.t1 MTR_3g011610 54.717 106 48 0 24 129 37 142 5.03e-40 147
MS.gene058284.t1 MTR_4g082290 51.639 122 59 0 20 141 8 129 7.68e-40 144
MS.gene058284.t1 MTR_4g485530 55.085 118 53 0 19 136 7 124 7.98e-40 139
MS.gene058284.t1 MTR_8g031360 56.881 109 46 1 19 126 8 116 8.27e-40 142
MS.gene058284.t1 MTR_7g096930 55.856 111 49 0 20 130 8 118 1.20e-39 141
MS.gene058284.t1 MTR_8g098860 57.009 107 46 0 24 130 12 118 1.21e-39 142
MS.gene058284.t1 MTR_7g110830 55.856 111 49 0 24 134 12 122 1.27e-39 143
MS.gene058284.t1 MTR_5g079670 49.587 121 61 0 20 140 7 127 1.32e-39 139
MS.gene058284.t1 MTR_4g082230 51.639 122 59 0 20 141 8 129 1.82e-39 144
MS.gene058284.t1 MTR_1g043050 57.282 103 44 0 24 126 12 114 2.80e-39 139
MS.gene058284.t1 MTR_2g067420 57.692 104 44 0 20 123 10 113 2.96e-39 141
MS.gene058284.t1 MTR_8g017440 56.311 103 45 0 24 126 12 114 3.15e-39 141
MS.gene058284.t1 MTR_0008s0390 55.455 110 49 0 19 128 8 117 4.29e-39 139
MS.gene058284.t1 MTR_1g021230 54.717 106 48 0 24 129 57 162 6.25e-39 143
MS.gene058284.t1 MTR_0251s0050 54.464 112 51 0 19 130 8 119 7.92e-39 139
MS.gene058284.t1 MTR_1g100667 52.101 119 57 0 25 143 14 132 9.08e-39 138
MS.gene058284.t1 MTR_5g010020 61.856 97 37 0 24 120 12 108 1.13e-38 140
MS.gene058284.t1 MTR_0008s0280 56.190 105 46 0 25 129 13 117 1.38e-38 137
MS.gene058284.t1 MTR_2g034790 56.075 107 47 0 20 126 8 114 1.42e-38 139
MS.gene058284.t1 MTR_7g010210 34.252 254 148 7 20 257 8 258 1.59e-38 139
MS.gene058284.t1 MTR_0008s0470 56.190 105 46 0 24 128 13 117 2.50e-38 138
MS.gene058284.t1 MTR_1g085640 54.054 111 51 0 24 134 12 122 2.56e-38 140
MS.gene058284.t1 MTR_2g064160 53.398 103 48 0 24 126 11 113 3.10e-38 138
MS.gene058284.t1 MTR_7g010210 39.444 180 98 4 20 189 8 186 3.65e-38 137
MS.gene058284.t1 MTR_2g089420 52.893 121 56 1 24 143 11 131 3.89e-38 141
MS.gene058284.t1 MTR_8g017540 54.369 103 47 0 24 126 58 160 4.25e-38 140
MS.gene058284.t1 MTR_4g100720 56.881 109 47 0 24 132 13 121 4.48e-38 134
MS.gene058284.t1 MTR_2g089450 56.075 107 47 0 20 126 8 114 6.44e-38 135
MS.gene058284.t1 MTR_3g028740 55.660 106 47 0 24 129 22 127 7.35e-38 138
MS.gene058284.t1 MTR_7g111290 55.172 116 52 0 24 139 12 127 9.81e-38 138
MS.gene058284.t1 MTR_8g020490 54.464 112 49 1 15 126 1 110 1.48e-37 135
MS.gene058284.t1 MTR_3g039990 49.107 112 57 0 20 131 9 120 1.51e-37 136
MS.gene058284.t1 MTR_8g017500 53.398 103 48 0 24 126 12 114 1.75e-37 137
MS.gene058284.t1 MTR_6g009430 50.435 115 57 0 20 134 8 122 2.02e-37 137
MS.gene058284.t1 MTR_0140s0030 51.402 107 52 0 20 126 9 115 6.05e-37 135
MS.gene058284.t1 MTR_0489s0020 51.402 107 52 0 20 126 9 115 6.05e-37 135
MS.gene058284.t1 MTR_1g112760 55.340 103 46 0 24 126 13 115 6.65e-37 132
MS.gene058284.t1 MTR_7g087130 51.402 107 52 0 20 126 8 114 6.72e-37 135
MS.gene058284.t1 MTR_8g017340 54.808 104 46 1 24 126 12 115 7.67e-37 138
MS.gene058284.t1 MTR_0063s0090 47.656 128 60 1 20 147 8 128 1.23e-36 131
MS.gene058284.t1 MTR_3g077110 52.252 111 53 0 24 134 12 122 1.62e-36 134
MS.gene058284.t1 MTR_4g105130 54.369 103 47 0 24 126 12 114 3.32e-36 134
MS.gene058284.t1 MTR_3g461490 49.593 123 61 1 23 144 11 133 5.41e-36 132
MS.gene058284.t1 MTR_6g012180 53.398 103 48 0 20 122 8 110 5.56e-36 132
MS.gene058284.t1 MTR_4g057635 54.630 108 48 1 20 126 8 115 8.83e-36 132
MS.gene058284.t1 MTR_6g055910 54.902 102 46 0 25 126 15 116 1.21e-35 130
MS.gene058284.t1 MTR_5g042030 50.442 113 56 0 22 134 5 117 2.63e-35 130
MS.gene058284.t1 MTR_8g017350 52.885 104 48 1 24 126 12 115 3.29e-35 135
MS.gene058284.t1 MTR_8g017390 52.885 104 48 1 24 126 12 115 7.22e-35 132
MS.gene058284.t1 MTR_3g103570 54.630 108 48 1 20 126 8 115 1.01e-34 130
MS.gene058284.t1 MTR_1g017140 53.704 108 49 1 20 126 8 115 2.57e-34 128
MS.gene058284.t1 MTR_2g088170 46.774 124 62 1 10 129 11 134 2.66e-34 130
MS.gene058284.t1 MTR_2g095520 53.846 104 47 1 20 122 8 111 4.03e-34 127
MS.gene058284.t1 MTR_8g006470 44.068 118 65 1 15 131 1 118 4.46e-34 126
MS.gene058284.t1 MTR_1g083630 48.361 122 58 1 8 129 1 117 4.64e-34 132
MS.gene058284.t1 MTR_5g014990 51.724 116 53 2 20 132 8 123 5.12e-34 127
MS.gene058284.t1 MTR_0197s0010 36.316 190 111 3 29 215 6 188 2.33e-33 123
MS.gene058284.t1 MTR_7g109320 53.211 109 51 0 20 128 8 116 4.18e-33 125
MS.gene058284.t1 MTR_7g102110 50.000 108 53 1 20 126 8 115 4.85e-33 123
MS.gene058284.t1 MTR_4g063100 66.234 77 26 0 56 132 10 86 6.58e-33 122
MS.gene058284.t1 MTR_6g090405 52.778 108 50 1 20 126 8 115 7.30e-33 122
MS.gene058284.t1 MTR_4g097570 54.902 102 45 1 20 120 8 109 1.61e-32 122
MS.gene058284.t1 MTR_2g096380 66.234 77 26 0 56 132 19 95 1.55e-31 118
MS.gene058284.t1 MTR_4g128670 53.846 104 47 1 20 122 8 111 1.60e-31 121
MS.gene058284.t1 MTR_5g079120 42.537 134 77 0 6 139 43 176 2.29e-31 120
MS.gene058284.t1 MTR_4g097570 54.369 103 45 2 20 120 8 110 5.84e-31 118
MS.gene058284.t1 MTR_5g062790 44.643 112 61 1 16 126 1 112 6.20e-31 119
MS.gene058284.t1 MTR_5g088080 46.296 108 57 1 23 129 11 118 8.21e-31 117
MS.gene058284.t1 MTR_5g088150 46.296 108 57 1 23 129 11 118 8.21e-31 117
MS.gene058284.t1 MTR_5g488210 46.296 108 57 1 23 129 11 118 8.21e-31 117
MS.gene058284.t1 MTR_5g088640 46.296 108 57 1 23 129 11 118 8.84e-31 117
MS.gene058284.t1 MTR_5g078910 50.485 103 51 0 24 126 7 109 1.28e-30 117
MS.gene058284.t1 MTR_5g488170 46.296 108 57 1 23 129 11 118 1.48e-30 116
MS.gene058284.t1 MTR_8g060940 53.465 101 47 0 24 124 7 107 3.13e-30 115
MS.gene058284.t1 MTR_5g079290 50.485 103 51 0 24 126 17 119 3.20e-30 115
MS.gene058284.t1 MTR_0247s0040 51.961 102 49 0 24 125 7 108 3.81e-30 113
MS.gene058284.t1 MTR_5g078800 50.476 105 52 0 24 128 7 111 6.62e-30 115
MS.gene058284.t1 MTR_5g079220 50.485 103 51 0 24 126 21 123 1.52e-29 114
MS.gene058284.t1 MTR_5g078950 49.533 107 54 0 19 125 2 108 2.86e-29 113
MS.gene058284.t1 MTR_0001s0360 50.485 103 51 0 24 126 7 109 3.80e-29 112
MS.gene058284.t1 MTR_4g029540 42.056 107 61 1 24 129 10 116 4.08e-29 113
MS.gene058284.t1 MTR_5g088610 42.609 115 65 1 16 129 1 115 5.08e-29 114
MS.gene058284.t1 MTR_7g017260 46.087 115 60 1 16 128 17 131 6.52e-29 112
MS.gene058284.t1 MTR_5g078860 50.485 103 51 0 24 126 7 109 1.47e-28 112
MS.gene058284.t1 MTR_0193s0090 48.544 103 53 0 24 126 7 109 3.32e-28 108
MS.gene058284.t1 MTR_5g016510 33.516 182 106 3 22 200 1 170 4.66e-27 108
MS.gene058284.t1 MTR_5g078930 45.528 123 63 1 25 143 10 132 5.18e-27 106
MS.gene058284.t1 MTR_7g061330 44.231 104 57 1 23 126 110 212 3.52e-26 108
MS.gene058284.t1 MTR_7g461410 44.231 104 57 1 23 126 110 212 3.52e-26 108
MS.gene058284.t1 MTR_5g007300 55.844 77 34 0 24 100 64 140 5.90e-26 100
MS.gene058284.t1 MTR_7g061330 44.231 104 57 1 23 126 74 176 8.32e-26 107
MS.gene058284.t1 MTR_6g055910 61.429 70 27 0 57 126 18 87 8.99e-26 103
MS.gene058284.t1 MTR_7g111290 58.333 84 35 0 56 139 2 85 1.67e-25 104
MS.gene058284.t1 MTR_3g045430 40.678 118 69 1 24 140 13 130 1.68e-25 103
MS.gene058284.t1 MTR_3g110028 33.974 156 96 2 23 178 82 230 3.16e-25 106
MS.gene058284.t1 MTR_5g070020 30.601 183 124 2 9 189 103 284 8.72e-25 103
MS.gene058284.t1 MTR_4g128190 42.609 115 52 2 18 131 5 106 1.03e-24 100
MS.gene058284.t1 MTR_5g049190 41.509 106 60 2 26 130 19 123 3.02e-24 99.4
MS.gene058284.t1 MTR_6g015455 42.478 113 64 1 22 134 1 112 3.25e-24 103
MS.gene058284.t1 MTR_1g085880 44.348 115 62 2 18 130 5 119 3.79e-24 97.8
MS.gene058284.t1 MTR_3g101290 41.284 109 63 1 20 128 31 138 4.98e-24 98.2
MS.gene058284.t1 MTR_4g019370 43.689 103 57 1 26 128 38 139 5.44e-24 100
MS.gene058284.t1 MTR_6g027340 38.739 111 67 1 29 139 19 128 7.43e-24 97.4
MS.gene058284.t1 MTR_1g026870 40.385 104 61 1 23 126 82 184 1.53e-23 102
MS.gene058284.t1 MTR_1g085770 44.348 115 62 2 18 130 5 119 1.86e-23 98.6
MS.gene058284.t1 MTR_7g037260 37.008 127 79 1 21 147 140 265 2.90e-23 99.0
MS.gene058284.t1 MTR_4g088015 36.000 125 79 1 23 147 218 341 5.04e-23 99.4
MS.gene058284.t1 MTR_6g027360 37.069 116 72 1 24 139 76 190 1.22e-22 96.3
MS.gene058284.t1 MTR_4g094982 40.187 107 63 1 22 128 1 106 1.42e-22 95.5
MS.gene058284.t1 MTR_3g077650 37.838 111 67 2 21 130 176 285 1.44e-22 98.2
MS.gene058284.t1 MTR_3g463400 41.414 99 57 1 22 120 129 226 2.25e-22 97.4
MS.gene058284.t1 MTR_4g105660 33.083 133 88 1 1 133 155 286 5.00e-22 96.3
MS.gene058284.t1 MTR_7g450950 42.308 104 57 2 26 127 157 259 4.70e-21 92.4
MS.gene058284.t1 MTR_7g035350 44.565 92 50 1 29 120 228 318 6.12e-21 93.2
MS.gene058284.t1 MTR_5g010650 43.878 98 54 1 23 120 107 203 9.22e-21 92.8
MS.gene058284.t1 MTR_1g057980 42.000 100 57 1 21 120 75 173 1.06e-20 90.9
MS.gene058284.t1 MTR_6g074860 44.211 95 52 1 26 120 4 97 1.64e-20 89.4
MS.gene058284.t1 MTR_7g451170 43.750 96 51 2 26 120 191 284 2.12e-20 91.7
MS.gene058284.t1 MTR_5g041570 40.000 105 62 1 26 130 134 237 4.29e-20 90.9
MS.gene058284.t1 MTR_7g086960 29.834 181 111 4 26 206 89 253 5.57e-20 89.7
MS.gene058284.t1 MTR_6g027370 36.842 114 71 1 26 139 99 211 5.73e-20 89.7
MS.gene058284.t1 MTR_4g082040 39.048 105 63 1 26 130 105 208 1.02e-19 89.7
MS.gene058284.t1 MTR_5g082910 41.071 112 61 2 9 120 6 112 1.38e-19 87.4
MS.gene058284.t1 MTR_7g061550 36.283 113 70 1 26 136 7 119 1.49e-19 88.6
MS.gene058284.t1 MTR_3g089045 34.646 127 82 1 18 144 8 133 1.54e-18 84.7
MS.gene058284.t1 MTR_7g037130 30.719 153 103 2 12 164 133 282 4.87e-18 84.3
MS.gene058284.t1 MTR_8g468380 37.143 140 73 4 29 159 25 158 9.82e-18 84.0
MS.gene058284.t1 MTR_5g038910 40.594 101 59 1 29 129 29 128 2.35e-17 82.8
MS.gene058284.t1 MTR_5g038910 40.594 101 59 1 29 129 29 128 3.87e-17 81.6
MS.gene058284.t1 MTR_4g063100 64.706 51 18 0 82 132 1 51 5.30e-17 78.2
MS.gene058284.t1 MTR_2g096380 64.706 51 18 0 82 132 1 51 1.65e-16 76.6
MS.gene058284.t1 MTR_0023s0210 40.244 82 49 0 19 100 2 83 9.06e-14 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058284.t1 AT5G49620 54.462 325 82 12 19 324 21 298 1.54e-88 268
MS.gene058284.t1 AT1G48000 74.675 154 35 1 22 175 30 179 5.53e-85 256
MS.gene058284.t1 AT5G49620 51.917 339 83 12 19 324 21 312 1.28e-84 258
MS.gene058284.t1 AT3G06490 50.148 337 111 11 1 316 1 301 1.37e-84 258
MS.gene058284.t1 AT2G47190 74.648 142 36 0 19 160 15 156 1.43e-78 241
MS.gene058284.t1 AT1G68320 71.329 143 41 0 23 165 18 160 1.18e-74 231
MS.gene058284.t1 AT1G25340 63.576 151 55 0 25 175 19 169 1.08e-69 219
MS.gene058284.t1 AT3G27810 80.000 110 22 0 21 130 17 126 2.80e-65 206
MS.gene058284.t1 AT1G25340 60.927 151 54 1 25 175 19 164 2.51e-64 205
MS.gene058284.t1 AT1G25340 60.927 151 54 1 25 175 19 164 6.71e-64 205
MS.gene058284.t1 AT5G40350 80.952 105 20 0 23 127 16 120 1.25e-62 198
MS.gene058284.t1 AT3G01530 71.681 113 32 0 17 129 18 130 9.66e-61 193
MS.gene058284.t1 AT3G24310 67.890 109 35 0 21 129 15 123 3.90e-50 168
MS.gene058284.t1 AT4G13480 68.571 105 33 0 25 129 7 111 2.57e-49 166
MS.gene058284.t1 AT3G30210 66.667 105 35 0 25 129 28 132 3.57e-49 166
MS.gene058284.t1 AT3G02940 60.000 115 46 0 20 134 8 122 1.95e-45 157
MS.gene058284.t1 AT5G59780 59.091 110 45 0 23 132 7 116 3.41e-45 154
MS.gene058284.t1 AT3G02940 60.000 115 46 0 20 134 8 122 3.71e-45 157
MS.gene058284.t1 AT3G02940 60.000 115 46 0 20 134 8 122 3.71e-45 157
MS.gene058284.t1 AT3G46130 58.929 112 46 0 25 136 10 121 3.86e-45 155
MS.gene058284.t1 AT5G16770 53.676 136 61 2 20 153 8 143 6.21e-44 153
MS.gene058284.t1 AT5G16770 53.676 136 61 2 20 153 8 143 6.21e-44 153
MS.gene058284.t1 AT5G16770 53.676 136 61 2 20 153 8 143 9.25e-44 153
MS.gene058284.t1 AT5G16770 53.676 136 61 2 20 153 8 143 9.25e-44 153
MS.gene058284.t1 AT5G54230 56.757 111 48 0 24 134 12 122 1.60e-43 152
MS.gene058284.t1 AT3G27810 85.135 74 11 0 57 130 4 77 1.95e-43 147
MS.gene058284.t1 AT3G13540 55.285 123 55 0 21 143 20 142 3.54e-43 149
MS.gene058284.t1 AT4G05100 58.559 111 46 0 24 134 13 123 5.19e-43 151
MS.gene058284.t1 AT4G34990 67.327 101 33 0 26 126 14 114 6.52e-43 149
MS.gene058284.t1 AT5G65230 54.918 122 55 0 18 139 6 127 6.91e-43 150
MS.gene058284.t1 AT4G21440 56.757 111 48 0 24 134 12 122 7.18e-43 151
MS.gene058284.t1 AT3G23250 40.462 173 99 1 20 192 8 176 1.28e-42 149
MS.gene058284.t1 AT4G28110 58.879 107 44 0 20 126 8 114 1.48e-42 149
MS.gene058284.t1 AT5G15310 55.652 115 51 0 20 134 8 122 1.74e-42 150
MS.gene058284.t1 AT5G15310 55.652 115 51 0 20 134 8 122 1.85e-42 147
MS.gene058284.t1 AT5G15310 55.652 115 51 0 20 134 8 122 1.90e-42 149
MS.gene058284.t1 AT1G22640 57.265 117 50 0 24 140 12 128 3.04e-42 147
MS.gene058284.t1 AT1G16490 58.879 107 44 0 20 126 10 116 5.45e-42 147
MS.gene058284.t1 AT3G01140 52.033 123 59 0 20 142 8 130 6.10e-42 149
MS.gene058284.t1 AT5G10280 55.652 115 51 0 20 134 8 122 7.97e-42 148
MS.gene058284.t1 AT1G34670 50.746 134 65 1 20 153 8 140 1.03e-41 149
MS.gene058284.t1 AT3G01140 52.033 123 59 0 20 142 51 173 1.58e-41 149
MS.gene058284.t1 AT5G14340 56.522 115 50 0 20 134 20 134 1.72e-41 145
MS.gene058284.t1 AT1G35515 61.165 103 40 0 24 126 12 114 2.23e-41 143
MS.gene058284.t1 AT4G09460 62.376 101 38 0 26 126 14 114 3.05e-41 144
MS.gene058284.t1 AT1G18570 60.377 106 42 0 21 126 10 115 3.23e-41 147
MS.gene058284.t1 AT1G09540 55.172 116 52 0 24 139 12 127 3.32e-41 147
MS.gene058284.t1 AT4G22680 52.500 120 57 0 20 139 8 127 3.54e-41 144
MS.gene058284.t1 AT5G07690 58.252 103 43 0 24 126 12 114 6.70e-41 146
MS.gene058284.t1 AT4G12350 52.500 120 57 0 20 139 8 127 7.67e-41 144
MS.gene058284.t1 AT2G16720 61.165 103 40 0 24 126 12 114 8.48e-41 144
MS.gene058284.t1 AT5G40350 84.507 71 11 0 57 127 5 75 9.71e-41 140
MS.gene058284.t1 AT3G53200 60.377 106 42 0 21 126 6 111 1.09e-40 142
MS.gene058284.t1 AT1G57560 60.194 103 41 0 24 126 12 114 1.29e-40 144
MS.gene058284.t1 AT4G38620 62.376 101 38 0 26 126 14 114 1.44e-40 143
MS.gene058284.t1 AT2G47460 59.813 107 43 0 20 126 8 114 1.45e-40 145
MS.gene058284.t1 AT5G40330 53.509 114 53 0 13 126 1 114 1.57e-40 141
MS.gene058284.t1 AT1G57560 60.194 103 41 0 24 126 12 114 1.57e-40 143
MS.gene058284.t1 AT3G13890 56.311 103 45 0 24 126 12 114 1.63e-40 145
MS.gene058284.t1 AT1G79180 54.955 111 50 0 20 130 10 120 2.02e-40 143
MS.gene058284.t1 AT5G14750 56.731 104 45 0 23 126 15 118 2.04e-40 140
MS.gene058284.t1 AT5G07700 57.282 103 44 0 24 126 12 114 2.09e-40 144
MS.gene058284.t1 AT5G07700 57.282 103 44 0 24 126 12 114 2.09e-40 144
MS.gene058284.t1 AT5G61420 57.282 103 44 0 24 126 12 114 3.65e-40 144
MS.gene058284.t1 AT1G06180 52.893 121 57 0 20 140 8 128 4.95e-40 141
MS.gene058284.t1 AT1G66230 52.174 115 55 0 20 134 8 122 5.88e-40 142
MS.gene058284.t1 AT3G11440 54.369 103 47 0 24 126 41 143 5.90e-40 146
MS.gene058284.t1 AT3G47600 51.282 117 55 1 20 134 8 124 6.66e-40 143
MS.gene058284.t1 AT3G61250 50.833 120 59 0 20 139 8 127 7.92e-40 142
MS.gene058284.t1 AT2G31180 57.944 107 45 0 20 126 8 114 8.37e-40 140
MS.gene058284.t1 AT5G26660 54.955 111 50 0 24 134 12 122 8.51e-40 143
MS.gene058284.t1 AT1G56160 57.009 107 46 0 20 126 10 116 8.54e-40 142
MS.gene058284.t1 AT5G60890 55.652 115 51 0 21 135 9 123 9.37e-40 142
MS.gene058284.t1 AT5G16600 52.174 115 55 0 20 134 8 122 1.05e-39 142
MS.gene058284.t1 AT3G27920 56.731 104 45 0 23 126 13 116 1.69e-39 139
MS.gene058284.t1 AT4G26930 55.140 107 48 0 24 130 19 125 1.84e-39 143
MS.gene058284.t1 AT4G17785 35.521 259 145 6 19 266 8 255 3.02e-39 142
MS.gene058284.t1 AT3G11440 52.830 106 50 0 24 129 41 146 3.43e-39 145
MS.gene058284.t1 AT3G11440 52.830 106 50 0 24 129 41 146 3.43e-39 145
MS.gene058284.t1 AT3G11440 52.830 106 50 0 24 129 41 146 3.43e-39 145
MS.gene058284.t1 AT4G17785 35.521 259 145 6 19 266 8 255 4.26e-39 142
MS.gene058284.t1 AT5G49330 57.944 107 45 0 20 126 8 114 4.34e-39 141
MS.gene058284.t1 AT5G35550 61.538 104 40 0 23 126 13 116 4.37e-39 139
MS.gene058284.t1 AT5G06100 53.774 106 49 0 24 129 32 137 4.91e-39 143
MS.gene058284.t1 AT1G63910 56.075 107 47 0 24 130 12 118 8.87e-39 141
MS.gene058284.t1 AT3G62610 57.009 107 46 0 20 126 8 114 8.94e-39 140
MS.gene058284.t1 AT3G08500 58.491 106 44 0 24 129 30 135 1.29e-38 140
MS.gene058284.t1 AT2G32460 51.887 106 51 0 24 129 18 123 2.04e-38 142
MS.gene058284.t1 AT5G06100 53.774 106 49 0 24 129 32 137 2.08e-38 143
MS.gene058284.t1 AT5G06100 53.774 106 49 0 24 129 32 137 2.08e-38 143
MS.gene058284.t1 AT5G06100 53.774 106 49 0 24 129 32 137 2.08e-38 143
MS.gene058284.t1 AT5G06100 53.774 106 49 0 24 129 32 137 2.08e-38 143
MS.gene058284.t1 AT2G32460 51.887 106 51 0 24 129 6 111 2.16e-38 142
MS.gene058284.t1 AT5G62320 48.872 133 61 1 20 145 9 141 3.31e-38 136
MS.gene058284.t1 AT5G55020 51.327 113 55 0 18 130 20 132 4.74e-38 142
MS.gene058284.t1 AT5G52600 56.311 103 45 0 24 126 12 114 1.03e-37 134
MS.gene058284.t1 AT5G62470 50.000 112 56 0 20 131 8 119 1.04e-37 138
MS.gene058284.t1 AT1G74080 57.282 103 44 0 24 126 12 114 1.06e-37 137
MS.gene058284.t1 AT5G12870 51.852 108 52 0 24 131 18 125 1.23e-37 135
MS.gene058284.t1 AT3G13890 51.786 112 45 1 24 126 12 123 1.64e-37 137
MS.gene058284.t1 AT1G08810 46.032 126 68 0 20 145 8 133 1.87e-37 135
MS.gene058284.t1 AT1G74650 49.558 113 57 0 20 132 8 120 1.88e-37 136
MS.gene058284.t1 AT3G12720 51.456 103 50 0 24 126 22 124 2.74e-37 135
MS.gene058284.t1 AT4G01680 56.311 103 45 0 24 126 12 114 4.38e-37 133
MS.gene058284.t1 AT4G01680 56.311 103 45 0 24 126 12 114 7.57e-37 135
MS.gene058284.t1 AT2G26960 50.442 113 52 1 18 126 10 122 2.63e-36 135
MS.gene058284.t1 AT3G28910 49.565 115 58 0 20 134 8 122 6.62e-36 132
MS.gene058284.t1 AT5G62470 50.000 112 55 1 20 131 8 118 8.77e-36 132
MS.gene058284.t1 AT4G37780 53.704 108 49 1 20 126 8 115 9.70e-36 131
MS.gene058284.t1 AT1G74430 53.398 103 48 0 24 126 12 114 4.10e-35 129
MS.gene058284.t1 AT5G56110 49.593 123 61 1 23 144 11 133 4.10e-35 130
MS.gene058284.t1 AT4G25560 53.922 102 47 0 25 126 11 112 5.54e-35 129
MS.gene058284.t1 AT3G49690 53.704 108 49 1 20 126 8 115 1.29e-34 129
MS.gene058284.t1 AT3G12820 53.271 107 50 0 20 126 10 116 1.38e-34 127
MS.gene058284.t1 AT3G48920 50.980 102 50 0 25 126 19 120 1.90e-34 127
MS.gene058284.t1 AT5G57620 52.778 108 50 1 20 126 8 115 2.66e-34 128
MS.gene058284.t1 AT3G28470 50.485 103 51 0 20 122 8 110 2.82e-34 128
MS.gene058284.t1 AT5G52260 55.882 102 45 0 25 126 13 114 3.42e-34 126
MS.gene058284.t1 AT5G23000 51.852 108 51 1 20 126 8 115 3.42e-34 128
MS.gene058284.t1 AT1G79180 42.361 144 50 1 20 130 10 153 6.73e-34 127
MS.gene058284.t1 AT2G36890 53.704 108 49 1 20 126 8 115 8.86e-34 126
MS.gene058284.t1 AT5G65790 48.000 125 60 2 20 143 8 128 1.05e-33 127
MS.gene058284.t1 AT2G36890 53.704 108 49 1 20 126 49 156 1.80e-33 126
MS.gene058284.t1 AT4G01680 49.153 118 48 1 24 129 12 129 1.83e-33 126
MS.gene058284.t1 AT3G46130 64.634 82 29 0 55 136 8 89 3.55e-33 122
MS.gene058284.t1 AT5G59780 68.421 76 24 0 57 132 20 95 7.46e-33 121
MS.gene058284.t1 AT3G46130 66.250 80 27 0 57 136 20 99 1.11e-32 121
MS.gene058284.t1 AT1G66370 50.000 110 55 0 24 133 8 117 2.84e-32 120
MS.gene058284.t1 AT3G60460 44.545 110 60 1 23 131 10 119 8.19e-32 121
MS.gene058284.t1 AT1G18710 49.515 103 52 0 24 126 12 114 5.92e-31 118
MS.gene058284.t1 AT3G53200 67.143 70 23 0 57 126 9 78 3.36e-29 111
MS.gene058284.t1 AT1G66380 53.398 103 48 0 24 126 8 110 3.90e-28 106
MS.gene058284.t1 AT1G56650 40.116 172 101 2 24 195 8 177 4.29e-28 109
MS.gene058284.t1 AT5G26660 58.974 78 32 0 57 134 14 91 2.83e-27 109
MS.gene058284.t1 AT1G66390 53.398 103 48 0 24 126 8 110 5.36e-27 107
MS.gene058284.t1 AT5G35550 63.158 76 28 0 51 126 44 119 1.32e-26 106
MS.gene058284.t1 AT3G47600 57.500 80 32 1 57 134 39 118 8.32e-26 105
MS.gene058284.t1 AT5G11050 38.519 135 75 3 26 154 105 237 1.05e-25 106
MS.gene058284.t1 AT2G26950 39.640 111 63 1 17 123 5 115 2.10e-25 105
MS.gene058284.t1 AT5G11510 43.269 104 58 1 23 126 78 180 2.88e-25 107
MS.gene058284.t1 AT5G11510 43.269 104 58 1 23 126 78 180 2.88e-25 107
MS.gene058284.t1 AT5G11510 43.269 104 58 1 23 126 78 180 2.88e-25 107
MS.gene058284.t1 AT5G11510 43.269 104 58 1 23 126 78 180 3.39e-25 106
MS.gene058284.t1 AT5G11510 43.269 104 58 1 23 126 78 180 3.47e-25 106
MS.gene058284.t1 AT3G09370 41.121 107 62 1 23 129 132 237 7.37e-25 105
MS.gene058284.t1 AT3G09370 41.121 107 62 1 23 129 127 232 7.61e-25 105
MS.gene058284.t1 AT3G09370 41.121 107 62 1 23 129 140 245 9.83e-25 104
MS.gene058284.t1 AT5G14750 62.687 67 25 0 60 126 18 84 1.24e-24 98.6
MS.gene058284.t1 AT3G12820 64.179 67 24 0 60 126 2 68 1.33e-24 99.0
MS.gene058284.t1 AT5G58850 38.525 122 68 2 23 138 102 222 1.99e-24 103
MS.gene058284.t1 AT3G27785 41.667 108 61 2 26 132 189 295 2.44e-24 103
MS.gene058284.t1 AT5G02320 41.346 104 60 1 23 126 124 226 3.01e-24 103
MS.gene058284.t1 AT5G02320 41.346 104 60 1 23 126 124 226 3.01e-24 103
MS.gene058284.t1 AT5G02320 41.346 104 60 1 23 126 64 166 5.95e-24 102
MS.gene058284.t1 AT4G18770 40.000 110 65 1 24 133 215 323 6.39e-24 101
MS.gene058284.t1 AT2G23290 42.593 108 61 1 21 128 8 114 1.15e-23 99.4
MS.gene058284.t1 AT4G32730 38.462 104 63 1 23 126 84 186 8.36e-23 99.8
MS.gene058284.t1 AT4G32730 38.462 104 63 1 23 126 84 186 8.36e-23 99.8
MS.gene058284.t1 AT4G32730 38.462 104 63 1 23 126 84 186 8.36e-23 99.8
MS.gene058284.t1 AT4G32730 38.462 104 63 1 23 126 84 186 8.36e-23 99.8
MS.gene058284.t1 AT4G32730 38.462 104 63 1 23 126 84 186 1.14e-22 99.4
MS.gene058284.t1 AT4G37260 39.823 113 62 2 26 138 13 119 5.26e-22 94.7
MS.gene058284.t1 AT5G67300 33.974 156 94 3 23 178 3 149 7.70e-22 94.4
MS.gene058284.t1 AT2G39880 38.971 136 79 3 26 160 50 182 1.01e-21 94.7
MS.gene058284.t1 AT3G55730 40.566 106 62 1 26 131 56 160 2.35e-21 94.0
MS.gene058284.t1 AT3G09230 43.269 104 58 1 23 126 52 154 5.68e-21 92.8
MS.gene058284.t1 AT1G17950 41.905 105 60 1 26 130 5 108 5.95e-21 90.5
MS.gene058284.t1 AT1G69560 40.000 105 62 1 26 130 107 210 6.36e-21 92.0
MS.gene058284.t1 AT1G69560 40.000 105 62 1 26 130 123 226 6.39e-21 92.4
MS.gene058284.t1 AT3G29020 40.000 105 62 1 26 130 65 168 8.81e-21 89.7
MS.gene058284.t1 AT3G29020 40.000 105 62 1 26 130 67 170 1.17e-20 90.9
MS.gene058284.t1 AT1G26780 39.252 107 64 1 24 130 96 201 1.37e-20 91.7
MS.gene058284.t1 AT1G26780 42.424 99 56 1 24 122 96 193 1.91e-20 89.7
MS.gene058284.t1 AT5G17800 40.541 111 59 2 26 130 93 202 2.12e-20 90.5
MS.gene058284.t1 AT5G40360 36.364 110 68 2 24 132 156 264 5.62e-20 89.7
MS.gene058284.t1 AT3G50060 37.736 106 65 1 23 128 3 107 7.78e-20 88.6
MS.gene058284.t1 AT1G22640 56.338 71 31 0 70 140 1 71 8.43e-20 86.3
MS.gene058284.t1 AT1G73410 42.857 105 59 1 26 130 6 109 1.16e-19 87.0
MS.gene058284.t1 AT1G73410 42.857 105 59 1 26 130 6 109 2.04e-19 85.5
MS.gene058284.t1 AT2G25230 40.566 106 59 2 23 125 23 127 2.21e-19 85.9
MS.gene058284.t1 AT3G23250 35.537 121 74 1 70 190 1 117 2.70e-19 85.5
MS.gene058284.t1 AT1G66380 58.571 70 29 0 57 126 8 77 1.30e-18 80.5
MS.gene058284.t1 AT4G33450 38.679 106 64 1 25 130 18 122 1.80e-18 84.0
MS.gene058284.t1 AT5G39700 38.889 108 65 1 15 122 45 151 3.80e-18 81.6
MS.gene058284.t1 AT5G59780 66.667 51 17 0 82 132 1 51 4.21e-18 80.9
MS.gene058284.t1 AT3G46130 63.636 55 20 0 82 136 1 55 5.53e-18 81.3
MS.gene058284.t1 AT1G71030 39.000 100 60 1 48 147 5 103 1.98e-17 79.7
MS.gene058284.t1 AT1G14350 40.594 101 59 1 29 129 28 127 2.76e-17 82.8
MS.gene058284.t1 AT1G14350 40.594 101 59 1 29 129 28 127 2.76e-17 82.8
MS.gene058284.t1 AT5G14750 57.895 57 24 0 70 126 1 57 3.37e-17 77.4
MS.gene058284.t1 AT5G14750 57.895 57 24 0 70 126 1 57 3.37e-17 77.4
MS.gene058284.t1 AT2G37630 35.780 109 68 1 26 132 4 112 3.51e-17 81.6
MS.gene058284.t1 AT1G71030 42.353 85 49 0 63 147 5 89 3.61e-17 78.6
MS.gene058284.t1 AT1G66380 50.794 63 31 0 24 86 8 70 7.95e-17 75.5
MS.gene058284.t1 AT2G02820 33.333 162 93 4 15 166 17 173 1.13e-16 80.9
MS.gene058284.t1 AT2G02820 33.333 162 93 4 15 166 17 173 1.21e-16 80.9
MS.gene058284.t1 AT4G00540 36.036 111 67 2 24 131 101 210 1.29e-16 80.5
MS.gene058284.t1 AT4G00540 36.036 111 67 2 24 131 99 208 2.40e-16 79.7
MS.gene058284.t1 AT2G02820 33.333 162 93 4 15 166 17 173 2.91e-16 79.0
MS.gene058284.t1 AT1G18960 32.110 109 71 2 26 134 10 115 3.84e-16 78.2
MS.gene058284.t1 AT5G40430 36.792 106 62 3 23 125 51 154 3.97e-15 74.3
MS.gene058284.t1 AT4G25560 60.000 45 18 0 82 126 2 46 9.46e-13 67.0
MS.gene058284.t1 AT1G14350 44.444 63 35 0 68 130 23 85 6.41e-11 63.2
MS.gene058284.t1 AT1G14350 44.444 63 35 0 68 130 23 85 6.41e-11 63.2

Find 87 sgRNAs with CRISPR-Local

Find 124 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGTAAGTATTGTGCAATTT+TGG 0.168994 2.2:+55557475 None:intergenic
TGTTGGTAATAATCAGAATT+AGG 0.176139 2.2:+55556984 None:intergenic
TACCAACAAGCTCAGCAATT+TGG 0.199585 2.2:-55556969 MS.gene058284:CDS
GGGACACATCTGACAATTTC+TGG 0.217259 2.2:-55556860 MS.gene058284:CDS
ATCTCGTTGTCTGTTCTTCC+CGG 0.266163 2.2:+55557455 None:intergenic
ACAACGAGATCAAGAATTAT+TGG 0.314777 2.2:-55557442 MS.gene058284:CDS
CCTTGAATCCAAGGAGTGTT+TGG 0.318256 2.2:+55556882 None:intergenic
ACCAACAAGCTCAGCAATTT+GGG 0.318446 2.2:-55556968 MS.gene058284:CDS
GCTGCATCATCGGATTCATT+TGG 0.322005 2.2:-55557083 MS.gene058284:CDS
GGTGGCTCGGGTGGCGGAGG+TGG 0.323196 2.2:+55557298 None:intergenic
TGGCGCCGCGGCTGCATCAT+CGG 0.345089 2.2:-55557093 MS.gene058284:CDS
GTTGGTAATAATCAGAATTA+GGG 0.353037 2.2:+55556985 None:intergenic
ATCTGGATTGTTCCCTCAAA+TGG 0.353663 2.2:-55556922 MS.gene058284:CDS
CCTTTGGATGCCAAGGTTAG+TGG 0.355811 2.2:-55557342 MS.gene058284:CDS
TACGTCACATTTGAGTTGTT+TGG 0.355884 2.2:+55557397 None:intergenic
TTCATAGTCGTTGGGGAAAC+CGG 0.357053 2.2:-55557776 MS.gene058284:intron
CGAGCCACCGCCACTAATAA+TGG 0.357709 2.2:-55557284 MS.gene058284:CDS
CAAAATTGCACAATACTTAC+CGG 0.367480 2.2:-55557474 MS.gene058284:CDS
ATGTTACCACGACGAACATC+TGG 0.367650 2.2:+55557831 None:intergenic
GATTGCATCACTAGCCCATC+TGG 0.373109 2.2:-55556939 MS.gene058284:CDS
CTGCATCATCGGATTCATTT+GGG 0.373323 2.2:-55557082 MS.gene058284:CDS
GGCGGTGGCTCGGGTGGCGG+AGG 0.377228 2.2:+55557295 None:intergenic
AAGATGCCATGCGCTACCTT+TGG 0.397038 2.2:-55557358 MS.gene058284:CDS
CATTATTAGTGGCGGTGGCT+CGG 0.400688 2.2:+55557285 None:intergenic
ACCCAAATTGCTGAGCTTGT+TGG 0.406996 2.2:+55556967 None:intergenic
TGTTGGTGTTCATAATTGTT+GGG 0.412586 2.2:+55557168 None:intergenic
CCAAGGAGTGTTTGGTTCCA+TGG 0.416961 2.2:+55556890 None:intergenic
CCAAACACTCCTTGGATTCA+AGG 0.418970 2.2:-55556882 MS.gene058284:CDS
TTCTTGAACTTCATAGTCGT+TGG 0.421499 2.2:-55557785 MS.gene058284:CDS
TCTTGAACTTCATAGTCGTT+GGG 0.421944 2.2:-55557784 MS.gene058284:CDS
ATCAATTACATTGCAAATCA+TGG 0.428806 2.2:-55558539 MS.gene058284:CDS
TCGGGTGGCGGAGGTGGATG+CGG 0.434916 2.2:+55557304 None:intergenic
AGTGGCGGTGGCTCGGGTGG+CGG 0.441443 2.2:+55557292 None:intergenic
ATTATTAGTGGCGGTGGCTC+GGG 0.451809 2.2:+55557286 None:intergenic
ATTTCAATATTTCATGGAAG+TGG 0.456263 2.2:-55558663 None:intergenic
TATTGTTGTTACTACCAACT+TGG 0.458463 2.2:+55557012 None:intergenic
CCATGGAACCAAACACTCCT+TGG 0.463876 2.2:-55556890 MS.gene058284:CDS
TCTTGAGTCAATTCCGAGAC+AGG 0.470088 2.2:+55557047 None:intergenic
GTTATAGGACTCAAACGAAC+GGG 0.473603 2.2:-55557891 MS.gene058284:intron
CGGAGGTGGATGCGGCAGCT+TGG 0.476078 2.2:+55557312 None:intergenic
TATGTTATATGTCGTATTGT+TGG 0.476207 2.2:+55557232 None:intergenic
TCAAATGGATTTCAGTTCCA+TGG 0.479194 2.2:-55556907 MS.gene058284:CDS
ACTTGGTGAACCATTATTAG+TGG 0.482800 2.2:+55557274 None:intergenic
CTGTTGGTGTTCATAATTGT+TGG 0.485187 2.2:+55557167 None:intergenic
AACACTCTTGCTCGTTCAGC+TGG 0.485635 2.2:-55558503 MS.gene058284:intron
GACACAAGTTTCGCCTGTCT+CGG 0.486609 2.2:-55557060 MS.gene058284:CDS
GCGCCATTGCTACTATTCTC+TGG 0.490228 2.2:+55557110 None:intergenic
ATGAACACCAACAGTTTATG+TGG 0.492470 2.2:-55557158 MS.gene058284:CDS
ATGGAACTGAAATCCATTTG+AGG 0.515326 2.2:+55556909 None:intergenic
GTTATATGTCGTATTGTTGG+TGG 0.520096 2.2:+55557235 None:intergenic
TGAACCATTATTAGTGGCGG+TGG 0.522243 2.2:+55557280 None:intergenic
CAAATCATGGTGAAGGTCGA+TGG 0.524948 2.2:-55558526 MS.gene058284:CDS
GATCCAACTCATCATCACTT+TGG 0.528166 2.2:+55558603 None:intergenic
CTCATCATCACTTTGGAGCA+TGG 0.530302 2.2:+55558610 None:intergenic
TGGAACTGAAATCCATTTGA+GGG 0.531486 2.2:+55556910 None:intergenic
TGCGCTACCTTTGGATGCCA+AGG 0.532069 2.2:-55557349 MS.gene058284:CDS
CAAACACTCCTTGGATTCAA+GGG 0.533991 2.2:-55556881 MS.gene058284:CDS
AGATCTTCATCGACGGTCCA+TGG 0.536902 2.2:+55558569 None:intergenic
ATTAGTGGCGGTGGCTCGGG+TGG 0.538647 2.2:+55557289 None:intergenic
GATTATTACAATGTCCAAGT+TGG 0.548318 2.2:-55557026 MS.gene058284:CDS
CTTGAACTTCATAGTCGTTG+GGG 0.553574 2.2:-55557783 MS.gene058284:CDS
TACATTGCAAATCATGGTGA+AGG 0.554565 2.2:-55558533 MS.gene058284:CDS
GATGTGTCCCCTTGAATCCA+AGG 0.564896 2.2:+55556873 None:intergenic
CAATATTTCATGGAAGTGGA+AGG 0.568241 2.2:-55558659 None:intergenic
GTGACCGCTGCTGTACCACT+TGG 0.578470 2.2:+55557257 None:intergenic
CCACTAACCTTGGCATCCAA+AGG 0.583224 2.2:+55557342 None:intergenic
GCTCCAAAGTGATGATGAGT+TGG 0.588477 2.2:-55558606 MS.gene058284:CDS
TGGATGCGCTCCACTAACCT+TGG 0.601618 2.2:+55557332 None:intergenic
ACTAATAATGGTTCACCAAG+TGG 0.601663 2.2:-55557272 MS.gene058284:CDS
GTTGGTGTTCATAATTGTTG+GGG 0.602853 2.2:+55557169 None:intergenic
ACTCCAGAGAATAGTAGCAA+TGG 0.604297 2.2:-55557113 MS.gene058284:CDS
ATTTGAGGGAACAATCCAGA+TGG 0.604631 2.2:+55556924 None:intergenic
TGAATCCGATGATGCAGCCG+CGG 0.612957 2.2:+55557088 None:intergenic
TGTTATAGGACTCAAACGAA+CGG 0.615232 2.2:-55557892 MS.gene058284:intron
GCAAGAGCTGTAGATTGAGA+TGG 0.621101 2.2:-55557869 MS.gene058284:CDS
TGGCATCCAAAGGTAGCGCA+TGG 0.621698 2.2:+55557352 None:intergenic
AAAATTGCACAATACTTACC+GGG 0.631573 2.2:-55557473 MS.gene058284:CDS
TGGATCTTCGAAGAGGACCA+TGG 0.638658 2.2:-55558586 MS.gene058284:CDS
TTTGAGGGAACAATCCAGAT+GGG 0.640469 2.2:+55556925 None:intergenic
TGGTGAACCATTATTAGTGG+CGG 0.649612 2.2:+55557277 None:intergenic
GAGAGCAAGATCTTCATCGA+CGG 0.650210 2.2:+55558562 None:intergenic
AAACACTCCTTGGATTCAAG+GGG 0.650871 2.2:-55556880 MS.gene058284:CDS
GAATAGTAGCAATGGCGCCG+CGG 0.659766 2.2:-55557105 MS.gene058284:CDS
CTTCGTCCAGATGTTCGTCG+TGG 0.664020 2.2:-55557837 MS.gene058284:CDS
TTCACCAAGTGGTACAGCAG+CGG 0.669756 2.2:-55557261 MS.gene058284:CDS
ATGTGAACCACATAAACTGT+TGG 0.680313 2.2:+55557151 None:intergenic
GATGAGTTGGATCTTCGAAG+AGG 0.682976 2.2:-55558593 MS.gene058284:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAACTATATATTTATATTA+TGG - chr2.2:55557043-55557062 MS.gene058284:CDS 10.0%
!!! TTTTTTACTTTATTTAATAC+GGG + chr2.2:55557477-55557496 None:intergenic 10.0%
!! AAAAACAAAATTTCTTCAAT+TGG + chr2.2:55557554-55557573 None:intergenic 15.0%
!!! AGAAATTTTGTTTTTGTTAT+AGG - chr2.2:55557559-55557578 MS.gene058284:intron 15.0%
!!! GTATATTTTTCTAGTTTTTA+TGG - chr2.2:55557010-55557029 MS.gene058284:CDS 15.0%
!!! TCTTTCTAATTTTAAAATGT+TGG - chr2.2:55557920-55557939 MS.gene058284:intron 15.0%
!!! TTTCTGTCTTTAATTTATTT+TGG - chr2.2:55557889-55557908 MS.gene058284:intron 15.0%
!! ATGAAATACCATATAACTAT+AGG - chr2.2:55557356-55557375 MS.gene058284:CDS 20.0%
!! CAATTAGAATACTTAAGTTA+TGG - chr2.2:55557767-55557786 MS.gene058284:intron 20.0%
!! CTAGTTAATTTCTATAATTG+TGG - chr2.2:55557152-55557171 MS.gene058284:CDS 20.0%
!! GGGCATAAATAAATTAATTA+TGG - chr2.2:55557331-55557350 MS.gene058284:CDS 20.0%
!! TATTTGATTGATCAATTAGA+TGG - chr2.2:55557966-55557985 MS.gene058284:intron 20.0%
! AAATACCATATAACTATAGG+TGG - chr2.2:55557359-55557378 MS.gene058284:CDS 25.0%
! ATCAATTACATTGCAAATCA+TGG - chr2.2:55556926-55556945 MS.gene058284:CDS 25.0%
! CTAACATAATCACTATCATA+TGG + chr2.2:55557271-55557290 None:intergenic 25.0%
! CTAATATTTAACGACGAATT+TGG + chr2.2:55557838-55557857 None:intergenic 25.0%
! TATGTTATATGTCGTATTGT+TGG + chr2.2:55558236-55558255 None:intergenic 25.0%
!!! GCTTTTTCCAAAAAATTGAT+TGG + chr2.2:55557216-55557235 None:intergenic 25.0%
!!! GTTGGTAATAATCAGAATTA+GGG + chr2.2:55558483-55558502 None:intergenic 25.0%
!!! TGTTGGTAATAATCAGAATT+AGG + chr2.2:55558484-55558503 None:intergenic 25.0%
AAAATTGCACAATACTTACC+GGG - chr2.2:55557992-55558011 MS.gene058284:intron 30.0%
AAGAAAAAAACCGCAAACTT+TGG + chr2.2:55557238-55557257 None:intergenic 30.0%
ACAACGAGATCAAGAATTAT+TGG - chr2.2:55558023-55558042 MS.gene058284:intron 30.0%
CAAAATTGCACAATACTTAC+CGG - chr2.2:55557991-55558010 MS.gene058284:intron 30.0%
GATTATTACAATGTCCAAGT+TGG - chr2.2:55558439-55558458 MS.gene058284:intron 30.0%
TATGCCTTATATTAAAGTCC+TGG + chr2.2:55557294-55557313 None:intergenic 30.0%
TTAGCCAGGACTTTAATATA+AGG - chr2.2:55557287-55557306 MS.gene058284:CDS 30.0%
TTCATGATTGCAATTGTTGA+TGG - chr2.2:55557080-55557099 MS.gene058284:CDS 30.0%
! TATTGTTGTTACTACCAACT+TGG + chr2.2:55558456-55558475 None:intergenic 30.0%
! TGTTGGTGTTCATAATTGTT+GGG + chr2.2:55558300-55558319 None:intergenic 30.0%
!!! CATCACACCAATCAATTTTT+TGG - chr2.2:55557206-55557225 MS.gene058284:CDS 30.0%
ACTAATAATGGTTCACCAAG+TGG - chr2.2:55558193-55558212 MS.gene058284:intron 35.0%
ATGAACACCAACAGTTTATG+TGG - chr2.2:55558307-55558326 MS.gene058284:intron 35.0%
ATGGAACTGAAATCCATTTG+AGG + chr2.2:55558559-55558578 None:intergenic 35.0%
ATGTGAACCACATAAACTGT+TGG + chr2.2:55558317-55558336 None:intergenic 35.0%
CAATCATGAAACAGCTATAG+TGG + chr2.2:55557070-55557089 None:intergenic 35.0%
GCAGCCAAGCAATTATATAT+GGG + chr2.2:55557385-55557404 None:intergenic 35.0%
GTTATATGTCGTATTGTTGG+TGG + chr2.2:55558233-55558252 None:intergenic 35.0%
TACATTGCAAATCATGGTGA+AGG - chr2.2:55556932-55556951 MS.gene058284:CDS 35.0%
TCTTGAACTTCATAGTCGTT+GGG - chr2.2:55557681-55557700 MS.gene058284:intron 35.0%
TGCAGCCAAGCAATTATATA+TGG + chr2.2:55557386-55557405 None:intergenic 35.0%
TGCATGTATCTATTGCTTAC+CGG + chr2.2:55557711-55557730 None:intergenic 35.0%
TGGAACTGAAATCCATTTGA+GGG + chr2.2:55558558-55558577 None:intergenic 35.0%
TGTTATAGGACTCAAACGAA+CGG - chr2.2:55557573-55557592 MS.gene058284:intron 35.0%
TTCTTGAACTTCATAGTCGT+TGG - chr2.2:55557680-55557699 MS.gene058284:intron 35.0%
TTGGAAAAAGCCAAAGTTTG+CGG - chr2.2:55557225-55557244 MS.gene058284:CDS 35.0%
! ACTTGGTGAACCATTATTAG+TGG + chr2.2:55558194-55558213 None:intergenic 35.0%
! CATAGCGTTGAAGAAAATAG+TGG + chr2.2:55557120-55557139 None:intergenic 35.0%
! CTGTTGGTGTTCATAATTGT+TGG + chr2.2:55558301-55558320 None:intergenic 35.0%
! GTTGGTGTTCATAATTGTTG+GGG + chr2.2:55558299-55558318 None:intergenic 35.0%
! TCAAATGGATTTCAGTTCCA+TGG - chr2.2:55558558-55558577 MS.gene058284:CDS 35.0%
! TGAGTTGTTTGGCATGTTTT+TGG + chr2.2:55558060-55558079 None:intergenic 35.0%
! TGATAGTGATTATGTTAGCC+AGG - chr2.2:55557273-55557292 MS.gene058284:CDS 35.0%
!! CGGTAAGTATTGTGCAATTT+TGG + chr2.2:55557993-55558012 None:intergenic 35.0%
!! TACGTCACATTTGAGTTGTT+TGG + chr2.2:55558071-55558090 None:intergenic 35.0%
AAACACTCCTTGGATTCAAG+GGG - chr2.2:55558585-55558604 MS.gene058284:CDS 40.0%
AAGGCATATACTTCTGTGTG+TGG - chr2.2:55557306-55557325 MS.gene058284:CDS 40.0%
ACCAACAAGCTCAGCAATTT+GGG - chr2.2:55558497-55558516 MS.gene058284:intron 40.0%
ACTCCAGAGAATAGTAGCAA+TGG - chr2.2:55558352-55558371 MS.gene058284:intron 40.0%
ATATACTTCTGTGTGTGGTG+GGG - chr2.2:55557311-55557330 MS.gene058284:CDS 40.0%
ATCTGGATTGTTCCCTCAAA+TGG - chr2.2:55558543-55558562 MS.gene058284:CDS 40.0%
ATGGGCCACCTATAGTTATA+TGG + chr2.2:55557367-55557386 None:intergenic 40.0%
ATTTGAGGGAACAATCCAGA+TGG + chr2.2:55558544-55558563 None:intergenic 40.0%
CAAACACTCCTTGGATTCAA+GGG - chr2.2:55558584-55558603 MS.gene058284:CDS 40.0%
CATATACTTCTGTGTGTGGT+GGG - chr2.2:55557310-55557329 MS.gene058284:CDS 40.0%
CTGCATCATCGGATTCATTT+GGG - chr2.2:55558383-55558402 MS.gene058284:intron 40.0%
CTTGAACTTCATAGTCGTTG+GGG - chr2.2:55557682-55557701 MS.gene058284:intron 40.0%
GATCCAACTCATCATCACTT+TGG + chr2.2:55556865-55556884 None:intergenic 40.0%
GTGGCCCATATATAATTGCT+TGG - chr2.2:55557378-55557397 MS.gene058284:CDS 40.0%
GTTATAGGACTCAAACGAAC+GGG - chr2.2:55557574-55557593 MS.gene058284:intron 40.0%
TACCAACAAGCTCAGCAATT+TGG - chr2.2:55558496-55558515 MS.gene058284:intron 40.0%
TGAAACAAGACGAGAAGTGA+AGG + chr2.2:55557188-55557207 None:intergenic 40.0%
TGGTGAACCATTATTAGTGG+CGG + chr2.2:55558191-55558210 None:intergenic 40.0%
TTTGAGGGAACAATCCAGAT+GGG + chr2.2:55558543-55558562 None:intergenic 40.0%
!!! GTTTGGCATGTTTTTGGACA+CGG + chr2.2:55558054-55558073 None:intergenic 40.0%
!!! TTTGGCATGTTTTTGGACAC+GGG + chr2.2:55558053-55558072 None:intergenic 40.0%
ACCCAAATTGCTGAGCTTGT+TGG + chr2.2:55558501-55558520 None:intergenic 45.0%
ATCTCGTTGTCTGTTCTTCC+CGG + chr2.2:55558013-55558032 None:intergenic 45.0%
ATGTTACCACGACGAACATC+TGG + chr2.2:55557637-55557656 None:intergenic 45.0%
CAAATCATGGTGAAGGTCGA+TGG - chr2.2:55556939-55556958 MS.gene058284:CDS 45.0%
CCAAACACTCCTTGGATTCA+AGG - chr2.2:55558583-55558602 MS.gene058284:CDS 45.0%
GAGAGCAAGATCTTCATCGA+CGG + chr2.2:55556906-55556925 None:intergenic 45.0%
GCAAGAGCTGTAGATTGAGA+TGG - chr2.2:55557596-55557615 MS.gene058284:intron 45.0%
GCATATACTTCTGTGTGTGG+TGG - chr2.2:55557309-55557328 MS.gene058284:CDS 45.0%
GCTGCATCATCGGATTCATT+TGG - chr2.2:55558382-55558401 MS.gene058284:intron 45.0%
GGGACACATCTGACAATTTC+TGG - chr2.2:55558605-55558624 MS.gene058284:CDS 45.0%
TCTTGAGTCAATTCCGAGAC+AGG + chr2.2:55558421-55558440 None:intergenic 45.0%
TGAACCATTATTAGTGGCGG+TGG + chr2.2:55558188-55558207 None:intergenic 45.0%
TTCATAGTCGTTGGGGAAAC+CGG - chr2.2:55557689-55557708 MS.gene058284:intron 45.0%
! GATGAGTTGGATCTTCGAAG+AGG - chr2.2:55556872-55556891 MS.gene058284:CDS 45.0%
! GCTCCAAAGTGATGATGAGT+TGG - chr2.2:55556859-55556878 MS.gene058284:CDS 45.0%
!! CCTTGAATCCAAGGAGTGTT+TGG + chr2.2:55558586-55558605 None:intergenic 45.0%
!! CTCATCATCACTTTGGAGCA+TGG + chr2.2:55556858-55556877 None:intergenic 45.0%
!!! TTTTTTTACTTTATTTAATA+CGG + chr2.2:55557478-55557497 None:intergenic 5.0%
AACACTCTTGCTCGTTCAGC+TGG - chr2.2:55556962-55556981 MS.gene058284:CDS 50.0%
AAGATGCCATGCGCTACCTT+TGG - chr2.2:55558107-55558126 MS.gene058284:intron 50.0%
AGATCTTCATCGACGGTCCA+TGG + chr2.2:55556899-55556918 None:intergenic 50.0%
ATTATTAGTGGCGGTGGCTC+GGG + chr2.2:55558182-55558201 None:intergenic 50.0%
CATTATTAGTGGCGGTGGCT+CGG + chr2.2:55558183-55558202 None:intergenic 50.0%
CCACTAACCTTGGCATCCAA+AGG + chr2.2:55558126-55558145 None:intergenic 50.0%
CCATGGAACCAAACACTCCT+TGG - chr2.2:55558575-55558594 MS.gene058284:CDS 50.0%
CCTTTGGATGCCAAGGTTAG+TGG - chr2.2:55558123-55558142 MS.gene058284:intron 50.0%
GACACAAGTTTCGCCTGTCT+CGG - chr2.2:55558405-55558424 MS.gene058284:intron 50.0%
GATGTGTCCCCTTGAATCCA+AGG + chr2.2:55558595-55558614 None:intergenic 50.0%
GATTGCATCACTAGCCCATC+TGG - chr2.2:55558526-55558545 MS.gene058284:CDS 50.0%
GCGCCATTGCTACTATTCTC+TGG + chr2.2:55558358-55558377 None:intergenic 50.0%
TGGATCTTCGAAGAGGACCA+TGG - chr2.2:55556879-55556898 MS.gene058284:CDS 50.0%
TTCACCAAGTGGTACAGCAG+CGG - chr2.2:55558204-55558223 MS.gene058284:intron 50.0%
!! CCAAGGAGTGTTTGGTTCCA+TGG + chr2.2:55558578-55558597 None:intergenic 50.0%
CGAGCCACCGCCACTAATAA+TGG - chr2.2:55558181-55558200 MS.gene058284:intron 55.0%
CTTCGTCCAGATGTTCGTCG+TGG - chr2.2:55557628-55557647 MS.gene058284:intron 55.0%
GAATAGTAGCAATGGCGCCG+CGG - chr2.2:55558360-55558379 MS.gene058284:intron 55.0%
TGAATCCGATGATGCAGCCG+CGG + chr2.2:55558380-55558399 None:intergenic 55.0%
TGCGCTACCTTTGGATGCCA+AGG - chr2.2:55558116-55558135 MS.gene058284:intron 55.0%
TGGATGCGCTCCACTAACCT+TGG + chr2.2:55558136-55558155 None:intergenic 55.0%
TGGCATCCAAAGGTAGCGCA+TGG + chr2.2:55558116-55558135 None:intergenic 55.0%
GTGACCGCTGCTGTACCACT+TGG + chr2.2:55558211-55558230 None:intergenic 60.0%
! ATTAGTGGCGGTGGCTCGGG+TGG + chr2.2:55558179-55558198 None:intergenic 65.0%
CGGAGGTGGATGCGGCAGCT+TGG + chr2.2:55558156-55558175 None:intergenic 70.0%
TGGCGCCGCGGCTGCATCAT+CGG - chr2.2:55558372-55558391 MS.gene058284:intron 70.0%
!! TCGGGTGGCGGAGGTGGATG+CGG + chr2.2:55558164-55558183 None:intergenic 70.0%
! AGTGGCGGTGGCTCGGGTGG+CGG + chr2.2:55558176-55558195 None:intergenic 75.0%
!!! GGTGGCTCGGGTGGCGGAGG+TGG + chr2.2:55558170-55558189 None:intergenic 80.0%
!! GGCGGTGGCTCGGGTGGCGG+AGG + chr2.2:55558173-55558192 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 55556815 55558672 55556815 ID=MS.gene058284
chr2.2 mRNA 55556815 55558672 55556815 ID=MS.gene058284.t1;Parent=MS.gene058284
chr2.2 exon 55558504 55558672 55558504 ID=MS.gene058284.t1.exon1;Parent=MS.gene058284.t1
chr2.2 CDS 55558504 55558672 55558504 ID=cds.MS.gene058284.t1;Parent=MS.gene058284.t1
chr2.2 exon 55557777 55557906 55557777 ID=MS.gene058284.t1.exon2;Parent=MS.gene058284.t1
chr2.2 CDS 55557777 55557906 55557777 ID=cds.MS.gene058284.t1;Parent=MS.gene058284.t1
chr2.2 exon 55556815 55557502 55556815 ID=MS.gene058284.t1.exon3;Parent=MS.gene058284.t1
chr2.2 CDS 55556815 55557502 55556815 ID=cds.MS.gene058284.t1;Parent=MS.gene058284.t1
Gene Sequence

>MS.gene058284

ATGGAAGTGGAAGGAAGTGTAATAAGCAACTCGAACATCACCATGCTCCAAAGTGATGATGAGTTGGATCTTCGAAGAGGACCATGGACCGTCGATGAAGATCTTGCTCTCATCAATTACATTGCAAATCATGGTGAAGGTCGATGGAACACTCTTGCTCGTTCAGCTGGTAATTCATAACTTTTTTTCTTTCATGTATATTTTTCTAGTTTTTATGGAAGAATAATAAGAACTATATATTTATATTATGGACCACTATAGCTGTTTCATGATTGCAATTGTTGATGGAAAATCATATACTTCCACTATTTTCTTCAACGCTATGCTTGATTTCTAGCTAGTTAATTTCTATAATTGTGGTGTGAAAGCTCCTTCACTTCTCGTCTTGTTTCATCACACCAATCAATTTTTTGGAAAAAGCCAAAGTTTGCGGTTTTTTTCTTATGAAGAGCACCATATGATAGTGATTATGTTAGCCAGGACTTTAATATAAGGCATATACTTCTGTGTGTGGTGGGGCATAAATAAATTAATTATGGAAATGAAATACCATATAACTATAGGTGGCCCATATATAATTGCTTGGCTGCATCACGTTTATGAAAATAGAAAAGAATAATGAATTTGAATTTGATACTACAACGCAATATCATATATTTCCCGTATTAAATAAAGTAAAAAAAATTTGCTCTTTATTTTACTTGATTTGTTTTTGCTTGCATTCTTGAAAACTTTACCAATTGAAGAAATTTTGTTTTTGTTATAGGACTCAAACGAACGGGCAAGAGCTGTAGATTGAGATGGTTGAATTATCTTCGTCCAGATGTTCGTCGTGGTAACATCACACTTGAAGAACAACTTCTTATTCTTGAACTTCATAGTCGTTGGGGAAACCGGTAAGCAATAGATACATGCATACAAACATACACATCAAAGTTATATTATTTTGTTGCAATTAGAATACTTAAGTTATGGACTAAAATTTATTATTACAGAAAAAGAAGAAAAAAAAAAATCTTTCCAAATTCGTCGTTAAATATTAGAGACGCGAAATAAGAAATAAATTTCATTTTTTTTCTGTCTTTAATTTATTTTGGTAATTTAATCTTTCTAATTTTAAAATGTTGGTTAAATTATTGTGTCTAATTAATTATTTGATTGATCAATTAGATGGTCCAAAATTGCACAATACTTACCGGGAAGAACAGACAACGAGATCAAGAATTATTGGAGAACCCGTGTCCAAAAACATGCCAAACAACTCAAATGTGACGTAAACAGTAAGCAATTCAAAGATGCCATGCGCTACCTTTGGATGCCAAGGTTAGTGGAGCGCATCCAAGCTGCCGCATCCACCTCCGCCACCCGAGCCACCGCCACTAATAATGGTTCACCAAGTGGTACAGCAGCGGTCACCACCAACAATACGACATATAACATAAACAACAATTTTGATGTTCATAGTAGCGTGAACATGTTAACCCCAACAATTATGAACACCAACAGTTTATGTGGTTCACATGTTACACAACGTTATACTCCAGAGAATAGTAGCAATGGCGCCGCGGCTGCATCATCGGATTCATTTGGGACACAAGTTTCGCCTGTCTCGGAATTGACTCAAGATTATTACAATGTCCAAGTTGGTAGTAACAACAATAATAACCCTAATTCTGATTATTACCAACAAGCTCAGCAATTTGGGTTTTTTGATTGCATCACTAGCCCATCTGGATTGTTCCCTCAAATGGATTTCAGTTCCATGGAACCAAACACTCCTTGGATTCAAGGGGACACATCTGACAATTTCTGGAATGTTGAAAACATGTTACTCTTTCAACATCTCAATGACATGTGA
Protein sequence

>MS.gene058284.t1

MEVEGSVISNSNITMLQSDDELDLRRGPWTVDEDLALINYIANHGEGRWNTLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDAMRYLWMPRLVERIQAAASTSATRATATNNGSPSGTAAVTTNNTTYNINNNFDVHSSVNMLTPTIMNTNSLCGSHVTQRYTPENSSNGAAAASSDSFGTQVSPVSELTQDYYNVQVGSNNNNNPNSDYYQQAQQFGFFDCITSPSGLFPQMDFSSMEPNTPWIQGDTSDNFWNVENMLLFQHLNDM