AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55944

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55944.t1 MTR_2g033170 92.966 327 13 1 1 317 1 327 1.25e-178 497
MS.gene55944.t1 MTR_4g123040 63.222 329 85 9 1 314 1 308 1.28e-114 334
MS.gene55944.t1 MTR_1g086530 65.806 155 43 1 11 155 20 174 3.37e-74 229
MS.gene55944.t1 MTR_1g086510 63.314 169 45 3 18 176 15 176 7.92e-72 223
MS.gene55944.t1 MTR_1g110460 57.803 173 63 1 18 180 20 192 2.52e-68 216
MS.gene55944.t1 MTR_7g035075 76.106 113 17 1 18 120 8 120 1.51e-58 187
MS.gene55944.t1 MTR_6g006030 73.684 114 20 1 18 121 8 121 2.98e-57 184
MS.gene55944.t1 MTR_1g045610 64.762 105 27 1 25 119 22 126 1.50e-42 147
MS.gene55944.t1 MTR_1g073170 54.400 125 44 2 5 119 4 125 5.84e-41 143
MS.gene55944.t1 MTR_5g029840 52.756 127 48 2 20 136 8 132 2.25e-38 139
MS.gene55944.t1 MTR_2g096380 54.545 110 40 1 23 122 5 114 5.00e-38 135
MS.gene55944.t1 MTR_4g063100 55.556 108 38 1 25 122 8 115 1.38e-37 134
MS.gene55944.t1 MTR_2g089620 57.944 107 35 1 20 116 8 114 3.10e-37 135
MS.gene55944.t1 MTR_8g027345 56.303 119 40 2 21 127 9 127 4.77e-37 134
MS.gene55944.t1 MTR_4g091490 54.955 111 40 1 24 124 13 123 5.52e-37 135
MS.gene55944.t1 MTR_3g052450 51.351 111 44 1 20 120 36 146 6.66e-37 138
MS.gene55944.t1 MTR_2g011660 54.054 111 41 1 24 124 13 123 1.79e-36 134
MS.gene55944.t1 MTR_4g125520 58.716 109 35 1 24 122 12 120 2.25e-36 133
MS.gene55944.t1 MTR_5g007370 52.137 117 46 1 18 124 6 122 2.30e-36 132
MS.gene55944.t1 MTR_3g074520 51.667 120 48 1 20 129 8 127 2.50e-36 134
MS.gene55944.t1 MTR_4g478180 53.043 115 44 1 20 124 9 123 2.94e-36 134
MS.gene55944.t1 MTR_4g102380 52.174 115 45 1 20 124 8 122 3.39e-36 131
MS.gene55944.t1 MTR_1g017000 53.704 108 39 1 20 116 8 115 3.45e-36 131
MS.gene55944.t1 MTR_7g117730 59.633 109 34 1 21 119 9 117 4.01e-36 130
MS.gene55944.t1 MTR_3g065440 49.206 126 53 2 20 134 8 133 4.20e-36 132
MS.gene55944.t1 MTR_5g078140 51.304 115 46 1 20 124 8 122 4.55e-36 132
MS.gene55944.t1 MTR_7g076740 52.586 116 44 1 20 124 8 123 4.93e-36 132
MS.gene55944.t1 MTR_1g076150 50.413 121 50 1 20 130 8 128 7.86e-36 130
MS.gene55944.t1 MTR_3g052430 51.852 108 42 1 23 120 40 147 8.65e-36 135
MS.gene55944.t1 MTR_6g012690 49.206 126 53 2 20 134 8 133 1.96e-35 131
MS.gene55944.t1 MTR_8g042410 45.185 135 57 2 2 119 8 142 4.10e-35 134
MS.gene55944.t1 MTR_1g062940 54.206 107 39 1 23 119 5 111 5.93e-35 127
MS.gene55944.t1 MTR_4g121460 37.696 191 86 3 20 200 8 175 6.41e-35 130
MS.gene55944.t1 MTR_7g011170 49.565 115 48 1 20 124 8 122 6.64e-35 129
MS.gene55944.t1 MTR_1g085040 51.724 116 46 1 24 129 12 127 6.76e-35 130
MS.gene55944.t1 MTR_7g010210 34.252 254 138 8 20 247 8 258 7.96e-35 129
MS.gene55944.t1 MTR_1g043080 55.340 103 36 1 24 116 12 114 8.24e-35 127
MS.gene55944.t1 MTR_0008s0390 52.727 110 42 1 19 118 8 117 8.49e-35 128
MS.gene55944.t1 MTR_1g100653 54.206 107 39 1 24 120 12 118 8.78e-35 128
MS.gene55944.t1 MTR_8g098860 54.206 107 39 1 24 120 12 118 1.67e-34 128
MS.gene55944.t1 MTR_8g095390 58.416 101 32 1 26 116 14 114 1.81e-34 128
MS.gene55944.t1 MTR_8g031360 52.294 109 41 1 19 116 8 116 1.97e-34 127
MS.gene55944.t1 MTR_2g099740 53.398 103 38 1 24 116 12 114 2.11e-34 129
MS.gene55944.t1 MTR_0251s0050 51.786 112 44 1 19 120 8 119 2.30e-34 127
MS.gene55944.t1 MTR_3g083540 57.547 106 35 1 21 116 38 143 3.24e-34 127
MS.gene55944.t1 MTR_7g096930 53.153 111 42 1 20 120 8 118 3.62e-34 126
MS.gene55944.t1 MTR_4g485530 51.695 118 47 1 19 126 7 124 3.68e-34 124
MS.gene55944.t1 MTR_3g011610 51.887 106 41 1 24 119 37 142 4.48e-34 130
MS.gene55944.t1 MTR_7g010210 38.889 180 89 5 20 179 8 186 5.60e-34 125
MS.gene55944.t1 MTR_4g073420 48.052 154 60 3 26 160 14 166 5.70e-34 126
MS.gene55944.t1 MTR_4g082290 48.361 122 53 1 20 131 8 129 6.28e-34 128
MS.gene55944.t1 MTR_0008s0470 53.333 105 39 1 24 118 13 117 6.65e-34 126
MS.gene55944.t1 MTR_2g067420 54.808 104 37 1 20 113 10 113 7.22e-34 127
MS.gene55944.t1 MTR_7g115650 48.649 111 47 1 20 120 8 118 7.45e-34 123
MS.gene55944.t1 MTR_3g097450 59.406 101 31 1 26 116 14 114 7.59e-34 126
MS.gene55944.t1 MTR_1g043050 54.369 103 37 1 24 116 12 114 1.12e-33 124
MS.gene55944.t1 MTR_2g097910 51.852 108 42 1 24 121 20 127 1.20e-33 126
MS.gene55944.t1 MTR_8g017340 52.885 104 38 1 24 116 12 115 1.39e-33 129
MS.gene55944.t1 MTR_7g110830 53.153 111 42 1 24 124 12 122 1.57e-33 127
MS.gene55944.t1 MTR_2g089450 53.271 107 40 1 20 116 8 114 2.03e-33 124
MS.gene55944.t1 MTR_1g100667 49.580 119 50 1 25 133 14 132 2.08e-33 124
MS.gene55944.t1 MTR_2g089420 49.587 121 50 2 24 133 11 131 2.33e-33 127
MS.gene55944.t1 MTR_4g082230 48.361 122 53 1 20 131 8 129 2.33e-33 127
MS.gene55944.t1 MTR_4g065017 51.852 108 42 1 24 121 17 124 2.43e-33 125
MS.gene55944.t1 MTR_5g010020 58.763 97 30 1 24 110 12 108 2.78e-33 125
MS.gene55944.t1 MTR_2g064160 51.456 103 40 1 24 116 11 113 3.29e-33 124
MS.gene55944.t1 MTR_8g017440 53.398 103 38 1 24 116 12 114 3.41e-33 125
MS.gene55944.t1 MTR_5g079670 47.107 121 54 1 20 130 7 127 3.63e-33 122
MS.gene55944.t1 MTR_4g063100 67.105 76 25 0 47 122 11 86 4.25e-33 122
MS.gene55944.t1 MTR_0008s0280 52.381 105 40 1 25 119 13 117 5.08e-33 122
MS.gene55944.t1 MTR_1g021230 51.887 106 41 1 24 119 57 162 5.85e-33 126
MS.gene55944.t1 MTR_3g039990 47.321 112 49 1 20 121 9 120 2.11e-32 122
MS.gene55944.t1 MTR_1g085640 51.351 111 44 1 24 124 12 122 2.26e-32 124
MS.gene55944.t1 MTR_2g034790 52.336 107 41 1 20 116 8 114 2.35e-32 123
MS.gene55944.t1 MTR_8g017540 51.456 103 40 1 24 116 58 160 3.66e-32 123
MS.gene55944.t1 MTR_4g100720 54.128 109 40 1 24 122 13 121 3.76e-32 118
MS.gene55944.t1 MTR_8g017350 50.962 104 40 1 24 116 12 115 4.93e-32 125
MS.gene55944.t1 MTR_0140s0030 49.533 107 44 1 20 116 9 115 5.35e-32 122
MS.gene55944.t1 MTR_0489s0020 49.533 107 44 1 20 116 9 115 5.35e-32 122
MS.gene55944.t1 MTR_7g111290 52.586 116 45 1 24 129 12 127 6.03e-32 122
MS.gene55944.t1 MTR_6g009430 47.826 115 50 1 20 124 8 122 1.11e-31 121
MS.gene55944.t1 MTR_2g096380 67.105 76 25 0 47 122 20 95 1.14e-31 118
MS.gene55944.t1 MTR_8g017500 50.485 103 41 1 24 116 12 114 1.47e-31 121
MS.gene55944.t1 MTR_7g087130 48.598 107 45 1 20 116 8 114 1.58e-31 120
MS.gene55944.t1 MTR_8g017390 50.962 104 40 1 24 116 12 115 1.71e-31 123
MS.gene55944.t1 MTR_0063s0090 45.312 128 53 2 20 137 8 128 2.02e-31 117
MS.gene55944.t1 MTR_3g461490 47.967 123 53 2 23 134 11 133 2.56e-31 120
MS.gene55944.t1 MTR_4g057635 50.926 108 42 1 20 116 8 115 2.62e-31 120
MS.gene55944.t1 MTR_1g112760 52.427 103 39 1 24 116 13 115 3.08e-31 117
MS.gene55944.t1 MTR_6g012180 51.456 103 40 1 20 112 8 110 3.21e-31 119
MS.gene55944.t1 MTR_6g055910 52.941 102 38 1 25 116 15 116 3.24e-31 119
MS.gene55944.t1 MTR_3g077110 52.427 103 39 1 24 116 12 114 7.58e-31 119
MS.gene55944.t1 MTR_3g028740 50.943 106 42 1 24 119 22 127 7.72e-31 119
MS.gene55944.t1 MTR_1g017140 50.926 108 42 1 20 116 8 115 9.94e-31 119
MS.gene55944.t1 MTR_3g103570 50.926 108 42 1 20 116 8 115 1.55e-30 118
MS.gene55944.t1 MTR_5g042030 47.788 113 49 1 22 124 5 117 1.58e-30 117
MS.gene55944.t1 MTR_8g020490 50.893 112 43 2 15 116 1 110 1.71e-30 116
MS.gene55944.t1 MTR_5g014990 49.138 116 46 2 20 122 8 123 1.79e-30 117
MS.gene55944.t1 MTR_4g105130 51.456 103 40 1 24 116 12 114 2.24e-30 118
MS.gene55944.t1 MTR_8g006470 43.220 118 56 2 15 121 1 118 3.77e-30 115
MS.gene55944.t1 MTR_1g083630 47.541 122 49 2 8 119 1 117 4.22e-30 120
MS.gene55944.t1 MTR_2g095520 50.000 104 41 1 20 112 8 111 1.24e-29 115
MS.gene55944.t1 MTR_6g090405 49.074 108 44 1 20 116 8 115 1.11e-28 111
MS.gene55944.t1 MTR_4g097570 51.961 102 38 1 20 110 8 109 1.19e-28 112
MS.gene55944.t1 MTR_4g097570 51.456 103 38 1 20 110 8 110 1.59e-28 112
MS.gene55944.t1 MTR_2g088170 44.355 124 55 2 10 119 11 134 1.83e-28 114
MS.gene55944.t1 MTR_7g102110 46.296 108 47 1 20 116 8 115 2.10e-28 110
MS.gene55944.t1 MTR_4g128670 50.962 104 40 1 20 112 8 111 5.04e-28 111
MS.gene55944.t1 MTR_0197s0010 34.737 190 104 4 29 205 6 188 5.88e-28 108
MS.gene55944.t1 MTR_7g109320 49.541 109 45 1 20 118 8 116 1.01e-26 108
MS.gene55944.t1 MTR_6g055910 60.563 71 28 0 46 116 17 87 5.03e-26 104
MS.gene55944.t1 MTR_5g079120 42.537 134 67 2 6 129 43 176 9.12e-26 104
MS.gene55944.t1 MTR_7g111290 59.036 83 34 0 47 129 3 85 1.88e-25 104
MS.gene55944.t1 MTR_4g029540 41.121 107 52 2 24 119 10 116 2.40e-25 103
MS.gene55944.t1 MTR_5g062790 40.517 116 58 2 16 120 1 116 2.87e-25 103
MS.gene55944.t1 MTR_5g088080 43.519 108 50 2 23 119 11 118 4.17e-25 102
MS.gene55944.t1 MTR_5g088150 43.519 108 50 2 23 119 11 118 4.17e-25 102
MS.gene55944.t1 MTR_5g488210 43.519 108 50 2 23 119 11 118 4.17e-25 102
MS.gene55944.t1 MTR_5g088640 43.519 108 50 2 23 119 11 118 4.57e-25 102
MS.gene55944.t1 MTR_5g488170 43.519 108 50 2 23 119 11 118 6.79e-25 100
MS.gene55944.t1 MTR_0247s0040 50.000 102 41 1 24 115 7 108 1.07e-24 98.6
MS.gene55944.t1 MTR_5g088610 41.739 115 56 2 16 119 1 115 1.10e-24 102
MS.gene55944.t1 MTR_5g078910 47.573 103 44 1 24 116 7 109 2.80e-24 100
MS.gene55944.t1 MTR_7g017260 43.478 115 53 1 16 118 17 131 3.67e-24 99.8
MS.gene55944.t1 MTR_0001s0360 48.544 103 43 1 24 116 7 109 4.58e-24 99.0
MS.gene55944.t1 MTR_8g060940 50.495 101 40 1 24 114 7 107 4.88e-24 98.6
MS.gene55944.t1 MTR_5g079290 47.573 103 44 1 24 116 17 119 5.07e-24 99.0
MS.gene55944.t1 MTR_4g128190 44.762 105 54 2 18 121 5 106 5.51e-24 98.2
MS.gene55944.t1 MTR_5g078800 47.619 105 45 1 24 118 7 111 1.30e-23 97.8
MS.gene55944.t1 MTR_5g016510 32.584 178 97 3 22 187 1 167 1.88e-23 98.6
MS.gene55944.t1 MTR_5g079220 47.573 103 44 1 24 116 21 123 2.24e-23 97.4
MS.gene55944.t1 MTR_5g078950 46.729 107 47 1 19 115 2 108 2.27e-23 97.4
MS.gene55944.t1 MTR_5g078860 50.485 103 41 2 24 116 7 109 4.19e-23 97.4
MS.gene55944.t1 MTR_3g045430 40.678 118 59 2 24 130 13 130 7.18e-23 96.7
MS.gene55944.t1 MTR_0193s0090 46.602 103 45 1 24 116 7 109 7.52e-23 94.4
MS.gene55944.t1 MTR_7g061330 41.748 103 51 1 23 116 110 212 2.69e-22 97.4
MS.gene55944.t1 MTR_7g461410 41.748 103 51 1 23 116 110 212 2.69e-22 97.4
MS.gene55944.t1 MTR_7g061330 41.748 103 51 1 23 116 74 176 6.96e-22 96.3
MS.gene55944.t1 MTR_5g070020 29.834 181 116 2 10 179 104 284 1.27e-21 94.0
MS.gene55944.t1 MTR_3g110028 33.758 157 85 3 23 168 82 230 1.66e-21 95.5
MS.gene55944.t1 MTR_3g101290 39.815 108 56 1 20 118 31 138 3.18e-21 90.5
MS.gene55944.t1 MTR_5g049190 40.000 105 53 2 26 120 19 123 4.86e-21 90.5
MS.gene55944.t1 MTR_6g027340 38.182 110 59 2 29 129 19 128 6.21e-21 89.4
MS.gene55944.t1 MTR_4g019370 42.157 102 50 2 26 118 38 139 9.60e-21 91.7
MS.gene55944.t1 MTR_6g015455 40.179 112 58 1 22 124 1 112 1.47e-20 92.8
MS.gene55944.t1 MTR_5g078930 43.089 123 56 2 25 133 10 132 1.96e-20 88.2
MS.gene55944.t1 MTR_3g077650 38.182 110 58 3 21 120 176 285 3.75e-20 90.9
MS.gene55944.t1 MTR_4g088015 36.364 121 68 2 26 137 221 341 4.14e-20 90.5
MS.gene55944.t1 MTR_3g463400 41.837 98 48 2 22 110 129 226 4.29e-20 90.5
MS.gene55944.t1 MTR_1g026870 40.000 105 50 2 23 116 82 184 7.25e-20 90.9
MS.gene55944.t1 MTR_4g105660 33.333 132 79 2 1 123 155 286 7.72e-20 89.7
MS.gene55944.t1 MTR_6g027360 36.522 115 64 2 24 129 76 190 7.98e-20 88.2
MS.gene55944.t1 MTR_7g037260 36.719 128 68 2 21 137 140 265 8.08e-20 89.0
MS.gene55944.t1 MTR_4g094982 38.095 105 56 1 22 117 1 105 3.38e-19 85.9
MS.gene55944.t1 MTR_7g450950 41.905 105 46 3 26 117 157 259 9.11e-19 85.9
MS.gene55944.t1 MTR_1g085880 42.609 115 54 3 18 120 5 119 9.32e-19 83.2
MS.gene55944.t1 MTR_7g086960 30.769 182 98 5 26 196 89 253 1.49e-18 85.5
MS.gene55944.t1 MTR_5g007300 48.052 77 30 1 24 90 64 140 2.52e-18 80.5
MS.gene55944.t1 MTR_7g451170 42.553 94 45 2 26 110 191 284 2.77e-18 85.1
MS.gene55944.t1 MTR_1g057980 41.584 101 46 3 21 110 75 173 3.99e-18 83.6
MS.gene55944.t1 MTR_1g085770 42.609 115 54 3 18 120 5 119 4.56e-18 83.6
MS.gene55944.t1 MTR_5g082910 41.441 111 52 2 9 110 6 112 5.74e-18 82.8
MS.gene55944.t1 MTR_6g074860 43.617 94 44 2 26 110 4 97 5.74e-18 82.0
MS.gene55944.t1 MTR_7g035350 43.956 91 42 2 29 110 228 318 6.32e-18 84.3
MS.gene55944.t1 MTR_5g041570 39.423 104 54 2 26 120 134 237 1.31e-17 83.2
MS.gene55944.t1 MTR_4g082040 38.462 104 55 2 26 120 105 208 3.42e-17 82.0
MS.gene55944.t1 MTR_4g063100 64.706 51 18 0 72 122 1 51 3.63e-17 78.6
MS.gene55944.t1 MTR_7g061550 34.513 113 62 1 26 126 7 119 9.03e-17 80.5
MS.gene55944.t1 MTR_6g027370 34.513 113 65 1 26 129 99 211 9.42e-17 80.1
MS.gene55944.t1 MTR_2g096380 64.706 51 18 0 72 122 1 51 1.39e-16 76.6
MS.gene55944.t1 MTR_5g010650 40.206 97 49 1 23 110 107 203 1.69e-16 80.1
MS.gene55944.t1 MTR_3g089045 34.127 126 74 2 18 134 8 133 9.50e-16 76.6
MS.gene55944.t1 MTR_7g037130 30.519 154 92 3 12 154 133 282 3.55e-15 75.5
MS.gene55944.t1 MTR_5g038910 38.000 100 53 1 29 119 29 128 7.18e-15 75.5
MS.gene55944.t1 MTR_5g038910 38.000 100 53 1 29 119 29 128 1.30e-14 74.3
MS.gene55944.t1 MTR_8g468380 34.532 139 68 4 29 149 25 158 1.43e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55944.t1 AT5G49620 52.000 325 80 12 19 314 21 298 5.30e-80 246
MS.gene55944.t1 AT5G49620 49.853 339 80 13 19 314 21 312 3.01e-76 236
MS.gene55944.t1 AT3G06490 48.071 337 108 12 1 306 1 301 1.52e-75 235
MS.gene55944.t1 AT1G48000 69.481 154 33 2 22 165 30 179 4.39e-75 231
MS.gene55944.t1 AT2G47190 70.423 142 32 1 19 150 15 156 2.46e-70 219
MS.gene55944.t1 AT1G68320 67.133 143 37 1 23 155 18 160 4.15e-66 209
MS.gene55944.t1 AT1G25340 58.940 151 52 1 25 165 19 169 1.72e-60 195
MS.gene55944.t1 AT1G25340 59.589 146 54 1 25 165 19 164 1.15e-59 192
MS.gene55944.t1 AT1G25340 59.589 146 54 1 25 165 19 164 3.34e-59 192
MS.gene55944.t1 AT3G27810 73.636 110 19 1 21 120 17 126 1.53e-56 183
MS.gene55944.t1 AT5G40350 74.286 105 17 1 23 117 16 120 6.44e-54 176
MS.gene55944.t1 AT3G01530 68.142 113 26 1 17 119 18 130 2.38e-53 174
MS.gene55944.t1 AT3G27810 85.135 74 11 0 47 120 4 77 1.34e-43 148
MS.gene55944.t1 AT4G13480 63.810 105 28 1 25 119 7 111 1.69e-41 145
MS.gene55944.t1 AT3G24310 61.468 109 32 1 21 119 15 123 3.21e-41 144
MS.gene55944.t1 AT5G40350 84.507 71 11 0 47 117 5 75 7.21e-41 140
MS.gene55944.t1 AT3G30210 60.952 105 31 1 25 119 28 132 1.45e-40 143
MS.gene55944.t1 AT5G59780 56.364 110 38 1 23 122 7 116 2.42e-39 139
MS.gene55944.t1 AT3G46130 56.250 112 39 1 25 126 10 121 3.36e-39 139
MS.gene55944.t1 AT3G02940 56.522 115 40 1 20 124 8 122 8.15e-39 139
MS.gene55944.t1 AT3G02940 56.522 115 40 1 20 124 8 122 1.54e-38 139
MS.gene55944.t1 AT3G02940 56.522 115 40 1 20 124 8 122 1.54e-38 139
MS.gene55944.t1 AT5G65230 52.459 122 48 1 18 129 6 127 2.56e-37 135
MS.gene55944.t1 AT5G16770 50.735 136 55 3 20 143 8 143 2.89e-37 135
MS.gene55944.t1 AT5G16770 50.735 136 55 3 20 143 8 143 2.89e-37 135
MS.gene55944.t1 AT5G14340 54.783 115 42 1 20 124 20 134 2.95e-37 134
MS.gene55944.t1 AT3G23250 38.728 173 92 2 20 182 8 176 4.48e-37 134
MS.gene55944.t1 AT5G16770 50.735 136 55 3 20 143 8 143 4.80e-37 135
MS.gene55944.t1 AT5G16770 50.735 136 55 3 20 143 8 143 4.80e-37 135
MS.gene55944.t1 AT5G10280 53.043 115 44 1 20 124 8 122 1.81e-36 134
MS.gene55944.t1 AT1G16490 56.075 107 37 1 20 116 10 116 1.88e-36 132
MS.gene55944.t1 AT1G34670 48.507 134 58 2 20 143 8 140 1.91e-36 134
MS.gene55944.t1 AT4G22680 50.000 120 50 1 20 129 8 127 3.11e-36 131
MS.gene55944.t1 AT5G15310 52.174 115 45 1 20 124 8 122 4.35e-36 132
MS.gene55944.t1 AT4G12350 50.000 120 50 1 20 129 8 127 5.11e-36 131
MS.gene55944.t1 AT5G15310 52.174 115 45 1 20 124 8 122 5.32e-36 130
MS.gene55944.t1 AT5G15310 52.174 115 45 1 20 124 8 122 5.92e-36 132
MS.gene55944.t1 AT4G05100 54.054 111 41 1 24 124 13 123 7.03e-36 132
MS.gene55944.t1 AT1G66230 51.304 115 46 1 20 124 8 122 7.16e-36 131
MS.gene55944.t1 AT4G21440 52.252 111 43 1 24 124 12 122 7.63e-36 132
MS.gene55944.t1 AT5G54230 52.252 111 43 1 24 124 12 122 9.30e-36 131
MS.gene55944.t1 AT3G01140 48.780 123 53 1 20 132 8 130 1.18e-35 132
MS.gene55944.t1 AT3G13540 51.220 123 50 1 21 133 20 142 1.67e-35 129
MS.gene55944.t1 AT5G62320 47.368 133 53 1 20 135 9 141 1.98e-35 129
MS.gene55944.t1 AT1G79180 53.153 111 42 1 20 120 10 120 2.16e-35 130
MS.gene55944.t1 AT1G09540 52.586 116 45 1 24 129 12 127 2.26e-35 132
MS.gene55944.t1 AT4G28110 54.206 107 39 1 20 116 8 114 2.61e-35 129
MS.gene55944.t1 AT4G34990 61.386 101 29 1 26 116 14 114 2.61e-35 129
MS.gene55944.t1 AT5G16600 50.435 115 47 1 20 124 8 122 2.73e-35 130
MS.gene55944.t1 AT3G01140 48.780 123 53 1 20 132 51 173 3.12e-35 132
MS.gene55944.t1 AT5G07690 55.340 103 36 1 24 116 12 114 3.25e-35 130
MS.gene55944.t1 AT1G06180 55.140 107 38 1 20 116 8 114 4.12e-35 128
MS.gene55944.t1 AT1G22640 52.991 117 45 1 24 130 12 128 4.20e-35 128
MS.gene55944.t1 AT3G53200 56.604 106 36 1 21 116 6 111 5.03e-35 127
MS.gene55944.t1 AT3G47600 49.573 117 47 2 20 124 8 124 5.31e-35 130
MS.gene55944.t1 AT3G11440 52.427 103 39 1 24 116 41 143 6.00e-35 132
MS.gene55944.t1 AT5G07700 54.369 103 37 1 24 116 12 114 9.00e-35 129
MS.gene55944.t1 AT5G07700 54.369 103 37 1 24 116 12 114 9.00e-35 129
MS.gene55944.t1 AT1G57560 57.282 103 34 1 24 116 12 114 9.44e-35 129
MS.gene55944.t1 AT4G26930 53.271 107 40 1 24 120 19 125 9.47e-35 130
MS.gene55944.t1 AT1G35515 57.282 103 34 1 24 116 12 114 1.04e-34 126
MS.gene55944.t1 AT1G57560 57.282 103 34 1 24 116 12 114 1.09e-34 127
MS.gene55944.t1 AT1G18570 55.660 106 37 1 21 116 10 115 1.45e-34 129
MS.gene55944.t1 AT1G56160 54.206 107 39 1 20 116 10 116 1.49e-34 128
MS.gene55944.t1 AT5G61420 54.369 103 37 1 24 116 12 114 1.65e-34 129
MS.gene55944.t1 AT3G11440 50.943 106 42 1 24 119 41 146 2.29e-34 132
MS.gene55944.t1 AT3G11440 50.943 106 42 1 24 119 41 146 2.29e-34 132
MS.gene55944.t1 AT3G11440 50.943 106 42 1 24 119 41 146 2.29e-34 132
MS.gene55944.t1 AT2G31180 55.140 107 38 1 20 116 8 114 2.58e-34 126
MS.gene55944.t1 AT3G13890 53.398 103 38 1 24 116 12 114 2.65e-34 129
MS.gene55944.t1 AT4G09460 57.426 101 33 1 26 116 14 114 3.09e-34 125
MS.gene55944.t1 AT5G06100 51.887 106 41 1 24 119 32 137 3.85e-34 130
MS.gene55944.t1 AT5G26660 52.252 111 43 1 24 124 12 122 3.97e-34 128
MS.gene55944.t1 AT2G47460 56.075 107 37 1 20 116 8 114 4.17e-34 128
MS.gene55944.t1 AT3G46130 60.674 89 35 0 38 126 1 89 5.69e-34 124
MS.gene55944.t1 AT4G38620 58.416 101 32 1 26 116 14 114 6.88e-34 125
MS.gene55944.t1 AT5G06100 51.887 106 41 1 24 119 32 137 1.17e-33 129
MS.gene55944.t1 AT5G06100 51.887 106 41 1 24 119 32 137 1.17e-33 129
MS.gene55944.t1 AT5G06100 51.887 106 41 1 24 119 32 137 1.17e-33 129
MS.gene55944.t1 AT5G06100 51.887 106 41 1 24 119 32 137 1.17e-33 129
MS.gene55944.t1 AT2G16720 57.426 101 33 1 26 116 14 114 1.28e-33 124
MS.gene55944.t1 AT1G63910 53.271 107 40 1 24 120 12 118 1.50e-33 127
MS.gene55944.t1 AT5G40330 50.000 114 47 1 13 116 1 114 2.31e-33 122
MS.gene55944.t1 AT5G14750 52.885 104 39 1 23 116 15 118 3.57e-33 121
MS.gene55944.t1 AT5G60890 51.304 115 46 1 21 125 9 123 4.26e-33 124
MS.gene55944.t1 AT3G13890 49.107 112 38 1 24 116 12 123 5.11e-33 125
MS.gene55944.t1 AT5G59780 68.421 76 24 0 47 122 20 95 5.14e-33 121
MS.gene55944.t1 AT3G61250 48.696 115 49 1 20 124 8 122 5.60e-33 124
MS.gene55944.t1 AT5G62470 48.214 112 48 1 20 121 8 119 6.62e-33 125
MS.gene55944.t1 AT3G46130 66.250 80 27 0 47 126 20 99 6.77e-33 122
MS.gene55944.t1 AT5G49330 54.206 107 39 1 20 116 8 114 1.34e-32 124
MS.gene55944.t1 AT1G08810 44.444 126 60 1 20 135 8 133 1.48e-32 122
MS.gene55944.t1 AT1G74650 47.788 113 49 1 20 122 8 120 1.98e-32 123
MS.gene55944.t1 AT4G17785 50.000 116 48 1 19 124 8 123 2.28e-32 123
MS.gene55944.t1 AT3G27920 52.885 104 39 1 23 116 13 116 2.32e-32 120
MS.gene55944.t1 AT4G17785 50.000 116 48 1 19 124 8 123 2.37e-32 123
MS.gene55944.t1 AT5G55020 48.673 113 48 1 18 120 20 132 2.52e-32 125
MS.gene55944.t1 AT3G12720 49.515 103 42 1 24 116 22 124 2.73e-32 122
MS.gene55944.t1 AT2G32460 49.057 106 44 1 24 119 6 111 2.73e-32 125
MS.gene55944.t1 AT2G32460 49.057 106 44 1 24 119 18 123 2.75e-32 125
MS.gene55944.t1 AT3G62610 53.271 107 40 1 20 116 8 114 3.25e-32 122
MS.gene55944.t1 AT4G37780 50.926 108 42 1 20 116 8 115 4.79e-32 121
MS.gene55944.t1 AT5G35550 56.731 104 35 1 23 116 13 116 5.55e-32 120
MS.gene55944.t1 AT5G52600 53.398 103 38 1 24 116 12 114 8.47e-32 118
MS.gene55944.t1 AT3G08500 53.774 106 39 1 24 119 30 135 1.29e-31 121
MS.gene55944.t1 AT1G74080 52.427 103 39 1 24 116 12 114 2.31e-31 120
MS.gene55944.t1 AT5G62470 47.748 111 49 1 20 121 8 118 2.47e-31 120
MS.gene55944.t1 AT1G79180 41.667 144 41 1 20 120 10 153 3.02e-31 120
MS.gene55944.t1 AT3G28910 50.467 107 43 1 20 116 8 114 3.27e-31 119
MS.gene55944.t1 AT4G01680 53.398 103 38 1 24 116 12 114 4.21e-31 117
MS.gene55944.t1 AT3G49690 50.926 108 42 1 20 116 8 115 4.63e-31 119
MS.gene55944.t1 AT5G12870 48.148 108 46 1 24 121 18 125 4.63e-31 118
MS.gene55944.t1 AT4G01680 51.887 106 41 1 24 119 12 117 5.99e-31 119
MS.gene55944.t1 AT5G57620 50.000 108 43 1 20 116 8 115 9.78e-31 118
MS.gene55944.t1 AT2G26960 47.788 113 45 2 18 116 10 122 1.08e-30 120
MS.gene55944.t1 AT5G23000 49.074 108 44 1 20 116 8 115 1.08e-30 118
MS.gene55944.t1 AT5G56110 47.967 123 53 2 23 134 11 133 1.26e-30 118
MS.gene55944.t1 AT4G25560 50.980 102 40 1 25 116 11 112 2.98e-30 116
MS.gene55944.t1 AT5G65790 45.600 125 53 2 20 133 8 128 4.35e-30 117
MS.gene55944.t1 AT5G52260 52.941 102 38 1 25 116 13 114 9.76e-30 114
MS.gene55944.t1 AT2G36890 50.000 108 43 1 20 116 8 115 1.13e-29 115
MS.gene55944.t1 AT2G36890 50.000 108 43 1 20 116 49 156 2.01e-29 115
MS.gene55944.t1 AT3G12820 50.467 107 43 1 20 116 10 116 2.23e-29 112
MS.gene55944.t1 AT3G53200 67.143 70 23 0 47 116 9 78 2.52e-29 111
MS.gene55944.t1 AT4G01680 46.610 118 41 1 24 119 12 129 3.46e-29 114
MS.gene55944.t1 AT1G74430 46.847 111 49 1 24 124 12 122 1.36e-28 111
MS.gene55944.t1 AT3G48920 47.059 102 44 1 25 116 19 120 2.30e-28 110
MS.gene55944.t1 AT3G28470 47.573 103 44 1 20 112 8 110 2.51e-28 112
MS.gene55944.t1 AT3G60460 43.636 110 51 2 23 121 10 119 3.92e-28 110
MS.gene55944.t1 AT5G26660 58.974 78 32 0 47 124 14 91 1.91e-27 109
MS.gene55944.t1 AT1G66370 48.182 110 47 1 24 123 8 117 3.76e-27 107
MS.gene55944.t1 AT5G35550 57.303 89 36 1 30 116 31 119 7.21e-27 106
MS.gene55944.t1 AT1G18710 46.602 103 45 1 24 116 12 114 5.00e-26 104
MS.gene55944.t1 AT3G47600 57.500 80 32 1 47 124 39 118 6.26e-26 105
MS.gene55944.t1 AT5G14750 62.687 67 25 0 50 116 18 84 1.08e-24 98.6
MS.gene55944.t1 AT3G12820 64.179 67 24 0 50 116 2 68 1.23e-24 99.0
MS.gene55944.t1 AT5G11050 38.060 134 67 3 26 144 105 237 4.58e-23 99.0
MS.gene55944.t1 AT1G66380 50.485 103 41 1 24 116 8 110 1.79e-22 91.7
MS.gene55944.t1 AT1G56650 38.372 172 94 3 24 185 8 177 3.13e-22 94.0
MS.gene55944.t1 AT5G58850 38.017 121 60 2 23 128 102 222 4.93e-22 96.3
MS.gene55944.t1 AT2G26950 38.739 111 54 2 17 113 5 115 1.11e-21 94.7
MS.gene55944.t1 AT1G66390 50.485 103 41 1 24 116 8 110 2.11e-21 91.7
MS.gene55944.t1 AT3G09370 38.679 106 56 1 23 119 127 232 4.12e-21 94.0
MS.gene55944.t1 AT3G09370 38.679 106 56 1 23 119 132 237 4.31e-21 94.0
MS.gene55944.t1 AT5G11510 39.806 103 53 1 23 116 78 180 6.03e-21 94.0
MS.gene55944.t1 AT5G11510 39.806 103 53 1 23 116 78 180 6.03e-21 94.0
MS.gene55944.t1 AT5G11510 39.806 103 53 1 23 116 78 180 6.03e-21 94.0
MS.gene55944.t1 AT3G09370 38.679 106 56 1 23 119 140 245 6.44e-21 93.6
MS.gene55944.t1 AT3G27785 40.187 107 54 2 26 122 189 295 6.58e-21 92.8
MS.gene55944.t1 AT5G11510 39.806 103 53 1 23 116 78 180 7.57e-21 93.6
MS.gene55944.t1 AT5G11510 39.806 103 53 1 23 116 78 180 7.68e-21 93.6
MS.gene55944.t1 AT4G18770 38.739 111 55 2 24 123 215 323 8.26e-21 92.8
MS.gene55944.t1 AT2G23290 41.121 107 54 1 21 118 8 114 1.77e-20 90.1
MS.gene55944.t1 AT5G02320 38.835 103 54 1 23 116 124 226 3.44e-20 91.3
MS.gene55944.t1 AT5G02320 38.835 103 54 1 23 116 124 226 3.44e-20 91.3
MS.gene55944.t1 AT5G02320 38.835 103 54 1 23 116 64 166 7.32e-20 90.1
MS.gene55944.t1 AT1G22640 56.338 71 31 0 60 130 1 71 7.77e-20 86.3
MS.gene55944.t1 AT3G23250 34.959 123 76 1 60 182 1 119 2.27e-19 85.5
MS.gene55944.t1 AT4G32730 36.893 103 56 1 23 116 84 186 2.28e-19 89.4
MS.gene55944.t1 AT4G32730 36.893 103 56 1 23 116 84 186 2.28e-19 89.4
MS.gene55944.t1 AT4G32730 36.893 103 56 1 23 116 84 186 2.28e-19 89.4
MS.gene55944.t1 AT4G32730 36.893 103 56 1 23 116 84 186 2.28e-19 89.4
MS.gene55944.t1 AT4G32730 36.893 103 56 1 23 116 84 186 2.64e-19 89.0
MS.gene55944.t1 AT4G37260 38.393 112 55 2 26 128 13 119 6.70e-19 85.9
MS.gene55944.t1 AT5G67300 32.903 155 87 3 23 168 3 149 1.46e-18 84.7
MS.gene55944.t1 AT2G39880 37.778 135 72 4 26 150 50 182 1.64e-18 85.5
MS.gene55944.t1 AT3G55730 39.048 105 55 2 26 121 56 160 2.38e-18 85.5
MS.gene55944.t1 AT1G69560 39.423 104 54 2 26 120 123 226 2.81e-18 84.7
MS.gene55944.t1 AT1G69560 39.423 104 54 2 26 120 107 210 3.09e-18 84.3
MS.gene55944.t1 AT5G59780 66.667 51 17 0 72 122 1 51 3.36e-18 80.9
MS.gene55944.t1 AT3G46130 63.636 55 20 0 72 126 1 55 4.36e-18 81.3
MS.gene55944.t1 AT5G17800 39.091 110 52 2 26 120 93 202 5.35e-18 83.6
MS.gene55944.t1 AT1G26780 38.679 106 56 2 24 120 96 201 6.14e-18 83.6
MS.gene55944.t1 AT1G66380 51.220 82 35 1 35 116 1 77 6.22e-18 78.2
MS.gene55944.t1 AT1G26780 41.837 98 48 2 24 112 96 193 8.74e-18 82.4
MS.gene55944.t1 AT3G29020 37.500 104 56 2 26 120 65 168 1.70e-17 80.5
MS.gene55944.t1 AT3G29020 37.500 104 56 2 26 120 67 170 2.23e-17 81.6
MS.gene55944.t1 AT5G14750 57.895 57 24 0 60 116 1 57 2.94e-17 77.8
MS.gene55944.t1 AT5G14750 57.895 57 24 0 60 116 1 57 2.94e-17 77.8
MS.gene55944.t1 AT3G09230 40.566 106 50 2 23 117 52 155 3.06e-17 82.0
MS.gene55944.t1 AT1G71030 42.353 85 49 0 53 137 5 89 3.34e-17 78.6
MS.gene55944.t1 AT1G17950 39.423 104 54 1 26 120 5 108 4.03e-17 79.7
MS.gene55944.t1 AT1G71030 42.353 85 49 0 53 137 19 103 4.17e-17 78.6
MS.gene55944.t1 AT1G73410 42.308 104 51 2 26 120 6 109 5.61e-17 79.3
MS.gene55944.t1 AT5G40360 34.862 109 61 2 24 122 156 264 7.16e-17 80.5
MS.gene55944.t1 AT2G25230 40.187 107 48 3 23 115 23 127 7.19e-17 79.0
MS.gene55944.t1 AT1G73410 42.308 104 51 2 26 120 6 109 1.40e-16 77.4
MS.gene55944.t1 AT3G50060 36.190 105 58 1 23 118 3 107 1.57e-16 79.0
MS.gene55944.t1 AT5G39700 39.252 107 56 2 15 112 45 151 2.92e-16 76.3
MS.gene55944.t1 AT4G33450 43.902 82 44 1 39 120 43 122 3.56e-16 77.0
MS.gene55944.t1 AT4G00540 35.455 110 59 1 24 121 101 210 6.98e-16 78.2
MS.gene55944.t1 AT1G18960 33.333 108 61 2 26 124 10 115 1.18e-15 76.6
MS.gene55944.t1 AT4G00540 35.455 110 59 1 24 121 99 208 1.33e-15 77.4
MS.gene55944.t1 AT2G37630 34.862 109 59 1 26 122 4 112 2.42e-15 76.3
MS.gene55944.t1 AT5G40430 37.736 106 51 3 23 115 51 154 4.72e-15 73.9
MS.gene55944.t1 AT1G14350 37.000 100 54 1 29 119 28 127 9.84e-15 74.7
MS.gene55944.t1 AT1G14350 37.000 100 54 1 29 119 28 127 9.84e-15 74.7
MS.gene55944.t1 AT2G02820 31.056 161 88 4 15 156 17 173 7.51e-14 72.4
MS.gene55944.t1 AT2G02820 31.056 161 88 4 15 156 17 173 7.94e-14 72.0
MS.gene55944.t1 AT2G02820 34.091 132 68 3 15 127 17 148 1.98e-13 70.5
MS.gene55944.t1 AT4G25560 60.000 45 18 0 72 116 2 46 8.94e-13 67.0
MS.gene55944.t1 AT1G66380 46.032 63 24 1 24 76 8 70 1.89e-11 60.5
MS.gene55944.t1 AT1G14350 44.444 63 35 0 58 120 23 85 4.77e-11 63.5
MS.gene55944.t1 AT1G14350 44.444 63 35 0 58 120 23 85 4.77e-11 63.5

Find 85 sgRNAs with CRISPR-Local

Find 124 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGTAAGTATTGTGCAATTT+TGG 0.168994 2.3:+57289177 None:intergenic
TGTTGGTAATAATCAGAATT+AGG 0.176139 2.3:+57288686 None:intergenic
TACCAACAAGCTCAGCAATT+TGG 0.199585 2.3:-57288671 MS.gene55944:CDS
GGGACACATCTGACAATTTC+TGG 0.217259 2.3:-57288562 MS.gene55944:CDS
ATCTCGTTGTCTGTTCTTCC+CGG 0.266163 2.3:+57289157 None:intergenic
ACAACGAGATCAAGAATTAT+TGG 0.314777 2.3:-57289144 MS.gene55944:CDS
CCTTGAATCCAAGGAGTGTT+TGG 0.318256 2.3:+57288584 None:intergenic
ACCAACAAGCTCAGCAATTT+GGG 0.318446 2.3:-57288670 MS.gene55944:CDS
GCTGCATCATCGGATTCATT+TGG 0.322005 2.3:-57288785 MS.gene55944:CDS
GGTGGCTCGGGTGGCGGAGG+TGG 0.323196 2.3:+57289000 None:intergenic
TGGCGCCGCGGCTGCATCAT+CGG 0.345089 2.3:-57288795 MS.gene55944:CDS
GTTGGTAATAATCAGAATTA+GGG 0.353037 2.3:+57288687 None:intergenic
ATCTGGATTGTTCCCTCAAA+TGG 0.353663 2.3:-57288624 MS.gene55944:CDS
CCTTTGGATGCCAAGGTTAG+TGG 0.355811 2.3:-57289044 MS.gene55944:CDS
TACGTCACATTTGAGTTGTT+TGG 0.355884 2.3:+57289099 None:intergenic
TTCATAGTCGTTGGGGAAAC+CGG 0.357053 2.3:-57289478 MS.gene55944:intron
CGAGCCACCGCCACTAATAA+TGG 0.357709 2.3:-57288986 MS.gene55944:CDS
CAAAATTGCACAATACTTAC+CGG 0.367480 2.3:-57289176 MS.gene55944:CDS
ATGTTACCACGACGAACATC+TGG 0.367650 2.3:+57289533 None:intergenic
GATTGCATCACTAGCCCATC+TGG 0.373109 2.3:-57288641 MS.gene55944:CDS
CTGCATCATCGGATTCATTT+GGG 0.373323 2.3:-57288784 MS.gene55944:CDS
GGCGGTGGCTCGGGTGGCGG+AGG 0.377228 2.3:+57288997 None:intergenic
AAGATGCCATGCGCTACCTT+TGG 0.397038 2.3:-57289060 MS.gene55944:CDS
CATTATTAGTGGCGGTGGCT+CGG 0.400688 2.3:+57288987 None:intergenic
ACCCAAATTGCTGAGCTTGT+TGG 0.406996 2.3:+57288669 None:intergenic
TGTTGGTGTTCATAATTGTT+GGG 0.412586 2.3:+57288870 None:intergenic
CCAAGGAGTGTTTGGTTCCA+TGG 0.416961 2.3:+57288592 None:intergenic
CCAAACACTCCTTGGATTCA+AGG 0.418970 2.3:-57288584 MS.gene55944:CDS
TTCTTGAACTTCATAGTCGT+TGG 0.421499 2.3:-57289487 MS.gene55944:CDS
TCTTGAACTTCATAGTCGTT+GGG 0.421944 2.3:-57289486 MS.gene55944:CDS
ATCAATTACATTGCAAATCA+TGG 0.428806 2.3:-57290240 MS.gene55944:CDS
TCGGGTGGCGGAGGTGGATG+CGG 0.434916 2.3:+57289006 None:intergenic
AGTGGCGGTGGCTCGGGTGG+CGG 0.441443 2.3:+57288994 None:intergenic
ATTATTAGTGGCGGTGGCTC+GGG 0.451809 2.3:+57288988 None:intergenic
ATTTCAATATTTCATGGAAG+TGG 0.456263 2.3:-57290364 None:intergenic
TATTGTTGTTACTACCAACT+TGG 0.458463 2.3:+57288714 None:intergenic
CCATGGAACCAAACACTCCT+TGG 0.463876 2.3:-57288592 MS.gene55944:CDS
TCTTGAGTCAATTCCGAGAC+AGG 0.470088 2.3:+57288749 None:intergenic
ATGAACACCAACAATTTATG+TGG 0.470396 2.3:-57288860 MS.gene55944:CDS
GTTATAGGACTCAAACGAAC+GGG 0.473603 2.3:-57289593 MS.gene55944:intron
CGGAGGTGGATGCGGCAGCT+TGG 0.476078 2.3:+57289014 None:intergenic
TATGTTATATGTCGTATTGT+TGG 0.476207 2.3:+57288934 None:intergenic
TCAAATGGATTTCAGTTCCA+TGG 0.479194 2.3:-57288609 MS.gene55944:CDS
ACTTGGTGAACCATTATTAG+TGG 0.482800 2.3:+57288976 None:intergenic
GACACAAGTTTCGCCTGTCT+CGG 0.486609 2.3:-57288762 MS.gene55944:CDS
GCGCCATTGCTACTATTCTC+TGG 0.490228 2.3:+57288812 None:intergenic
TTGTTGGTGTTCATAATTGT+TGG 0.495169 2.3:+57288869 None:intergenic
ATGGAACTGAAATCCATTTG+AGG 0.515326 2.3:+57288611 None:intergenic
GTTATATGTCGTATTGTTGG+TGG 0.520096 2.3:+57288937 None:intergenic
TGAACCATTATTAGTGGCGG+TGG 0.522243 2.3:+57288982 None:intergenic
GATCCAACTCATCATCACTT+TGG 0.528166 2.3:+57290304 None:intergenic
CTCATCATCACTTTGGAGCA+TGG 0.530302 2.3:+57290311 None:intergenic
TGGAACTGAAATCCATTTGA+GGG 0.531486 2.3:+57288612 None:intergenic
TGCGCTACCTTTGGATGCCA+AGG 0.532069 2.3:-57289051 MS.gene55944:CDS
CAAACACTCCTTGGATTCAA+GGG 0.533991 2.3:-57288583 MS.gene55944:CDS
AGATCTTCATCGACGGTCCA+TGG 0.536902 2.3:+57290270 None:intergenic
ATTAGTGGCGGTGGCTCGGG+TGG 0.538647 2.3:+57288991 None:intergenic
ATGTGAACCACATAAATTGT+TGG 0.544638 2.3:+57288853 None:intergenic
GATTATTACAATGTCCAAGT+TGG 0.548318 2.3:-57288728 MS.gene55944:CDS
CTTGAACTTCATAGTCGTTG+GGG 0.553574 2.3:-57289485 MS.gene55944:CDS
TACATTGCAAATCATGGTGA+AGG 0.554565 2.3:-57290234 MS.gene55944:intron
GATGTGTCCCCTTGAATCCA+AGG 0.564896 2.3:+57288575 None:intergenic
CAATATTTCATGGAAGTGGA+AGG 0.568241 2.3:-57290360 None:intergenic
CCACTAACCTTGGCATCCAA+AGG 0.583224 2.3:+57289044 None:intergenic
GCTCCAAAGTGATGATGAGT+TGG 0.588477 2.3:-57290307 MS.gene55944:CDS
GTTGGTGTTCATAATTGTTG+GGG 0.592982 2.3:+57288871 None:intergenic
TGGATGCGCTCCACTAACCT+TGG 0.601618 2.3:+57289034 None:intergenic
ACTAATAATGGTTCACCAAG+TGG 0.601663 2.3:-57288974 MS.gene55944:CDS
ACTCCAGAGAATAGTAGCAA+TGG 0.604297 2.3:-57288815 MS.gene55944:CDS
ATTTGAGGGAACAATCCAGA+TGG 0.604631 2.3:+57288626 None:intergenic
TGAATCCGATGATGCAGCCG+CGG 0.612957 2.3:+57288790 None:intergenic
TGTTATAGGACTCAAACGAA+CGG 0.615232 2.3:-57289594 MS.gene55944:intron
GCAAGAGCTGTAGATTGAGA+TGG 0.621101 2.3:-57289571 MS.gene55944:CDS
TGGCATCCAAAGGTAGCGCA+TGG 0.621698 2.3:+57289054 None:intergenic
GTGACCGCTGTTGTACCACT+TGG 0.627383 2.3:+57288959 None:intergenic
AAAATTGCACAATACTTACC+GGG 0.631573 2.3:-57289175 MS.gene55944:CDS
TGGATCTTCGAAGAGGACCA+TGG 0.638658 2.3:-57290287 MS.gene55944:CDS
TTTGAGGGAACAATCCAGAT+GGG 0.640469 2.3:+57288627 None:intergenic
TGGTGAACCATTATTAGTGG+CGG 0.649612 2.3:+57288979 None:intergenic
GAGAGCAAGATCTTCATCGA+CGG 0.650210 2.3:+57290263 None:intergenic
AAACACTCCTTGGATTCAAG+GGG 0.650871 2.3:-57288582 MS.gene55944:CDS
GAATAGTAGCAATGGCGCCG+CGG 0.659766 2.3:-57288807 MS.gene55944:CDS
CTTCGTCCAGATGTTCGTCG+TGG 0.664020 2.3:-57289539 MS.gene55944:CDS
GATGAGTTGGATCTTCGAAG+AGG 0.682976 2.3:-57290294 MS.gene55944:CDS
TTCACCAAGTGGTACAACAG+CGG 0.730136 2.3:-57288963 MS.gene55944:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAACTATATATTTATATTA+TGG - chr2.3:57288744-57288763 MS.gene55944:CDS 10.0%
!!! TTTTTTACTTTATTTAATAC+GGG + chr2.3:57289178-57289197 None:intergenic 10.0%
!! AAAAACAAAATTTCTTCAAT+TGG + chr2.3:57289255-57289274 None:intergenic 15.0%
!!! AGAAATTTTGTTTTTGTTAT+AGG - chr2.3:57289260-57289279 MS.gene55944:intron 15.0%
!!! GTATATTTTTCTAGTTTTTA+TGG - chr2.3:57288711-57288730 MS.gene55944:CDS 15.0%
!!! TCTTTCTAATTTTAAAATGT+TGG - chr2.3:57289621-57289640 MS.gene55944:intron 15.0%
!!! TTTCTGTCTTTAATTTATTT+TGG - chr2.3:57289590-57289609 MS.gene55944:intron 15.0%
!! ATGAAATACCATATAACTAT+AGG - chr2.3:57289057-57289076 MS.gene55944:CDS 20.0%
!! CAATTAGAATACTTAAGTTA+TGG - chr2.3:57289468-57289487 MS.gene55944:intron 20.0%
!! CTAGTTAATTTCTATAATTG+TGG - chr2.3:57288853-57288872 MS.gene55944:CDS 20.0%
!! GGGCATAAATAAATTAATTA+TGG - chr2.3:57289032-57289051 MS.gene55944:CDS 20.0%
!! TATTTGATTGATCAATTAGA+TGG - chr2.3:57289667-57289686 MS.gene55944:intron 20.0%
! AAATACCATATAACTATAGG+TGG - chr2.3:57289060-57289079 MS.gene55944:CDS 25.0%
! ATCAATTACATTGCAAATCA+TGG - chr2.3:57288628-57288647 MS.gene55944:CDS 25.0%
! CTAACATAATCACTATCATA+TGG + chr2.3:57288972-57288991 None:intergenic 25.0%
! CTAATATTTAACGACGAATT+TGG + chr2.3:57289539-57289558 None:intergenic 25.0%
! TATGTTATATGTCGTATTGT+TGG + chr2.3:57289937-57289956 None:intergenic 25.0%
!!! GCTTTTTCCAAAAAATTGAT+TGG + chr2.3:57288917-57288936 None:intergenic 25.0%
!!! GTTGGTAATAATCAGAATTA+GGG + chr2.3:57290184-57290203 None:intergenic 25.0%
!!! TGTTGGTAATAATCAGAATT+AGG + chr2.3:57290185-57290204 None:intergenic 25.0%
AAAATTGCACAATACTTACC+GGG - chr2.3:57289693-57289712 MS.gene55944:intron 30.0%
AAGAAAAAAACCGCAAACTT+TGG + chr2.3:57288939-57288958 None:intergenic 30.0%
ACAACGAGATCAAGAATTAT+TGG - chr2.3:57289724-57289743 MS.gene55944:intron 30.0%
ATGAACACCAACAATTTATG+TGG - chr2.3:57290008-57290027 MS.gene55944:intron 30.0%
ATGTGAACCACATAAATTGT+TGG + chr2.3:57290018-57290037 None:intergenic 30.0%
CAAAATTGCACAATACTTAC+CGG - chr2.3:57289692-57289711 MS.gene55944:intron 30.0%
GATTATTACAATGTCCAAGT+TGG - chr2.3:57290140-57290159 MS.gene55944:intron 30.0%
TATGCCTTATATTAAAGTCC+TGG + chr2.3:57288995-57289014 None:intergenic 30.0%
TTAGCCAGGACTTTAATATA+AGG - chr2.3:57288988-57289007 MS.gene55944:CDS 30.0%
TTCATGATTGCAATTGTTGA+TGG - chr2.3:57288781-57288800 MS.gene55944:CDS 30.0%
! TATTGTTGTTACTACCAACT+TGG + chr2.3:57290157-57290176 None:intergenic 30.0%
! TGTTGGTGTTCATAATTGTT+GGG + chr2.3:57290001-57290020 None:intergenic 30.0%
! TTGTTGGTGTTCATAATTGT+TGG + chr2.3:57290002-57290021 None:intergenic 30.0%
!!! CATCACACCAATCAATTTTT+TGG - chr2.3:57288907-57288926 MS.gene55944:CDS 30.0%
ACTAATAATGGTTCACCAAG+TGG - chr2.3:57289894-57289913 MS.gene55944:intron 35.0%
ATGGAACTGAAATCCATTTG+AGG + chr2.3:57290260-57290279 None:intergenic 35.0%
CAATCATGAAACAGCTATAG+TGG + chr2.3:57288771-57288790 None:intergenic 35.0%
GCAGCCAAGCAATTATATAT+GGG + chr2.3:57289086-57289105 None:intergenic 35.0%
GTTATATGTCGTATTGTTGG+TGG + chr2.3:57289934-57289953 None:intergenic 35.0%
TACATTGCAAATCATGGTGA+AGG - chr2.3:57288634-57288653 MS.gene55944:CDS 35.0%
TCTTGAACTTCATAGTCGTT+GGG - chr2.3:57289382-57289401 MS.gene55944:intron 35.0%
TGCAGCCAAGCAATTATATA+TGG + chr2.3:57289087-57289106 None:intergenic 35.0%
TGCATGTATCTATTGCTTAC+CGG + chr2.3:57289412-57289431 None:intergenic 35.0%
TGGAACTGAAATCCATTTGA+GGG + chr2.3:57290259-57290278 None:intergenic 35.0%
TGTTATAGGACTCAAACGAA+CGG - chr2.3:57289274-57289293 MS.gene55944:intron 35.0%
TTCTTGAACTTCATAGTCGT+TGG - chr2.3:57289381-57289400 MS.gene55944:intron 35.0%
TTGGAAAAAGCCAAAGTTTG+CGG - chr2.3:57288926-57288945 MS.gene55944:CDS 35.0%
! ACTTGGTGAACCATTATTAG+TGG + chr2.3:57289895-57289914 None:intergenic 35.0%
! CATAGCGTTGAAGAAAATAG+TGG + chr2.3:57288821-57288840 None:intergenic 35.0%
! GTTGGTGTTCATAATTGTTG+GGG + chr2.3:57290000-57290019 None:intergenic 35.0%
! TCAAATGGATTTCAGTTCCA+TGG - chr2.3:57290259-57290278 MS.gene55944:CDS 35.0%
! TGAGTTGTTTGGCATGTTTT+TGG + chr2.3:57289761-57289780 None:intergenic 35.0%
! TGATAGTGATTATGTTAGCC+AGG - chr2.3:57288974-57288993 MS.gene55944:CDS 35.0%
!! CGGTAAGTATTGTGCAATTT+TGG + chr2.3:57289694-57289713 None:intergenic 35.0%
!! TACGTCACATTTGAGTTGTT+TGG + chr2.3:57289772-57289791 None:intergenic 35.0%
AAACACTCCTTGGATTCAAG+GGG - chr2.3:57290286-57290305 MS.gene55944:CDS 40.0%
AAGGCATATACTTCTGTGTG+TGG - chr2.3:57289007-57289026 MS.gene55944:CDS 40.0%
ACCAACAAGCTCAGCAATTT+GGG - chr2.3:57290198-57290217 MS.gene55944:intron 40.0%
ACTCCAGAGAATAGTAGCAA+TGG - chr2.3:57290053-57290072 MS.gene55944:intron 40.0%
ATATACTTCTGTGTGTGGTG+GGG - chr2.3:57289012-57289031 MS.gene55944:CDS 40.0%
ATCTGGATTGTTCCCTCAAA+TGG - chr2.3:57290244-57290263 MS.gene55944:CDS 40.0%
ATGGGCCACCTATAGTTATA+TGG + chr2.3:57289068-57289087 None:intergenic 40.0%
ATTTGAGGGAACAATCCAGA+TGG + chr2.3:57290245-57290264 None:intergenic 40.0%
CAAACACTCCTTGGATTCAA+GGG - chr2.3:57290285-57290304 MS.gene55944:CDS 40.0%
CATATACTTCTGTGTGTGGT+GGG - chr2.3:57289011-57289030 MS.gene55944:CDS 40.0%
CTGCATCATCGGATTCATTT+GGG - chr2.3:57290084-57290103 MS.gene55944:intron 40.0%
CTTGAACTTCATAGTCGTTG+GGG - chr2.3:57289383-57289402 MS.gene55944:intron 40.0%
GATCCAACTCATCATCACTT+TGG + chr2.3:57288567-57288586 None:intergenic 40.0%
GTGGCCCATATATAATTGCT+TGG - chr2.3:57289079-57289098 MS.gene55944:CDS 40.0%
GTTATAGGACTCAAACGAAC+GGG - chr2.3:57289275-57289294 MS.gene55944:intron 40.0%
TACCAACAAGCTCAGCAATT+TGG - chr2.3:57290197-57290216 MS.gene55944:intron 40.0%
TGAAACAAGACGAGAAGTGA+AGG + chr2.3:57288889-57288908 None:intergenic 40.0%
TGGTGAACCATTATTAGTGG+CGG + chr2.3:57289892-57289911 None:intergenic 40.0%
TTTGAGGGAACAATCCAGAT+GGG + chr2.3:57290244-57290263 None:intergenic 40.0%
!!! GTTTGGCATGTTTTTGGACA+CGG + chr2.3:57289755-57289774 None:intergenic 40.0%
!!! TTTGGCATGTTTTTGGACAC+GGG + chr2.3:57289754-57289773 None:intergenic 40.0%
ACCCAAATTGCTGAGCTTGT+TGG + chr2.3:57290202-57290221 None:intergenic 45.0%
ATCTCGTTGTCTGTTCTTCC+CGG + chr2.3:57289714-57289733 None:intergenic 45.0%
ATGTTACCACGACGAACATC+TGG + chr2.3:57289338-57289357 None:intergenic 45.0%
CAAATCATGGTGAAGGTCGA+TGG - chr2.3:57288641-57288660 MS.gene55944:CDS 45.0%
CCAAACACTCCTTGGATTCA+AGG - chr2.3:57290284-57290303 MS.gene55944:CDS 45.0%
GAGAGCAAGATCTTCATCGA+CGG + chr2.3:57288608-57288627 None:intergenic 45.0%
GCAAGAGCTGTAGATTGAGA+TGG - chr2.3:57289297-57289316 MS.gene55944:intron 45.0%
GCATATACTTCTGTGTGTGG+TGG - chr2.3:57289010-57289029 MS.gene55944:CDS 45.0%
GCTGCATCATCGGATTCATT+TGG - chr2.3:57290083-57290102 MS.gene55944:intron 45.0%
GGGACACATCTGACAATTTC+TGG - chr2.3:57290306-57290325 MS.gene55944:CDS 45.0%
TCTTGAGTCAATTCCGAGAC+AGG + chr2.3:57290122-57290141 None:intergenic 45.0%
TGAACCATTATTAGTGGCGG+TGG + chr2.3:57289889-57289908 None:intergenic 45.0%
TTCACCAAGTGGTACAACAG+CGG - chr2.3:57289905-57289924 MS.gene55944:intron 45.0%
TTCATAGTCGTTGGGGAAAC+CGG - chr2.3:57289390-57289409 MS.gene55944:intron 45.0%
! GATGAGTTGGATCTTCGAAG+AGG - chr2.3:57288574-57288593 MS.gene55944:CDS 45.0%
! GCTCCAAAGTGATGATGAGT+TGG - chr2.3:57288561-57288580 MS.gene55944:CDS 45.0%
!! CCTTGAATCCAAGGAGTGTT+TGG + chr2.3:57290287-57290306 None:intergenic 45.0%
!! CTCATCATCACTTTGGAGCA+TGG + chr2.3:57288560-57288579 None:intergenic 45.0%
!!! TTTTTTTACTTTATTTAATA+CGG + chr2.3:57289179-57289198 None:intergenic 5.0%
AAGATGCCATGCGCTACCTT+TGG - chr2.3:57289808-57289827 MS.gene55944:intron 50.0%
AGATCTTCATCGACGGTCCA+TGG + chr2.3:57288601-57288620 None:intergenic 50.0%
ATTATTAGTGGCGGTGGCTC+GGG + chr2.3:57289883-57289902 None:intergenic 50.0%
CATTATTAGTGGCGGTGGCT+CGG + chr2.3:57289884-57289903 None:intergenic 50.0%
CCACTAACCTTGGCATCCAA+AGG + chr2.3:57289827-57289846 None:intergenic 50.0%
CCATGGAACCAAACACTCCT+TGG - chr2.3:57290276-57290295 MS.gene55944:CDS 50.0%
CCTTTGGATGCCAAGGTTAG+TGG - chr2.3:57289824-57289843 MS.gene55944:intron 50.0%
GACACAAGTTTCGCCTGTCT+CGG - chr2.3:57290106-57290125 MS.gene55944:intron 50.0%
GATGTGTCCCCTTGAATCCA+AGG + chr2.3:57290296-57290315 None:intergenic 50.0%
GATTGCATCACTAGCCCATC+TGG - chr2.3:57290227-57290246 MS.gene55944:intron 50.0%
GCGCCATTGCTACTATTCTC+TGG + chr2.3:57290059-57290078 None:intergenic 50.0%
TGGATCTTCGAAGAGGACCA+TGG - chr2.3:57288581-57288600 MS.gene55944:CDS 50.0%
!! CCAAGGAGTGTTTGGTTCCA+TGG + chr2.3:57290279-57290298 None:intergenic 50.0%
CGAGCCACCGCCACTAATAA+TGG - chr2.3:57289882-57289901 MS.gene55944:intron 55.0%
CTTCGTCCAGATGTTCGTCG+TGG - chr2.3:57289329-57289348 MS.gene55944:intron 55.0%
GAACACTCTGCTCGTTCAGC+TGG - chr2.3:57288663-57288682 MS.gene55944:CDS 55.0%
GAATAGTAGCAATGGCGCCG+CGG - chr2.3:57290061-57290080 MS.gene55944:intron 55.0%
GTGACCGCTGTTGTACCACT+TGG + chr2.3:57289912-57289931 None:intergenic 55.0%
TGAATCCGATGATGCAGCCG+CGG + chr2.3:57290081-57290100 None:intergenic 55.0%
TGCGCTACCTTTGGATGCCA+AGG - chr2.3:57289817-57289836 MS.gene55944:intron 55.0%
TGGATGCGCTCCACTAACCT+TGG + chr2.3:57289837-57289856 None:intergenic 55.0%
TGGCATCCAAAGGTAGCGCA+TGG + chr2.3:57289817-57289836 None:intergenic 55.0%
! ATTAGTGGCGGTGGCTCGGG+TGG + chr2.3:57289880-57289899 None:intergenic 65.0%
CGGAGGTGGATGCGGCAGCT+TGG + chr2.3:57289857-57289876 None:intergenic 70.0%
TGGCGCCGCGGCTGCATCAT+CGG - chr2.3:57290073-57290092 MS.gene55944:intron 70.0%
!! TCGGGTGGCGGAGGTGGATG+CGG + chr2.3:57289865-57289884 None:intergenic 70.0%
! AGTGGCGGTGGCTCGGGTGG+CGG + chr2.3:57289877-57289896 None:intergenic 75.0%
!!! GGTGGCTCGGGTGGCGGAGG+TGG + chr2.3:57289871-57289890 None:intergenic 80.0%
!! GGCGGTGGCTCGGGTGGCGG+AGG + chr2.3:57289874-57289893 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 57288517 57290373 57288517 ID=MS.gene55944
chr2.3 mRNA 57288517 57290373 57288517 ID=MS.gene55944.t1;Parent=MS.gene55944
chr2.3 exon 57290235 57290373 57290235 ID=MS.gene55944.t1.exon1;Parent=MS.gene55944.t1
chr2.3 CDS 57290235 57290373 57290235 ID=cds.MS.gene55944.t1;Parent=MS.gene55944.t1
chr2.3 exon 57289479 57289608 57289479 ID=MS.gene55944.t1.exon2;Parent=MS.gene55944.t1
chr2.3 CDS 57289479 57289608 57289479 ID=cds.MS.gene55944.t1;Parent=MS.gene55944.t1
chr2.3 exon 57288517 57289204 57288517 ID=MS.gene55944.t1.exon3;Parent=MS.gene55944.t1
chr2.3 CDS 57288517 57289204 57288517 ID=cds.MS.gene55944.t1;Parent=MS.gene55944.t1
Gene Sequence

>MS.gene55944

ATGGAAGTGGAAGGAAGTGTAATAAGCAACTCGAACATCACCATGCTCCAAAGTGATGATGAGTTGGATCTTCGAAGAGGACCATGGACCGTCGATGAAGATCTTGCTCTCATCAATTACATTGCAAATCATGGTGAAGGTCGATGGAACACTCTGCTCGTTCAGCTGGTAATTCATAACTTTTTTTCTTTCATGTATATTTTTCTAGTTTTTATGGAAGAATAATAAGAACTATATATTTATATTATGGACCACTATAGCTGTTTCATGATTGCAATTGTTGATGGAAAATCATATACTTCCACTATTTTCTTCAACGCTATGCTTGATTTCTAGCTAGTTAATTTCTATAATTGTGGTGTGAAAGCTCCTTCACTTCTCGTCTTGTTTCATCACACCAATCAATTTTTTGGAAAAAGCCAAAGTTTGCGGTTTTTTTCTTATGAAGAGCACCATATGATAGTGATTATGTTAGCCAGGACTTTAATATAAGGCATATACTTCTGTGTGTGGTGGGGCATAAATAAATTAATTATGGAAATGAAATACCATATAACTATAGGTGGCCCATATATAATTGCTTGGCTGCATCACGTTTATGAAAATAGAAAAGAATAATGAATTTGAATTTGATACTACAACGCAATATCATATATTTCCCGTATTAAATAAAGTAAAAAAAATTTGCTCTTTATTTTACTTGATTTGTTTTTGCTTGCATTCTTGAAAACTTTACCAATTGAAGAAATTTTGTTTTTGTTATAGGACTCAAACGAACGGGCAAGAGCTGTAGATTGAGATGGTTGAATTATCTTCGTCCAGATGTTCGTCGTGGTAACATCACACTTGAAGAACAACTTCTTATTCTTGAACTTCATAGTCGTTGGGGAAACCGGTAAGCAATAGATACATGCATACAAACATACACATCAAAGTTATATTATTTTGTTGCAATTAGAATACTTAAGTTATGGACTAAAATTTATTATTACAGAAAAAGAAGAAAAAAAAAAATCTTTCCAAATTCGTCGTTAAATATTAGAGACGCGAAATTAGAAATAAATTTCATTTTTTTTCTGTCTTTAATTTATTTTGGTAATTTAATCTTTCTAATTTTAAAATGTTGGTCAAATTATTGTGTCTAATTAATTATTTGATTGATCAATTAGATGGTCCAAAATTGCACAATACTTACCGGGAAGAACAGACAACGAGATCAAGAATTATTGGAGAACCCGTGTCCAAAAACATGCCAAACAACTCAAATGTGACGTAAACAGTAAGCAATTCAAAGATGCCATGCGCTACCTTTGGATGCCAAGGTTAGTGGAGCGCATCCAAGCTGCCGCATCCACCTCCGCCACCCGAGCCACCGCCACTAATAATGGTTCACCAAGTGGTACAACAGCGGTCACCACCAACAATACGACATATAACATAAACAACAATTTTGATGTTCATAGTAGCGCGAACATGTTAACCCCAACAATTATGAACACCAACAATTTATGTGGTTCACATGTTACACAACGTTATACTCCAGAGAATAGTAGCAATGGCGCCGCGGCTGCATCATCGGATTCATTTGGGACACAAGTTTCGCCTGTCTCGGAATTGACTCAAGATTATTACAATGTCCAAGTTGGTAGTAACAACAATAATAACCCTAATTCTGATTATTACCAACAAGCTCAGCAATTTGGGTTTTTTGATTGCATCACTAGCCCATCTGGATTGTTCCCTCAAATGGATTTCAGTTCCATGGAACCAAACACTCCTTGGATTCAAGGGGACACATCTGACAATTTCTGGAATGTTGAAAACATGTTACTCTTTCAACATCTCAATGACATGTGA
Protein sequence

>MS.gene55944.t1

MEVEGSVISNSNITMLQSDDELDLRRGPWTVDEDLALINYIANHGEGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDAMRYLWMPRLVERIQAAASTSATRATATNNGSPSGTTAVTTNNTTYNINNNFDVHSSANMLTPTIMNTNNLCGSHVTQRYTPENSSNGAAAASSDSFGTQVSPVSELTQDYYNVQVGSNNNNNPNSDYYQQAQQFGFFDCITSPSGLFPQMDFSSMEPNTPWIQGDTSDNFWNVENMLLFQHLNDM