Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56180.t1 | XP_003588445.2 | 96.2 | 560 | 17 | 4 | 1 | 559 | 18 | 574 | 6.70E-300 | 1039.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56180.t1 | Q8L5Z4 | 74.2 | 500 | 128 | 1 | 60 | 559 | 86 | 584 | 2.4e-213 | 743.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56180.t1 | G7I278 | 96.2 | 560 | 17 | 4 | 1 | 559 | 18 | 574 | 4.8e-300 | 1039.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene56180 | 0.811352 | 7.31E-51 | -1.69E-46 |
| MS.gene050333 | MS.gene56180 | 0.801079 | 1.07E-48 | -1.69E-46 |
| MS.gene050772 | MS.gene56180 | 0.818449 | 1.95E-52 | -1.69E-46 |
| MS.gene053912 | MS.gene56180 | 0.81731 | 3.52E-52 | -1.69E-46 |
| MS.gene056549 | MS.gene56180 | 0.805867 | 1.08E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56180.t1 | MTR_1g007320 | 96.250 | 560 | 17 | 4 | 1 | 559 | 18 | 574 | 0.0 | 1089 |
| MS.gene56180.t1 | MTR_1g007320 | 92.679 | 560 | 16 | 5 | 1 | 559 | 18 | 553 | 0.0 | 1036 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56180.t1 | AT2G25870 | 74.438 | 489 | 124 | 1 | 71 | 559 | 97 | 584 | 0.0 | 730 |
| MS.gene56180.t1 | AT5G38747 | 57.627 | 59 | 22 | 1 | 366 | 424 | 73 | 128 | 1.53e-14 | 71.6 |
Find 0 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAAATATAAATATAT+AGG | - | 8631:37013-37032 | MS.gene56180:intron | 0.0% |
| !! | AAGAAAAATATAATAAAACA+AGG | + | 8631:36718-36737 | None:intergenic | 10.0% |
| !! | AGAAAAAAAAAATAATTCTA+AGG | + | 8631:38628-38647 | None:intergenic | 10.0% |
| !! | TATAAATTATACTATAATTG+AGG | + | 8631:38503-38522 | None:intergenic | 10.0% |
| !! | TTCAATTAAAAACAAAAAAA+AGG | + | 8631:35973-35992 | None:intergenic | 10.0% |
| !! | TTTACAAATAAAGTAATTAA+AGG | - | 8631:37121-37140 | MS.gene56180:CDS | 10.0% |
| !!! | TATTTTATTCATTCTTTTTT+GGG | - | 8631:34470-34489 | MS.gene56180:CDS | 10.0% |
| !! | AAAAACAAAAAAAAGGATAA+TGG | + | 8631:35966-35985 | None:intergenic | 15.0% |
| !! | AAAATAAATAGCTTAAAACA+TGG | + | 8631:36148-36167 | None:intergenic | 15.0% |
| !! | AAGATACAATTATATTATGT+TGG | - | 8631:34066-34085 | MS.gene56180:intron | 15.0% |
| !! | GAAATTAAAAGTTAAAGTAA+CGG | - | 8631:35203-35222 | MS.gene56180:intron | 15.0% |
| !! | TTATTATGTTAACTCAAATA+TGG | + | 8631:39146-39165 | None:intergenic | 15.0% |
| !! | TTTCAGAATATATATACTTT+AGG | + | 8631:38133-38152 | None:intergenic | 15.0% |
| !!! | CTATTTTATTCATTCTTTTT+TGG | - | 8631:34469-34488 | MS.gene56180:CDS | 15.0% |
| !!! | TAAAATTGATGTCATATTTT+AGG | + | 8631:39554-39573 | None:intergenic | 15.0% |
| !!! | TTAAGTATCATATATCTTTT+TGG | - | 8631:37432-37451 | MS.gene56180:intron | 15.0% |
| !!! | TTATTTTCATTAACAAAAGT+TGG | - | 8631:35101-35120 | MS.gene56180:CDS | 15.0% |
| !! | AACTTGTATGTGATATTTAT+TGG | + | 8631:38678-38697 | None:intergenic | 20.0% |
| !! | AATGTTCCTTTATATAATAC+AGG | + | 8631:35997-36016 | None:intergenic | 20.0% |
| !! | AATTTAGTCCTTGAAATATT+TGG | + | 8631:39603-39622 | None:intergenic | 20.0% |
| !! | AATTTATGATATGCAGATAA+TGG | - | 8631:39794-39813 | MS.gene56180:CDS | 20.0% |
| !! | AGATATATGATACTTAAAAG+CGG | + | 8631:37429-37448 | None:intergenic | 20.0% |
| !! | ATTTGCACAAAAAAAATATG+GGG | - | 8631:35807-35826 | MS.gene56180:intron | 20.0% |
| !! | CATTTGCACAAAAAAAATAT+GGG | - | 8631:35806-35825 | MS.gene56180:intron | 20.0% |
| !! | CTGAAAAAAAGATTAAAATG+AGG | + | 8631:35517-35536 | None:intergenic | 20.0% |
| !! | GTTTATACAAAAACTTAACA+AGG | - | 8631:34670-34689 | MS.gene56180:intron | 20.0% |
| !! | TAATTTGAACATTGTGAATT+AGG | - | 8631:36263-36282 | MS.gene56180:intron | 20.0% |
| !! | TAGAATGTAAGTAATCATAT+AGG | + | 8631:38360-38379 | None:intergenic | 20.0% |
| !! | TAGTAATCAAACGATTATTT+AGG | - | 8631:33833-33852 | MS.gene56180:intron | 20.0% |
| !! | TATAAATGTGGATATTCATA+TGG | - | 8631:36219-36238 | MS.gene56180:intron | 20.0% |
| !! | TATCTGCATATCATAAATTT+GGG | + | 8631:39793-39812 | None:intergenic | 20.0% |
| !! | TATTTAACTATTACAGTCTT+TGG | + | 8631:36909-36928 | None:intergenic | 20.0% |
| !! | TGCATTGAATAAGATTATTT+AGG | - | 8631:39716-39735 | MS.gene56180:CDS | 20.0% |
| !! | TTAAGAGAAAAATACTTTAC+AGG | - | 8631:38401-38420 | MS.gene56180:intron | 20.0% |
| !! | TTATCTGCATATCATAAATT+TGG | + | 8631:39794-39813 | None:intergenic | 20.0% |
| !! | TTGAATCCTGTATTATATAA+AGG | - | 8631:35988-36007 | MS.gene56180:intron | 20.0% |
| !! | TTGTTATGAAAAACTGAAAA+AGG | + | 8631:37760-37779 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTGTTTTTCTCAT+TGG | + | 8631:38009-38028 | None:intergenic | 20.0% |
| !!! | ATTAATTTGAAGCTTGAAAT+AGG | - | 8631:34312-34331 | MS.gene56180:intron | 20.0% |
| !!! | CTCATTTTAATCTTTTTTTC+AGG | - | 8631:35515-35534 | MS.gene56180:intron | 20.0% |
| !!! | GACATCAATTTTATTTTACA+AGG | - | 8631:39561-39580 | MS.gene56180:intron | 20.0% |
| !!! | GCAATTTTCTAATATAAATG+TGG | - | 8631:36207-36226 | MS.gene56180:intron | 20.0% |
| !!! | TGTGATAGATATTTTTAAGA+AGG | - | 8631:36296-36315 | MS.gene56180:intron | 20.0% |
| !!! | TGTTTTTTGTTTTTCTCATT+GGG | + | 8631:38008-38027 | None:intergenic | 20.0% |
| !!! | TTAATTTCTCTCTTTTGAAA+TGG | + | 8631:35191-35210 | None:intergenic | 20.0% |
| !!! | TTAATTTGAAGCTTGAAATA+GGG | - | 8631:34313-34332 | MS.gene56180:intron | 20.0% |
| !!! | TTTTTGTTATGTAGAAAACT+GGG | + | 8631:38079-38098 | None:intergenic | 20.0% |
| ! | AACATGAACCAAATATTTCA+AGG | - | 8631:39592-39611 | MS.gene56180:intron | 25.0% |
| ! | AATATAAAGCAAACATCACA+AGG | + | 8631:39490-39509 | None:intergenic | 25.0% |
| ! | ATAAAACCAAAATACCATAC+TGG | + | 8631:35759-35778 | None:intergenic | 25.0% |
| ! | ATAATGTTTCATAAGCAATG+GGG | + | 8631:37883-37902 | None:intergenic | 25.0% |
| ! | ATACAAACTTGAAACTTAGA+TGG | - | 8631:34809-34828 | MS.gene56180:intron | 25.0% |
| ! | ATATTATAAAACCAACCATG+AGG | + | 8631:34966-34985 | None:intergenic | 25.0% |
| ! | ATCCAAACAAATATCCTTTA+TGG | + | 8631:36633-36652 | None:intergenic | 25.0% |
| ! | ATCTGCATATCATAAATTTG+GGG | + | 8631:39792-39811 | None:intergenic | 25.0% |
| ! | ATCTTGCTAACAATTACATT+TGG | - | 8631:38822-38841 | MS.gene56180:CDS | 25.0% |
| ! | CATAATGTTTCATAAGCAAT+GGG | + | 8631:37884-37903 | None:intergenic | 25.0% |
| ! | CCATTTGCACAAAAAAAATA+TGG | - | 8631:35805-35824 | MS.gene56180:intron | 25.0% |
| ! | GAAAATGCAATTCTTACAAT+AGG | + | 8631:34764-34783 | None:intergenic | 25.0% |
| ! | TAATTAAAGGCTATGAATGA+AGG | - | 8631:37134-37153 | MS.gene56180:intron | 25.0% |
| ! | TACAAAAACTTAACAAGGAA+TGG | - | 8631:34675-34694 | MS.gene56180:intron | 25.0% |
| ! | TATTCATTGTTCTCTATTGA+AGG | - | 8631:38538-38557 | MS.gene56180:CDS | 25.0% |
| ! | TGCACTTACTTACTAAATAA+TGG | - | 8631:35243-35262 | MS.gene56180:intron | 25.0% |
| ! | TGTAGTCAATGAACATAATA+TGG | + | 8631:37958-37977 | None:intergenic | 25.0% |
| ! | TTAAAAATATCTATCACAGC+TGG | + | 8631:36294-36313 | None:intergenic | 25.0% |
| ! | TTTGCACAAAAAAAATATGG+GGG | - | 8631:35808-35827 | MS.gene56180:intron | 25.0% |
| !! | ACTTATGAATTATGATGATG+AGG | + | 8631:34789-34808 | None:intergenic | 25.0% |
| !! | TATCAGAAACTACATTTTGT+TGG | + | 8631:37554-37573 | None:intergenic | 25.0% |
| !! | TTTCATTTTCTTCTACTTGT+GGG | - | 8631:35381-35400 | MS.gene56180:intron | 25.0% |
| !! | TTTTGTGATCATATTTCACA+CGG | - | 8631:39236-39255 | MS.gene56180:intron | 25.0% |
| !!! | CCATATTTTTTTTGTGCAAA+TGG | + | 8631:35808-35827 | None:intergenic | 25.0% |
| !!! | CTTTTTGTTATGTAGAAAAC+TGG | + | 8631:38080-38099 | None:intergenic | 25.0% |
| !!! | GATAGATATTTTTAAGAAGG+TGG | - | 8631:36299-36318 | MS.gene56180:intron | 25.0% |
| !!! | TATTTTTTTTGTGCAAATGG+AGG | + | 8631:35805-35824 | None:intergenic | 25.0% |
| AAACTTTCTTCGATGCAAAT+AGG | + | 8631:33705-33724 | None:intergenic | 30.0% | |
| AAATCCATCAATTGTGTTCA+TGG | - | 8631:39665-39684 | MS.gene56180:intron | 30.0% | |
| AAATGTTGTCCAGTTTCAAT+TGG | - | 8631:34258-34277 | MS.gene56180:intron | 30.0% | |
| AACAAGTGGATCATGAAAAA+GGG | + | 8631:38286-38305 | None:intergenic | 30.0% | |
| AACTTTCTTCGATGCAAATA+GGG | + | 8631:33704-33723 | None:intergenic | 30.0% | |
| AAGTAACTAACCAAGATTTC+AGG | + | 8631:33738-33757 | None:intergenic | 30.0% | |
| AAGTCATGTGAAATAGTTTG+TGG | - | 8631:34361-34380 | MS.gene56180:intron | 30.0% | |
| AATAAAGTCCAAAACGACAA+AGG | + | 8631:37817-37836 | None:intergenic | 30.0% | |
| AATGATAGAAACTGTGATAG+TGG | + | 8631:37595-37614 | None:intergenic | 30.0% | |
| ACCATCAATTTAGTCTCTAA+AGG | - | 8631:33982-34001 | MS.gene56180:intron | 30.0% | |
| ACTACTAGAACTAATAGAGT+GGG | + | 8631:33817-33836 | None:intergenic | 30.0% | |
| AGAAACAGAATAGAGTAAGA+TGG | - | 8631:37243-37262 | MS.gene56180:intron | 30.0% | |
| ATAGATGAATTGTCAAAGAC+AGG | - | 8631:35842-35861 | MS.gene56180:intron | 30.0% | |
| ATGATAGAAACTGTGATAGT+GGG | + | 8631:37594-37613 | None:intergenic | 30.0% | |
| ATGATCACAAAATCATGTCA+TGG | + | 8631:39228-39247 | None:intergenic | 30.0% | |
| ATGGTATTCTGACAAATCAT+GGG | + | 8631:36129-36148 | None:intergenic | 30.0% | |
| ATGTAGTATGATTGCTAATG+AGG | - | 8631:39335-39354 | MS.gene56180:intron | 30.0% | |
| CAGTCAATACAAACTTGTAT+GGG | + | 8631:38726-38745 | None:intergenic | 30.0% | |
| CCATAATGTTTCATAAGCAA+TGG | + | 8631:37885-37904 | None:intergenic | 30.0% | |
| CCATTGCTTATGAAACATTA+TGG | - | 8631:37882-37901 | MS.gene56180:intron | 30.0% | |
| CTCGAGTAGAAATAAATTGT+TGG | - | 8631:35319-35338 | MS.gene56180:intron | 30.0% | |
| GAACATAATATGGCTATTGA+GGG | + | 8631:37948-37967 | None:intergenic | 30.0% | |
| GACAACAAAATAAATGTGTG+AGG | + | 8631:39065-39084 | None:intergenic | 30.0% | |
| GAGATATTCGATGACAATTA+TGG | - | 8631:36607-36626 | MS.gene56180:intron | 30.0% | |
| GATAGAAATAATCACTGAAG+AGG | - | 8631:33883-33902 | MS.gene56180:intron | 30.0% | |
| TAAGTGCATTTGAAAGTTCT+TGG | + | 8631:35231-35250 | None:intergenic | 30.0% | |
| TACTACTAGAACTAATAGAG+TGG | + | 8631:33818-33837 | None:intergenic | 30.0% | |
| TATATCTTCTGTGATATGGA+TGG | - | 8631:35907-35926 | MS.gene56180:intron | 30.0% | |
| TCAAGGACTAAATTAGAACA+AGG | - | 8631:39609-39628 | MS.gene56180:intron | 30.0% | |
| TCACACGTACATAAACTAAA+AGG | + | 8631:39394-39413 | None:intergenic | 30.0% | |
| TCATGAAATCCAATTGAAAC+TGG | + | 8631:34270-34289 | None:intergenic | 30.0% | |
| TGAACATAATATGGCTATTG+AGG | + | 8631:37949-37968 | None:intergenic | 30.0% | |
| TGATCATGAATTAAGTGAAG+AGG | - | 8631:35566-35585 | MS.gene56180:intron | 30.0% | |
| TTCAATTGGATTTCATGATC+AGG | - | 8631:34272-34291 | MS.gene56180:intron | 30.0% | |
| TTGGAGATAACTTAATCTCT+TGG | - | 8631:37451-37470 | MS.gene56180:intron | 30.0% | |
| TTGGTATCATACATATAGAG+TGG | - | 8631:39118-39137 | MS.gene56180:intron | 30.0% | |
| ! | AATTACCATCTGAACTGTTT+TGG | + | 8631:35701-35720 | None:intergenic | 30.0% |
| ! | AGTCATGTGAAATAGTTTGT+GGG | - | 8631:34362-34381 | MS.gene56180:intron | 30.0% |
| ! | ATTGTTTCAGAATTTTCTCC+TGG | - | 8631:36342-36361 | MS.gene56180:intron | 30.0% |
| ! | CTTTATTTGCAGCTTATGTT+GGG | - | 8631:34862-34881 | MS.gene56180:intron | 30.0% |
| ! | GTTTCATTTTCTTCTACTTG+TGG | - | 8631:35380-35399 | MS.gene56180:intron | 30.0% |
| ! | TATGAATTATGATGATGAGG+TGG | + | 8631:34786-34805 | None:intergenic | 30.0% |
| ! | TCCTTTAGAGACTAAATTGA+TGG | + | 8631:33986-34005 | None:intergenic | 30.0% |
| ! | TGTTTTTCTCATTGGGTAAA+AGG | + | 8631:38001-38020 | None:intergenic | 30.0% |
| ! | TTCATTTTCTTCTACTTGTG+GGG | - | 8631:35382-35401 | MS.gene56180:intron | 30.0% |
| ! | TTGTCTTTTTCTCTCAAACT+CGG | - | 8631:39080-39099 | MS.gene56180:intron | 30.0% |
| ! | TTGTTTCAGAATTTTCTCCT+GGG | - | 8631:36343-36362 | MS.gene56180:intron | 30.0% |
| ! | TTTTATTGCAGTTGTCTTTG+AGG | + | 8631:38757-38776 | None:intergenic | 30.0% |
| !! | AGGAAAAGTATTGGATTGTT+TGG | - | 8631:37332-37351 | MS.gene56180:CDS | 30.0% |
| !! | GGAAAAGTATTGGATTGTTT+GGG | - | 8631:37333-37352 | MS.gene56180:CDS | 30.0% |
| !! | GGTTTTAATCTCTGAAAAAC+AGG | - | 8631:39427-39446 | MS.gene56180:intron | 30.0% |
| !!! | TAATCTTTTTTTCAGGTCCA+TGG | - | 8631:35522-35541 | MS.gene56180:intron | 30.0% |
| !!! | TCTGAAATGTCATTTTTTGC+AGG | - | 8631:38146-38165 | MS.gene56180:intron | 30.0% |
| !!! | TTTTTTGATAGTCTGTACTC+TGG | - | 8631:34112-34131 | MS.gene56180:intron | 30.0% |
| AAAGGAATTCATCAAGCACT+TGG | + | 8631:34846-34865 | None:intergenic | 35.0% | |
| AACCAAGATTTCAGGATCAT+CGG | + | 8631:33730-33749 | None:intergenic | 35.0% | |
| AAGTTAGCAATTCCAGATAG+TGG | - | 8631:36863-36882 | MS.gene56180:intron | 35.0% | |
| AAGTTGTCAACATTACTCAG+TGG | - | 8631:36585-36604 | MS.gene56180:intron | 35.0% | |
| AATTTCTACTTCAACTGCCA+AGG | - | 8631:36035-36054 | MS.gene56180:intron | 35.0% | |
| ACGTGTGACACACTATTTAT+TGG | - | 8631:39406-39425 | MS.gene56180:intron | 35.0% | |
| AGGTGAAATGTCAAACTACA+AGG | + | 8631:38608-38627 | None:intergenic | 35.0% | |
| AGTAGAAATGGAGAAAGAAG+AGG | - | 8631:35593-35612 | MS.gene56180:intron | 35.0% | |
| AGTTAGCAATTCCAGATAGT+GGG | - | 8631:36864-36883 | MS.gene56180:intron | 35.0% | |
| ATTAATCATCCATTGAGCTG+AGG | - | 8631:39280-39299 | MS.gene56180:intron | 35.0% | |
| ATTACCTGTAAAAAAACCCC+AGG | + | 8631:36363-36382 | None:intergenic | 35.0% | |
| CAAAACATGTAGCAAGTAAC+CGG | + | 8631:34197-34216 | None:intergenic | 35.0% | |
| CAACAAGTGGATCATGAAAA+AGG | + | 8631:38287-38306 | None:intergenic | 35.0% | |
| CAGAAGATATAGCTGAACTT+TGG | + | 8631:35898-35917 | None:intergenic | 35.0% | |
| CAGCTATATCTTCTGTGATA+TGG | - | 8631:35903-35922 | MS.gene56180:intron | 35.0% | |
| CATATAGGATCCCAATAATG+AGG | + | 8631:38345-38364 | None:intergenic | 35.0% | |
| CATGGTATTCTGACAAATCA+TGG | + | 8631:36130-36149 | None:intergenic | 35.0% | |
| CCAACATAAGCTGCAAATAA+AGG | + | 8631:34864-34883 | None:intergenic | 35.0% | |
| CCTTCACAAAATGCAATAAG+TGG | + | 8631:38252-38271 | None:intergenic | 35.0% | |
| CTCATCATTACAAAGAAGCA+CGG | + | 8631:34651-34670 | None:intergenic | 35.0% | |
| GATACTGCTATAGATGATGT+TGG | - | 8631:34602-34621 | MS.gene56180:intron | 35.0% | |
| GATGACAATTATGGCCATAA+AGG | - | 8631:36616-36635 | MS.gene56180:intron | 35.0% | |
| GCAATCATACTACATTTGCA+TGG | + | 8631:39330-39349 | None:intergenic | 35.0% | |
| GCAGTCAATACAAACTTGTA+TGG | + | 8631:38727-38746 | None:intergenic | 35.0% | |
| GGAAAACATGTTGAATCTGA+TGG | + | 8631:39207-39226 | None:intergenic | 35.0% | |
| GGCCATAAAGGATATTTGTT+TGG | - | 8631:36628-36647 | MS.gene56180:intron | 35.0% | |
| GTTGAAGCTTGAGATACAAA+AGG | - | 8631:35341-35360 | MS.gene56180:intron | 35.0% | |
| TAAAACCAACCATGAGGATA+CGG | + | 8631:34960-34979 | None:intergenic | 35.0% | |
| TAAGCAATGGGGAAATAAAG+TGG | + | 8631:37872-37891 | None:intergenic | 35.0% | |
| TACAATATACCACGAACCAA+AGG | - | 8631:38317-38336 | MS.gene56180:intron | 35.0% | |
| TCAGAATGCATATCGATAGA+TGG | + | 8631:39958-39977 | None:intergenic | 35.0% | |
| TCATAGACACAATTCGAACT+CGG | - | 8631:37041-37060 | MS.gene56180:intron | 35.0% | |
| TCGGAAAGTGAAAGTAAGAT+TGG | - | 8631:39099-39118 | MS.gene56180:intron | 35.0% | |
| TGTAAGGAAGATAAGGCATA+GGG | + | 8631:37634-37653 | None:intergenic | 35.0% | |
| TTAATCATCCATTGAGCTGA+GGG | - | 8631:39281-39300 | MS.gene56180:intron | 35.0% | |
| TTGCTTGTTTATGGTAGACA+AGG | - | 8631:37671-37690 | MS.gene56180:intron | 35.0% | |
| TTGTCCATGAACACAATTGA+TGG | + | 8631:39672-39691 | None:intergenic | 35.0% | |
| TTGTGTTACACTTCTGCAAA+AGG | - | 8631:35025-35044 | MS.gene56180:intron | 35.0% | |
| TTGTTTATGGTAGACAAGGT+CGG | - | 8631:37675-37694 | MS.gene56180:intron | 35.0% | |
| TTTGTGTTTCTTGTATGTGC+AGG | - | 8631:38197-38216 | MS.gene56180:intron | 35.0% | |
| ! | AATACTTTTCCTGCCAAACA+AGG | + | 8631:37324-37343 | None:intergenic | 35.0% |
| ! | AATAGTTTGTGGGAACTTCA+TGG | - | 8631:34372-34391 | MS.gene56180:intron | 35.0% |
| ! | ATACTTTTCCTGCCAAACAA+GGG | + | 8631:37323-37342 | None:intergenic | 35.0% |
| ! | CCACTTATTGCATTTTGTGA+AGG | - | 8631:38249-38268 | MS.gene56180:intron | 35.0% |
| ! | CCTTTATTTGCAGCTTATGT+TGG | - | 8631:34861-34880 | MS.gene56180:intron | 35.0% |
| ! | GATATGCAGATAATGGCTAT+TGG | - | 8631:39801-39820 | MS.gene56180:CDS | 35.0% |
| ! | GCTTTCTGTCATCATTGTTT+TGG | - | 8631:39457-39476 | MS.gene56180:intron | 35.0% |
| ! | TCTTTACTCTTTGGAGAGTA+AGG | - | 8631:38224-38243 | MS.gene56180:intron | 35.0% |
| ! | TCTTTTTCCATACCAGGAAA+GGG | - | 8631:38561-38580 | MS.gene56180:intron | 35.0% |
| ! | TGTGAACCAGTATGGTATTT+TGG | - | 8631:35750-35769 | MS.gene56180:intron | 35.0% |
| ! | TGTTTCAGAATTTTCTCCTG+GGG | - | 8631:36344-36363 | MS.gene56180:intron | 35.0% |
| ! | TTGGTTCGTGGTATATTGTA+TGG | + | 8631:38317-38336 | None:intergenic | 35.0% |
| ! | TTGTTTGGCAGGAAAAGTAT+TGG | - | 8631:37323-37342 | MS.gene56180:CDS | 35.0% |
| ! | TTTAAGAAGGTGGATTTAGC+TGG | - | 8631:36309-36328 | MS.gene56180:intron | 35.0% |
| ! | TTTATTGCAAAGGTTAGCTG+TGG | - | 8631:37831-37850 | MS.gene56180:CDS | 35.0% |
| !! | ACAACATCTTACTTTTCCAG+TGG | + | 8631:36103-36122 | None:intergenic | 35.0% |
| !! | CGTTTTGGACTTTATTGCAA+AGG | - | 8631:37821-37840 | MS.gene56180:CDS | 35.0% |
| !!! | CAAGAATTCCTGTTTTGATC+CGG | - | 8631:34175-34194 | MS.gene56180:intron | 35.0% |
| !!! | CATGGCTTGTTACATCTTTT+GGG | - | 8631:35540-35559 | MS.gene56180:intron | 35.0% |
| AACTCCTTCTTGTTCCTCTT+CGG | + | 8631:33669-33688 | None:intergenic | 40.0% | |
| AAGTGAGTTCCCATATGAAG+AGG | - | 8631:33913-33932 | MS.gene56180:intron | 40.0% | |
| AATGCCAGTTTCATTGCCAT+TGG | + | 8631:34548-34567 | None:intergenic | 40.0% | |
| ACAAAAGGTGGAAAGCAAAC+TGG | - | 8631:35356-35375 | MS.gene56180:intron | 40.0% | |
| ACAACATGAGATGAGCATGT+TGG | - | 8631:35425-35444 | MS.gene56180:intron | 40.0% | |
| ACAATAGGAAGATTGAGTCC+AGG | + | 8631:34749-34768 | None:intergenic | 40.0% | |
| ACAGCCTGCTGCAATATTAA+AGG | + | 8631:39742-39761 | None:intergenic | 40.0% | |
| ACCAAGATTTCAGGATCATC+GGG | + | 8631:33729-33748 | None:intergenic | 40.0% | |
| ACCAGCAATTGCAACCATTT+CGG | - | 8631:33583-33602 | MS.gene56180:CDS | 40.0% | |
| AGAATAGAGTAAGATGGAGC+CGG | - | 8631:37249-37268 | MS.gene56180:intron | 40.0% | |
| AGAGTTACAGAAAGGAACGA+CGG | + | 8631:33526-33545 | None:intergenic | 40.0% | |
| AGTCTTGGTTGGAAAGGAAA+AGG | - | 8631:35630-35649 | MS.gene56180:intron | 40.0% | |
| AGTGAGTTCCCATATGAAGA+GGG | - | 8631:33914-33933 | MS.gene56180:intron | 40.0% | |
| ATATAGGAGCAGCTTAGATC+CGG | - | 8631:37703-37722 | MS.gene56180:intron | 40.0% | |
| ATGCCAGTTTCATTGCCATT+GGG | + | 8631:34547-34566 | None:intergenic | 40.0% | |
| ATGCTGGAAATTGTACCCTT+GGG | - | 8631:38958-38977 | MS.gene56180:intron | 40.0% | |
| ATGGAGGTTACTTGAATGTG+AGG | + | 8631:35789-35808 | None:intergenic | 40.0% | |
| CATAGACACAATTCGAACTC+GGG | - | 8631:37042-37061 | MS.gene56180:intron | 40.0% | |
| CATGAAAAAGGGTTAAGCAG+CGG | + | 8631:38275-38294 | None:intergenic | 40.0% | |
| CATGTGGTGTAAGGAAGATA+AGG | + | 8631:37641-37660 | None:intergenic | 40.0% | |
| CCAAAACGACAAAGGAATAC+AGG | + | 8631:37809-37828 | None:intergenic | 40.0% | |
| CCAAAAGATGTAACAAGCCA+TGG | + | 8631:35542-35561 | None:intergenic | 40.0% | |
| CCAGAAGATCTTCAACAGAA+GGG | + | 8631:38437-38456 | None:intergenic | 40.0% | |
| CTGACATACAGGTATTCACT+AGG | - | 8631:38463-38482 | MS.gene56180:intron | 40.0% | |
| CTGGACAAAATGTTCTCCTA+TGG | - | 8631:34131-34150 | MS.gene56180:intron | 40.0% | |
| GAAGCTTGAGATACAAAAGG+TGG | - | 8631:35344-35363 | MS.gene56180:intron | 40.0% | |
| GACAAGGTCGGGAAATATAT+AGG | - | 8631:37687-37706 | MS.gene56180:intron | 40.0% | |
| GCAATGAAACTGGCATTTGA+TGG | - | 8631:34551-34570 | MS.gene56180:CDS | 40.0% | |
| GCGTCATCAGAAACATGAAA+AGG | + | 8631:36392-36411 | None:intergenic | 40.0% | |
| GGTTTAAGCAACGATGAAGA+TGG | - | 8631:39921-39940 | MS.gene56180:CDS | 40.0% | |
| GTATGGAGTGAATCAACAAG+TGG | + | 8631:38300-38319 | None:intergenic | 40.0% | |
| GTCAAAGACAGGAAGAAAGA+AGG | - | 8631:35853-35872 | MS.gene56180:intron | 40.0% | |
| GTCTTGGTTGGAAAGGAAAA+GGG | - | 8631:35631-35650 | MS.gene56180:intron | 40.0% | |
| GTGAAAATTGTGATAGCCAC+TGG | - | 8631:36084-36103 | MS.gene56180:intron | 40.0% | |
| GTGGATTTAGCTGGAAAAGA+TGG | - | 8631:36318-36337 | MS.gene56180:intron | 40.0% | |
| GTGTAAGGAAGATAAGGCAT+AGG | + | 8631:37635-37654 | None:intergenic | 40.0% | |
| GTTCTCCTATGGTTTAGTGA+GGG | - | 8631:34142-34161 | MS.gene56180:intron | 40.0% | |
| TAATCATCCATTGAGCTGAG+GGG | - | 8631:39282-39301 | MS.gene56180:intron | 40.0% | |
| TAATGTATCCGACACACTCT+GGG | + | 8631:38878-38897 | None:intergenic | 40.0% | |
| TACCATAAACAAGCAATCCC+TGG | + | 8631:37667-37686 | None:intergenic | 40.0% | |
| TACCCTTGGGAACATGTAAA+GGG | - | 8631:38971-38990 | MS.gene56180:intron | 40.0% | |
| TACTGGTCAGATGCAACAAA+AGG | - | 8631:38904-38923 | MS.gene56180:intron | 40.0% | |
| TAGGCCTTTAATATTGCAGC+AGG | - | 8631:39735-39754 | MS.gene56180:CDS | 40.0% | |
| TATTATCGAGCTCACTTGCT+GGG | - | 8631:38030-38049 | MS.gene56180:intron | 40.0% | |
| TCAACATCTGTGAACCAGTA+TGG | - | 8631:35742-35761 | MS.gene56180:CDS | 40.0% | |
| TCAATGTCACAACATGAACC+TGG | - | 8631:34728-34747 | MS.gene56180:intron | 40.0% | |
| TCCAACCAAGACTTTGCAAA+AGG | + | 8631:35623-35642 | None:intergenic | 40.0% | |
| TGAAGAGGCTGAAGTAGAAA+TGG | - | 8631:35581-35600 | MS.gene56180:intron | 40.0% | |
| TGGAGGTTACTTGAATGTGA+GGG | + | 8631:35788-35807 | None:intergenic | 40.0% | |
| TGTACAGCATAACACTGTCT+TGG | + | 8631:35462-35481 | None:intergenic | 40.0% | |
| TGTTCTCCTATGGTTTAGTG+AGG | - | 8631:34141-34160 | MS.gene56180:intron | 40.0% | |
| TGTTTATGGTAGACAAGGTC+GGG | - | 8631:37676-37695 | MS.gene56180:intron | 40.0% | |
| TTACACTTCTGCAAAAGGCA+TGG | - | 8631:35030-35049 | MS.gene56180:intron | 40.0% | |
| TTATTATCGAGCTCACTTGC+TGG | - | 8631:38029-38048 | MS.gene56180:intron | 40.0% | |
| TTCATCAAGCACTTGGCAAT+TGG | + | 8631:34839-34858 | None:intergenic | 40.0% | |
| TTCCAGGGATTGCTTGTTTA+TGG | - | 8631:37662-37681 | MS.gene56180:intron | 40.0% | |
| TTCCCTTTACATGTTCCCAA+GGG | + | 8631:38976-38995 | None:intergenic | 40.0% | |
| TTCTCCTATGGTTTAGTGAG+GGG | - | 8631:34143-34162 | MS.gene56180:intron | 40.0% | |
| TTGCAAAGTCTTGGTTGGAA+AGG | - | 8631:35624-35643 | MS.gene56180:intron | 40.0% | |
| TTGGGAACATGTAAAGGGAA+CGG | - | 8631:38976-38995 | MS.gene56180:intron | 40.0% | |
| TTTGTTGCATCTGACCAGTA+TGG | + | 8631:38904-38923 | None:intergenic | 40.0% | |
| ! | CAGATAATGGCTATTGGTGA+TGG | - | 8631:39807-39826 | MS.gene56180:CDS | 40.0% |
| ! | CTGGCATTTGATGGTTTGAA+AGG | - | 8631:34560-34579 | MS.gene56180:CDS | 40.0% |
| ! | CTTTTTCCATACCAGGAAAG+GGG | - | 8631:38562-38581 | MS.gene56180:intron | 40.0% |
| ! | GAACTCCTTTTGCAAAGTCT+TGG | - | 8631:35615-35634 | MS.gene56180:intron | 40.0% |
| ! | GTCTTTTTCCATACCAGGAA+AGG | - | 8631:38560-38579 | MS.gene56180:intron | 40.0% |
| ! | TCCTTTTGCAAAGTCTTGGT+TGG | - | 8631:35619-35638 | MS.gene56180:intron | 40.0% |
| ! | TGAAAAGCGCAAAAGAGACA+CGG | + | 8631:33560-33579 | None:intergenic | 40.0% |
| ! | TGAAGGTCTTTTTCCATACC+AGG | - | 8631:38555-38574 | MS.gene56180:intron | 40.0% |
| ! | TTAGGCATTGCACTGAGTAA+TGG | - | 8631:39864-39883 | MS.gene56180:CDS | 40.0% |
| ! | TTTTTCCATACCAGGAAAGG+GGG | - | 8631:38563-38582 | MS.gene56180:intron | 40.0% |
| !! | AAAAGTGCTGCTTGATCACT+TGG | - | 8631:39002-39021 | MS.gene56180:intron | 40.0% |
| !! | AAAGTGCTGCTTGATCACTT+GGG | - | 8631:39003-39022 | MS.gene56180:intron | 40.0% |
| !! | AACCAAAGGTGCCTCATTAT+TGG | - | 8631:38331-38350 | MS.gene56180:intron | 40.0% |
| !! | ACCAAAGGTGCCTCATTATT+GGG | - | 8631:38332-38351 | MS.gene56180:intron | 40.0% |
| !! | CCTGTATTCCTTTGTCGTTT+TGG | - | 8631:37806-37825 | MS.gene56180:CDS | 40.0% |
| !! | TACCATCTGAACTGTTTTGG+TGG | + | 8631:35698-35717 | None:intergenic | 40.0% |
| !!! | ACCATCTGAACTGTTTTGGT+GGG | + | 8631:35697-35716 | None:intergenic | 40.0% |
| !!! | CCATGGCTTGTTACATCTTT+TGG | - | 8631:35539-35558 | MS.gene56180:intron | 40.0% |
| !!! | TTCTCCTGGGGTTTTTTTAC+AGG | - | 8631:36356-36375 | MS.gene56180:intron | 40.0% |
| AAAGCTGTGGCAAACGCAAT+TGG | - | 8631:39900-39919 | MS.gene56180:CDS | 45.0% | |
| AACAGACACAGATTGAGCAG+AGG | - | 8631:37207-37226 | MS.gene56180:intron | 45.0% | |
| AACCTCCAGTTCGAAAGGAA+GGG | + | 8631:33942-33961 | None:intergenic | 45.0% | |
| AAGCAATCCCTGGAATCATG+TGG | + | 8631:37657-37676 | None:intergenic | 45.0% | |
| AATTGCGTTTGCCACAGCTT+TGG | + | 8631:39901-39920 | None:intergenic | 45.0% | |
| ACGGAATAGGAATGGGATTG+AGG | + | 8631:33486-33505 | None:intergenic | 45.0% | |
| ATCAGAGAAGACCAAAGCTG+TGG | - | 8631:39887-39906 | MS.gene56180:CDS | 45.0% | |
| ATGACGCCTCTGATTCTACA+AGG | - | 8631:36405-36424 | MS.gene56180:intron | 45.0% | |
| CAAGACAAGCAGAGGAAAGA+GGG | - | 8631:34914-34933 | MS.gene56180:intron | 45.0% | |
| CAGCAATTGCAACCATTTCG+GGG | - | 8631:33585-33604 | MS.gene56180:CDS | 45.0% | |
| CATGCTGGAAATTGTACCCT+TGG | - | 8631:38957-38976 | MS.gene56180:intron | 45.0% | |
| CCAGCAATTGCAACCATTTC+GGG | - | 8631:33584-33603 | MS.gene56180:CDS | 45.0% | |
| CCCTTCTGTTGAAGATCTTC+TGG | - | 8631:38434-38453 | MS.gene56180:intron | 45.0% | |
| CCTTACACCACATGATTCCA+GGG | - | 8631:37647-37666 | MS.gene56180:intron | 45.0% | |
| CGGAATAGGAATGGGATTGA+GGG | + | 8631:33485-33504 | None:intergenic | 45.0% | |
| CGGATACATTACGTCCATAC+TGG | - | 8631:38887-38906 | MS.gene56180:CDS | 45.0% | |
| CTGCTATAGATGATGTTGGC+AGG | - | 8631:34606-34625 | MS.gene56180:intron | 45.0% | |
| CTTGGGAGTTACTGCTAATG+AGG | - | 8631:39020-39039 | MS.gene56180:intron | 45.0% | |
| GAATGCGACGGAATAGGAAT+GGG | + | 8631:33493-33512 | None:intergenic | 45.0% | |
| GCAAGTAACCGGATCAAAAC+AGG | + | 8631:34186-34205 | None:intergenic | 45.0% | |
| GCAGGCATGTCTTTACTCTT+TGG | - | 8631:38215-38234 | MS.gene56180:intron | 45.0% | |
| GCCAGAAGATCTTCAACAGA+AGG | + | 8631:38438-38457 | None:intergenic | 45.0% | |
| GCTATGAATGAAGGATGCCA+CGG | - | 8631:37143-37162 | MS.gene56180:intron | 45.0% | |
| GCTTCGTCTAAATGTCCCAA+TGG | - | 8631:34529-34548 | MS.gene56180:CDS | 45.0% | |
| GGTACAATTTCCAGCATGTC+TGG | + | 8631:38955-38974 | None:intergenic | 45.0% | |
| GTAATGTATCCGACACACTC+TGG | + | 8631:38879-38898 | None:intergenic | 45.0% | |
| GTACCCTTGGGAACATGTAA+AGG | - | 8631:38970-38989 | MS.gene56180:intron | 45.0% | |
| GTCTTAACCTCCAGTTCGAA+AGG | + | 8631:33947-33966 | None:intergenic | 45.0% | |
| GTTCCCTTTACATGTTCCCA+AGG | + | 8631:38977-38996 | None:intergenic | 45.0% | |
| GTTGTTGAATGCGACGGAAT+AGG | + | 8631:33499-33518 | None:intergenic | 45.0% | |
| TAACCTCCAGTTCGAAAGGA+AGG | + | 8631:33943-33962 | None:intergenic | 45.0% | |
| TCCCACCAAAACAGTTCAGA+TGG | - | 8631:35693-35712 | MS.gene56180:intron | 45.0% | |
| TCCTTACACCACATGATTCC+AGG | - | 8631:37646-37665 | MS.gene56180:intron | 45.0% | |
| TCTCCTATGGTTTAGTGAGG+GGG | - | 8631:34144-34163 | MS.gene56180:intron | 45.0% | |
| TGAATGCGACGGAATAGGAA+TGG | + | 8631:33494-33513 | None:intergenic | 45.0% | |
| TGATGAGATCCGTATCCTCA+TGG | - | 8631:34948-34967 | MS.gene56180:intron | 45.0% | |
| TGATGTAGAGATGCTTGAGC+TGG | - | 8631:39836-39855 | MS.gene56180:CDS | 45.0% | |
| TGCATATCGATAGATGGCGT+CGG | + | 8631:39952-39971 | None:intergenic | 45.0% | |
| TGGTACAGCTTGAACAACAG+TGG | + | 8631:38935-38954 | None:intergenic | 45.0% | |
| TGTCCCAATGGCAATGAAAC+TGG | - | 8631:34541-34560 | MS.gene56180:CDS | 45.0% | |
| ! | ATGCTTGAGCTGGCTTCTTT+AGG | - | 8631:39846-39865 | MS.gene56180:CDS | 45.0% |
| ! | ATTGAGCAGAGGCATGAGTT+GGG | - | 8631:37218-37237 | MS.gene56180:intron | 45.0% |
| ! | CACAAAAGGCTTTCGAGTAG+AGG | + | 8631:37289-37308 | None:intergenic | 45.0% |
| ! | CTACTCGAAAGCCTTTTGTG+AGG | - | 8631:37289-37308 | MS.gene56180:intron | 45.0% |
| ! | GAGGAGGAAAGAGAGAGTAT+CGG | - | 8631:33625-33644 | MS.gene56180:intron | 45.0% |
| ! | GTGTGTCAGGGATTTGGTTT+AGG | + | 8631:37926-37945 | None:intergenic | 45.0% |
| ! | TCCCAATAATGAGGCACCTT+TGG | + | 8631:38336-38355 | None:intergenic | 45.0% |
| ! | TTGCAGTTGTCTTTGAGGAC+AGG | + | 8631:38752-38771 | None:intergenic | 45.0% |
| ! | TTTTTGTCCCCTCAGCTCAA+TGG | + | 8631:39292-39311 | None:intergenic | 45.0% |
| !! | AGCAATTCCAGATAGTGGGT+AGG | - | 8631:36868-36887 | MS.gene56180:intron | 45.0% |
| !! | GCAATTCCAGATAGTGGGTA+GGG | - | 8631:36869-36888 | MS.gene56180:intron | 45.0% |
| !!! | ATTTTTTTAGAAATAATATT+TGG | - | 8631:36836-36855 | MS.gene56180:intron | 5.0% |
| AACGCCGAAGAGGAACAAGA+AGG | - | 8631:33662-33681 | MS.gene56180:intron | 50.0% | |
| ACATGTCATTCCCCCTTTCC+TGG | + | 8631:38576-38595 | None:intergenic | 50.0% | |
| ACCTCCAGTTCGAAAGGAAG+GGG | + | 8631:33941-33960 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGTGAGAGAG+AGG | + | 8631:36742-36761 | None:intergenic | 50.0% | |
| AGAGGAAAGAGATGTGCCTC+CGG | + | 8631:37271-37290 | None:intergenic | 50.0% | |
| AGTCCCCCTCACTAAACCAT+AGG | + | 8631:34150-34169 | None:intergenic | 50.0% | |
| ATAGAGTAAGATGGAGCCGG+AGG | - | 8631:37252-37271 | MS.gene56180:intron | 50.0% | |
| ATGGTTTAGTGAGGGGGACT+CGG | - | 8631:34150-34169 | MS.gene56180:intron | 50.0% | |
| ATTACCTCTCGACAGACGTC+CGG | + | 8631:37725-37744 | None:intergenic | 50.0% | |
| CCCGAAATGGTTGCAATTGC+TGG | + | 8631:33587-33606 | None:intergenic | 50.0% | |
| CCCTGGAATCATGTGGTGTA+AGG | + | 8631:37650-37669 | None:intergenic | 50.0% | |
| GAAGGGGTCCCTCTTCATAT+GGG | + | 8631:33925-33944 | None:intergenic | 50.0% | |
| GAGATCCGTATCCTCATGGT+TGG | - | 8631:34952-34971 | MS.gene56180:intron | 50.0% | |
| GAGCTGCCTTGTAGAATCAG+AGG | + | 8631:36414-36433 | None:intergenic | 50.0% | |
| GCAAGACAAGCAGAGGAAAG+AGG | - | 8631:34913-34932 | MS.gene56180:intron | 50.0% | |
| GCCCGATGATCCTGAAATCT+TGG | - | 8631:33725-33744 | MS.gene56180:intron | 50.0% | |
| GCTGCAGAGAACATGTAGGA+TGG | - | 8631:37165-37184 | MS.gene56180:intron | 50.0% | |
| GGAGGACGAGAGTTACAGAA+AGG | + | 8631:33534-33553 | None:intergenic | 50.0% | |
| GTTACAGAAAGGAACGACGG+CGG | + | 8631:33523-33542 | None:intergenic | 50.0% | |
| TCAAGCTGTACCAGACATGC+TGG | - | 8631:38942-38961 | MS.gene56180:intron | 50.0% | |
| TCATTCCCCCTTTCCTGGTA+TGG | + | 8631:38571-38590 | None:intergenic | 50.0% | |
| TCTGGCATCTGCTGACATAC+AGG | - | 8631:38452-38471 | MS.gene56180:intron | 50.0% | |
| TCTTGTTCCTCTTCGGCGTT+CGG | + | 8631:33662-33681 | None:intergenic | 50.0% | |
| TTTGAGAGAGGCCTCAGCAA+GGG | - | 8631:36059-36078 | MS.gene56180:intron | 50.0% | |
| ! | AATGAGGCACCTTTGGTTCG+TGG | + | 8631:38329-38348 | None:intergenic | 50.0% |
| ! | AATTTTCACGCCCCTTGCTG+AGG | + | 8631:36073-36092 | None:intergenic | 50.0% |
| ! | AGCTCACTTGCTGGGATCTA+TGG | - | 8631:38038-38057 | MS.gene56180:intron | 50.0% |
| ! | ATGGCTATTGAGGGTGTGTC+AGG | + | 8631:37939-37958 | None:intergenic | 50.0% |
| ! | GATTGAGCAGAGGCATGAGT+TGG | - | 8631:37217-37236 | MS.gene56180:intron | 50.0% |
| ! | GGGAACAATGCTTTGAGCAG+TGG | - | 8631:37353-37372 | MS.gene56180:CDS | 50.0% |
| ! | TCGAAAGCCTTTTGTGAGGC+AGG | - | 8631:37293-37312 | MS.gene56180:intron | 50.0% |
| ! | TGGCTATTGAGGGTGTGTCA+GGG | + | 8631:37938-37957 | None:intergenic | 50.0% |
| ! | TTGAGGGTGTGTCAGGGATT+TGG | + | 8631:37932-37951 | None:intergenic | 50.0% |
| !! | AACTGCCAAGGCTTTGAGAG+AGG | - | 8631:36047-36066 | MS.gene56180:intron | 50.0% |
| ACCCCTTCCTTTCGAACTGG+AGG | - | 8631:33937-33956 | MS.gene56180:intron | 55.0% | |
| AGACACTGCCCAGAGTGTGT+CGG | - | 8631:38867-38886 | MS.gene56180:CDS | 55.0% | |
| CACGGCTGCAGAGAACATGT+AGG | - | 8631:37161-37180 | MS.gene56180:intron | 55.0% | |
| CCATCTCCCTACCCACTATC+TGG | + | 8631:36878-36897 | None:intergenic | 55.0% | |
| CTACATGTTCTCTGCAGCCG+TGG | + | 8631:37163-37182 | None:intergenic | 55.0% | |
| CTCTCTCTTTCCTCCTCCGT+CGG | + | 8631:33622-33641 | None:intergenic | 55.0% | |
| GACAGCAGCAAGACAAGCAG+AGG | - | 8631:34906-34925 | MS.gene56180:intron | 55.0% | |
| GCTGCACGTATTCCCCGAAA+TGG | + | 8631:33600-33619 | None:intergenic | 55.0% | |
| GGAAGGGGTCCCTCTTCATA+TGG | + | 8631:33926-33945 | None:intergenic | 55.0% | |
| TGAGGCCTCTCTCAAAGCCT+TGG | + | 8631:36055-36074 | None:intergenic | 55.0% | |
| TGGTTTAGTGAGGGGGACTC+GGG | - | 8631:34151-34170 | MS.gene56180:intron | 55.0% | |
| TTGAGAGAGGCCTCAGCAAG+GGG | - | 8631:36060-36079 | MS.gene56180:intron | 55.0% | |
| ! | CTTTGAGAGAGGCCTCAGCA+AGG | - | 8631:36058-36077 | MS.gene56180:intron | 55.0% |
| ! | TTGAGGGAGAGAGCACGTGA+TGG | + | 8631:33469-33488 | None:intergenic | 55.0% |
| !! | CCAGATAGTGGGTAGGGAGA+TGG | - | 8631:36875-36894 | MS.gene56180:intron | 55.0% |
| AGATCCGGACGTCTGTCGAG+AGG | - | 8631:37718-37737 | MS.gene56180:intron | 60.0% | |
| AGCGCAAAAGAGACACGGCG+AGG | + | 8631:33555-33574 | None:intergenic | 60.0% | |
| GAGGCAGGTGTGCCCTTGTT+TGG | - | 8631:37308-37327 | MS.gene56180:intron | 60.0% | |
| GCAAAAGAGACACGGCGAGG+AGG | + | 8631:33552-33571 | None:intergenic | 60.0% | |
| GGCGGCGTTGTTGAATGCGA+CGG | + | 8631:33505-33524 | None:intergenic | 60.0% | |
| GGGACCCCTTCCTTTCGAAC+TGG | - | 8631:33934-33953 | MS.gene56180:intron | 60.0% | |
| GGGCACACCTGCCTCACAAA+AGG | + | 8631:37303-37322 | None:intergenic | 60.0% | |
| TCAGAAGCCGAACGCCGAAG+AGG | - | 8631:33652-33671 | MS.gene56180:intron | 60.0% | |
| ! | CAGGTGTGCCCTTGTTTGGC+AGG | - | 8631:37312-37331 | MS.gene56180:intron | 60.0% |
| ATACGTGCAGCCGACGGAGG+AGG | - | 8631:33609-33628 | MS.gene56180:intron | 65.0% | |
| CGGGGAATACGTGCAGCCGA+CGG | - | 8631:33603-33622 | MS.gene56180:CDS | 65.0% | |
| GGAATACGTGCAGCCGACGG+AGG | - | 8631:33606-33625 | MS.gene56180:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8631 | gene | 33456 | 39977 | 33456 | ID=MS.gene56180 |
| 8631 | mRNA | 33456 | 39977 | 33456 | ID=MS.gene56180.t1;Parent=MS.gene56180 |
| 8631 | exon | 39687 | 39977 | 39687 | ID=MS.gene56180.t1.exon1;Parent=MS.gene56180.t1 |
| 8631 | CDS | 39687 | 39977 | 39687 | ID=cds.MS.gene56180.t1;Parent=MS.gene56180.t1 |
| 8631 | exon | 38667 | 38918 | 38667 | ID=MS.gene56180.t1.exon2;Parent=MS.gene56180.t1 |
| 8631 | CDS | 38667 | 38918 | 38667 | ID=cds.MS.gene56180.t1;Parent=MS.gene56180.t1 |
| 8631 | exon | 38464 | 38559 | 38464 | ID=MS.gene56180.t1.exon3;Parent=MS.gene56180.t1 |
| 8631 | CDS | 38464 | 38559 | 38464 | ID=cds.MS.gene56180.t1;Parent=MS.gene56180.t1 |
| 8631 | exon | 37719 | 37896 | 37719 | ID=MS.gene56180.t1.exon4;Parent=MS.gene56180.t1 |
| 8631 | CDS | 37719 | 37896 | 37719 | ID=cds.MS.gene56180.t1;Parent=MS.gene56180.t1 |
| 8631 | exon | 37505 | 37573 | 37505 | ID=MS.gene56180.t1.exon5;Parent=MS.gene56180.t1 |
| 8631 | CDS | 37505 | 37573 | 37505 | ID=cds.MS.gene56180.t1;Parent=MS.gene56180.t1 |
| 8631 | exon | 37323 | 37423 | 37323 | ID=MS.gene56180.t1.exon6;Parent=MS.gene56180.t1 |
| 8631 | CDS | 37323 | 37423 | 37323 | ID=cds.MS.gene56180.t1;Parent=MS.gene56180.t1 |
| 8631 | exon | 37056 | 37148 | 37056 | ID=MS.gene56180.t1.exon7;Parent=MS.gene56180.t1 |
| 8631 | CDS | 37056 | 37148 | 37056 | ID=cds.MS.gene56180.t1;Parent=MS.gene56180.t1 |
| 8631 | exon | 35694 | 35765 | 35694 | ID=MS.gene56180.t1.exon8;Parent=MS.gene56180.t1 |
| 8631 | CDS | 35694 | 35765 | 35694 | ID=cds.MS.gene56180.t1;Parent=MS.gene56180.t1 |
| 8631 | exon | 35095 | 35214 | 35095 | ID=MS.gene56180.t1.exon9;Parent=MS.gene56180.t1 |
| 8631 | CDS | 35095 | 35214 | 35095 | ID=cds.MS.gene56180.t1;Parent=MS.gene56180.t1 |
| 8631 | exon | 34960 | 35010 | 34960 | ID=MS.gene56180.t1.exon10;Parent=MS.gene56180.t1 |
| 8631 | CDS | 34960 | 35010 | 34960 | ID=cds.MS.gene56180.t1;Parent=MS.gene56180.t1 |
| 8631 | exon | 34392 | 34580 | 34392 | ID=MS.gene56180.t1.exon11;Parent=MS.gene56180.t1 |
| 8631 | CDS | 34392 | 34580 | 34392 | ID=cds.MS.gene56180.t1;Parent=MS.gene56180.t1 |
| 8631 | exon | 33456 | 33623 | 33456 | ID=MS.gene56180.t1.exon12;Parent=MS.gene56180.t1 |
| 8631 | CDS | 33456 | 33623 | 33456 | ID=cds.MS.gene56180.t1;Parent=MS.gene56180.t1 |
| Gene Sequence |
| Protein sequence |
