Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56265.t1 | XP_013458835.1 | 97.4 | 804 | 21 | 0 | 1 | 804 | 1 | 804 | 0.00E+00 | 1592.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56265.t1 | Q9SJ20 | 81.5 | 816 | 139 | 2 | 1 | 804 | 1 | 816 | 0.0e+00 | 1387.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56265.t1 | A0A072UTF3 | 97.4 | 804 | 21 | 0 | 1 | 804 | 1 | 804 | 0.0e+00 | 1592.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene77617 | MS.gene56265 | PPI |
| MS.gene020558 | MS.gene56265 | PPI |
| MS.gene56265 | MS.gene92155 | PPI |
| MS.gene56265 | MS.gene073967 | PPI |
| MS.gene039012 | MS.gene56265 | PPI |
| MS.gene007306 | MS.gene56265 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56265.t1 | MTR_3g009480 | 97.388 | 804 | 21 | 0 | 1 | 804 | 1 | 804 | 0.0 | 1649 |
| MS.gene56265.t1 | MTR_8g092510 | 94.601 | 815 | 30 | 2 | 1 | 804 | 1 | 812 | 0.0 | 1617 |
| MS.gene56265.t1 | MTR_8g092500 | 84.483 | 58 | 9 | 0 | 42 | 99 | 12 | 69 | 2.74e-26 | 105 |
| MS.gene56265.t1 | MTR_8g092500 | 76.786 | 56 | 13 | 0 | 203 | 258 | 69 | 124 | 2.37e-20 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56265.t1 | AT2G21790 | 81.495 | 816 | 139 | 2 | 1 | 804 | 1 | 816 | 0.0 | 1436 |
Find 191 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGATATATTTGACTTCT+TGG | 0.169061 | 3.1:-4904980 | MS.gene56265:CDS |
| TTGGGTGCCTGATCTCTTTA+TGG | 0.175397 | 3.1:-4904899 | MS.gene56265:CDS |
| TCAACAGATAAGACCTTTCT+AGG | 0.221939 | 3.1:+4905445 | None:intergenic |
| GACCTTTCTGCAGTTTCAAC+TGG | 0.230257 | 3.1:+4904379 | None:intergenic |
| TCAGTTGAGTAGTTGCTTCT+TGG | 0.230831 | 3.1:-4905256 | MS.gene56265:CDS |
| GCAAAAGATATTGGTTAATA+TGG | 0.246409 | 3.1:-4903777 | MS.gene56265:CDS |
| GAAAATTACGGATGCATAAT+CGG | 0.257386 | 3.1:+4905897 | None:intergenic |
| GTGGGATTGGGGTGCACTTC+GGG | 0.263837 | 3.1:-4904104 | MS.gene56265:CDS |
| TGAAGAATTCCCTTGCTTAC+AGG | 0.276160 | 3.1:+4904160 | None:intergenic |
| ACCTGGTTTGGCAGATTGTT+GGG | 0.280285 | 3.1:-4904827 | MS.gene56265:CDS |
| ACCCATTGGTATTGGAGTTC+AGG | 0.293692 | 3.1:-4904341 | MS.gene56265:CDS |
| TCCCTCCAATTTGTGGGATT+GGG | 0.296736 | 3.1:-4904116 | MS.gene56265:CDS |
| CTCCCTCCAATTTGTGGGAT+TGG | 0.303419 | 3.1:-4904117 | MS.gene56265:CDS |
| TCTTCACGATTTGACTGAAA+TGG | 0.304516 | 3.1:-4903915 | MS.gene56265:CDS |
| GGAGATCAAGCAAAAGATAT+TGG | 0.315716 | 3.1:-4903786 | MS.gene56265:CDS |
| TCTCTGTTGGACTTGTATAC+TGG | 0.324501 | 3.1:+4904596 | None:intergenic |
| GAAAAGCAACCAGCAGAATC+TGG | 0.327390 | 3.1:-4904656 | MS.gene56265:CDS |
| GTGCTTCATTGGGGCAGAAC+AGG | 0.346214 | 3.1:+4904848 | None:intergenic |
| CGGCACAGACCCATTGGTAT+TGG | 0.349426 | 3.1:-4904349 | MS.gene56265:CDS |
| TGCACCCCAATCCCACAAAT+TGG | 0.350482 | 3.1:+4904111 | None:intergenic |
| CACCTGGTTTGGCAGATTGT+TGG | 0.366008 | 3.1:-4904828 | MS.gene56265:CDS |
| GCCAAACCAGGTGCTTCATT+GGG | 0.366941 | 3.1:+4904838 | None:intergenic |
| TTGAAGTCACAGATAGAAAC+TGG | 0.367181 | 3.1:-4904715 | MS.gene56265:CDS |
| CTTCACGATTTGACTGAAAT+GGG | 0.371085 | 3.1:-4903914 | MS.gene56265:CDS |
| GTTTGCGCCGGCGTTTATAA+AGG | 0.372735 | 3.1:-4905985 | MS.gene56265:CDS |
| TTGTTTAACTGTTGAGCCTC+TGG | 0.375695 | 3.1:+4904274 | None:intergenic |
| ACTACCGCTATAAGTTTCAT+AGG | 0.377693 | 3.1:+4904183 | None:intergenic |
| TGCCAAACCAGGTGCTTCAT+TGG | 0.378584 | 3.1:+4904837 | None:intergenic |
| GCATCTACCAGTCAAATTCT+TGG | 0.379695 | 3.1:-4904025 | MS.gene56265:CDS |
| TTGTAGATATTAGAAGTATA+TGG | 0.388878 | 3.1:+4903983 | None:intergenic |
| TCATCTGCCTCCTTCACCTT+AGG | 0.393440 | 3.1:+4903557 | None:intergenic |
| CCCCAATGAAGCACCTGGTT+TGG | 0.394351 | 3.1:-4904839 | MS.gene56265:CDS |
| AAGTCATATACAAAACTGTT+TGG | 0.399108 | 3.1:-4903808 | MS.gene56265:CDS |
| CACCTTAGGTTGATCTTCAA+TGG | 0.404458 | 3.1:+4903571 | None:intergenic |
| TGGTCAAAGGGTTTGAAGAC+TGG | 0.404567 | 3.1:-4903656 | MS.gene56265:CDS |
| CATGAAGAATGCGGCTCGAT+TGG | 0.412162 | 3.1:-4905523 | MS.gene56265:CDS |
| TACTGCACGTTATGTTGATC+AGG | 0.416179 | 3.1:-4905052 | MS.gene56265:CDS |
| CCCATTGGTATTGGAGTTCA+GGG | 0.416868 | 3.1:-4904340 | MS.gene56265:CDS |
| CAACTGAGGTCTAGGTGTTC+CGG | 0.419416 | 3.1:+4905272 | None:intergenic |
| AAAATTACGGATGCATAATC+GGG | 0.422737 | 3.1:+4905898 | None:intergenic |
| ACTTTCTGAGCGACTAAAAC+AGG | 0.423118 | 3.1:+4906006 | None:intergenic |
| AGTCATATACAAAACTGTTT+GGG | 0.426393 | 3.1:-4903807 | MS.gene56265:CDS |
| CTTCTTAACAGTTTCAGAAA+AGG | 0.427555 | 3.1:+4905584 | None:intergenic |
| TGTGACTCCCTCCAATTTGT+GGG | 0.428684 | 3.1:-4904122 | MS.gene56265:CDS |
| TCTTATCTGTTGAAAGTTGA+AGG | 0.434852 | 3.1:-4905435 | MS.gene56265:CDS |
| CTCATCAGTCTAAGCTTGTT+GGG | 0.451276 | 3.1:-4904504 | MS.gene56265:CDS |
| CCCTCCAATTTGTGGGATTG+GGG | 0.452935 | 3.1:-4904115 | MS.gene56265:CDS |
| TCTCATCAGTCTAAGCTTGT+TGG | 0.453961 | 3.1:-4904505 | MS.gene56265:CDS |
| CTTCTTGGTTTGCATGAAAG+AGG | 0.454593 | 3.1:-4905241 | MS.gene56265:CDS |
| AGTAAATCTGCTGGAGGGAT+TGG | 0.455606 | 3.1:-4905171 | MS.gene56265:CDS |
| GGAACAAACGGAACATCTAA+TGG | 0.457199 | 3.1:-4905105 | MS.gene56265:CDS |
| TTGGAATTGAAAATAAATCA+TGG | 0.459190 | 3.1:-4904961 | MS.gene56265:CDS |
| TGGTAGATGCAGTTGGCATA+GGG | 0.460342 | 3.1:+4904038 | None:intergenic |
| TGCCCGTGGTAGTTACATTC+GGG | 0.461603 | 3.1:-4905127 | MS.gene56265:CDS |
| ACTGTGGAATCCTGCACTTA+AGG | 0.461877 | 3.1:-4903891 | MS.gene56265:CDS |
| GTGTGACTCCCTCCAATTTG+TGG | 0.463050 | 3.1:-4904123 | MS.gene56265:CDS |
| GGGGATTTATGATACATTGA+AGG | 0.466284 | 3.1:-4905208 | MS.gene56265:CDS |
| CATGAAAGAGGATAGTATTG+AGG | 0.467618 | 3.1:-4905229 | MS.gene56265:CDS |
| CATCACTTGCAGCTCGTGTT+CGG | 0.469357 | 3.1:+4903621 | None:intergenic |
| TTGGATTCAAAACCCTAGAA+AGG | 0.474503 | 3.1:-4905458 | MS.gene56265:CDS |
| TGTGGGATTGGGGTGCACTT+CGG | 0.478406 | 3.1:-4904105 | MS.gene56265:CDS |
| CTGGTAGATGCAGTTGGCAT+AGG | 0.486502 | 3.1:+4904037 | None:intergenic |
| TGTGAATTAGCTGCAAAAGA+AGG | 0.487389 | 3.1:-4904208 | MS.gene56265:CDS |
| GTGCCCGTGGTAGTTACATT+CGG | 0.488383 | 3.1:-4905128 | MS.gene56265:CDS |
| GACCTCAACATATGATAATG+AGG | 0.490912 | 3.1:-4905398 | MS.gene56265:CDS |
| GGTATCAACAGTGAACTTGA+TGG | 0.492813 | 3.1:+4903598 | None:intergenic |
| GCACACCATCTGTGCCATCT+TGG | 0.493955 | 3.1:+4903511 | None:intergenic |
| GAGCTCGGAGCGATGGGGAA+TGG | 0.495090 | 3.1:-4904873 | MS.gene56265:CDS |
| GGTCAAAGGGTTTGAAGACT+GGG | 0.500162 | 3.1:-4903655 | MS.gene56265:CDS |
| TTGCTGTGTACTTGGAGCCA+TGG | 0.501413 | 3.1:-4905005 | MS.gene56265:CDS |
| CAACTACTCAACTGAGGTCT+AGG | 0.502455 | 3.1:+4905264 | None:intergenic |
| TGGAAAGAGCTCGGAGCGAT+GGG | 0.504046 | 3.1:-4904879 | MS.gene56265:CDS |
| TGTTGATTCAGTTGGCTGGT+AGG | 0.505376 | 3.1:-4905644 | MS.gene56265:intron |
| CTACCGCTATAAGTTTCATA+GGG | 0.506721 | 3.1:+4904184 | None:intergenic |
| CCCTGAACTCCAATACCAAT+GGG | 0.507374 | 3.1:+4904340 | None:intergenic |
| TAATTGTGCCCAGATTCTGC+TGG | 0.508224 | 3.1:+4904647 | None:intergenic |
| GGTTCGTTTCGACAAGATAA+CGG | 0.508783 | 3.1:-4906076 | MS.gene56265:CDS |
| ATGGAAAGAGCTCGGAGCGA+TGG | 0.509824 | 3.1:-4904880 | MS.gene56265:CDS |
| GGAGTCACACCCCACATGTC+AGG | 0.510046 | 3.1:+4904136 | None:intergenic |
| TGCATAATCGGGGTGGTTAG+CGG | 0.511312 | 3.1:+4905909 | None:intergenic |
| TTCTGCCCCAATGAAGCACC+TGG | 0.511533 | 3.1:-4904844 | MS.gene56265:CDS |
| ATGATAATGAGGGTTTCTGT+TGG | 0.513641 | 3.1:-4905387 | MS.gene56265:CDS |
| ATGAAAGAGGATAGTATTGA+GGG | 0.520773 | 3.1:-4905228 | MS.gene56265:CDS |
| GCTCTTTCCATAAAGAGATC+AGG | 0.521910 | 3.1:+4904892 | None:intergenic |
| AGTTACATTCGGGGAACAAA+CGG | 0.524482 | 3.1:-4905117 | MS.gene56265:CDS |
| GTTATTGCCAAGAATTTGAC+TGG | 0.525519 | 3.1:+4904018 | None:intergenic |
| ATAATCTTATCCTTAAGTGC+AGG | 0.526709 | 3.1:+4903881 | None:intergenic |
| CATGCCGGCGGCGGTTTCAG+CGG | 0.529513 | 3.1:+4905933 | None:intergenic |
| ACCTTTCTGCAGTTTCAACT+GGG | 0.529840 | 3.1:+4904380 | None:intergenic |
| CCTGGTTTGGCAGATTGTTG+GGG | 0.532035 | 3.1:-4904826 | MS.gene56265:CDS |
| GTTAGCGGTCATGCCGGCGG+CGG | 0.536157 | 3.1:+4905924 | None:intergenic |
| AAAAGCAACCAGCAGAATCT+GGG | 0.538023 | 3.1:-4904655 | MS.gene56265:CDS |
| TGCCATTCCTAGTAGTATGA+AGG | 0.541047 | 3.1:+4904306 | None:intergenic |
| TCATTGAACACACGAAGCAT+TGG | 0.544001 | 3.1:+4905075 | None:intergenic |
| TCTAAGCTTGTTGGGAGCAG+AGG | 0.544709 | 3.1:-4904496 | MS.gene56265:CDS |
| GCTGATACCTTCATACTACT+AGG | 0.545879 | 3.1:-4904313 | MS.gene56265:CDS |
| TCCCCGAATGTAACTACCAC+GGG | 0.547310 | 3.1:+4905125 | None:intergenic |
| AACTTGCGGCACAGACCCAT+TGG | 0.547601 | 3.1:-4904355 | MS.gene56265:CDS |
| AGGTTGATCTTCAATGGCAG+AGG | 0.549832 | 3.1:+4903577 | None:intergenic |
| AGGTTGAAGAAACTCAGTTA+CGG | 0.550367 | 3.1:-4906051 | MS.gene56265:CDS |
| CAACAGATAAGACCTTTCTA+GGG | 0.552426 | 3.1:+4905446 | None:intergenic |
| TTACACACAGCAGTCTCTGT+TGG | 0.552651 | 3.1:+4904583 | None:intergenic |
| GCTGTCATTAGTAAATCTGC+TGG | 0.558625 | 3.1:-4905180 | MS.gene56265:CDS |
| TTCTGAAACTGTTAAGAAGG+CGG | 0.559005 | 3.1:-4905580 | MS.gene56265:CDS |
| CCCCAACAATCTGCCAAACC+AGG | 0.559209 | 3.1:+4904826 | None:intergenic |
| ATCATTACATGTCTCAGAGA+TGG | 0.562165 | 3.1:-4905326 | MS.gene56265:CDS |
| ATTTGACTGGTAGATGCAGT+TGG | 0.562931 | 3.1:+4904031 | None:intergenic |
| AAAGAGATCAGGCACCCAAA+GGG | 0.564159 | 3.1:+4904903 | None:intergenic |
| TGCTTCATTGGGGCAGAACA+GGG | 0.566323 | 3.1:+4904849 | None:intergenic |
| GATAAGATTATCTATGACAA+TGG | 0.569436 | 3.1:-4903869 | MS.gene56265:CDS |
| TAGTGAGATAATCTACGATA+GGG | 0.569945 | 3.1:-4905499 | MS.gene56265:CDS |
| TAGCGGTAGTCCTGTAAGCA+AGG | 0.570043 | 3.1:-4904170 | MS.gene56265:CDS |
| GGTGTGGTTTCAACTTCCAC+AGG | 0.570169 | 3.1:+4903460 | None:intergenic |
| TGCCATTGAAGATCAACCTA+AGG | 0.570975 | 3.1:-4903573 | MS.gene56265:CDS |
| GGGGTGGTTAGCGGTCATGC+CGG | 0.571238 | 3.1:+4905918 | None:intergenic |
| TGATATCAAAGACGGGTGTA+CGG | 0.571641 | 3.1:-4904078 | MS.gene56265:CDS |
| TTGTTCAAGCACAGAGTCTG+TGG | 0.573288 | 3.1:-4904747 | MS.gene56265:CDS |
| AATTCTTCAGCCTGACATGT+GGG | 0.573350 | 3.1:-4904146 | MS.gene56265:CDS |
| GGCAGATGATGCTGAGAATG+AGG | 0.575733 | 3.1:-4903543 | MS.gene56265:CDS |
| ATTGAAAATAAATCATGGAA+AGG | 0.576131 | 3.1:-4904956 | MS.gene56265:CDS |
| ATCTCTTTATGGAAAGAGCT+CGG | 0.576641 | 3.1:-4904888 | MS.gene56265:CDS |
| ACCCCAATCCCACAAATTGG+AGG | 0.580755 | 3.1:+4904114 | None:intergenic |
| ACCCTGAACTCCAATACCAA+TGG | 0.583702 | 3.1:+4904339 | None:intergenic |
| CACTTGCAGCTCGTGTTCGG+AGG | 0.584028 | 3.1:+4903624 | None:intergenic |
| ATAGTGAGATAATCTACGAT+AGG | 0.585463 | 3.1:-4905500 | MS.gene56265:CDS |
| AAGAGATAAGGGTTTGCCTG+TGG | 0.590111 | 3.1:-4904530 | MS.gene56265:CDS |
| ACTGCACGTTATGTTGATCA+GGG | 0.592882 | 3.1:-4905051 | MS.gene56265:CDS |
| TCGGGAGATGATATCAAAGA+CGG | 0.597011 | 3.1:-4904086 | MS.gene56265:CDS |
| GTGGTTAGCGGTCATGCCGG+CGG | 0.600952 | 3.1:+4905921 | None:intergenic |
| GTCGCTCAGAAAGTTTGCGC+CGG | 0.602841 | 3.1:-4905997 | MS.gene56265:CDS |
| CCCCAATCCCACAAATTGGA+GGG | 0.603150 | 3.1:+4904115 | None:intergenic |
| AGAGATGAGTGTACGTCCTG+TGG | 0.603838 | 3.1:-4903476 | MS.gene56265:CDS |
| CCCTTATCTCTTACAAAACG+CGG | 0.604009 | 3.1:+4904541 | None:intergenic |
| ACCCTCATTATCATATGTTG+AGG | 0.604412 | 3.1:+4905396 | None:intergenic |
| CGGGAGATGATATCAAAGAC+GGG | 0.605097 | 3.1:-4904085 | MS.gene56265:CDS |
| TACCTTCATACTACTAGGAA+TGG | 0.607015 | 3.1:-4904308 | MS.gene56265:CDS |
| TGAAATTATCATGAAGAATG+CGG | 0.608901 | 3.1:-4905532 | MS.gene56265:CDS |
| TGACCAAGCATGAAAATGCA+AGG | 0.609918 | 3.1:+4903673 | None:intergenic |
| TAAAGAGATCAGGCACCCAA+AGG | 0.610062 | 3.1:+4904902 | None:intergenic |
| TGCACGTTATGTTGATCAGG+GGG | 0.610861 | 3.1:-4905049 | MS.gene56265:CDS |
| GAAGAGAGACGGTCGTCAAG+AGG | 0.611484 | 3.1:-4906100 | MS.gene56265:CDS |
| GAAAGTTGAAGGAGTGGTTG+TGG | 0.611890 | 3.1:-4905424 | MS.gene56265:CDS |
| GGAGCAGAGGCTCTAGTAGT+CGG | 0.613742 | 3.1:-4904483 | MS.gene56265:CDS |
| TTAGCCGCTGAAACCGCCGC+CGG | 0.616264 | 3.1:-4905937 | MS.gene56265:CDS |
| ACCCAGTTGAAACTGCAGAA+AGG | 0.616552 | 3.1:-4904381 | MS.gene56265:CDS |
| GTCATTAGTAAATCTGCTGG+AGG | 0.617415 | 3.1:-4905177 | MS.gene56265:CDS |
| TGAAGATCAACCTAAGGTGA+AGG | 0.619005 | 3.1:-4903567 | MS.gene56265:CDS |
| GGTTTCTGTTGGAATTCACA+AGG | 0.619618 | 3.1:-4905376 | MS.gene56265:CDS |
| TGAGGATGATGATACCAAGA+TGG | 0.620473 | 3.1:-4903525 | MS.gene56265:CDS |
| GAATTCTTCAGCCTGACATG+TGG | 0.621173 | 3.1:-4904147 | MS.gene56265:CDS |
| ATTCTTCAGCCTGACATGTG+GGG | 0.624402 | 3.1:-4904145 | MS.gene56265:CDS |
| TTAGACTGATGAGACTCCAC+AGG | 0.626794 | 3.1:+4904514 | None:intergenic |
| AGCGGTAGTCCTGTAAGCAA+GGG | 0.628820 | 3.1:-4904169 | MS.gene56265:CDS |
| TACAATCGCAGAGTGCTAAG+TGG | 0.632548 | 3.1:-4903965 | MS.gene56265:CDS |
| TCTGTTGAAAGTTGAAGGAG+TGG | 0.633162 | 3.1:-4905430 | MS.gene56265:CDS |
| ACCTCAACATATGATAATGA+GGG | 0.634892 | 3.1:-4905397 | MS.gene56265:CDS |
| GCCCGTGGTAGTTACATTCG+GGG | 0.635773 | 3.1:-4905126 | MS.gene56265:CDS |
| CCAAACCAGGTGCTTCATTG+GGG | 0.636999 | 3.1:+4904839 | None:intergenic |
| CTGCAGAAAGGTCAAACTTG+CGG | 0.641053 | 3.1:-4904369 | MS.gene56265:CDS |
| GTTAATATGGCTGTTGATCG+AGG | 0.643154 | 3.1:-4903764 | MS.gene56265:CDS |
| TTCCCCGAATGTAACTACCA+CGG | 0.643519 | 3.1:+4905124 | None:intergenic |
| GGCTAATTCATCAAGTTGAG+TGG | 0.644215 | 3.1:+4905954 | None:intergenic |
| GGTAGATGCAGTTGGCATAG+GGG | 0.644273 | 3.1:+4904039 | None:intergenic |
| ACTAGGAGAGGTTACTGCTG+TGG | 0.645274 | 3.1:-4904443 | MS.gene56265:CDS |
| TACACATCATCAGCAATCAA+CGG | 0.647516 | 3.1:+4905555 | None:intergenic |
| TGATACCAAGATGGCACAGA+TGG | 0.648530 | 3.1:-4903516 | MS.gene56265:CDS |
| AAATCTGCACAAGAACACAC+TGG | 0.648777 | 3.1:-4905610 | MS.gene56265:CDS |
| ATGTACGTTGTGAAGAGAGA+CGG | 0.651347 | 3.1:-4906111 | MS.gene56265:CDS |
| GCGGTAGTGCAATTGATGCA+AGG | 0.653069 | 3.1:+4904560 | None:intergenic |
| GAGAGACGGTCGTCAAGAGG+CGG | 0.654678 | 3.1:-4906097 | MS.gene56265:CDS |
| TCAAATATATCAGCATGCCA+TGG | 0.655929 | 3.1:+4904988 | None:intergenic |
| GTTCACAACATACGTGCCCG+TGG | 0.656567 | 3.1:-4905141 | MS.gene56265:CDS |
| TAATTCATCAAGTTGAGTGG+TGG | 0.658888 | 3.1:+4905957 | None:intergenic |
| AGATCAACCTAAGGTGAAGG+AGG | 0.659392 | 3.1:-4903564 | MS.gene56265:CDS |
| GTTCCGGCGTTGAAAAGTGT+AGG | 0.659447 | 3.1:+4905288 | None:intergenic |
| AATGGCATTTGATTCACCAG+AGG | 0.671867 | 3.1:-4904290 | MS.gene56265:CDS |
| CTGCACGTTATGTTGATCAG+GGG | 0.673705 | 3.1:-4905050 | MS.gene56265:CDS |
| GGTGACGCCTTTATAAACGC+CGG | 0.677755 | 3.1:+4905978 | None:intergenic |
| TCATTAGTAAATCTGCTGGA+GGG | 0.679752 | 3.1:-4905176 | MS.gene56265:CDS |
| TCAAAGCTTAAATATACACA+TGG | 0.684728 | 3.1:-4903723 | MS.gene56265:CDS |
| GGAAAGAGCTCGGAGCGATG+GGG | 0.686822 | 3.1:-4904878 | MS.gene56265:CDS |
| TGAAAGAGGATAGTATTGAG+GGG | 0.695012 | 3.1:-4905227 | MS.gene56265:CDS |
| GGCCCCTATGAAACTTATAG+CGG | 0.706024 | 3.1:-4904187 | MS.gene56265:CDS |
| ATTTGACTGAAATGGGACTG+TGG | 0.706027 | 3.1:-4903907 | MS.gene56265:CDS |
| AGAGGCTCAACAGTTAAACA+AGG | 0.706619 | 3.1:-4904272 | MS.gene56265:CDS |
| TTACGGATGCATAATCGGGG+TGG | 0.709619 | 3.1:+4905902 | None:intergenic |
| AAGAAGCAACTACTCAACTG+AGG | 0.713107 | 3.1:+4905258 | None:intergenic |
| TACCGCTATAAGTTTCATAG+GGG | 0.734200 | 3.1:+4904185 | None:intergenic |
| AAATTACGGATGCATAATCG+GGG | 0.740153 | 3.1:+4905899 | None:intergenic |
| GCACGTTATGTTGATCAGGG+GGG | 0.745631 | 3.1:-4905048 | MS.gene56265:CDS |
| GTTTCGACAAGATAACGGCG+AGG | 0.762520 | 3.1:-4906071 | MS.gene56265:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAACATCAATTATTTTATTA+AGG | + | chr3.1:4905173-4905192 | None:intergenic | 10.0% |
| !!! | ATCAATTATTTTATTAAGGT+TGG | + | chr3.1:4905169-4905188 | None:intergenic | 15.0% |
| !!! | TTTTGTTTTTTGAATTCTTT+TGG | - | chr3.1:4903762-4903781 | MS.gene56265:CDS | 15.0% |
| !! | AACAACAAAAAAATCATCAT+CGG | + | chr3.1:4903744-4903763 | None:intergenic | 20.0% |
| !! | AACAACAAAAAATTCATCAT+CGG | + | chr3.1:4903892-4903911 | None:intergenic | 20.0% |
| !! | ATTGAAAATAAATCATGGAA+AGG | - | chr3.1:4904624-4904643 | MS.gene56265:CDS | 20.0% |
| !! | TTGGAATTGAAAATAAATCA+TGG | - | chr3.1:4904619-4904638 | MS.gene56265:CDS | 20.0% |
| !!! | GTTTTGTTTTTGAATTGTTT+TGG | - | chr3.1:4903909-4903928 | MS.gene56265:CDS | 20.0% |
| !!! | TATTTTGACTTTGAAAAACT+AGG | - | chr3.1:4905120-4905139 | MS.gene56265:CDS | 20.0% |
| !!! | TTGTAGATATTAGAAGTATA+TGG | + | chr3.1:4905600-4905619 | None:intergenic | 20.0% |
| ! | AAGTCATATACAAAACTGTT+TGG | - | chr3.1:4905772-4905791 | MS.gene56265:intron | 25.0% |
| ! | AGTCATATACAAAACTGTTT+GGG | - | chr3.1:4905773-4905792 | MS.gene56265:intron | 25.0% |
| ! | GATAAGATTATCTATGACAA+TGG | - | chr3.1:4905711-4905730 | MS.gene56265:intron | 25.0% |
| ! | TCAAAGCTTAAATATACACA+TGG | - | chr3.1:4905857-4905876 | MS.gene56265:intron | 25.0% |
| ! | TGAAATTATCATGAAGAATG+CGG | - | chr3.1:4904048-4904067 | MS.gene56265:CDS | 25.0% |
| !! | GCAAAAGATATTGGTTAATA+TGG | - | chr3.1:4905803-4905822 | MS.gene56265:intron | 25.0% |
| !!! | AAATCCTTACATGCTTTTTA+AGG | - | chr3.1:4904888-4904907 | MS.gene56265:CDS | 25.0% |
| !!! | TTTTTAAGGATACTTGCAAT+AGG | - | chr3.1:4904902-4904921 | MS.gene56265:CDS | 25.0% |
| AAAATTACGGATGCATAATC+GGG | + | chr3.1:4903685-4903704 | None:intergenic | 30.0% | |
| ACGTTAAAGAACCCTAAAAA+AGG | + | chr3.1:4903712-4903731 | None:intergenic | 30.0% | |
| ATAATCTTATCCTTAAGTGC+AGG | + | chr3.1:4905702-4905721 | None:intergenic | 30.0% | |
| ATAGTGAGATAATCTACGAT+AGG | - | chr3.1:4904080-4904099 | MS.gene56265:CDS | 30.0% | |
| CTTCTTAACAGTTTCAGAAA+AGG | + | chr3.1:4903999-4904018 | None:intergenic | 30.0% | |
| GAAAATTACGGATGCATAAT+CGG | + | chr3.1:4903686-4903705 | None:intergenic | 30.0% | |
| TAAAAAAGGCGGGAAAATTA+CGG | + | chr3.1:4903698-4903717 | None:intergenic | 30.0% | |
| TAGTGAGATAATCTACGATA+GGG | - | chr3.1:4904081-4904100 | MS.gene56265:CDS | 30.0% | |
| TCTTATCTGTTGAAAGTTGA+AGG | - | chr3.1:4904145-4904164 | MS.gene56265:CDS | 30.0% | |
| TTAAAGAACCCTAAAAAAGG+CGG | + | chr3.1:4903709-4903728 | None:intergenic | 30.0% | |
| ! | ACCTCAACATATGATAATGA+GGG | - | chr3.1:4904183-4904202 | MS.gene56265:CDS | 30.0% |
| ! | ATGAAAGAGGATAGTATTGA+GGG | - | chr3.1:4904352-4904371 | MS.gene56265:CDS | 30.0% |
| ! | GTATCCTTAAAAAGCATGTA+AGG | + | chr3.1:4904895-4904914 | None:intergenic | 30.0% |
| ! | TGCTGATATATTTGACTTCT+TGG | - | chr3.1:4904600-4904619 | MS.gene56265:CDS | 30.0% |
| !! | TAATTTTCCCGCCTTTTTTA+GGG | - | chr3.1:4903698-4903717 | MS.gene56265:CDS | 30.0% |
| !!! | AGATTTATTTTACGCCCTTT+GGG | - | chr3.1:4904663-4904682 | MS.gene56265:CDS | 30.0% |
| !!! | CTTTTCTGAAACTGTTAAGA+AGG | - | chr3.1:4903997-4904016 | MS.gene56265:CDS | 30.0% |
| !!! | GATTTTGACTACGATTACTT+TGG | - | chr3.1:4904103-4904122 | MS.gene56265:CDS | 30.0% |
| !!! | TATATGACTTTTAGTTCAGC+AGG | + | chr3.1:4905762-4905781 | None:intergenic | 30.0% |
| !!! | TTGGATTTTGTTGATTCAGT+TGG | - | chr3.1:4903928-4903947 | MS.gene56265:CDS | 30.0% |
| AAATTACGGATGCATAATCG+GGG | + | chr3.1:4903684-4903703 | None:intergenic | 35.0% | |
| ACCCTCATTATCATATGTTG+AGG | + | chr3.1:4904187-4904206 | None:intergenic | 35.0% | |
| ACTACCGCTATAAGTTTCAT+AGG | + | chr3.1:4905400-4905419 | None:intergenic | 35.0% | |
| AGGTTGAAGAAACTCAGTTA+CGG | - | chr3.1:4903529-4903548 | MS.gene56265:CDS | 35.0% | |
| ATCATTACATGTCTCAGAGA+TGG | - | chr3.1:4904254-4904273 | MS.gene56265:CDS | 35.0% | |
| ATCTCTTTATGGAAAGAGCT+CGG | - | chr3.1:4904692-4904711 | MS.gene56265:CDS | 35.0% | |
| CAACAGATAAGACCTTTCTA+GGG | + | chr3.1:4904137-4904156 | None:intergenic | 35.0% | |
| CATGAAAGAGGATAGTATTG+AGG | - | chr3.1:4904351-4904370 | MS.gene56265:CDS | 35.0% | |
| CTACCGCTATAAGTTTCATA+GGG | + | chr3.1:4905399-4905418 | None:intergenic | 35.0% | |
| CTTCACGATTTGACTGAAAT+GGG | - | chr3.1:4905666-4905685 | MS.gene56265:intron | 35.0% | |
| GGAGATCAAGCAAAAGATAT+TGG | - | chr3.1:4905794-4905813 | MS.gene56265:intron | 35.0% | |
| GGGGATTTATGATACATTGA+AGG | - | chr3.1:4904372-4904391 | MS.gene56265:CDS | 35.0% | |
| GTTATTGCCAAGAATTTGAC+TGG | + | chr3.1:4905565-4905584 | None:intergenic | 35.0% | |
| TAAAGAACCCTAAAAAAGGC+GGG | + | chr3.1:4903708-4903727 | None:intergenic | 35.0% | |
| TACACATCATCAGCAATCAA+CGG | + | chr3.1:4904028-4904047 | None:intergenic | 35.0% | |
| TACACTCAGTATGAAAAAGC+AGG | - | chr3.1:4904796-4904815 | MS.gene56265:CDS | 35.0% | |
| TACCGCTATAAGTTTCATAG+GGG | + | chr3.1:4905398-4905417 | None:intergenic | 35.0% | |
| TACCTTCATACTACTAGGAA+TGG | - | chr3.1:4905272-4905291 | MS.gene56265:CDS | 35.0% | |
| TCAAAGAACCCTAAAAAAGG+CGG | + | chr3.1:4903857-4903876 | None:intergenic | 35.0% | |
| TCAAATATATCAGCATGCCA+TGG | + | chr3.1:4904595-4904614 | None:intergenic | 35.0% | |
| TCAACAGATAAGACCTTTCT+AGG | + | chr3.1:4904138-4904157 | None:intergenic | 35.0% | |
| TCATTAGTAAATCTGCTGGA+GGG | - | chr3.1:4904404-4904423 | MS.gene56265:CDS | 35.0% | |
| TCTTCACGATTTGACTGAAA+TGG | - | chr3.1:4905665-4905684 | MS.gene56265:intron | 35.0% | |
| TGTGAATTAGCTGCAAAAGA+AGG | - | chr3.1:4905372-4905391 | MS.gene56265:CDS | 35.0% | |
| TTGAAGTCACAGATAGAAAC+TGG | - | chr3.1:4904865-4904884 | MS.gene56265:CDS | 35.0% | |
| TTGGATTCAAAACCCTAGAA+AGG | - | chr3.1:4904122-4904141 | MS.gene56265:CDS | 35.0% | |
| TTGTCTGCTAGGATTGTTTA+GGG | - | chr3.1:4903800-4903819 | MS.gene56265:CDS | 35.0% | |
| ! | ATGATAATGAGGGTTTCTGT+TGG | - | chr3.1:4904193-4904212 | MS.gene56265:CDS | 35.0% |
| ! | ATTGTTTAGGGTTTAGGGTT+AGG | - | chr3.1:4903812-4903831 | MS.gene56265:CDS | 35.0% |
| ! | CAAGGAAGTAAGCTTTTGAT+AGG | + | chr3.1:4905892-4905911 | None:intergenic | 35.0% |
| ! | CATTTTCATGCTTGGTCAAA+GGG | - | chr3.1:4905912-4905931 | MS.gene56265:CDS | 35.0% |
| ! | CTAGGATTGTTTAGGGTTTA+GGG | - | chr3.1:4903807-4903826 | MS.gene56265:CDS | 35.0% |
| ! | GAAGTAAGCTTTTGATAGGT+AGG | + | chr3.1:4905888-4905907 | None:intergenic | 35.0% |
| ! | GACCTCAACATATGATAATG+AGG | - | chr3.1:4904182-4904201 | MS.gene56265:CDS | 35.0% |
| ! | GTAATTTTCCCGCCTTTTTT+AGG | - | chr3.1:4903697-4903716 | MS.gene56265:CDS | 35.0% |
| ! | TGAAAGAGGATAGTATTGAG+GGG | - | chr3.1:4904353-4904372 | MS.gene56265:CDS | 35.0% |
| ! | TGACTTTGAAAAACTAGGAG+AGG | - | chr3.1:4905125-4905144 | MS.gene56265:CDS | 35.0% |
| ! | TTGTTTAGGGTTTAGGGTTA+GGG | - | chr3.1:4903813-4903832 | MS.gene56265:CDS | 35.0% |
| !! | TAATTCATCAAGTTGAGTGG+TGG | + | chr3.1:4903626-4903645 | None:intergenic | 35.0% |
| !! | TATTGATTCAGTTGTCTGCT+AGG | - | chr3.1:4903789-4903808 | MS.gene56265:CDS | 35.0% |
| !! | TTCTGAAACTGTTAAGAAGG+CGG | - | chr3.1:4904000-4904019 | MS.gene56265:CDS | 35.0% |
| !!! | ATTTTGTTGATTCAGTTGGC+TGG | - | chr3.1:4903932-4903951 | MS.gene56265:CDS | 35.0% |
| !!! | CACAAGAAGTTTTAAGAGCA+TGG | + | chr3.1:4905356-4905375 | None:intergenic | 35.0% |
| !!! | CCTTTTTTAGGGTTCTTTGA+CGG | - | chr3.1:4903857-4903876 | MS.gene56265:CDS | 35.0% |
| !!! | GAGATTTATTTTACGCCCTT+TGG | - | chr3.1:4904662-4904681 | MS.gene56265:CDS | 35.0% |
| AAAAGCAACCAGCAGAATCT+GGG | - | chr3.1:4904925-4904944 | MS.gene56265:CDS | 40.0% | |
| AAATCTGCACAAGAACACAC+TGG | - | chr3.1:4903970-4903989 | MS.gene56265:CDS | 40.0% | |
| AAGAAGCAACTACTCAACTG+AGG | + | chr3.1:4904325-4904344 | None:intergenic | 40.0% | |
| AATGGCATTTGATTCACCAG+AGG | - | chr3.1:4905290-4905309 | MS.gene56265:CDS | 40.0% | |
| AATTCTTCAGCCTGACATGT+GGG | - | chr3.1:4905434-4905453 | MS.gene56265:CDS | 40.0% | |
| ACCTTTCTGCAGTTTCAACT+GGG | + | chr3.1:4905203-4905222 | None:intergenic | 40.0% | |
| ACTGCACGTTATGTTGATCA+GGG | - | chr3.1:4904529-4904548 | MS.gene56265:CDS | 40.0% | |
| ACTTTCTGAGCGACTAAAAC+AGG | + | chr3.1:4903577-4903596 | None:intergenic | 40.0% | |
| AGAGGCTCAACAGTTAAACA+AGG | - | chr3.1:4905308-4905327 | MS.gene56265:CDS | 40.0% | |
| AGTTACATTCGGGGAACAAA+CGG | - | chr3.1:4904463-4904482 | MS.gene56265:CDS | 40.0% | |
| ATGTACGTTGTGAAGAGAGA+CGG | - | chr3.1:4903469-4903488 | MS.gene56265:CDS | 40.0% | |
| ATTTGACTGAAATGGGACTG+TGG | - | chr3.1:4905673-4905692 | MS.gene56265:intron | 40.0% | |
| ATTTGACTGGTAGATGCAGT+TGG | + | chr3.1:4905552-4905571 | None:intergenic | 40.0% | |
| CAAAGAACCCTAAAAAAGGC+GGG | + | chr3.1:4903856-4903875 | None:intergenic | 40.0% | |
| CCCTTATCTCTTACAAAACG+CGG | + | chr3.1:4905042-4905061 | None:intergenic | 40.0% | |
| CCGTCAAAGAACCCTAAAAA+AGG | + | chr3.1:4903860-4903879 | None:intergenic | 40.0% | |
| GCATCTACCAGTCAAATTCT+TGG | - | chr3.1:4905555-4905574 | MS.gene56265:CDS | 40.0% | |
| GCTCTTTCCATAAAGAGATC+AGG | + | chr3.1:4904691-4904710 | None:intergenic | 40.0% | |
| GCTGATACCTTCATACTACT+AGG | - | chr3.1:4905267-4905286 | MS.gene56265:CDS | 40.0% | |
| GCTGTCATTAGTAAATCTGC+TGG | - | chr3.1:4904400-4904419 | MS.gene56265:CDS | 40.0% | |
| GGAACAAACGGAACATCTAA+TGG | - | chr3.1:4904475-4904494 | MS.gene56265:CDS | 40.0% | |
| GGTATCAACAGTGAACTTGA+TGG | + | chr3.1:4905985-4906004 | None:intergenic | 40.0% | |
| GGTTCGTTTCGACAAGATAA+CGG | - | chr3.1:4903504-4903523 | MS.gene56265:CDS | 40.0% | |
| GGTTTCTGTTGGAATTCACA+AGG | - | chr3.1:4904204-4904223 | MS.gene56265:CDS | 40.0% | |
| GTCATTAGTAAATCTGCTGG+AGG | - | chr3.1:4904403-4904422 | MS.gene56265:CDS | 40.0% | |
| GTTAATATGGCTGTTGATCG+AGG | - | chr3.1:4905816-4905835 | MS.gene56265:intron | 40.0% | |
| GTTGTCTGCTAGGATTGTTT+AGG | - | chr3.1:4903799-4903818 | MS.gene56265:CDS | 40.0% | |
| TACTGCACGTTATGTTGATC+AGG | - | chr3.1:4904528-4904547 | MS.gene56265:CDS | 40.0% | |
| TCAGTTGAGTAGTTGCTTCT+TGG | - | chr3.1:4904324-4904343 | MS.gene56265:CDS | 40.0% | |
| TCATTGAACACACGAAGCAT+TGG | + | chr3.1:4904508-4904527 | None:intergenic | 40.0% | |
| TCGGGAGATGATATCAAAGA+CGG | - | chr3.1:4905494-4905513 | MS.gene56265:CDS | 40.0% | |
| TCTCATCAGTCTAAGCTTGT+TGG | - | chr3.1:4905075-4905094 | MS.gene56265:CDS | 40.0% | |
| TCTCTGTTGGACTTGTATAC+TGG | + | chr3.1:4904987-4905006 | None:intergenic | 40.0% | |
| TCTGTTGAAAGTTGAAGGAG+TGG | - | chr3.1:4904150-4904169 | MS.gene56265:CDS | 40.0% | |
| TGAAGAATTCCCTTGCTTAC+AGG | + | chr3.1:4905423-4905442 | None:intergenic | 40.0% | |
| TGAAGATCAACCTAAGGTGA+AGG | - | chr3.1:4906013-4906032 | MS.gene56265:CDS | 40.0% | |
| TGACCAAGCATGAAAATGCA+AGG | + | chr3.1:4905910-4905929 | None:intergenic | 40.0% | |
| TGAGGATGATGATACCAAGA+TGG | - | chr3.1:4906055-4906074 | MS.gene56265:CDS | 40.0% | |
| TGATATCAAAGACGGGTGTA+CGG | - | chr3.1:4905502-4905521 | MS.gene56265:CDS | 40.0% | |
| TGCCATTCCTAGTAGTATGA+AGG | + | chr3.1:4905277-4905296 | None:intergenic | 40.0% | |
| TGCCATTGAAGATCAACCTA+AGG | - | chr3.1:4906007-4906026 | MS.gene56265:CDS | 40.0% | |
| TTGTTTAACTGTTGAGCCTC+TGG | + | chr3.1:4905309-4905328 | None:intergenic | 40.0% | |
| ! | ACCGCGTTTTGTAAGAGATA+AGG | - | chr3.1:4905038-4905057 | MS.gene56265:CDS | 40.0% |
| ! | AGAGTTTTCCCGCCTTTTTT+AGG | - | chr3.1:4903845-4903864 | MS.gene56265:CDS | 40.0% |
| ! | CCGCGTTTTGTAAGAGATAA+GGG | - | chr3.1:4905039-4905058 | MS.gene56265:CDS | 40.0% |
| ! | CTCATCAGTCTAAGCTTGTT+GGG | - | chr3.1:4905076-4905095 | MS.gene56265:CDS | 40.0% |
| ! | CTTCCTTGCATTTTCATGCT+TGG | - | chr3.1:4905904-4905923 | MS.gene56265:intron | 40.0% |
| ! | GCATTTTCATGCTTGGTCAA+AGG | - | chr3.1:4905911-4905930 | MS.gene56265:CDS | 40.0% |
| ! | GCTAGGATTGTTTAGGGTTT+AGG | - | chr3.1:4903806-4903825 | MS.gene56265:CDS | 40.0% |
| !! | CACCTTAGGTTGATCTTCAA+TGG | + | chr3.1:4906012-4906031 | None:intergenic | 40.0% |
| !! | CTTCTTGGTTTGCATGAAAG+AGG | - | chr3.1:4904339-4904358 | MS.gene56265:CDS | 40.0% |
| !! | GAGTTTTCCCGCCTTTTTTA+GGG | - | chr3.1:4903846-4903865 | MS.gene56265:CDS | 40.0% |
| !! | GGCTAATTCATCAAGTTGAG+TGG | + | chr3.1:4903629-4903648 | None:intergenic | 40.0% |
| AAAGAGATCAGGCACCCAAA+GGG | + | chr3.1:4904680-4904699 | None:intergenic | 45.0% | |
| AAGAGATAAGGGTTTGCCTG+TGG | - | chr3.1:4905050-4905069 | MS.gene56265:CDS | 45.0% | |
| ACCCAGTTGAAACTGCAGAA+AGG | - | chr3.1:4905199-4905218 | MS.gene56265:CDS | 45.0% | |
| ACCCTGAACTCCAATACCAA+TGG | + | chr3.1:4905244-4905263 | None:intergenic | 45.0% | |
| ACTGTGGAATCCTGCACTTA+AGG | - | chr3.1:4905689-4905708 | MS.gene56265:intron | 45.0% | |
| AGATCAACCTAAGGTGAAGG+AGG | - | chr3.1:4906016-4906035 | MS.gene56265:CDS | 45.0% | |
| AGTAAATCTGCTGGAGGGAT+TGG | - | chr3.1:4904409-4904428 | MS.gene56265:CDS | 45.0% | |
| ATTCTTCAGCCTGACATGTG+GGG | - | chr3.1:4905435-4905454 | MS.gene56265:CDS | 45.0% | |
| CAACTACTCAACTGAGGTCT+AGG | + | chr3.1:4904319-4904338 | None:intergenic | 45.0% | |
| CCCTGAACTCCAATACCAAT+GGG | + | chr3.1:4905243-4905262 | None:intergenic | 45.0% | |
| CGGGAGATGATATCAAAGAC+GGG | - | chr3.1:4905495-4905514 | MS.gene56265:CDS | 45.0% | |
| CTGCACGTTATGTTGATCAG+GGG | - | chr3.1:4904530-4904549 | MS.gene56265:CDS | 45.0% | |
| CTGCAGAAAGGTCAAACTTG+CGG | - | chr3.1:4905211-4905230 | MS.gene56265:CDS | 45.0% | |
| GAAAAGCAACCAGCAGAATC+TGG | - | chr3.1:4904924-4904943 | MS.gene56265:CDS | 45.0% | |
| GAAAGTTGAAGGAGTGGTTG+TGG | - | chr3.1:4904156-4904175 | MS.gene56265:CDS | 45.0% | |
| GAATTCTTCAGCCTGACATG+TGG | - | chr3.1:4905433-4905452 | MS.gene56265:CDS | 45.0% | |
| GACCTTTCTGCAGTTTCAAC+TGG | + | chr3.1:4905204-4905223 | None:intergenic | 45.0% | |
| GGCCCCTATGAAACTTATAG+CGG | - | chr3.1:4905393-4905412 | MS.gene56265:CDS | 45.0% | |
| GGTCAAAGGGTTTGAAGACT+GGG | - | chr3.1:4905925-4905944 | MS.gene56265:CDS | 45.0% | |
| TAAAGAGATCAGGCACCCAA+AGG | + | chr3.1:4904681-4904700 | None:intergenic | 45.0% | |
| TAATTGTGCCCAGATTCTGC+TGG | + | chr3.1:4904936-4904955 | None:intergenic | 45.0% | |
| TCCCTCCAATTTGTGGGATT+GGG | - | chr3.1:4905464-4905483 | MS.gene56265:CDS | 45.0% | |
| TGATACCAAGATGGCACAGA+TGG | - | chr3.1:4906064-4906083 | MS.gene56265:CDS | 45.0% | |
| TGCACGTTATGTTGATCAGG+GGG | - | chr3.1:4904531-4904550 | MS.gene56265:CDS | 45.0% | |
| TGGTAGATGCAGTTGGCATA+GGG | + | chr3.1:4905545-4905564 | None:intergenic | 45.0% | |
| TGGTCAAAGGGTTTGAAGAC+TGG | - | chr3.1:4905924-4905943 | MS.gene56265:CDS | 45.0% | |
| TGTGACTCCCTCCAATTTGT+GGG | - | chr3.1:4905458-4905477 | MS.gene56265:CDS | 45.0% | |
| TTACACACAGCAGTCTCTGT+TGG | + | chr3.1:4905000-4905019 | None:intergenic | 45.0% | |
| TTAGACTGATGAGACTCCAC+AGG | + | chr3.1:4905069-4905088 | None:intergenic | 45.0% | |
| TTCCCCGAATGTAACTACCA+CGG | + | chr3.1:4904459-4904478 | None:intergenic | 45.0% | |
| TTGGGTGCCTGATCTCTTTA+TGG | - | chr3.1:4904681-4904700 | MS.gene56265:CDS | 45.0% | |
| TTGTTCAAGCACAGAGTCTG+TGG | - | chr3.1:4904833-4904852 | MS.gene56265:CDS | 45.0% | |
| ! | ACCCATTGGTATTGGAGTTC+AGG | - | chr3.1:4905239-4905258 | MS.gene56265:CDS | 45.0% |
| ! | ACTCCTACACTTTTCAACGC+CGG | - | chr3.1:4904289-4904308 | MS.gene56265:CDS | 45.0% |
| ! | AGGGTTTAGGGTTAGGGTTA+GGG | - | chr3.1:4903819-4903838 | MS.gene56265:CDS | 45.0% |
| ! | AGGTTGATCTTCAATGGCAG+AGG | + | chr3.1:4906006-4906025 | None:intergenic | 45.0% |
| ! | CCCATTGGTATTGGAGTTCA+GGG | - | chr3.1:4905240-4905259 | MS.gene56265:CDS | 45.0% |
| ! | TACAATCGCAGAGTGCTAAG+TGG | - | chr3.1:4905615-4905634 | MS.gene56265:CDS | 45.0% |
| ! | TAGGGTTTAGGGTTAGGGTT+AGG | - | chr3.1:4903818-4903837 | MS.gene56265:CDS | 45.0% |
| !! | ACCTGGTTTGGCAGATTGTT+GGG | - | chr3.1:4904753-4904772 | MS.gene56265:CDS | 45.0% |
| !! | AGGTGCTTTTGCTGTGTACT+TGG | - | chr3.1:4904567-4904586 | MS.gene56265:CDS | 45.0% |
| !! | TGTTGATTCAGTTGGCTGGT+AGG | - | chr3.1:4903936-4903955 | MS.gene56265:CDS | 45.0% |
| ACCCCAATCCCACAAATTGG+AGG | + | chr3.1:4905469-4905488 | None:intergenic | 50.0% | |
| ACTAGGAGAGGTTACTGCTG+TGG | - | chr3.1:4905137-4905156 | MS.gene56265:CDS | 50.0% | |
| AGAGATGAGTGTACGTCCTG+TGG | - | chr3.1:4906104-4906123 | MS.gene56265:CDS | 50.0% | |
| AGCGGTAGTCCTGTAAGCAA+GGG | - | chr3.1:4905411-4905430 | MS.gene56265:CDS | 50.0% | |
| CAACTGAGGTCTAGGTGTTC+CGG | + | chr3.1:4904311-4904330 | None:intergenic | 50.0% | |
| CATCACTTGCAGCTCGTGTT+CGG | + | chr3.1:4905962-4905981 | None:intergenic | 50.0% | |
| CATGAAGAATGCGGCTCGAT+TGG | - | chr3.1:4904057-4904076 | MS.gene56265:CDS | 50.0% | |
| CCAAACCAGGTGCTTCATTG+GGG | + | chr3.1:4904744-4904763 | None:intergenic | 50.0% | |
| CCCCAATCCCACAAATTGGA+GGG | + | chr3.1:4905468-4905487 | None:intergenic | 50.0% | |
| CCCTCCAATTTGTGGGATTG+GGG | - | chr3.1:4905465-4905484 | MS.gene56265:CDS | 50.0% | |
| CTCCCTCCAATTTGTGGGAT+TGG | - | chr3.1:4905463-4905482 | MS.gene56265:CDS | 50.0% | |
| CTGGTAGATGCAGTTGGCAT+AGG | + | chr3.1:4905546-4905565 | None:intergenic | 50.0% | |
| GCACGTTATGTTGATCAGGG+GGG | - | chr3.1:4904532-4904551 | MS.gene56265:CDS | 50.0% | |
| GCCAAACCAGGTGCTTCATT+GGG | + | chr3.1:4904745-4904764 | None:intergenic | 50.0% | |
| GCGGTAGTGCAATTGATGCA+AGG | + | chr3.1:4905023-4905042 | None:intergenic | 50.0% | |
| GGCAGATGATGCTGAGAATG+AGG | - | chr3.1:4906037-4906056 | MS.gene56265:CDS | 50.0% | |
| GGTAGATGCAGTTGGCATAG+GGG | + | chr3.1:4905544-4905563 | None:intergenic | 50.0% | |
| GGTGACGCCTTTATAAACGC+CGG | + | chr3.1:4903605-4903624 | None:intergenic | 50.0% | |
| GTGCCCGTGGTAGTTACATT+CGG | - | chr3.1:4904452-4904471 | MS.gene56265:CDS | 50.0% | |
| GTGTGACTCCCTCCAATTTG+TGG | - | chr3.1:4905457-4905476 | MS.gene56265:CDS | 50.0% | |
| TAGCGGTAGTCCTGTAAGCA+AGG | - | chr3.1:4905410-4905429 | MS.gene56265:CDS | 50.0% | |
| TCATCTGCCTCCTTCACCTT+AGG | + | chr3.1:4906026-4906045 | None:intergenic | 50.0% | |
| TCCCCGAATGTAACTACCAC+GGG | + | chr3.1:4904458-4904477 | None:intergenic | 50.0% | |
| TGCACCCCAATCCCACAAAT+TGG | + | chr3.1:4905472-4905491 | None:intergenic | 50.0% | |
| TGCATAATCGGGGTGGTTAG+CGG | + | chr3.1:4903674-4903693 | None:intergenic | 50.0% | |
| TGCCAAACCAGGTGCTTCAT+TGG | + | chr3.1:4904746-4904765 | None:intergenic | 50.0% | |
| TGCCCGTGGTAGTTACATTC+GGG | - | chr3.1:4904453-4904472 | MS.gene56265:CDS | 50.0% | |
| TGCTTCATTGGGGCAGAACA+GGG | + | chr3.1:4904734-4904753 | None:intergenic | 50.0% | |
| TTACGGATGCATAATCGGGG+TGG | + | chr3.1:4903681-4903700 | None:intergenic | 50.0% | |
| TTGCTGTGTACTTGGAGCCA+TGG | - | chr3.1:4904575-4904594 | MS.gene56265:CDS | 50.0% | |
| ! | GTTCCGGCGTTGAAAAGTGT+AGG | + | chr3.1:4904295-4904314 | None:intergenic | 50.0% |
| ! | GTTTCGACAAGATAACGGCG+AGG | - | chr3.1:4903509-4903528 | MS.gene56265:CDS | 50.0% |
| ! | GTTTGCGCCGGCGTTTATAA+AGG | - | chr3.1:4903595-4903614 | MS.gene56265:CDS | 50.0% |
| !! | CACCTGGTTTGGCAGATTGT+TGG | - | chr3.1:4904752-4904771 | MS.gene56265:CDS | 50.0% |
| !! | CCTGGTTTGGCAGATTGTTG+GGG | - | chr3.1:4904754-4904773 | MS.gene56265:CDS | 50.0% |
| !! | TCTAAGCTTGTTGGGAGCAG+AGG | - | chr3.1:4905084-4905103 | MS.gene56265:CDS | 50.0% |
| AACTTGCGGCACAGACCCAT+TGG | - | chr3.1:4905225-4905244 | MS.gene56265:CDS | 55.0% | |
| ATGGAAAGAGCTCGGAGCGA+TGG | - | chr3.1:4904700-4904719 | MS.gene56265:CDS | 55.0% | |
| CCCCAACAATCTGCCAAACC+AGG | + | chr3.1:4904757-4904776 | None:intergenic | 55.0% | |
| CGGCACAGACCCATTGGTAT+TGG | - | chr3.1:4905231-4905250 | MS.gene56265:CDS | 55.0% | |
| CGTTATGTTGATCAGGGGGG+AGG | - | chr3.1:4904535-4904554 | MS.gene56265:CDS | 55.0% | |
| GAAGAGAGACGGTCGTCAAG+AGG | - | chr3.1:4903480-4903499 | MS.gene56265:CDS | 55.0% | |
| GCACACCATCTGTGCCATCT+TGG | + | chr3.1:4906072-4906091 | None:intergenic | 55.0% | |
| GCCCGTGGTAGTTACATTCG+GGG | - | chr3.1:4904454-4904473 | MS.gene56265:CDS | 55.0% | |
| GTCGCTCAGAAAGTTTGCGC+CGG | - | chr3.1:4903583-4903602 | MS.gene56265:CDS | 55.0% | |
| GTGCTTCATTGGGGCAGAAC+AGG | + | chr3.1:4904735-4904754 | None:intergenic | 55.0% | |
| GTTCACAACATACGTGCCCG+TGG | - | chr3.1:4904439-4904458 | MS.gene56265:CDS | 55.0% | |
| TGGAAAGAGCTCGGAGCGAT+GGG | - | chr3.1:4904701-4904720 | MS.gene56265:CDS | 55.0% | |
| TGTGGGATTGGGGTGCACTT+CGG | - | chr3.1:4905475-4905494 | MS.gene56265:CDS | 55.0% | |
| ! | CCCCAATGAAGCACCTGGTT+TGG | - | chr3.1:4904741-4904760 | MS.gene56265:CDS | 55.0% |
| ! | GGAGCAGAGGCTCTAGTAGT+CGG | - | chr3.1:4905097-4905116 | MS.gene56265:CDS | 55.0% |
| ! | TTCTGCCCCAATGAAGCACC+TGG | - | chr3.1:4904736-4904755 | MS.gene56265:CDS | 55.0% |
| CACTTGCAGCTCGTGTTCGG+AGG | + | chr3.1:4905959-4905978 | None:intergenic | 60.0% | |
| GAGAGACGGTCGTCAAGAGG+CGG | - | chr3.1:4903483-4903502 | MS.gene56265:CDS | 60.0% | |
| GGAAAGAGCTCGGAGCGATG+GGG | - | chr3.1:4904702-4904721 | MS.gene56265:CDS | 60.0% | |
| GGAGTCACACCCCACATGTC+AGG | + | chr3.1:4905447-4905466 | None:intergenic | 60.0% | |
| GTGGGATTGGGGTGCACTTC+GGG | - | chr3.1:4905476-4905495 | MS.gene56265:CDS | 60.0% | |
| TTGATCAGGGGGGAGGCAAG+AGG | - | chr3.1:4904542-4904561 | MS.gene56265:CDS | 60.0% | |
| CAGGGGGGAGGCAAGAGGAA+AGG | - | chr3.1:4904547-4904566 | MS.gene56265:CDS | 65.0% | |
| GAGCTCGGAGCGATGGGGAA+TGG | - | chr3.1:4904707-4904726 | MS.gene56265:CDS | 65.0% | |
| GGGGTGGTTAGCGGTCATGC+CGG | + | chr3.1:4903665-4903684 | None:intergenic | 65.0% | |
| GTGGTTAGCGGTCATGCCGG+CGG | + | chr3.1:4903662-4903681 | None:intergenic | 65.0% | |
| TTAGCCGCTGAAACCGCCGC+CGG | - | chr3.1:4903643-4903662 | MS.gene56265:CDS | 65.0% | |
| CATGCCGGCGGCGGTTTCAG+CGG | + | chr3.1:4903650-4903669 | None:intergenic | 70.0% | |
| GTTAGCGGTCATGCCGGCGG+CGG | + | chr3.1:4903659-4903678 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 4903469 | 4906133 | 4903469 | ID=MS.gene56265 |
| chr3.1 | mRNA | 4903469 | 4906133 | 4903469 | ID=MS.gene56265.t1;Parent=MS.gene56265 |
| chr3.1 | exon | 4905906 | 4906133 | 4905906 | ID=MS.gene56265.t1.exon1;Parent=MS.gene56265.t1 |
| chr3.1 | CDS | 4905906 | 4906133 | 4905906 | ID=cds.MS.gene56265.t1;Parent=MS.gene56265.t1 |
| chr3.1 | exon | 4903469 | 4905655 | 4903469 | ID=MS.gene56265.t1.exon2;Parent=MS.gene56265.t1 |
| chr3.1 | CDS | 4903469 | 4905655 | 4903469 | ID=cds.MS.gene56265.t1;Parent=MS.gene56265.t1 |
| Gene Sequence |
| Protein sequence |
