Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56662.t1 | XP_003616599.1 | 99 | 479 | 5 | 0 | 1 | 479 | 1 | 479 | 3.30E-279 | 970.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56662.t1 | Q9FEL8 | 99.0 | 479 | 5 | 0 | 1 | 479 | 1 | 479 | 7.8e-282 | 970.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56662.t1 | G7KGX5 | 99.0 | 479 | 5 | 0 | 1 | 479 | 1 | 479 | 2.3e-279 | 970.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05894 | MS.gene56662 | 0.804687 | 1.92E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56662.t1 | MTR_5g082220 | 98.956 | 479 | 5 | 0 | 1 | 479 | 1 | 479 | 0.0 | 979 |
| MS.gene56662.t1 | MTR_5g082220 | 98.934 | 469 | 5 | 0 | 11 | 479 | 1 | 469 | 0.0 | 958 |
| MS.gene56662.t1 | MTR_7g067450 | 85.043 | 468 | 67 | 2 | 1 | 466 | 1 | 467 | 0.0 | 828 |
| MS.gene56662.t1 | MTR_4g415390 | 84.154 | 467 | 73 | 1 | 1 | 466 | 1 | 467 | 0.0 | 825 |
| MS.gene56662.t1 | MTR_4g073770 | 76.709 | 468 | 105 | 1 | 9 | 472 | 2 | 469 | 0.0 | 759 |
| MS.gene56662.t1 | MTR_3g072870 | 79.241 | 448 | 93 | 0 | 21 | 468 | 15 | 462 | 0.0 | 742 |
| MS.gene56662.t1 | MTR_4g415390 | 85.294 | 408 | 59 | 1 | 1 | 407 | 1 | 408 | 0.0 | 726 |
| MS.gene56662.t1 | MTR_4g055610 | 24.138 | 435 | 280 | 15 | 1 | 404 | 4 | 419 | 1.61e-13 | 72.8 |
| MS.gene56662.t1 | MTR_8g099320 | 24.524 | 473 | 285 | 23 | 22 | 460 | 13 | 447 | 5.74e-13 | 71.2 |
| MS.gene56662.t1 | MTR_1g492640 | 21.844 | 499 | 316 | 15 | 6 | 462 | 14 | 480 | 5.84e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56662.t1 | AT2G38120 | 83.761 | 468 | 72 | 1 | 5 | 468 | 2 | 469 | 0.0 | 820 |
| MS.gene56662.t1 | AT5G01240 | 78.601 | 486 | 97 | 3 | 1 | 479 | 1 | 486 | 0.0 | 788 |
| MS.gene56662.t1 | AT2G21050 | 78.146 | 453 | 96 | 1 | 17 | 466 | 9 | 461 | 0.0 | 746 |
| MS.gene56662.t1 | AT1G77690 | 78.509 | 456 | 93 | 1 | 21 | 471 | 15 | 470 | 0.0 | 726 |
| MS.gene56662.t1 | AT2G38120 | 84.069 | 408 | 61 | 1 | 5 | 408 | 2 | 409 | 0.0 | 716 |
| MS.gene56662.t1 | AT5G01240 | 82.759 | 406 | 69 | 1 | 75 | 479 | 1 | 406 | 0.0 | 701 |
Find 112 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATAATCTTCCCTTTCTT+TGG | 0.196484 | 5.1:+64400483 | MS.gene56662:CDS |
| AACTGCACTTTCCTTCTCTT+TGG | 0.203019 | 5.1:+64397488 | MS.gene56662:CDS |
| CTCAGCTGTAGGGGCTCTTT+TGG | 0.244420 | 5.1:+64400515 | MS.gene56662:CDS |
| AAGGTTTACTTGGTCCTTAT+TGG | 0.255074 | 5.1:+64397444 | MS.gene56662:CDS |
| AATCCAATTGCTTTCCAATA+AGG | 0.261089 | 5.1:-64397458 | None:intergenic |
| AGCCCCTACAGCTGAGTTAA+TGG | 0.289657 | 5.1:-64400508 | None:intergenic |
| TCTCAGCTAGGAATGATTTC+AGG | 0.305170 | 5.1:+64397017 | MS.gene56662:CDS |
| ATCAAACAAGTTGACACATT+TGG | 0.306547 | 5.1:+64402192 | MS.gene56662:CDS |
| CATTCCATAACTATAGGATT+TGG | 0.310810 | 5.1:+64397740 | MS.gene56662:CDS |
| CTGCTCATATGCTCACTTAT+AGG | 0.316484 | 5.1:+64400568 | MS.gene56662:CDS |
| TCATTCGGGCCCAAACAAAA+TGG | 0.318533 | 5.1:+64398391 | MS.gene56662:CDS |
| ATTTGGTCTTTCCTTGGCCT+TGG | 0.319258 | 5.1:+64397757 | MS.gene56662:CDS |
| TGGGTTACTATTGTAGGCTT+TGG | 0.321342 | 5.1:+64402138 | MS.gene56662:CDS |
| AAATTGCAGTTTATCACCTT+TGG | 0.321885 | 5.1:+64400342 | MS.gene56662:intron |
| ATCTGCAATTGCTGTCTATT+GGG | 0.331890 | 5.1:+64399954 | MS.gene56662:CDS |
| ATCATATTCCAAGTCTTCTA+TGG | 0.331967 | 5.1:+64397041 | MS.gene56662:CDS |
| ACCATTGCAGCCATTGTTCA+TGG | 0.335047 | 5.1:+64397808 | MS.gene56662:CDS |
| ACTATTGTAGGCTTTGGATT+TGG | 0.339464 | 5.1:+64402144 | MS.gene56662:CDS |
| GTACACCATTGTACTTTGTA+TGG | 0.339983 | 5.1:+64400373 | MS.gene56662:CDS |
| TTCTCTCTTCTTCCTCGTAA+TGG | 0.341226 | 5.1:+64400012 | MS.gene56662:CDS |
| TGGTTGGAAGCTGGTAGTTT+TGG | 0.342663 | 5.1:-64402243 | None:intergenic |
| GTTGAAAATGTGGTTCATTC+GGG | 0.342951 | 5.1:+64398377 | MS.gene56662:CDS |
| CATCTGCAATTGCTGTCTAT+TGG | 0.344851 | 5.1:+64399953 | MS.gene56662:CDS |
| ATTGCTGTCTATTGGGCCTT+TGG | 0.346170 | 5.1:+64399961 | MS.gene56662:CDS |
| TACCTTCATTCCATAACTAT+AGG | 0.359384 | 5.1:+64397734 | MS.gene56662:CDS |
| CCAAGTCTTCTATGGATTGA+TGG | 0.363039 | 5.1:+64397049 | MS.gene56662:CDS |
| TACCTGTGGTAATACCAATA+TGG | 0.369780 | 5.1:+64400454 | MS.gene56662:CDS |
| TCAATGCGTTTGTGGTGATA+TGG | 0.371914 | 5.1:+64402118 | MS.gene56662:CDS |
| GTTTAGCTGTGCCTCAAATC+AGG | 0.376028 | 5.1:+64396671 | MS.gene56662:CDS |
| GTGATATGGGTTACTATTGT+AGG | 0.377453 | 5.1:+64402132 | MS.gene56662:CDS |
| GGTTGAAAATGTGGTTCATT+CGG | 0.380459 | 5.1:+64398376 | MS.gene56662:intron |
| TGTCCAGCTTGGAATAACTT+TGG | 0.383837 | 5.1:-64402082 | None:intergenic |
| TATAGGATTTGGTCTTTCCT+TGG | 0.389353 | 5.1:+64397751 | MS.gene56662:CDS |
| CCTAGCTGAGAGAATGAGTA+TGG | 0.392121 | 5.1:-64397005 | None:intergenic |
| TTGTGCTATGCAGGTTGCTC+AGG | 0.396612 | 5.1:+64396968 | MS.gene56662:intron |
| GTCCAGCTTGGAATAACTTT+GGG | 0.396864 | 5.1:-64402081 | None:intergenic |
| GGTCCTTATTGGAAAGCAAT+TGG | 0.400537 | 5.1:+64397455 | MS.gene56662:CDS |
| GTGGTTCTGTTTATGATGCT+TGG | 0.403944 | 5.1:+64396649 | MS.gene56662:CDS |
| CTCTTCTTCCTCGTAATGGC+TGG | 0.404036 | 5.1:+64400016 | MS.gene56662:CDS |
| CGTAATGGCTGGCGCGATGC+TGG | 0.414035 | 5.1:+64400027 | MS.gene56662:CDS |
| GTCCCATTAACTCAGCTGTA+GGG | 0.417428 | 5.1:+64400505 | MS.gene56662:CDS |
| GCCCCTACAGCTGAGTTAAT+GGG | 0.419976 | 5.1:-64400507 | None:intergenic |
| AAAGGAGGAAGTCCTGCTTC+TGG | 0.424897 | 5.1:+64396603 | MS.gene56662:CDS |
| AAGACCAAATCCTATAGTTA+TGG | 0.426171 | 5.1:-64397744 | None:intergenic |
| CGGGCCCAAACAAAATGGTT+TGG | 0.434285 | 5.1:+64398396 | MS.gene56662:CDS |
| ATTGTAGGCTTTGGATTTGG+AGG | 0.436501 | 5.1:+64402147 | MS.gene56662:CDS |
| TCTATGGATTGATGGGTAGT+TGG | 0.437857 | 5.1:+64397057 | MS.gene56662:CDS |
| ACAAACATACTCTATACTTT+CGG | 0.447950 | 5.1:+64398434 | MS.gene56662:CDS |
| TAGGCTTTGGATTTGGAGGG+TGG | 0.452037 | 5.1:+64402151 | MS.gene56662:CDS |
| TGCAGCCATTGTTCATGGCC+AGG | 0.460038 | 5.1:+64397813 | MS.gene56662:CDS |
| GAAGTGTTGGAAGGTTTACT+TGG | 0.460498 | 5.1:+64397434 | MS.gene56662:CDS |
| CCATCAATCCATAGAAGACT+TGG | 0.461378 | 5.1:-64397049 | None:intergenic |
| CAATGCGTTTGTGGTGATAT+GGG | 0.469730 | 5.1:+64402119 | MS.gene56662:CDS |
| AAAATGGTTTGGTATTTCAC+TGG | 0.475766 | 5.1:+64398407 | MS.gene56662:CDS |
| GGTCCCATTAACTCAGCTGT+AGG | 0.479143 | 5.1:+64400504 | MS.gene56662:CDS |
| GTGAGCATATGAGCAGAAGC+AGG | 0.483246 | 5.1:-64400561 | None:intergenic |
| GAGTTAATGGGACCAAAGAA+AGG | 0.483622 | 5.1:-64400495 | None:intergenic |
| ATCCTATAGTTATGGAATGA+AGG | 0.485031 | 5.1:-64397736 | None:intergenic |
| GAAGAAAGAGAGGAAGAGAA+AGG | 0.487462 | 5.1:+64396585 | MS.gene56662:CDS |
| TAGGTCTGCTTCAGCAAGAC+AGG | 0.490465 | 5.1:+64400587 | MS.gene56662:CDS |
| TGTTCAGTGGTTTGAAGTGT+TGG | 0.499171 | 5.1:+64397421 | MS.gene56662:intron |
| CATTGGAATGGTCTAAAAGT+TGG | 0.499848 | 5.1:-64399987 | None:intergenic |
| TTGTAGGCTTTGGATTTGGA+GGG | 0.502238 | 5.1:+64402148 | MS.gene56662:CDS |
| TTATTGGAAAGCAATTGGAT+TGG | 0.508834 | 5.1:+64397460 | MS.gene56662:CDS |
| CAAGTCTTCTATGGATTGAT+GGG | 0.510221 | 5.1:+64397050 | MS.gene56662:CDS |
| TACACCATTGTACTTTGTAT+GGG | 0.512262 | 5.1:+64400374 | MS.gene56662:CDS |
| TGCCCAAAGTTATTCCAAGC+TGG | 0.514353 | 5.1:+64402079 | MS.gene56662:CDS |
| TGCATTGTGTGGTTGGAAGC+TGG | 0.515689 | 5.1:-64402252 | None:intergenic |
| CAGTGGTTTGAAGTGTTGGA+AGG | 0.520983 | 5.1:+64397425 | MS.gene56662:intron |
| GAAAGTATAGAGTATGTTTG+TGG | 0.523457 | 5.1:-64398432 | None:intergenic |
| ACCTTGCACAAGCTATGAGC+TGG | 0.526422 | 5.1:-64397520 | None:intergenic |
| AATCTTGATGCTCATTCACC+AGG | 0.528000 | 5.1:+64400053 | MS.gene56662:CDS |
| TAGATAGCTTTGAACTTCTG+AGG | 0.532486 | 5.1:-64399892 | None:intergenic |
| GTCTAAAAGTTGGTCACCAA+AGG | 0.541669 | 5.1:-64399977 | None:intergenic |
| AGGCTTTGGATTTGGAGGGT+GGG | 0.541795 | 5.1:+64402152 | MS.gene56662:CDS |
| GACAGCAATTGCAGATGGTA+GGG | 0.544239 | 5.1:-64399947 | None:intergenic |
| GTATGTGATCAATGCGTTTG+TGG | 0.545120 | 5.1:+64402110 | MS.gene56662:CDS |
| TCAGTGATGCATTGTGTGGT+TGG | 0.549027 | 5.1:-64402259 | None:intergenic |
| AGGAAGAAGAGAGAAAGCAT+TGG | 0.554247 | 5.1:-64400004 | None:intergenic |
| TCCCATTAACTCAGCTGTAG+GGG | 0.554568 | 5.1:+64400506 | MS.gene56662:CDS |
| GAAAGAGAGGAAGAGAAAGG+AGG | 0.560980 | 5.1:+64396588 | MS.gene56662:CDS |
| TAAATGATCACTTGGACAAG+AGG | 0.560995 | 5.1:+64397665 | MS.gene56662:CDS |
| ACATACATTAATGTCCAGCT+TGG | 0.561694 | 5.1:-64402093 | None:intergenic |
| TTTGTATGGGAGAAAGTGAT+AGG | 0.563037 | 5.1:+64400387 | MS.gene56662:CDS |
| ATACTACATAAATGATCACT+TGG | 0.572338 | 5.1:+64397657 | MS.gene56662:CDS |
| AACATACTCTATACTTTCGG+CGG | 0.574413 | 5.1:+64398437 | MS.gene56662:CDS |
| AACCATATTGGTATTACCAC+AGG | 0.579597 | 5.1:-64400456 | None:intergenic |
| TGAGCTGAATGAAGAAAGAG+AGG | 0.580396 | 5.1:+64396575 | MS.gene56662:CDS |
| ATGTGGTCATGCCAAGGCCA+AGG | 0.583435 | 5.1:-64397768 | None:intergenic |
| AGACAGCAATTGCAGATGGT+AGG | 0.583784 | 5.1:-64399948 | None:intergenic |
| GCCATGAACAATGGCTGCAA+TGG | 0.586565 | 5.1:-64397809 | None:intergenic |
| TGAGCATATGAGCAGAAGCA+GGG | 0.587049 | 5.1:-64400560 | None:intergenic |
| AAATTCTTGAAACCAGAAGC+AGG | 0.591722 | 5.1:-64396615 | None:intergenic |
| TGTTGAGTACAGAAGCAGAA+AGG | 0.592653 | 5.1:+64397106 | MS.gene56662:CDS |
| GCATGACCACATACACAGCT+TGG | 0.597088 | 5.1:+64397779 | MS.gene56662:CDS |
| GAAGAGAGAAAGCATTGGAA+TGG | 0.598851 | 5.1:-64399999 | None:intergenic |
| ATCACTTGGACAAGAGGACA+TGG | 0.603761 | 5.1:+64397671 | MS.gene56662:CDS |
| ACATACTCTATACTTTCGGC+GGG | 0.607513 | 5.1:+64398438 | MS.gene56662:CDS |
| AGTTAATGGGACCAAAGAAA+GGG | 0.609314 | 5.1:-64400494 | None:intergenic |
| CCATACTCATTCTCTCAGCT+AGG | 0.611915 | 5.1:+64397005 | MS.gene56662:CDS |
| CAATAGACAGCAATTGCAGA+TGG | 0.612371 | 5.1:-64399952 | None:intergenic |
| GGATAACAGATCCAAAGAGA+AGG | 0.614630 | 5.1:-64397499 | None:intergenic |
| TCCAGCTCATAGCTTGTGCA+AGG | 0.620806 | 5.1:+64397519 | MS.gene56662:CDS |
| CATATACCAAGCTGTGTATG+TGG | 0.628165 | 5.1:-64397785 | None:intergenic |
| GCATCGCGCCAGCCATTACG+AGG | 0.641519 | 5.1:-64400024 | None:intergenic |
| GGGAAATCATGCATGCAATG+TGG | 0.656972 | 5.1:+64399866 | MS.gene56662:intron |
| CTGTGTATGTGGTCATGCCA+AGG | 0.659788 | 5.1:-64397774 | None:intergenic |
| GGCACTAGCAAGGTTACCTG+TGG | 0.663857 | 5.1:+64400440 | MS.gene56662:CDS |
| TTCTCCCATACAAAGTACAA+TGG | 0.665968 | 5.1:-64400378 | None:intergenic |
| TGGTGTACAAGCAAATCCAA+AGG | 0.675091 | 5.1:-64400358 | None:intergenic |
| ATTTACCTGGCCATGAACAA+TGG | 0.687542 | 5.1:-64397818 | None:intergenic |
| ACAATGTTATCAGAGAAACA+AGG | 0.767084 | 5.1:+64396516 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTAATTTAATTTT+TGG | + | chr5.1:64396943-64396962 | MS.gene56662:intron | 0.0% |
| !! | AAATTAGATTAAAAAAGATT+TGG | - | chr5.1:64398486-64398505 | None:intergenic | 10.0% |
| !! | ATTTGAATGATTTATAAAAT+TGG | - | chr5.1:64401479-64401498 | None:intergenic | 10.0% |
| !! | TATGGTTTAATTAATTTAAT+CGG | - | chr5.1:64398236-64398255 | None:intergenic | 10.0% |
| !!! | ATATTTTTTTCTTATATTTG+TGG | - | chr5.1:64397183-64397202 | None:intergenic | 10.0% |
| !!! | TATTTTTTTCTTATATTTGT+GGG | - | chr5.1:64397182-64397201 | None:intergenic | 10.0% |
| !!! | TTATTTATTTTATAAATCCA+TGG | - | chr5.1:64399323-64399342 | None:intergenic | 10.0% |
| !! | AAAAACATGTTGAAATATTT+CGG | - | chr5.1:64399645-64399664 | None:intergenic | 15.0% |
| !! | AATTTACATTTAAATAAAGC+AGG | - | chr5.1:64400327-64400346 | None:intergenic | 15.0% |
| !! | ATTTGACTAAAAAACAAAAT+AGG | + | chr5.1:64399456-64399475 | MS.gene56662:intron | 15.0% |
| !! | ATTTGTTTATTAGTTATCTA+GGG | + | chr5.1:64398884-64398903 | MS.gene56662:intron | 15.0% |
| !! | TATTTGTTTATTAGTTATCT+AGG | + | chr5.1:64398883-64398902 | MS.gene56662:intron | 15.0% |
| !! | TGATTAAATTAAAGTTTAAC+AGG | + | chr5.1:64398147-64398166 | MS.gene56662:intron | 15.0% |
| !! | TTAAAACAATTAGAATCAAA+GGG | - | chr5.1:64400106-64400125 | None:intergenic | 15.0% |
| !! | TTTGACTAAAAAACAAAATA+GGG | + | chr5.1:64399457-64399476 | MS.gene56662:intron | 15.0% |
| !!! | AATCAAAATAAGGTTAATTT+TGG | - | chr5.1:64399035-64399054 | None:intergenic | 15.0% |
| !!! | ACAATATATTTTCTATACTA+TGG | + | chr5.1:64398600-64398619 | MS.gene56662:intron | 15.0% |
| !!! | AGTATATATTTTAACCTTTT+AGG | + | chr5.1:64399421-64399440 | MS.gene56662:intron | 15.0% |
| !!! | ATTTTTTTCTTATATTTGTG+GGG | - | chr5.1:64397181-64397200 | None:intergenic | 15.0% |
| !!! | CAAAATTTTAAAATAATCTC+CGG | - | chr5.1:64400215-64400234 | None:intergenic | 15.0% |
| !!! | CAATTGTTTTAATCAAAATA+AGG | - | chr5.1:64399045-64399064 | None:intergenic | 15.0% |
| !!! | CTTATTTTGATTAAAACAAT+TGG | + | chr5.1:64399043-64399062 | MS.gene56662:intron | 15.0% |
| !!! | GTATATATTTTAACCTTTTA+GGG | + | chr5.1:64399422-64399441 | MS.gene56662:intron | 15.0% |
| !!! | TTTAAAACAATTAGAATCAA+AGG | - | chr5.1:64400107-64400126 | None:intergenic | 15.0% |
| !!! | TTTTGTTTAAATAAAAACCA+TGG | + | chr5.1:64398341-64398360 | MS.gene56662:intron | 15.0% |
| !! | ACTAATAATGAGAATATGTT+AGG | - | chr5.1:64401692-64401711 | None:intergenic | 20.0% |
| !! | ATTTATACTGCCATTAATAT+AGG | - | chr5.1:64401446-64401465 | None:intergenic | 20.0% |
| !! | CAAAAATATAAATATGAACC+TGG | - | chr5.1:64400074-64400093 | None:intergenic | 20.0% |
| !! | GAATGATTTATAAAATTGGT+GGG | - | chr5.1:64401475-64401494 | None:intergenic | 20.0% |
| !! | GTGTTATAAATGATAACAAA+AGG | + | chr5.1:64399080-64399099 | MS.gene56662:intron | 20.0% |
| !! | TAAAACAATTAGAATCAAAG+GGG | - | chr5.1:64400105-64400124 | None:intergenic | 20.0% |
| !! | TACAAAAAGTTAAACCAAAT+TGG | - | chr5.1:64400726-64400745 | None:intergenic | 20.0% |
| !! | TGAATGATTTATAAAATTGG+TGG | - | chr5.1:64401476-64401495 | None:intergenic | 20.0% |
| !! | TTAGATTAAAAAAGATTTGG+TGG | - | chr5.1:64398483-64398502 | None:intergenic | 20.0% |
| !! | TTTGATATCTCAAAATATTG+TGG | + | chr5.1:64397257-64397276 | MS.gene56662:intron | 20.0% |
| !! | TTTGTTTATTAGTTATCTAG+GGG | + | chr5.1:64398885-64398904 | MS.gene56662:intron | 20.0% |
| !!! | ATATGCCTCAAATTTAAAAT+AGG | - | chr5.1:64399542-64399561 | None:intergenic | 20.0% |
| !!! | ATATTTTTTACATATGCACT+TGG | + | chr5.1:64399237-64399256 | MS.gene56662:intron | 20.0% |
| !!! | ATTTCATTACCATTTTAAAG+TGG | - | chr5.1:64398998-64399017 | None:intergenic | 20.0% |
| !!! | GAAAACCTATTTTAAATTTG+AGG | + | chr5.1:64399534-64399553 | MS.gene56662:intron | 20.0% |
| !!! | GAAATATTTCAACATGTTTT+TGG | + | chr5.1:64399644-64399663 | MS.gene56662:intron | 20.0% |
| !!! | GTATTTGATTTTTAGCTAAA+AGG | + | chr5.1:64400773-64400792 | MS.gene56662:intron | 20.0% |
| !!! | TGTAGAATTTTAGTCAAATA+TGG | + | chr5.1:64401805-64401824 | MS.gene56662:intron | 20.0% |
| !!! | TTTATGATACATGATTAGTT+TGG | + | chr5.1:64401505-64401524 | MS.gene56662:intron | 20.0% |
| !!! | TTTATTTTCATTTTGTTCAG+TGG | + | chr5.1:64397408-64397427 | MS.gene56662:intron | 20.0% |
| ! | AAAACAATTAGAATCAAAGG+GGG | - | chr5.1:64400104-64400123 | None:intergenic | 25.0% |
| ! | AAAAGCAGAGCATATATTTA+TGG | + | chr5.1:64399774-64399793 | MS.gene56662:intron | 25.0% |
| ! | AAAAGTTCTCATATGTTTGT+TGG | - | chr5.1:64400132-64400151 | None:intergenic | 25.0% |
| ! | AAAGCAGAGCATATATTTAT+GGG | + | chr5.1:64399775-64399794 | MS.gene56662:intron | 25.0% |
| ! | AAATTGAATTTCAACAAGTG+GGG | + | chr5.1:64398273-64398292 | MS.gene56662:intron | 25.0% |
| ! | AAGGAAACCATTACAAATTT+AGG | + | chr5.1:64400792-64400811 | MS.gene56662:intron | 25.0% |
| ! | AATTATCAAATATTGATGCG+CGG | - | chr5.1:64400854-64400873 | None:intergenic | 25.0% |
| ! | AATTTAGTCCCTAAAATTGT+AGG | + | chr5.1:64397873-64397892 | MS.gene56662:intron | 25.0% |
| ! | ACAAACATACTCTATACTTT+CGG | + | chr5.1:64398434-64398453 | MS.gene56662:CDS | 25.0% |
| ! | AGTAAAATCTCAGTATGTAT+TGG | - | chr5.1:64400661-64400680 | None:intergenic | 25.0% |
| ! | ATAAGAAGTCCTCATTAAAA+TGG | - | chr5.1:64398641-64398660 | None:intergenic | 25.0% |
| ! | ATACTACATAAATGATCACT+TGG | + | chr5.1:64397657-64397676 | MS.gene56662:CDS | 25.0% |
| ! | ATTAAAACAATTGGAAATGC+AGG | + | chr5.1:64399052-64399071 | MS.gene56662:intron | 25.0% |
| ! | ATTAAGAGAAGTTTATTGCA+CGG | + | chr5.1:64398577-64398596 | MS.gene56662:intron | 25.0% |
| ! | ATTATAGCCAAAAACCATAT+TGG | - | chr5.1:64400471-64400490 | None:intergenic | 25.0% |
| ! | CAAATTGAATTTCAACAAGT+GGG | + | chr5.1:64398272-64398291 | MS.gene56662:intron | 25.0% |
| ! | CATAACCATCAACAAATTTA+TGG | - | chr5.1:64401208-64401227 | None:intergenic | 25.0% |
| ! | GGCATATTAGTAAAAATAGT+AGG | + | chr5.1:64399555-64399574 | MS.gene56662:intron | 25.0% |
| ! | GTATGTATTGGATATGTTAT+AGG | - | chr5.1:64400649-64400668 | None:intergenic | 25.0% |
| ! | TAAGACAAAACAGTAAAATC+TGG | + | chr5.1:64398662-64398681 | MS.gene56662:intron | 25.0% |
| ! | TACTAAACAGACCTATAAAA+AGG | - | chr5.1:64401837-64401856 | None:intergenic | 25.0% |
| ! | TCAAATTGAATTTCAACAAG+TGG | + | chr5.1:64398271-64398290 | MS.gene56662:intron | 25.0% |
| ! | TTGGCATTGTTTAGAAAAAT+CGG | - | chr5.1:64401986-64402005 | None:intergenic | 25.0% |
| !! | AAATACCAAACCATTTTGTT+TGG | - | chr5.1:64398404-64398423 | None:intergenic | 25.0% |
| !! | ATTGTTTGAAACTTCAACAA+CGG | + | chr5.1:64400871-64400890 | MS.gene56662:intron | 25.0% |
| !! | TCAATTTGAATGAGACTTTT+AGG | - | chr5.1:64398260-64398279 | None:intergenic | 25.0% |
| !!! | AACTAGTTGATGCTAATTTT+TGG | - | chr5.1:64398083-64398102 | None:intergenic | 25.0% |
| !!! | AATACCAAACCATTTTGTTT+GGG | - | chr5.1:64398403-64398422 | None:intergenic | 25.0% |
| !!! | ATATTTCAACATGTTTTTGG+AGG | + | chr5.1:64399647-64399666 | MS.gene56662:intron | 25.0% |
| !!! | CATAAATTTGTTGATGGTTA+TGG | + | chr5.1:64401206-64401225 | MS.gene56662:intron | 25.0% |
| !!! | CTTTAAAATATGAACTGCAT+AGG | + | chr5.1:64399697-64399716 | MS.gene56662:intron | 25.0% |
| !!! | CTTTTAGAAGTAGAAGTTTA+TGG | + | chr5.1:64400903-64400922 | MS.gene56662:intron | 25.0% |
| !!! | GTATTTTTTTACCTGATTTG+AGG | - | chr5.1:64396685-64396704 | None:intergenic | 25.0% |
| !!! | TGGATTTGATAACATGTTTT+TGG | + | chr5.1:64397608-64397627 | MS.gene56662:intron | 25.0% |
| !!! | TTTTAAAATAATCTCCGGAA+TGG | - | chr5.1:64400210-64400229 | None:intergenic | 25.0% |
| AAACAATTAGAATCAAAGGG+GGG | - | chr5.1:64400103-64400122 | None:intergenic | 30.0% | |
| AAATTGCAGTTTATCACCTT+TGG | + | chr5.1:64400342-64400361 | MS.gene56662:intron | 30.0% | |
| AACCATAACAATTGAGGTAA+TGG | + | chr5.1:64401764-64401783 | MS.gene56662:intron | 30.0% | |
| AACCATCAACAAATTTATGG+TGG | - | chr5.1:64401205-64401224 | None:intergenic | 30.0% | |
| AACCGAATCAAATCGAATAT+TGG | - | chr5.1:64402005-64402024 | None:intergenic | 30.0% | |
| AAGACCAAATCCTATAGTTA+TGG | - | chr5.1:64397747-64397766 | None:intergenic | 30.0% | |
| AATAGAGAAGTTTCCCAATA+AGG | - | chr5.1:64399380-64399399 | None:intergenic | 30.0% | |
| AATCCAATTGCTTTCCAATA+AGG | - | chr5.1:64397461-64397480 | None:intergenic | 30.0% | |
| AATTAAATAATTGTCCACCC+TGG | + | chr5.1:64401149-64401168 | MS.gene56662:intron | 30.0% | |
| ACCATCAACAAATTTATGGT+GGG | - | chr5.1:64401204-64401223 | None:intergenic | 30.0% | |
| ACCATGTGACTATTATTACA+GGG | + | chr5.1:64399846-64399865 | MS.gene56662:intron | 30.0% | |
| ACTATGAGTTTCTACTTCAA+AGG | + | chr5.1:64401092-64401111 | MS.gene56662:intron | 30.0% | |
| ACTTCAAACCATAACAATTG+AGG | + | chr5.1:64401758-64401777 | MS.gene56662:intron | 30.0% | |
| ATAACTGAATGACAAAGAAG+TGG | - | chr5.1:64401533-64401552 | None:intergenic | 30.0% | |
| ATCATATTCCAAGTCTTCTA+TGG | + | chr5.1:64397041-64397060 | MS.gene56662:CDS | 30.0% | |
| ATCCTATAGTTATGGAATGA+AGG | - | chr5.1:64397739-64397758 | None:intergenic | 30.0% | |
| ATGCATTGTATTACCCTAAA+AGG | - | chr5.1:64399438-64399457 | None:intergenic | 30.0% | |
| CATTCCATAACTATAGGATT+TGG | + | chr5.1:64397740-64397759 | MS.gene56662:CDS | 30.0% | |
| CATTGTTTAGAAAAATCGGA+CGG | - | chr5.1:64401982-64402001 | None:intergenic | 30.0% | |
| CTATGAGTTTCTACTTCAAA+GGG | + | chr5.1:64401093-64401112 | MS.gene56662:intron | 30.0% | |
| CTTCAAAAATCATGTCATTC+AGG | + | chr5.1:64397145-64397164 | MS.gene56662:CDS | 30.0% | |
| GAAAACAATTCCAACTCATT+TGG | + | chr5.1:64399494-64399513 | MS.gene56662:intron | 30.0% | |
| GAAGTGACTTCCTATATTAA+TGG | + | chr5.1:64401433-64401452 | MS.gene56662:intron | 30.0% | |
| GTAAAAATAGTAGGAATGTG+AGG | + | chr5.1:64399564-64399583 | MS.gene56662:intron | 30.0% | |
| TACACCATTGTACTTTGTAT+GGG | + | chr5.1:64400374-64400393 | MS.gene56662:CDS | 30.0% | |
| TACCTTCATTCCATAACTAT+AGG | + | chr5.1:64397734-64397753 | MS.gene56662:CDS | 30.0% | |
| TATGAGTTTCTACTTCAAAG+GGG | + | chr5.1:64401094-64401113 | MS.gene56662:intron | 30.0% | |
| TATTGGGAAACTTCTCTATT+AGG | + | chr5.1:64399380-64399399 | MS.gene56662:intron | 30.0% | |
| TCAAGACATATGTATTTACC+TGG | - | chr5.1:64397834-64397853 | None:intergenic | 30.0% | |
| TGAAAGACGATATTGAATTG+TGG | + | chr5.1:64397588-64397607 | MS.gene56662:intron | 30.0% | |
| TGTGACTTAAATAGTACCAA+TGG | - | chr5.1:64401575-64401594 | None:intergenic | 30.0% | |
| TGTGATCGGATTTATTATAG+CGG | + | chr5.1:64397289-64397308 | MS.gene56662:intron | 30.0% | |
| TGTTTGAAGAAAGACATTGA+TGG | + | chr5.1:64397385-64397404 | MS.gene56662:intron | 30.0% | |
| TGTTTGAGTATACACTAACA+TGG | + | chr5.1:64399823-64399842 | MS.gene56662:intron | 30.0% | |
| TTATTGGAAAGCAATTGGAT+TGG | + | chr5.1:64397460-64397479 | MS.gene56662:CDS | 30.0% | |
| TTGTGAAATGCTTTGATATG+TGG | + | chr5.1:64400824-64400843 | MS.gene56662:intron | 30.0% | |
| TTTAGATTTCGATGCATGTT+TGG | + | chr5.1:64396710-64396729 | MS.gene56662:intron | 30.0% | |
| ! | ATCAAACAAGTTGACACATT+TGG | + | chr5.1:64402192-64402211 | MS.gene56662:CDS | 30.0% |
| ! | ATTCCACTCCTACAATTTTA+GGG | - | chr5.1:64397884-64397903 | None:intergenic | 30.0% |
| ! | CTGGTTTCAAGAATTTTCTA+TGG | + | chr5.1:64396622-64396641 | MS.gene56662:CDS | 30.0% |
| ! | GAAAGTATAGAGTATGTTTG+TGG | - | chr5.1:64398435-64398454 | None:intergenic | 30.0% |
| ! | GGTAATACCAATATGGTTTT+TGG | + | chr5.1:64400461-64400480 | MS.gene56662:CDS | 30.0% |
| ! | GTTAGGTTGTGTTAAAATGT+GGG | - | chr5.1:64401601-64401620 | None:intergenic | 30.0% |
| ! | TATTCCACTCCTACAATTTT+AGG | - | chr5.1:64397885-64397904 | None:intergenic | 30.0% |
| ! | TGCCAATATTCGATTTGATT+CGG | + | chr5.1:64402000-64402019 | MS.gene56662:intron | 30.0% |
| ! | TGTTAGGTTGTGTTAAAATG+TGG | - | chr5.1:64401602-64401621 | None:intergenic | 30.0% |
| ! | TGTTTAAGGTATCATCTATG+AGG | + | chr5.1:64399264-64399283 | MS.gene56662:intron | 30.0% |
| ! | TTAGGTTGTGTTAAAATGTG+GGG | - | chr5.1:64401600-64401619 | None:intergenic | 30.0% |
| ! | TTCAAGAATTTTCTATGGCA+TGG | + | chr5.1:64396627-64396646 | MS.gene56662:CDS | 30.0% |
| !! | AAAATGGTTTGGTATTTCAC+TGG | + | chr5.1:64398407-64398426 | MS.gene56662:CDS | 30.0% |
| !! | ACACAAAGAGCATATTTTTG+AGG | + | chr5.1:64400418-64400437 | MS.gene56662:CDS | 30.0% |
| !! | ATTTGTTGATGGTTATGGAA+AGG | + | chr5.1:64401211-64401230 | MS.gene56662:intron | 30.0% |
| !! | ATTTTTGCAGGTTGAAAATG+TGG | + | chr5.1:64398367-64398386 | MS.gene56662:intron | 30.0% |
| !! | CACAAAGAGCATATTTTTGA+GGG | + | chr5.1:64400419-64400438 | MS.gene56662:CDS | 30.0% |
| !! | CATTGTTTGCCACTTTAAAA+TGG | + | chr5.1:64398986-64399005 | MS.gene56662:intron | 30.0% |
| !! | TATGGTTGATGCCTTTTTAT+AGG | + | chr5.1:64401823-64401842 | MS.gene56662:intron | 30.0% |
| !! | TCATTTTAGTACATGTGAGT+TGG | - | chr5.1:64397966-64397985 | None:intergenic | 30.0% |
| !! | TGTCAATCGTAGTTGATTTT+GGG | - | chr5.1:64401902-64401921 | None:intergenic | 30.0% |
| !!! | ACATGTTTTTGGAGGTTTTA+CGG | + | chr5.1:64399655-64399674 | MS.gene56662:intron | 30.0% |
| !!! | AGTTTTGAGACACATATGTT+TGG | - | chr5.1:64400994-64401013 | None:intergenic | 30.0% |
| !!! | ATTTTTTGGTTAAGGAAGTG+GGG | + | chr5.1:64398299-64398318 | MS.gene56662:intron | 30.0% |
| !!! | CATTTTTTGGTTAAGGAAGT+GGG | + | chr5.1:64398298-64398317 | MS.gene56662:intron | 30.0% |
| !!! | GATGCTAATTTTTGGTTCAA+CGG | - | chr5.1:64398075-64398094 | None:intergenic | 30.0% |
| !!! | TCACTATTTTGACATGTTGT+AGG | + | chr5.1:64400699-64400718 | MS.gene56662:intron | 30.0% |
| !!! | TGAATGAGACTTTTAGGTTA+TGG | - | chr5.1:64398254-64398273 | None:intergenic | 30.0% |
| AAAATCATGTCATTCAGGTG+AGG | + | chr5.1:64397150-64397169 | MS.gene56662:intron | 35.0% | |
| AAACAATTGGAAATGCAGGA+TGG | + | chr5.1:64399056-64399075 | MS.gene56662:intron | 35.0% | |
| AAATCACTTTCTTAGCCGTA+AGG | + | chr5.1:64401060-64401079 | MS.gene56662:intron | 35.0% | |
| AAATTAGTACACACATCGTG+AGG | - | chr5.1:64398825-64398844 | None:intergenic | 35.0% | |
| AAATTCTTGAAACCAGAAGC+AGG | - | chr5.1:64396618-64396637 | None:intergenic | 35.0% | |
| AACAATTAGAATCAAAGGGG+GGG | - | chr5.1:64400102-64400121 | None:intergenic | 35.0% | |
| AACATACTCTATACTTTCGG+CGG | + | chr5.1:64398437-64398456 | MS.gene56662:CDS | 35.0% | |
| AACCATATTGGTATTACCAC+AGG | - | chr5.1:64400459-64400478 | None:intergenic | 35.0% | |
| AAGGTTTACTTGGTCCTTAT+TGG | + | chr5.1:64397444-64397463 | MS.gene56662:CDS | 35.0% | |
| ACATACATTAATGTCCAGCT+TGG | - | chr5.1:64402096-64402115 | None:intergenic | 35.0% | |
| ACCATATTGATAGATAGTCC+AGG | - | chr5.1:64401170-64401189 | None:intergenic | 35.0% | |
| AGAAGTCCTCATTAAAATGG+AGG | - | chr5.1:64398638-64398657 | None:intergenic | 35.0% | |
| AGTTAATGGGACCAAAGAAA+GGG | - | chr5.1:64400497-64400516 | None:intergenic | 35.0% | |
| ATCAACTACGATTGACAGTT+TGG | + | chr5.1:64401905-64401924 | MS.gene56662:intron | 35.0% | |
| ATCTGCAATTGCTGTCTATT+GGG | + | chr5.1:64399954-64399973 | MS.gene56662:CDS | 35.0% | |
| ATGATGAGACTGATTGGATA+TGG | - | chr5.1:64396860-64396879 | None:intergenic | 35.0% | |
| ATGGTTATGGAAAGGTTAGA+TGG | + | chr5.1:64401219-64401238 | MS.gene56662:intron | 35.0% | |
| CAAACGAATTATATGCTGCT+TGG | + | chr5.1:64401411-64401430 | MS.gene56662:intron | 35.0% | |
| CAGTGAGTTTAACGAAATCA+CGG | - | chr5.1:64396832-64396851 | None:intergenic | 35.0% | |
| CATTGGAATGGTCTAAAAGT+TGG | - | chr5.1:64399990-64400009 | None:intergenic | 35.0% | |
| CCACTTCCTTAACCAAAAAA+TGG | - | chr5.1:64398300-64398319 | None:intergenic | 35.0% | |
| CCATATTGATAGATAGTCCA+GGG | - | chr5.1:64401169-64401188 | None:intergenic | 35.0% | |
| CGGTTCAACTATGATTGAAT+CGG | - | chr5.1:64398216-64398235 | None:intergenic | 35.0% | |
| CTATAGTCGTATAGTACCAT+TGG | + | chr5.1:64401556-64401575 | MS.gene56662:intron | 35.0% | |
| GACCATGTGACTATTATTAC+AGG | + | chr5.1:64399845-64399864 | MS.gene56662:intron | 35.0% | |
| GACCATTACCTCAATTGTTA+TGG | - | chr5.1:64401769-64401788 | None:intergenic | 35.0% | |
| GATCATAGTTCAATGTGGTT+CGG | + | chr5.1:64401946-64401965 | MS.gene56662:intron | 35.0% | |
| GCATCAACTAGTTCATTAGT+TGG | + | chr5.1:64398090-64398109 | MS.gene56662:intron | 35.0% | |
| GCTATAATCTTCCCTTTCTT+TGG | + | chr5.1:64400483-64400502 | MS.gene56662:CDS | 35.0% | |
| GGTATCATCTATGAGGAAAT+TGG | + | chr5.1:64399271-64399290 | MS.gene56662:intron | 35.0% | |
| GGTTGAAAATGTGGTTCATT+CGG | + | chr5.1:64398376-64398395 | MS.gene56662:intron | 35.0% | |
| GTACACCATTGTACTTTGTA+TGG | + | chr5.1:64400373-64400392 | MS.gene56662:CDS | 35.0% | |
| GTGAGGTAAAATGTCTCTTA+GGG | - | chr5.1:64398808-64398827 | None:intergenic | 35.0% | |
| GTTGAAAATGTGGTTCATTC+GGG | + | chr5.1:64398377-64398396 | MS.gene56662:CDS | 35.0% | |
| TAAATGATCACTTGGACAAG+AGG | + | chr5.1:64397665-64397684 | MS.gene56662:CDS | 35.0% | |
| TACACTATTGTCTTGGCTAA+CGG | + | chr5.1:64398702-64398721 | MS.gene56662:intron | 35.0% | |
| TACCTGTGGTAATACCAATA+TGG | + | chr5.1:64400454-64400473 | MS.gene56662:CDS | 35.0% | |
| TAGGAAAAGAGACAAAGATG+TGG | - | chr5.1:64400630-64400649 | None:intergenic | 35.0% | |
| TATCCAATCAGTCTCATCAT+TGG | + | chr5.1:64396860-64396879 | MS.gene56662:intron | 35.0% | |
| TCATAGGATGGGAAAAGTAA+TGG | - | chr5.1:64399590-64399609 | None:intergenic | 35.0% | |
| TCCCTGTAATAATAGTCACA+TGG | - | chr5.1:64399850-64399869 | None:intergenic | 35.0% | |
| TCTCAACTGTTACGATAAGA+AGG | - | chr5.1:64400930-64400949 | None:intergenic | 35.0% | |
| TCTTATCGTAACAGTTGAGA+CGG | + | chr5.1:64400930-64400949 | MS.gene56662:intron | 35.0% | |
| TGAGGTAAAATGTCTCTTAG+GGG | - | chr5.1:64398807-64398826 | None:intergenic | 35.0% | |
| TGGTTATGGAAAGGTTAGAT+GGG | + | chr5.1:64401220-64401239 | MS.gene56662:intron | 35.0% | |
| TGTGATATGTCCAAATGAGT+TGG | - | chr5.1:64399507-64399526 | None:intergenic | 35.0% | |
| TTACGGCTAAGAAAGTGATT+TGG | - | chr5.1:64401061-64401080 | None:intergenic | 35.0% | |
| TTCTCCCATACAAAGTACAA+TGG | - | chr5.1:64400381-64400400 | None:intergenic | 35.0% | |
| TTTCCCAATAAGGCAAAGAA+CGG | - | chr5.1:64399370-64399389 | None:intergenic | 35.0% | |
| TTTGTATGGGAGAAAGTGAT+AGG | + | chr5.1:64400387-64400406 | MS.gene56662:CDS | 35.0% | |
| ! | AAGAATTTTCTATGGCATGG+TGG | + | chr5.1:64396630-64396649 | MS.gene56662:CDS | 35.0% |
| ! | AGGACATGGACTTACATTTT+TGG | + | chr5.1:64397685-64397704 | MS.gene56662:CDS | 35.0% |
| ! | ATAGTTTGCAACTGCAATAG+CGG | - | chr5.1:64397341-64397360 | None:intergenic | 35.0% |
| ! | ATGCACTTGGTTCTTGTTTA+AGG | + | chr5.1:64399250-64399269 | MS.gene56662:intron | 35.0% |
| ! | CAAGTCTTCTATGGATTGAT+GGG | + | chr5.1:64397050-64397069 | MS.gene56662:CDS | 35.0% |
| ! | GTGATATGGGTTACTATTGT+AGG | + | chr5.1:64402132-64402151 | MS.gene56662:CDS | 35.0% |
| ! | TATAGGATTTGGTCTTTCCT+TGG | + | chr5.1:64397751-64397770 | MS.gene56662:CDS | 35.0% |
| !! | AAACCATGGTTCATTTTTGC+AGG | + | chr5.1:64398355-64398374 | MS.gene56662:intron | 35.0% |
| !! | ACACTTGAGTTGATAGTGTT+AGG | - | chr5.1:64401618-64401637 | None:intergenic | 35.0% |
| !! | ACCCACCATAAATTTGTTGA+TGG | + | chr5.1:64401200-64401219 | MS.gene56662:intron | 35.0% |
| !! | ACTATTGTAGGCTTTGGATT+TGG | + | chr5.1:64402144-64402163 | MS.gene56662:CDS | 35.0% |
| !! | ATTACTTTTCCCATCCTATG+AGG | + | chr5.1:64399589-64399608 | MS.gene56662:intron | 35.0% |
| !! | ATTCGTTTGCTGTACTACTA+CGG | - | chr5.1:64401400-64401419 | None:intergenic | 35.0% |
| !! | CAAATTTATGGTGGGTTCTA+CGG | - | chr5.1:64401196-64401215 | None:intergenic | 35.0% |
| !! | CTGTCAATCGTAGTTGATTT+TGG | - | chr5.1:64401903-64401922 | None:intergenic | 35.0% |
| !! | CTTTTGCCTCCATTTTAATG+AGG | + | chr5.1:64398629-64398648 | MS.gene56662:intron | 35.0% |
| !! | TAGATAGCTTTGAACTTCTG+AGG | - | chr5.1:64399895-64399914 | None:intergenic | 35.0% |
| !!! | CATGTTTTTGGAGGTTTTAC+GGG | + | chr5.1:64399656-64399675 | MS.gene56662:intron | 35.0% |
| !!! | CCATTTTTTGGTTAAGGAAG+TGG | + | chr5.1:64398297-64398316 | MS.gene56662:intron | 35.0% |
| !!! | CTTTGACTGTGACCTTTTTT+TGG | + | chr5.1:64396893-64396912 | MS.gene56662:intron | 35.0% |
| !!! | TTTTTGGTTTTGTGCTATGC+AGG | + | chr5.1:64396959-64396978 | MS.gene56662:intron | 35.0% |
| AAAACCGATTGAATCGACTG+TGG | - | chr5.1:64398188-64398207 | None:intergenic | 40.0% | |
| AAAACGTACGAGAACCTCAT+AGG | - | chr5.1:64399606-64399625 | None:intergenic | 40.0% | |
| AACTGCACTTTCCTTCTCTT+TGG | + | chr5.1:64397488-64397507 | MS.gene56662:CDS | 40.0% | |
| AATCTTGATGCTCATTCACC+AGG | + | chr5.1:64400053-64400072 | MS.gene56662:CDS | 40.0% | |
| ACATACTCTATACTTTCGGC+GGG | + | chr5.1:64398438-64398457 | MS.gene56662:CDS | 40.0% | |
| AGACAAAGATGTGGAGAGAT+TGG | - | chr5.1:64400621-64400640 | None:intergenic | 40.0% | |
| AGCCAAGACAATAGTGTAGT+GGG | - | chr5.1:64398700-64398719 | None:intergenic | 40.0% | |
| AGCTCAGATGATTCATGCAT+GGG | + | chr5.1:64399296-64399315 | MS.gene56662:intron | 40.0% | |
| AGTCCCTAAAATTGTAGGAG+TGG | + | chr5.1:64397878-64397897 | MS.gene56662:intron | 40.0% | |
| ATTTACCTGGCCATGAACAA+TGG | - | chr5.1:64397821-64397840 | None:intergenic | 40.0% | |
| CAACCTGCAAAAATGAACCA+TGG | - | chr5.1:64398361-64398380 | None:intergenic | 40.0% | |
| CAATAGACAGCAATTGCAGA+TGG | - | chr5.1:64399955-64399974 | None:intergenic | 40.0% | |
| CAATGCGTTTGTGGTGATAT+GGG | + | chr5.1:64402119-64402138 | MS.gene56662:CDS | 40.0% | |
| CATATACCAAGCTGTGTATG+TGG | - | chr5.1:64397788-64397807 | None:intergenic | 40.0% | |
| CATCTGCAATTGCTGTCTAT+TGG | + | chr5.1:64399953-64399972 | MS.gene56662:CDS | 40.0% | |
| CCATCAATCCATAGAAGACT+TGG | - | chr5.1:64397052-64397071 | None:intergenic | 40.0% | |
| CCCTGGACTATCTATCAATA+TGG | + | chr5.1:64401166-64401185 | MS.gene56662:intron | 40.0% | |
| CGTGAGGTAAAATGTCTCTT+AGG | - | chr5.1:64398809-64398828 | None:intergenic | 40.0% | |
| CTAGCGATCATAGTTCAATG+TGG | + | chr5.1:64401941-64401960 | MS.gene56662:intron | 40.0% | |
| CTCTTCCACACACCAAAAAA+AGG | - | chr5.1:64396908-64396927 | None:intergenic | 40.0% | |
| CTGCTCATATGCTCACTTAT+AGG | + | chr5.1:64400568-64400587 | MS.gene56662:CDS | 40.0% | |
| GAAGAAAGAGAGGAAGAGAA+AGG | + | chr5.1:64396585-64396604 | MS.gene56662:CDS | 40.0% | |
| GACATGTTGTAGGTCCAATT+TGG | + | chr5.1:64400709-64400728 | MS.gene56662:intron | 40.0% | |
| GAGGTAAAATGTCTCTTAGG+GGG | - | chr5.1:64398806-64398825 | None:intergenic | 40.0% | |
| GAGTTAATGGGACCAAAGAA+AGG | - | chr5.1:64400498-64400517 | None:intergenic | 40.0% | |
| GGATAACAGATCCAAAGAGA+AGG | - | chr5.1:64397502-64397521 | None:intergenic | 40.0% | |
| GGTCCTTATTGGAAAGCAAT+TGG | + | chr5.1:64397455-64397474 | MS.gene56662:CDS | 40.0% | |
| GTATGTGATCAATGCGTTTG+TGG | + | chr5.1:64402110-64402129 | MS.gene56662:CDS | 40.0% | |
| GTCCAGCTTGGAATAACTTT+GGG | - | chr5.1:64402084-64402103 | None:intergenic | 40.0% | |
| GTTCCAATGATGAGACTGAT+TGG | - | chr5.1:64396866-64396885 | None:intergenic | 40.0% | |
| TAAAATGTCTCTTAGGGGGA+AGG | - | chr5.1:64398802-64398821 | None:intergenic | 40.0% | |
| TACACCGTTCTTTGCCTTAT+TGG | + | chr5.1:64399363-64399382 | MS.gene56662:intron | 40.0% | |
| TAGCCAAGACAATAGTGTAG+TGG | - | chr5.1:64398701-64398720 | None:intergenic | 40.0% | |
| TATGATCGCTAGTGCACAAA+CGG | - | chr5.1:64401933-64401952 | None:intergenic | 40.0% | |
| TATTGATAGATAGTCCAGGG+TGG | - | chr5.1:64401166-64401185 | None:intergenic | 40.0% | |
| TCAATGCGTTTGTGGTGATA+TGG | + | chr5.1:64402118-64402137 | MS.gene56662:CDS | 40.0% | |
| TCCGGAATGGAAAATACTTG+AGG | - | chr5.1:64400197-64400216 | None:intergenic | 40.0% | |
| TCTCAGCTAGGAATGATTTC+AGG | + | chr5.1:64397017-64397036 | MS.gene56662:CDS | 40.0% | |
| TGAGCTGAATGAAGAAAGAG+AGG | + | chr5.1:64396575-64396594 | MS.gene56662:CDS | 40.0% | |
| TGCATGATCATATCGTAGTC+TGG | + | chr5.1:64398117-64398136 | MS.gene56662:intron | 40.0% | |
| TGGGTTACTATTGTAGGCTT+TGG | + | chr5.1:64402138-64402157 | MS.gene56662:CDS | 40.0% | |
| TGGTGTACAAGCAAATCCAA+AGG | - | chr5.1:64400361-64400380 | None:intergenic | 40.0% | |
| TGTCCAGCTTGGAATAACTT+TGG | - | chr5.1:64402085-64402104 | None:intergenic | 40.0% | |
| TGTGGTCAAATCGATGTGAT+CGG | + | chr5.1:64397275-64397294 | MS.gene56662:intron | 40.0% | |
| TGTTGAGTACAGAAGCAGAA+AGG | + | chr5.1:64397106-64397125 | MS.gene56662:CDS | 40.0% | |
| TTCTCTCTTCTTCCTCGTAA+TGG | + | chr5.1:64400012-64400031 | MS.gene56662:CDS | 40.0% | |
| ! | ACACCGTTCTTTGCCTTATT+GGG | + | chr5.1:64399364-64399383 | MS.gene56662:intron | 40.0% |
| ! | AGGAAGAAGAGAGAAAGCAT+TGG | - | chr5.1:64400007-64400026 | None:intergenic | 40.0% |
| ! | CCAAGTCTTCTATGGATTGA+TGG | + | chr5.1:64397049-64397068 | MS.gene56662:CDS | 40.0% |
| ! | GCCTCAAGTATTTTCCATTC+CGG | + | chr5.1:64400193-64400212 | MS.gene56662:intron | 40.0% |
| ! | GTCTAAAAGTTGGTCACCAA+AGG | - | chr5.1:64399980-64399999 | None:intergenic | 40.0% |
| ! | GTGGTTCTGTTTATGATGCT+TGG | + | chr5.1:64396649-64396668 | MS.gene56662:CDS | 40.0% |
| ! | TACGGGATTTTTACGCAGTT+CGG | + | chr5.1:64399673-64399692 | MS.gene56662:intron | 40.0% |
| ! | TCAACCACAGTCGATTCAAT+CGG | + | chr5.1:64398181-64398200 | MS.gene56662:intron | 40.0% |
| ! | TCTATGGATTGATGGGTAGT+TGG | + | chr5.1:64397057-64397076 | MS.gene56662:CDS | 40.0% |
| ! | TGATCACTGAGTACTGTGTA+AGG | - | chr5.1:64401641-64401660 | None:intergenic | 40.0% |
| ! | TGTTCAGTGGTTTGAAGTGT+TGG | + | chr5.1:64397421-64397440 | MS.gene56662:intron | 40.0% |
| !! | ATCGTAGTTGATTTTGGGCA+CGG | - | chr5.1:64401897-64401916 | None:intergenic | 40.0% |
| !! | ATTGTAGGCTTTGGATTTGG+AGG | + | chr5.1:64402147-64402166 | MS.gene56662:CDS | 40.0% |
| !! | GAACTGGTTCGACTAAAACA+TGG | + | chr5.1:64400964-64400983 | MS.gene56662:intron | 40.0% |
| !! | GAAGAGAGAAAGCATTGGAA+TGG | - | chr5.1:64400002-64400021 | None:intergenic | 40.0% |
| !! | GAAGTGTTGGAAGGTTTACT+TGG | + | chr5.1:64397434-64397453 | MS.gene56662:CDS | 40.0% |
| !! | GCTAAGAAAGTGATTTGGTC+GGG | - | chr5.1:64401056-64401075 | None:intergenic | 40.0% |
| !! | GGCTAAGAAAGTGATTTGGT+CGG | - | chr5.1:64401057-64401076 | None:intergenic | 40.0% |
| !! | TAGTTCAATGTGGTTCGGTT+TGG | + | chr5.1:64401951-64401970 | MS.gene56662:intron | 40.0% |
| !! | TCAACGGATTGAATTGTGCT+CGG | - | chr5.1:64398059-64398078 | None:intergenic | 40.0% |
| !! | TTGTAGGCTTTGGATTTGGA+GGG | + | chr5.1:64402148-64402167 | MS.gene56662:CDS | 40.0% |
| !!! | AACAAGTGGGGTCCATTTTT+TGG | + | chr5.1:64398285-64398304 | MS.gene56662:intron | 40.0% |
| !!! | TATTTTTGAGGGCACTAGCA+AGG | + | chr5.1:64400430-64400449 | MS.gene56662:CDS | 40.0% |
| !!! | TGGGGTCCATTTTTTGGTTA+AGG | + | chr5.1:64398291-64398310 | MS.gene56662:intron | 40.0% |
| !!! | TGTGACCTTTTTTTGGTGTG+TGG | + | chr5.1:64396900-64396919 | MS.gene56662:intron | 40.0% |
| ACCATTGCAGCCATTGTTCA+TGG | + | chr5.1:64397808-64397827 | MS.gene56662:CDS | 45.0% | |
| AGACAGCAATTGCAGATGGT+AGG | - | chr5.1:64399951-64399970 | None:intergenic | 45.0% | |
| ATCACTTGGACAAGAGGACA+TGG | + | chr5.1:64397671-64397690 | MS.gene56662:CDS | 45.0% | |
| ATGATTCATGCATGGGACCA+TGG | + | chr5.1:64399303-64399322 | MS.gene56662:intron | 45.0% | |
| ATTGCTGTCTATTGGGCCTT+TGG | + | chr5.1:64399961-64399980 | MS.gene56662:CDS | 45.0% | |
| CACCCACTACACTATTGTCT+TGG | + | chr5.1:64398695-64398714 | MS.gene56662:intron | 45.0% | |
| CAGCTCAGATGATTCATGCA+TGG | + | chr5.1:64399295-64399314 | MS.gene56662:intron | 45.0% | |
| CAGTGAAATCAGCAGGATCA+CGG | + | chr5.1:64396738-64396757 | MS.gene56662:intron | 45.0% | |
| CATAAAAAGTCTCGCGGTCA+CGG | + | chr5.1:64397315-64397334 | MS.gene56662:intron | 45.0% | |
| CCATACTCATTCTCTCAGCT+AGG | + | chr5.1:64397005-64397024 | MS.gene56662:CDS | 45.0% | |
| CCTAGCTGAGAGAATGAGTA+TGG | - | chr5.1:64397008-64397027 | None:intergenic | 45.0% | |
| CGGAGACATAAAAAGTCTCG+CGG | + | chr5.1:64397309-64397328 | MS.gene56662:intron | 45.0% | |
| GAAAGAGAGGAAGAGAAAGG+AGG | + | chr5.1:64396588-64396607 | MS.gene56662:CDS | 45.0% | |
| GACAGCAATTGCAGATGGTA+GGG | - | chr5.1:64399950-64399969 | None:intergenic | 45.0% | |
| GGATTCACAGTGAAATCAGC+AGG | + | chr5.1:64396731-64396750 | MS.gene56662:intron | 45.0% | |
| GGGAAATCATGCATGCAATG+TGG | + | chr5.1:64399866-64399885 | MS.gene56662:intron | 45.0% | |
| GTACGAGAACCTCATAGGAT+GGG | - | chr5.1:64399601-64399620 | None:intergenic | 45.0% | |
| GTCCCATTAACTCAGCTGTA+GGG | + | chr5.1:64400505-64400524 | MS.gene56662:CDS | 45.0% | |
| GTTTAGCTGTGCCTCAAATC+AGG | + | chr5.1:64396671-64396690 | MS.gene56662:CDS | 45.0% | |
| TCAGTGATGCATTGTGTGGT+TGG | - | chr5.1:64402262-64402281 | None:intergenic | 45.0% | |
| TCATTCGGGCCCAAACAAAA+TGG | + | chr5.1:64398391-64398410 | MS.gene56662:CDS | 45.0% | |
| TCCCATTAACTCAGCTGTAG+GGG | + | chr5.1:64400506-64400525 | MS.gene56662:CDS | 45.0% | |
| TGAGCATATGAGCAGAAGCA+GGG | - | chr5.1:64400563-64400582 | None:intergenic | 45.0% | |
| TGCCCAAAGTTATTCCAAGC+TGG | + | chr5.1:64402079-64402098 | MS.gene56662:CDS | 45.0% | |
| TTAGAATCAAAGGGGGGGAA+TGG | - | chr5.1:64400097-64400116 | None:intergenic | 45.0% | |
| ! | ATTTGGTCTTTCCTTGGCCT+TGG | + | chr5.1:64397757-64397776 | MS.gene56662:CDS | 45.0% |
| ! | TGGTTGGAAGCTGGTAGTTT+TGG | - | chr5.1:64402246-64402265 | None:intergenic | 45.0% |
| !! | CAGTGGTTTGAAGTGTTGGA+AGG | + | chr5.1:64397425-64397444 | MS.gene56662:intron | 45.0% |
| !!! | CTGGTAGTTTTGGTGGACAT+TGG | - | chr5.1:64402236-64402255 | None:intergenic | 45.0% |
| !!! | TTGGAAGCTGGTAGTTTTGG+TGG | - | chr5.1:64402243-64402262 | None:intergenic | 45.0% |
| !!! | ACTATTTTTTTAAAAATTTT+AGG | + | chr5.1:64397356-64397375 | MS.gene56662:intron | 5.0% |
| AAAGGAGGAAGTCCTGCTTC+TGG | + | chr5.1:64396603-64396622 | MS.gene56662:CDS | 50.0% | |
| ACCTTGCACAAGCTATGAGC+TGG | - | chr5.1:64397523-64397542 | None:intergenic | 50.0% | |
| AGCCCCTACAGCTGAGTTAA+TGG | - | chr5.1:64400511-64400530 | None:intergenic | 50.0% | |
| AGGACGCGTGAGAAACACAT+AGG | + | chr5.1:64399717-64399736 | MS.gene56662:intron | 50.0% | |
| CATAGTCCTCCTCGTCCTTA+CGG | - | chr5.1:64401078-64401097 | None:intergenic | 50.0% | |
| CGGGCCCAAACAAAATGGTT+TGG | + | chr5.1:64398396-64398415 | MS.gene56662:CDS | 50.0% | |
| CGTACGAGAACCTCATAGGA+TGG | - | chr5.1:64399602-64399621 | None:intergenic | 50.0% | |
| CTCTTCTTCCTCGTAATGGC+TGG | + | chr5.1:64400016-64400035 | MS.gene56662:CDS | 50.0% | |
| CTGTGTATGTGGTCATGCCA+AGG | - | chr5.1:64397777-64397796 | None:intergenic | 50.0% | |
| CTTTCTTAGCCGTAAGGACG+AGG | + | chr5.1:64401066-64401085 | MS.gene56662:intron | 50.0% | |
| GAATCGACTGTGGTTGAACG+AGG | - | chr5.1:64398178-64398197 | None:intergenic | 50.0% | |
| GACGGTGACTTGATCAGAAC+TGG | + | chr5.1:64400948-64400967 | MS.gene56662:intron | 50.0% | |
| GCATGACCACATACACAGCT+TGG | + | chr5.1:64397779-64397798 | MS.gene56662:CDS | 50.0% | |
| GCCATGAACAATGGCTGCAA+TGG | - | chr5.1:64397812-64397831 | None:intergenic | 50.0% | |
| GCCCCTACAGCTGAGTTAAT+GGG | - | chr5.1:64400510-64400529 | None:intergenic | 50.0% | |
| GGACGCGTGAGAAACACATA+GGG | + | chr5.1:64399718-64399737 | MS.gene56662:intron | 50.0% | |
| GGTCCCATTAACTCAGCTGT+AGG | + | chr5.1:64400504-64400523 | MS.gene56662:CDS | 50.0% | |
| GTGAGCATATGAGCAGAAGC+AGG | - | chr5.1:64400564-64400583 | None:intergenic | 50.0% | |
| TAGGTCTGCTTCAGCAAGAC+AGG | + | chr5.1:64400587-64400606 | MS.gene56662:CDS | 50.0% | |
| TGCATTGTGTGGTTGGAAGC+TGG | - | chr5.1:64402255-64402274 | None:intergenic | 50.0% | |
| TTGTGCTATGCAGGTTGCTC+AGG | + | chr5.1:64396968-64396987 | MS.gene56662:intron | 50.0% | |
| ! | TCCAGCTCATAGCTTGTGCA+AGG | + | chr5.1:64397519-64397538 | MS.gene56662:CDS | 50.0% |
| !! | AGGCTTTGGATTTGGAGGGT+GGG | + | chr5.1:64402152-64402171 | MS.gene56662:CDS | 50.0% |
| !! | TAGGCTTTGGATTTGGAGGG+TGG | + | chr5.1:64402151-64402170 | MS.gene56662:CDS | 50.0% |
| ATGTGGTCATGCCAAGGCCA+AGG | - | chr5.1:64397771-64397790 | None:intergenic | 55.0% | |
| GGCACTAGCAAGGTTACCTG+TGG | + | chr5.1:64400440-64400459 | MS.gene56662:CDS | 55.0% | |
| TCTTAGCCGTAAGGACGAGG+AGG | + | chr5.1:64401069-64401088 | MS.gene56662:intron | 55.0% | |
| TGCAGCCATTGTTCATGGCC+AGG | + | chr5.1:64397813-64397832 | MS.gene56662:CDS | 55.0% | |
| ! | CTCAGCTGTAGGGGCTCTTT+TGG | + | chr5.1:64400515-64400534 | MS.gene56662:CDS | 55.0% |
| CGTAATGGCTGGCGCGATGC+TGG | + | chr5.1:64400027-64400046 | MS.gene56662:CDS | 65.0% | |
| GCATCGCGCCAGCCATTACG+AGG | - | chr5.1:64400027-64400046 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 64396519 | 64402281 | 64396519 | ID=MS.gene56662 |
| chr5.1 | mRNA | 64396519 | 64402281 | 64396519 | ID=MS.gene56662.t1;Parent=MS.gene56662 |
| chr5.1 | exon | 64396519 | 64396692 | 64396519 | ID=MS.gene56662.t1.exon1;Parent=MS.gene56662.t1 |
| chr5.1 | CDS | 64396519 | 64396692 | 64396519 | ID=cds.MS.gene56662.t1;Parent=MS.gene56662.t1 |
| chr5.1 | exon | 64396981 | 64397166 | 64396981 | ID=MS.gene56662.t1.exon2;Parent=MS.gene56662.t1 |
| chr5.1 | CDS | 64396981 | 64397166 | 64396981 | ID=cds.MS.gene56662.t1;Parent=MS.gene56662.t1 |
| chr5.1 | exon | 64397428 | 64397540 | 64397428 | ID=MS.gene56662.t1.exon3;Parent=MS.gene56662.t1 |
| chr5.1 | CDS | 64397428 | 64397540 | 64397428 | ID=cds.MS.gene56662.t1;Parent=MS.gene56662.t1 |
| chr5.1 | exon | 64397651 | 64397834 | 64397651 | ID=MS.gene56662.t1.exon4;Parent=MS.gene56662.t1 |
| chr5.1 | CDS | 64397651 | 64397834 | 64397651 | ID=cds.MS.gene56662.t1;Parent=MS.gene56662.t1 |
| chr5.1 | exon | 64398377 | 64398474 | 64398377 | ID=MS.gene56662.t1.exon5;Parent=MS.gene56662.t1 |
| chr5.1 | CDS | 64398377 | 64398474 | 64398377 | ID=cds.MS.gene56662.t1;Parent=MS.gene56662.t1 |
| chr5.1 | exon | 64399867 | 64400074 | 64399867 | ID=MS.gene56662.t1.exon6;Parent=MS.gene56662.t1 |
| chr5.1 | CDS | 64399867 | 64400074 | 64399867 | ID=cds.MS.gene56662.t1;Parent=MS.gene56662.t1 |
| chr5.1 | exon | 64400351 | 64400608 | 64400351 | ID=MS.gene56662.t1.exon7;Parent=MS.gene56662.t1 |
| chr5.1 | CDS | 64400351 | 64400608 | 64400351 | ID=cds.MS.gene56662.t1;Parent=MS.gene56662.t1 |
| chr5.1 | exon | 64402063 | 64402281 | 64402063 | ID=MS.gene56662.t1.exon8;Parent=MS.gene56662.t1 |
| chr5.1 | CDS | 64402063 | 64402281 | 64402063 | ID=cds.MS.gene56662.t1;Parent=MS.gene56662.t1 |
| Gene Sequence |
| Protein sequence |
