Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56823.t1 | XP_013456867.1 | 89.4 | 310 | 33 | 0 | 1 | 310 | 1 | 310 | 2.70E-133 | 485 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56823.t1 | Q9FH92 | 57.4 | 209 | 84 | 3 | 89 | 294 | 98 | 304 | 7.3e-63 | 242.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56823.t1 | A0A072UPH3 | 89.4 | 310 | 33 | 0 | 1 | 310 | 1 | 310 | 1.9e-133 | 485.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052732 | MS.gene56823 | 0.802278 | 6.05E-49 | -1.69E-46 |
MS.gene053144 | MS.gene56823 | 0.821437 | 4.04E-53 | -1.69E-46 |
MS.gene054584 | MS.gene56823 | 0.822388 | 2.43E-53 | -1.69E-46 |
MS.gene055537 | MS.gene56823 | 0.801721 | 7.88E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56823.t1 | MTR_4g485570 | 96.129 | 310 | 12 | 0 | 1 | 310 | 1 | 310 | 0.0 | 613 |
MS.gene56823.t1 | MTR_4g485560 | 89.083 | 229 | 24 | 1 | 71 | 299 | 21 | 248 | 2.03e-154 | 432 |
MS.gene56823.t1 | MTR_4g094895 | 52.258 | 310 | 127 | 9 | 1 | 298 | 1 | 301 | 4.98e-104 | 306 |
MS.gene56823.t1 | MTR_3g005710 | 37.363 | 273 | 147 | 3 | 30 | 282 | 19 | 287 | 2.32e-60 | 194 |
MS.gene56823.t1 | MTR_8g080660 | 39.405 | 269 | 147 | 8 | 37 | 293 | 33 | 297 | 3.09e-59 | 192 |
MS.gene56823.t1 | MTR_3g085270 | 36.713 | 286 | 158 | 8 | 24 | 293 | 8 | 286 | 1.28e-57 | 187 |
MS.gene56823.t1 | MTR_7g029100 | 31.773 | 299 | 165 | 11 | 11 | 293 | 4 | 279 | 1.50e-45 | 156 |
MS.gene56823.t1 | MTR_4g102900 | 34.100 | 261 | 155 | 7 | 36 | 293 | 50 | 296 | 2.88e-39 | 140 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56823.t1 | AT5G67210 | 51.299 | 308 | 124 | 8 | 4 | 294 | 6 | 304 | 1.37e-103 | 306 |
MS.gene56823.t1 | AT3G50220 | 50.784 | 319 | 122 | 9 | 1 | 293 | 1 | 310 | 1.44e-99 | 296 |
MS.gene56823.t1 | AT2G15440 | 58.442 | 231 | 87 | 5 | 71 | 295 | 78 | 305 | 1.00e-90 | 273 |
MS.gene56823.t1 | AT1G71690 | 41.091 | 275 | 147 | 7 | 30 | 293 | 24 | 294 | 1.16e-61 | 198 |
MS.gene56823.t1 | AT1G09610 | 38.868 | 265 | 150 | 5 | 36 | 293 | 22 | 281 | 7.96e-60 | 193 |
MS.gene56823.t1 | AT1G67330 | 39.216 | 255 | 142 | 7 | 45 | 293 | 44 | 291 | 7.57e-56 | 183 |
MS.gene56823.t1 | AT1G33800 | 39.189 | 222 | 130 | 2 | 61 | 282 | 63 | 279 | 5.71e-54 | 178 |
MS.gene56823.t1 | AT4G09990 | 41.364 | 220 | 123 | 3 | 64 | 282 | 58 | 272 | 5.79e-53 | 175 |
MS.gene56823.t1 | AT1G27930 | 39.056 | 233 | 129 | 6 | 69 | 293 | 62 | 289 | 2.45e-52 | 174 |
MS.gene56823.t1 | AT4G24910 | 35.616 | 219 | 129 | 6 | 82 | 293 | 94 | 307 | 6.17e-35 | 129 |
Find 83 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACATATTTGTTCATGATTT+TGG | 0.086760 | 4.2:+25233488 | MS.gene56823:CDS |
TGAAAACAGTGCGGCCATTT+TGG | 0.201219 | 4.2:-25233133 | None:intergenic |
ATTTCTTTGTGAAGAGAATT+TGG | 0.237923 | 4.2:+25233541 | MS.gene56823:CDS |
TGGGATGTGATTCTTGTTGA+TGG | 0.262211 | 4.2:+25233374 | MS.gene56823:CDS |
CACCCCAACTTCCTCATCTT+TGG | 0.291696 | 4.2:+25233074 | MS.gene56823:CDS |
GTTAACAATGTAGATCAGTT+AGG | 0.340564 | 4.2:+25233563 | MS.gene56823:CDS |
CCTTTCACTCTCACCGTCTC+TGG | 0.346192 | 4.2:+25232829 | MS.gene56823:CDS |
ACATCGTAAGCTTCTATTCC+TGG | 0.353153 | 4.2:-25233200 | None:intergenic |
TGGTCTGCACTAAACCAAAA+TGG | 0.379219 | 4.2:+25233119 | MS.gene56823:CDS |
TTCTGCAAAGGACATGGATT+TGG | 0.381583 | 4.2:-25233015 | None:intergenic |
ACACCGACACAGACAACAAC+GGG | 0.389377 | 4.2:-25233652 | None:intergenic |
GGATGATGCGGCGGAGGAGG+TGG | 0.400343 | 4.2:-25232922 | None:intergenic |
GGGTGGAGAAGGATAAGCTT+AGG | 0.411176 | 4.2:-25232777 | None:intergenic |
GGTGGATGATGCGGCGGAGG+AGG | 0.415037 | 4.2:-25232925 | None:intergenic |
AGACCAAAGATGAGGAAGTT+GGG | 0.418333 | 4.2:-25233077 | None:intergenic |
CTTAGGATACTCACTAACTT+TGG | 0.420087 | 4.2:-25233234 | None:intergenic |
GACATTCTCCCTGGAGCTGC+CGG | 0.425848 | 4.2:-25233413 | None:intergenic |
GGGTGGAAGAGGAGAGGCGG+TGG | 0.433122 | 4.2:-25232943 | None:intergenic |
ATCACATTTACCAACTCTCT+TGG | 0.441799 | 4.2:+25233354 | MS.gene56823:CDS |
CTACAGTGAAGAATGTTAGA+AGG | 0.444522 | 4.2:-25232863 | None:intergenic |
TCACATTTACCAACTCTCTT+GGG | 0.449338 | 4.2:+25233355 | MS.gene56823:CDS |
AGCGTAGTGGAGGAGAGCTT+TGG | 0.451427 | 4.2:-25232973 | None:intergenic |
TTTGCATGAGAAAGAAGCTT+AGG | 0.452449 | 4.2:-25233251 | None:intergenic |
CATCGTAAGCTTCTATTCCT+GGG | 0.452753 | 4.2:-25233199 | None:intergenic |
CTCAGAACTTTCACCACTGT+CGG | 0.454189 | 4.2:-25233609 | None:intergenic |
GGAAGTTGGGGTGTGGTGTA+AGG | 0.455838 | 4.2:-25233064 | None:intergenic |
GGCGGTGGATGATGCGGCGG+AGG | 0.464726 | 4.2:-25232928 | None:intergenic |
CCAGAGACGGTGAGAGTGAA+AGG | 0.468536 | 4.2:-25232829 | None:intergenic |
TGTGAAGAGAAGGGTGGAGA+AGG | 0.469776 | 4.2:-25232788 | None:intergenic |
TGAGAGTGAAAGGGTGTTGT+TGG | 0.472612 | 4.2:-25232819 | None:intergenic |
GAGAATAACAAATTCTGCAC+AGG | 0.481549 | 4.2:-25233299 | None:intergenic |
TTAACAATGTAGATCAGTTA+GGG | 0.485880 | 4.2:+25233564 | MS.gene56823:CDS |
TGCGGCGGAGGAGGTGGAAG+AGG | 0.489582 | 4.2:-25232916 | None:intergenic |
GAGACCAAAGATGAGGAAGT+TGG | 0.489813 | 4.2:-25233078 | None:intergenic |
GGGATGTGATTCTTGTTGAT+GGG | 0.499135 | 4.2:+25233375 | MS.gene56823:CDS |
TGCAAAGGACATGGATTTGG+TGG | 0.509643 | 4.2:-25233012 | None:intergenic |
GAGAGTTGGTAAATGTGATT+CGG | 0.516015 | 4.2:-25233350 | None:intergenic |
GGAGGAGGTGGAAGAGGTGA+TGG | 0.516630 | 4.2:-25232910 | None:intergenic |
AAGATCGCTGACATTCTCCC+TGG | 0.516958 | 4.2:-25233422 | None:intergenic |
TTGGTAACGGAGGGTGGAAG+AGG | 0.525274 | 4.2:-25232954 | None:intergenic |
GTTGTCTGTGTCGGTGTCAA+AGG | 0.525550 | 4.2:+25233658 | MS.gene56823:CDS |
TCACAGCAGCAGTGTTGGCT+AGG | 0.529601 | 4.2:+25233444 | MS.gene56823:CDS |
GTTGATTTCTGCAAAGGACA+TGG | 0.530504 | 4.2:-25233021 | None:intergenic |
TTCCCCGTTGTTGTCTGTGT+CGG | 0.530780 | 4.2:+25233649 | MS.gene56823:CDS |
TTGAAGAGGAAGCGTAGTGG+AGG | 0.536802 | 4.2:-25232983 | None:intergenic |
GTGTGGTGTAAGGTGAAGAG+TGG | 0.537699 | 4.2:-25233054 | None:intergenic |
CAGACCAGAGTAGTGACTCA+TGG | 0.544736 | 4.2:-25233103 | None:intergenic |
TATGACGTTGATTTCTGCAA+AGG | 0.551620 | 4.2:-25233027 | None:intergenic |
GGAGGTGGAAGAGGTGATGG+TGG | 0.559875 | 4.2:-25232907 | None:intergenic |
GGAGCTTGTTTGTGAAGAGA+AGG | 0.561069 | 4.2:-25232798 | None:intergenic |
GCTGCCGGAAAATACCCTCT+TGG | 0.561963 | 4.2:-25233398 | None:intergenic |
GTTGGCTAGGAGCAAGAAAG+TGG | 0.565369 | 4.2:+25233457 | MS.gene56823:CDS |
AGGAGAGGCGGTGGATGATG+CGG | 0.565850 | 4.2:-25232934 | None:intergenic |
GAGCTTGTTTGTGAAGAGAA+GGG | 0.566931 | 4.2:-25232797 | None:intergenic |
GATCTTCACAGCAGCAGTGT+TGG | 0.569175 | 4.2:+25233439 | MS.gene56823:CDS |
CTTGTTTGTGAAGAGAAGGG+TGG | 0.573595 | 4.2:-25232794 | None:intergenic |
GAATCACATCCCAAGAGAGT+TGG | 0.574578 | 4.2:-25233364 | None:intergenic |
TTATTCTCAGAGTGTAAACT+CGG | 0.575688 | 4.2:+25233314 | MS.gene56823:CDS |
GTGTCAAAGGATGTTGATTG+AGG | 0.579266 | 4.2:+25233671 | MS.gene56823:CDS |
AGAGCTTTGGTAACGGAGGG+TGG | 0.585261 | 4.2:-25232960 | None:intergenic |
AGACCAGAGTAGTGACTCAT+GGG | 0.591823 | 4.2:-25233102 | None:intergenic |
AACGGAGGGTGGAAGAGGAG+AGG | 0.598706 | 4.2:-25232949 | None:intergenic |
CAGAGACGGTGAGAGTGAAA+GGG | 0.600070 | 4.2:-25232828 | None:intergenic |
TTTGGTGGTGGTGTTTGAAG+AGG | 0.601857 | 4.2:-25232997 | None:intergenic |
GACCAAAGATGAGGAAGTTG+GGG | 0.603361 | 4.2:-25233076 | None:intergenic |
GTGGAGGAGAGCTTTGGTAA+CGG | 0.611545 | 4.2:-25232967 | None:intergenic |
GGAGGGTGGAAGAGGAGAGG+CGG | 0.612135 | 4.2:-25232946 | None:intergenic |
TTCTTGTTGATGGGCCAAGA+GGG | 0.619497 | 4.2:+25233384 | MS.gene56823:CDS |
TCACCCATGAGTCACTACTC+TGG | 0.620593 | 4.2:+25233099 | MS.gene56823:CDS |
AAAGGACATGGATTTGGTGG+TGG | 0.622061 | 4.2:-25233009 | None:intergenic |
TGTTTGAAGAGGAAGCGTAG+TGG | 0.631833 | 4.2:-25232986 | None:intergenic |
GACACCGACACAGACAACAA+CGG | 0.642075 | 4.2:-25233653 | None:intergenic |
AGAGGCGGTGGATGATGCGG+CGG | 0.647328 | 4.2:-25232931 | None:intergenic |
AGGAGAGCTTTGGTAACGGA+GGG | 0.658909 | 4.2:-25232963 | None:intergenic |
CATGGGTGAGACCAAAGATG+AGG | 0.664296 | 4.2:-25233085 | None:intergenic |
GAGGAGAGCTTTGGTAACGG+AGG | 0.669266 | 4.2:-25232964 | None:intergenic |
AAGATGAGGAAGTTGGGGTG+TGG | 0.672911 | 4.2:-25233071 | None:intergenic |
AAATTTGAACAGTCAAACCC+AGG | 0.678940 | 4.2:+25233182 | MS.gene56823:CDS |
TTGGCTAGGAGCAAGAAAGT+GGG | 0.680921 | 4.2:+25233458 | MS.gene56823:CDS |
ATTCTTGTTGATGGGCCAAG+AGG | 0.712899 | 4.2:+25233383 | MS.gene56823:CDS |
CACCGACACAGACAACAACG+GGG | 0.763060 | 4.2:-25233651 | None:intergenic |
TTTCATCTATGAAAACAGTG+CGG | 0.775770 | 4.2:-25233142 | None:intergenic |
GTGAAGAGTGAAACCGACAG+TGG | 0.792416 | 4.2:+25233596 | MS.gene56823:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | ATTTCTTTGTGAAGAGAATT+TGG | + | chr4.2:25233541-25233560 | MS.gene56823:CDS | 25.0% |
! | TTAACAATGTAGATCAGTTA+GGG | + | chr4.2:25233564-25233583 | MS.gene56823:CDS | 25.0% |
!! | CACATATTTGTTCATGATTT+TGG | + | chr4.2:25233488-25233507 | MS.gene56823:CDS | 25.0% |
GTTAACAATGTAGATCAGTT+AGG | + | chr4.2:25233563-25233582 | MS.gene56823:CDS | 30.0% | |
TTATTCTCAGAGTGTAAACT+CGG | + | chr4.2:25233314-25233333 | MS.gene56823:CDS | 30.0% | |
TTTCATCTATGAAAACAGTG+CGG | - | chr4.2:25233145-25233164 | None:intergenic | 30.0% | |
AAATTTGAACAGTCAAACCC+AGG | + | chr4.2:25233182-25233201 | MS.gene56823:CDS | 35.0% | |
ATCACATTTACCAACTCTCT+TGG | + | chr4.2:25233354-25233373 | MS.gene56823:CDS | 35.0% | |
CTACAGTGAAGAATGTTAGA+AGG | - | chr4.2:25232866-25232885 | None:intergenic | 35.0% | |
CTTAGGATACTCACTAACTT+TGG | - | chr4.2:25233237-25233256 | None:intergenic | 35.0% | |
GAGAATAACAAATTCTGCAC+AGG | - | chr4.2:25233302-25233321 | None:intergenic | 35.0% | |
TCACATTTACCAACTCTCTT+GGG | + | chr4.2:25233355-25233374 | MS.gene56823:CDS | 35.0% | |
TTTGCATGAGAAAGAAGCTT+AGG | - | chr4.2:25233254-25233273 | None:intergenic | 35.0% | |
!! | GAGAGTTGGTAAATGTGATT+CGG | - | chr4.2:25233353-25233372 | None:intergenic | 35.0% |
!! | TATGACGTTGATTTCTGCAA+AGG | - | chr4.2:25233030-25233049 | None:intergenic | 35.0% |
!! | TCATGATTTTGGAAGAGAAG+TGG | + | chr4.2:25233499-25233518 | MS.gene56823:CDS | 35.0% |
ACATCGTAAGCTTCTATTCC+TGG | - | chr4.2:25233203-25233222 | None:intergenic | 40.0% | |
AGACCAAAGATGAGGAAGTT+GGG | - | chr4.2:25233080-25233099 | None:intergenic | 40.0% | |
CATCGTAAGCTTCTATTCCT+GGG | - | chr4.2:25233202-25233221 | None:intergenic | 40.0% | |
GGAAGAAGAAAAACCAGAGA+CGG | - | chr4.2:25232845-25232864 | None:intergenic | 40.0% | |
GGGATGTGATTCTTGTTGAT+GGG | + | chr4.2:25233375-25233394 | MS.gene56823:CDS | 40.0% | |
TGGGATGTGATTCTTGTTGA+TGG | + | chr4.2:25233374-25233393 | MS.gene56823:CDS | 40.0% | |
TGGTCTGCACTAAACCAAAA+TGG | + | chr4.2:25233119-25233138 | MS.gene56823:CDS | 40.0% | |
TTCTGCAAAGGACATGGATT+TGG | - | chr4.2:25233018-25233037 | None:intergenic | 40.0% | |
! | GAGCTTGTTTGTGAAGAGAA+GGG | - | chr4.2:25232800-25232819 | None:intergenic | 40.0% |
! | GTTGATTTCTGCAAAGGACA+TGG | - | chr4.2:25233024-25233043 | None:intergenic | 40.0% |
!! | AGATCAGTTAGGGCATTTTG+TGG | + | chr4.2:25233574-25233593 | MS.gene56823:CDS | 40.0% |
AGACCAGAGTAGTGACTCAT+GGG | - | chr4.2:25233105-25233124 | None:intergenic | 45.0% | |
CTCAGAACTTTCACCACTGT+CGG | - | chr4.2:25233612-25233631 | None:intergenic | 45.0% | |
CTTGTTTGTGAAGAGAAGGG+TGG | - | chr4.2:25232797-25232816 | None:intergenic | 45.0% | |
GAATCACATCCCAAGAGAGT+TGG | - | chr4.2:25233367-25233386 | None:intergenic | 45.0% | |
GACCAAAGATGAGGAAGTTG+GGG | - | chr4.2:25233079-25233098 | None:intergenic | 45.0% | |
GAGACCAAAGATGAGGAAGT+TGG | - | chr4.2:25233081-25233100 | None:intergenic | 45.0% | |
TGCAAAGGACATGGATTTGG+TGG | - | chr4.2:25233015-25233034 | None:intergenic | 45.0% | |
TTGGCTAGGAGCAAGAAAGT+GGG | + | chr4.2:25233458-25233477 | MS.gene56823:CDS | 45.0% | |
! | ATTCTTGTTGATGGGCCAAG+AGG | + | chr4.2:25233383-25233402 | MS.gene56823:CDS | 45.0% |
! | GGAGCTTGTTTGTGAAGAGA+AGG | - | chr4.2:25232801-25232820 | None:intergenic | 45.0% |
! | TGAAAACAGTGCGGCCATTT+TGG | - | chr4.2:25233136-25233155 | None:intergenic | 45.0% |
! | TGTTTGAAGAGGAAGCGTAG+TGG | - | chr4.2:25232989-25233008 | None:intergenic | 45.0% |
! | TTCTTGTTGATGGGCCAAGA+GGG | + | chr4.2:25233384-25233403 | MS.gene56823:CDS | 45.0% |
!! | AAAGGACATGGATTTGGTGG+TGG | - | chr4.2:25233012-25233031 | None:intergenic | 45.0% |
!! | TGAGAGTGAAAGGGTGTTGT+TGG | - | chr4.2:25232822-25232841 | None:intergenic | 45.0% |
!! | TTTGGTGGTGGTGTTTGAAG+AGG | - | chr4.2:25233000-25233019 | None:intergenic | 45.0% |
AAGATCGCTGACATTCTCCC+TGG | - | chr4.2:25233425-25233444 | None:intergenic | 50.0% | |
AAGATGAGGAAGTTGGGGTG+TGG | - | chr4.2:25233074-25233093 | None:intergenic | 50.0% | |
ACACCGACACAGACAACAAC+GGG | - | chr4.2:25233655-25233674 | None:intergenic | 50.0% | |
CACCCCAACTTCCTCATCTT+TGG | + | chr4.2:25233074-25233093 | MS.gene56823:CDS | 50.0% | |
CAGACCAGAGTAGTGACTCA+TGG | - | chr4.2:25233106-25233125 | None:intergenic | 50.0% | |
CAGAGACGGTGAGAGTGAAA+GGG | - | chr4.2:25232831-25232850 | None:intergenic | 50.0% | |
CATGGGTGAGACCAAAGATG+AGG | - | chr4.2:25233088-25233107 | None:intergenic | 50.0% | |
GACACCGACACAGACAACAA+CGG | - | chr4.2:25233656-25233675 | None:intergenic | 50.0% | |
GATCTTCACAGCAGCAGTGT+TGG | + | chr4.2:25233439-25233458 | MS.gene56823:CDS | 50.0% | |
GGGTGGAGAAGGATAAGCTT+AGG | - | chr4.2:25232780-25232799 | None:intergenic | 50.0% | |
GTGAAGAGTGAAACCGACAG+TGG | + | chr4.2:25233596-25233615 | MS.gene56823:CDS | 50.0% | |
GTGTGGTGTAAGGTGAAGAG+TGG | - | chr4.2:25233057-25233076 | None:intergenic | 50.0% | |
GTTGGCTAGGAGCAAGAAAG+TGG | + | chr4.2:25233457-25233476 | MS.gene56823:CDS | 50.0% | |
TCACCCATGAGTCACTACTC+TGG | + | chr4.2:25233099-25233118 | MS.gene56823:CDS | 50.0% | |
TGTGAAGAGAAGGGTGGAGA+AGG | - | chr4.2:25232791-25232810 | None:intergenic | 50.0% | |
TTCCCCGTTGTTGTCTGTGT+CGG | + | chr4.2:25233649-25233668 | MS.gene56823:CDS | 50.0% | |
! | GTGGAGGAGAGCTTTGGTAA+CGG | - | chr4.2:25232970-25232989 | None:intergenic | 50.0% |
! | TTGAAGAGGAAGCGTAGTGG+AGG | - | chr4.2:25232986-25233005 | None:intergenic | 50.0% |
!! | AGGAGAGCTTTGGTAACGGA+GGG | - | chr4.2:25232966-25232985 | None:intergenic | 50.0% |
!! | GTTGTCTGTGTCGGTGTCAA+AGG | + | chr4.2:25233658-25233677 | MS.gene56823:CDS | 50.0% |
!!! | TGGGCCAAGAGGGTATTTTC+CGG | + | chr4.2:25233394-25233413 | MS.gene56823:CDS | 50.0% |
CACCGACACAGACAACAACG+GGG | - | chr4.2:25233654-25233673 | None:intergenic | 55.0% | |
CCAGAGACGGTGAGAGTGAA+AGG | - | chr4.2:25232832-25232851 | None:intergenic | 55.0% | |
CCTTTCACTCTCACCGTCTC+TGG | + | chr4.2:25232829-25232848 | MS.gene56823:CDS | 55.0% | |
GCTGCCGGAAAATACCCTCT+TGG | - | chr4.2:25233401-25233420 | None:intergenic | 55.0% | |
GGAAGTTGGGGTGTGGTGTA+AGG | - | chr4.2:25233067-25233086 | None:intergenic | 55.0% | |
! | AGCGTAGTGGAGGAGAGCTT+TGG | - | chr4.2:25232976-25232995 | None:intergenic | 55.0% |
! | GGTATTTTCCGGCAGCTCCA+GGG | + | chr4.2:25233405-25233424 | MS.gene56823:CDS | 55.0% |
!! | AGAGCTTTGGTAACGGAGGG+TGG | - | chr4.2:25232963-25232982 | None:intergenic | 55.0% |
!! | GAGGAGAGCTTTGGTAACGG+AGG | - | chr4.2:25232967-25232986 | None:intergenic | 55.0% |
!! | TCACAGCAGCAGTGTTGGCT+AGG | + | chr4.2:25233444-25233463 | MS.gene56823:CDS | 55.0% |
!! | TTGGTAACGGAGGGTGGAAG+AGG | - | chr4.2:25232957-25232976 | None:intergenic | 55.0% |
AACGGAGGGTGGAAGAGGAG+AGG | - | chr4.2:25232952-25232971 | None:intergenic | 60.0% | |
AGGAGAGGCGGTGGATGATG+CGG | - | chr4.2:25232937-25232956 | None:intergenic | 60.0% | |
GACATTCTCCCTGGAGCTGC+CGG | - | chr4.2:25233416-25233435 | None:intergenic | 60.0% | |
GGAGGAGGTGGAAGAGGTGA+TGG | - | chr4.2:25232913-25232932 | None:intergenic | 60.0% | |
! | GGAGGTGGAAGAGGTGATGG+TGG | - | chr4.2:25232910-25232929 | None:intergenic | 60.0% |
! | GGGTATTTTCCGGCAGCTCC+AGG | + | chr4.2:25233404-25233423 | MS.gene56823:CDS | 60.0% |
AGAGGCGGTGGATGATGCGG+CGG | - | chr4.2:25232934-25232953 | None:intergenic | 65.0% | |
GGAGGGTGGAAGAGGAGAGG+CGG | - | chr4.2:25232949-25232968 | None:intergenic | 65.0% | |
GGATGATGCGGCGGAGGAGG+TGG | - | chr4.2:25232925-25232944 | None:intergenic | 70.0% | |
GGGTGGAAGAGGAGAGGCGG+TGG | - | chr4.2:25232946-25232965 | None:intergenic | 70.0% | |
GGTGGATGATGCGGCGGAGG+AGG | - | chr4.2:25232928-25232947 | None:intergenic | 70.0% | |
TGCGGCGGAGGAGGTGGAAG+AGG | - | chr4.2:25232919-25232938 | None:intergenic | 70.0% | |
GGCGGTGGATGATGCGGCGG+AGG | - | chr4.2:25232931-25232950 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 25232759 | 25233691 | 25232759 | ID=MS.gene56823 |
chr4.2 | mRNA | 25232759 | 25233691 | 25232759 | ID=MS.gene56823.t1;Parent=MS.gene56823 |
chr4.2 | exon | 25232759 | 25233691 | 25232759 | ID=MS.gene56823.t1.exon1;Parent=MS.gene56823.t1 |
chr4.2 | CDS | 25232759 | 25233691 | 25232759 | ID=cds.MS.gene56823.t1;Parent=MS.gene56823.t1 |
Gene Sequence |
Protein sequence |