AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055537


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055537.t1 MTR_3g498755 95.973 447 5 1 19 452 2 448 0.0 882
MS.gene055537.t1 MTR_8g099930 77.007 461 88 5 5 452 10 465 0.0 724
MS.gene055537.t1 MTR_7g021130 68.817 465 119 5 1 452 9 460 0.0 664
MS.gene055537.t1 MTR_3g434850 59.050 442 161 5 24 452 23 457 0.0 564
MS.gene055537.t1 MTR_2g449850 56.000 450 174 6 15 449 22 462 0.0 518
MS.gene055537.t1 MTR_1g040370 50.435 460 169 6 4 450 3 416 1.32e-160 460
MS.gene055537.t1 MTR_1g102130 47.380 439 180 9 27 449 87 490 8.95e-138 405
MS.gene055537.t1 MTR_3g090150 43.764 441 222 6 30 451 32 465 1.66e-135 398
MS.gene055537.t1 MTR_3g090130 43.836 438 220 6 30 449 27 456 1.16e-132 390
MS.gene055537.t1 MTR_5g072570 44.318 440 219 7 30 449 28 461 1.67e-131 388
MS.gene055537.t1 MTR_7g013790 41.164 481 238 11 3 452 1 467 3.10e-115 346
MS.gene055537.t1 MTR_3g079590 44.470 434 202 12 29 445 75 486 4.08e-112 339
MS.gene055537.t1 MTR_3g079560 42.358 458 225 10 9 449 55 490 5.20e-110 334
MS.gene055537.t1 MTR_3g034290 40.868 438 221 11 30 449 73 490 2.19e-108 330
MS.gene055537.t1 MTR_3g079570 42.857 434 208 11 29 445 76 486 4.95e-108 328
MS.gene055537.t1 MTR_0003s0560 40.503 437 222 10 30 449 72 487 3.55e-107 327
MS.gene055537.t1 MTR_1g095560 38.864 440 235 10 30 449 31 456 4.10e-107 325
MS.gene055537.t1 MTR_3g079600 41.379 435 219 11 28 445 72 487 4.03e-105 321
MS.gene055537.t1 MTR_3g079620 40.716 447 216 12 29 449 75 498 1.54e-104 320
MS.gene055537.t1 MTR_1g021020 39.683 441 222 10 29 451 75 489 3.41e-103 316
MS.gene055537.t1 MTR_2g062990 37.339 466 259 10 5 451 13 464 1.49e-102 314
MS.gene055537.t1 MTR_3g079630 41.124 445 209 13 29 445 75 494 1.85e-102 315
MS.gene055537.t1 MTR_2g012860 38.616 448 239 11 29 451 39 475 3.67e-101 310
MS.gene055537.t1 MTR_1g021010 40.674 445 213 13 29 451 73 488 9.17e-101 310
MS.gene055537.t1 MTR_1g095560 36.229 472 235 11 30 449 31 488 2.31e-100 309
MS.gene055537.t1 MTR_2g062980 37.983 466 256 11 5 451 13 464 2.99e-100 308
MS.gene055537.t1 MTR_1g095540 38.095 462 248 13 11 449 10 456 8.23e-100 306
MS.gene055537.t1 MTR_4g075150 37.668 446 239 11 30 450 33 464 2.71e-99 305
MS.gene055537.t1 MTR_4g089155 38.444 450 237 11 29 451 51 487 5.95e-99 305
MS.gene055537.t1 MTR_4g075150 38.063 444 238 11 30 450 33 462 6.97e-99 304
MS.gene055537.t1 MTR_1g020090 39.091 440 222 11 30 451 88 499 1.40e-98 305
MS.gene055537.t1 MTR_4g122950 39.168 457 227 14 29 449 36 477 5.03e-98 303
MS.gene055537.t1 MTR_2g063000 37.757 437 239 10 35 451 42 465 9.65e-98 301
MS.gene055537.t1 MTR_2g012850 37.632 473 250 12 6 449 9 465 4.46e-96 297
MS.gene055537.t1 MTR_4g122960 37.363 455 236 13 29 449 36 475 1.34e-93 291
MS.gene055537.t1 MTR_2g081620 36.325 468 251 15 3 445 14 459 1.13e-91 286
MS.gene055537.t1 MTR_3g034290 40.341 352 176 9 30 363 73 408 2.86e-83 262
MS.gene055537.t1 MTR_0075s0010 39.535 387 148 10 30 397 6 325 2.49e-79 249
MS.gene055537.t1 MTR_2g063000 33.028 436 230 10 35 451 42 434 1.54e-75 243
MS.gene055537.t1 MTR_7g051430 31.881 505 272 14 3 448 4 495 1.34e-68 226
MS.gene055537.t1 MTR_8g011350 31.967 488 238 13 32 448 31 495 2.60e-66 221
MS.gene055537.t1 MTR_0003s0560 42.910 268 127 6 30 281 72 329 7.55e-66 215
MS.gene055537.t1 MTR_7g080180 32.172 488 243 18 32 448 28 498 7.90e-62 209
MS.gene055537.t1 MTR_8g011350 31.317 463 220 15 32 421 31 468 5.62e-57 196
MS.gene055537.t1 MTR_4g021520 28.728 456 271 15 27 448 35 470 2.76e-54 188
MS.gene055537.t1 MTR_4g021490 28.009 457 273 16 27 448 35 470 1.24e-53 186
MS.gene055537.t1 MTR_4g021500 28.667 450 267 15 27 442 35 464 4.66e-50 182
MS.gene055537.t1 MTR_4g021500 28.538 431 256 15 42 448 485 887 4.10e-46 171
MS.gene055537.t1 MTR_7g080180 31.839 446 216 18 32 406 28 456 4.87e-50 177
MS.gene055537.t1 MTR_4g021500 28.667 450 267 15 27 442 35 464 5.21e-50 182
MS.gene055537.t1 MTR_4g021500 28.153 444 259 15 42 448 485 905 1.20e-46 173
MS.gene055537.t1 MTR_4g021530 26.891 476 293 16 7 448 16 470 1.06e-49 176
MS.gene055537.t1 MTR_4g021535 27.851 456 271 15 29 448 33 466 2.05e-49 175
MS.gene055537.t1 MTR_4g021510 27.632 456 276 14 27 448 34 469 4.20e-49 174
MS.gene055537.t1 MTR_2g018600 28.172 465 279 15 21 448 23 469 3.17e-48 172
MS.gene055537.t1 MTR_7g051430 31.667 420 219 13 3 363 4 414 8.66e-47 167
MS.gene055537.t1 MTR_3g100420 27.327 505 272 15 9 448 22 496 4.84e-46 166
MS.gene055537.t1 MTR_2g018590 26.531 490 275 14 9 448 15 469 6.37e-46 166
MS.gene055537.t1 MTR_2g018630 27.350 468 272 15 21 448 26 465 6.99e-45 163
MS.gene055537.t1 MTR_1g050545 28.037 428 254 14 44 445 81 480 8.41e-45 163
MS.gene055537.t1 MTR_1g094155 28.706 425 246 15 48 445 92 486 3.66e-43 159
MS.gene055537.t1 MTR_4g057595 28.504 421 252 13 48 445 99 493 4.28e-42 156
MS.gene055537.t1 MTR_4g057585 28.241 432 261 13 37 445 87 492 4.82e-42 155
MS.gene055537.t1 MTR_4g021520 27.778 414 245 15 27 406 35 428 3.34e-41 152
MS.gene055537.t1 MTR_2g095750 26.726 449 267 16 30 446 80 498 2.03e-40 151
MS.gene055537.t1 MTR_4g057600 27.887 459 257 18 19 446 77 492 5.66e-40 150
MS.gene055537.t1 MTR_4g057570 29.120 443 225 19 49 446 92 490 1.03e-39 149
MS.gene055537.t1 MTR_2g095730 26.107 429 258 16 48 446 96 495 9.71e-37 141
MS.gene055537.t1 MTR_2g009200 26.369 493 259 18 6 448 1 439 2.07e-36 139
MS.gene055537.t1 MTR_4g021535 26.432 454 233 17 29 448 33 419 1.40e-35 136
MS.gene055537.t1 MTR_3g045770 25.000 448 275 14 32 443 27 449 3.42e-35 136
MS.gene055537.t1 MTR_7g100560 35.593 236 95 7 41 270 67 251 8.15e-32 124
MS.gene055537.t1 MTR_5g097180 26.190 462 276 17 9 443 9 432 3.73e-31 125
MS.gene055537.t1 MTR_2g095710 25.500 400 260 14 61 446 106 481 2.59e-29 120
MS.gene055537.t1 MTR_4g084710 25.991 454 278 16 17 443 12 434 3.63e-29 119
MS.gene055537.t1 MTR_2g018630 25.344 363 224 12 106 448 25 360 7.24e-28 114
MS.gene055537.t1 MTR_4g056520 26.790 433 266 15 49 444 36 454 1.63e-23 102
MS.gene055537.t1 MTR_1g051175 52.055 73 34 1 38 109 18 90 1.80e-19 88.6
MS.gene055537.t1 MTR_2g084530 26.995 426 248 16 49 432 36 440 4.29e-17 83.6
MS.gene055537.t1 MTR_2g039800 62.222 45 17 0 404 448 50 94 1.43e-14 69.7
MS.gene055537.t1 MTR_8g007520 42.254 71 41 0 334 404 111 181 1.21e-13 69.7
MS.gene055537.t1 MTR_7g021040 74.359 39 10 0 410 448 19 57 2.38e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055537.t1 AT1G28110 75.114 438 92 4 28 452 28 461 0.0 689
MS.gene055537.t1 AT1G28110 75.114 438 92 4 28 452 28 461 0.0 689
MS.gene055537.t1 AT2G33530 73.121 439 103 3 27 452 29 465 0.0 683
MS.gene055537.t1 AT1G43780 47.500 440 208 7 30 450 36 471 1.01e-139 409
MS.gene055537.t1 AT5G42240 46.136 440 211 7 30 449 31 464 6.67e-134 394
MS.gene055537.t1 AT2G12480 43.348 466 235 8 3 449 2 457 8.58e-134 394
MS.gene055537.t1 AT5G42230 43.226 465 241 7 3 449 1 460 3.84e-133 392
MS.gene055537.t1 AT5G42230 43.226 465 241 7 3 449 1 460 3.84e-133 392
MS.gene055537.t1 AT2G12480 42.275 466 216 9 3 449 2 433 4.72e-126 373
MS.gene055537.t1 AT2G12480 42.060 466 215 9 3 449 2 431 3.02e-124 369
MS.gene055537.t1 AT2G12480 41.970 467 215 10 3 449 2 432 1.78e-122 364
MS.gene055537.t1 AT2G24010 41.855 442 222 10 30 452 29 454 1.27e-112 339
MS.gene055537.t1 AT3G02110 41.538 455 222 11 27 451 33 473 1.48e-111 337
MS.gene055537.t1 AT4G30610 38.958 480 250 12 1 452 1 465 3.73e-110 333
MS.gene055537.t1 AT3G07990 40.590 441 226 10 30 449 32 457 4.34e-109 330
MS.gene055537.t1 AT2G24000 40.133 451 227 12 30 452 29 464 3.86e-108 328
MS.gene055537.t1 AT2G24010 40.263 457 223 11 30 452 29 469 3.28e-107 326
MS.gene055537.t1 AT2G35780 39.111 450 234 11 22 449 20 451 3.99e-107 325
MS.gene055537.t1 AT2G05850 37.892 446 232 11 30 451 62 486 9.66e-105 320
MS.gene055537.t1 AT2G35770 39.091 440 231 11 30 449 36 458 4.08e-103 315
MS.gene055537.t1 AT3G17180 39.868 454 228 9 28 449 35 475 1.15e-102 314
MS.gene055537.t1 AT1G61130 37.866 478 249 15 1 449 2 460 2.13e-101 311
MS.gene055537.t1 AT2G24010 38.125 480 222 12 32 452 2 465 3.64e-101 310
MS.gene055537.t1 AT4G30810 36.695 466 250 14 10 448 14 461 1.80e-99 306
MS.gene055537.t1 AT3G63470 39.269 438 232 10 30 451 80 499 1.48e-98 305
MS.gene055537.t1 AT4G15100 36.798 481 253 12 6 448 13 480 2.42e-98 303
MS.gene055537.t1 AT5G23210 36.287 474 240 13 22 449 38 495 1.24e-95 297
MS.gene055537.t1 AT3G52000 37.557 442 234 11 30 451 62 481 1.49e-95 296
MS.gene055537.t1 AT5G08260 38.362 464 240 13 19 449 26 476 1.60e-95 296
MS.gene055537.t1 AT3G52010 37.808 447 240 12 25 451 58 486 5.24e-95 295
MS.gene055537.t1 AT1G11080 38.546 454 232 11 30 449 49 489 5.55e-95 295
MS.gene055537.t1 AT1G11080 38.546 454 232 11 30 449 49 489 6.17e-95 295
MS.gene055537.t1 AT3G17180 38.072 415 212 9 28 410 35 436 1.31e-85 269
MS.gene055537.t1 AT3G52020 35.892 443 239 13 30 449 78 498 5.70e-85 270
MS.gene055537.t1 AT5G23210 35.431 429 216 12 22 404 38 451 1.73e-81 259
MS.gene055537.t1 AT2G24000 33.638 437 212 12 30 452 29 401 1.93e-74 239
MS.gene055537.t1 AT2G24010 37.978 366 182 9 32 363 2 356 3.68e-74 237
MS.gene055537.t1 AT5G23210 34.550 411 212 11 81 449 5 400 5.39e-73 235
MS.gene055537.t1 AT5G23210 34.398 407 210 11 85 449 8 399 6.37e-72 233
MS.gene055537.t1 AT3G25420 32.996 494 250 17 21 448 16 494 1.22e-71 234
MS.gene055537.t1 AT4G12910 32.943 513 257 18 1 445 1 494 1.38e-71 234
MS.gene055537.t1 AT2G22990 30.296 439 250 11 35 448 26 433 2.86e-61 206
MS.gene055537.t1 AT2G22990 30.698 430 251 12 35 448 26 424 7.80e-59 199
MS.gene055537.t1 AT4G12910 32.068 474 235 18 1 406 1 455 2.15e-58 199
MS.gene055537.t1 AT5G23210 33.149 362 186 10 85 404 8 355 7.39e-58 195
MS.gene055537.t1 AT2G23000 30.112 445 257 11 29 448 22 437 1.17e-57 196
MS.gene055537.t1 AT2G23000 30.112 445 257 11 29 448 22 437 1.17e-57 196
MS.gene055537.t1 AT2G22980 29.176 449 259 14 24 448 17 430 7.36e-57 194
MS.gene055537.t1 AT2G22920 29.258 458 259 14 21 448 13 435 2.82e-56 192
MS.gene055537.t1 AT3G10450 29.646 452 246 14 29 448 26 437 5.09e-56 192
MS.gene055537.t1 AT1G73300 28.924 446 264 13 26 448 26 441 1.78e-55 191
MS.gene055537.t1 AT1G73300 28.924 446 264 13 26 448 26 441 1.78e-55 191
MS.gene055537.t1 AT2G22970 30.296 439 248 12 35 448 28 433 2.64e-55 190
MS.gene055537.t1 AT1G73280 27.907 473 284 13 1 448 1 441 3.63e-55 190
MS.gene055537.t1 AT3G12203 29.412 442 247 13 35 448 12 416 1.43e-54 187
MS.gene055537.t1 AT2G23010 29.185 466 271 13 11 448 3 437 2.09e-54 187
MS.gene055537.t1 AT3G12203 29.412 442 247 13 35 448 33 437 2.69e-54 187
MS.gene055537.t1 AT1G73290 30.357 448 253 15 26 448 25 438 8.40e-54 186
MS.gene055537.t1 AT2G22990 30.266 413 233 10 35 422 26 408 9.63e-54 185
MS.gene055537.t1 AT2G23010 28.970 466 272 13 11 448 3 437 1.17e-53 186
MS.gene055537.t1 AT2G22990 30.193 414 234 10 35 423 26 409 1.24e-53 186
MS.gene055537.t1 AT3G10450 29.698 431 231 14 50 448 4 394 3.70e-53 183
MS.gene055537.t1 AT5G36180 28.281 442 265 12 29 448 30 441 1.53e-52 183
MS.gene055537.t1 AT5G09640 28.947 456 268 15 32 448 27 465 1.83e-52 183
MS.gene055537.t1 AT1G33540 29.437 462 261 15 29 448 26 464 2.86e-52 182
MS.gene055537.t1 AT3G12230 29.825 456 245 17 28 448 20 435 3.02e-51 179
MS.gene055537.t1 AT3G12220 29.322 457 246 15 28 448 20 435 3.61e-51 179
MS.gene055537.t1 AT1G73310 28.731 449 261 14 26 448 26 441 5.90e-51 179
MS.gene055537.t1 AT1G73270 27.477 444 266 12 29 448 30 441 6.48e-51 178
MS.gene055537.t1 AT1G73270 27.477 444 266 12 29 448 30 441 8.88e-51 178
MS.gene055537.t1 AT3G12203 29.567 416 228 13 61 448 1 379 9.77e-51 176
MS.gene055537.t1 AT3G12240 30.022 453 248 15 28 448 21 436 1.03e-50 178
MS.gene055537.t1 AT2G22980 29.009 424 243 13 24 423 17 406 5.52e-50 175
MS.gene055537.t1 AT2G22980 28.704 432 250 13 24 431 17 414 7.41e-50 176
MS.gene055537.t1 AT1G33540 29.252 441 247 15 50 448 4 421 9.03e-50 175
MS.gene055537.t1 AT3G10450 29.040 427 232 13 29 423 26 413 3.03e-48 171
MS.gene055537.t1 AT2G22970 29.736 417 230 12 35 423 28 409 6.33e-48 170
MS.gene055537.t1 AT3G12220 29.002 431 234 14 50 448 15 405 8.12e-48 169
MS.gene055537.t1 AT2G22970 29.493 434 248 12 35 443 28 428 1.66e-47 169
MS.gene055537.t1 AT5G22980 29.062 437 248 18 39 446 91 494 8.28e-46 166
MS.gene055537.t1 AT3G10450 29.064 406 217 13 50 423 4 370 3.38e-45 161
MS.gene055537.t1 AT2G22920 28.777 417 233 13 21 407 13 395 2.02e-44 160
MS.gene055537.t1 AT3G45010 28.311 438 256 19 37 446 92 499 5.68e-44 161
MS.gene055537.t1 AT2G22990 29.310 348 211 9 106 448 2 319 6.48e-44 157
MS.gene055537.t1 AT3G56540 50.633 158 60 4 30 172 78 232 1.33e-43 154
MS.gene055537.t1 AT2G22990 29.023 348 212 9 106 448 2 319 3.49e-43 155
MS.gene055537.t1 AT1G73290 29.484 407 229 14 26 407 25 398 9.28e-41 150
MS.gene055537.t1 AT3G10410 28.211 436 253 16 37 444 90 493 1.12e-40 152
MS.gene055537.t1 AT1G73310 27.670 412 240 13 26 411 26 405 4.37e-40 149
MS.gene055537.t1 AT2G22980 30.120 332 183 10 24 332 17 322 1.50e-38 143
MS.gene055537.t1 AT1G73280 26.225 347 221 10 106 448 24 339 5.79e-36 135
MS.gene055537.t1 AT1G73280 26.377 345 219 10 108 448 1 314 5.92e-36 135
MS.gene055537.t1 AT1G73290 33.913 230 126 6 26 232 25 251 1.91e-35 134
MS.gene055537.t1 AT2G22920 29.641 334 178 10 21 328 13 315 2.53e-35 133
MS.gene055537.t1 AT3G12220 30.053 376 209 13 28 371 20 373 4.22e-35 134
MS.gene055537.t1 AT1G73280 27.147 361 217 9 1 338 1 338 1.13e-34 133
MS.gene055537.t1 AT5G36180 26.957 345 221 10 106 448 24 339 1.83e-34 132
MS.gene055537.t1 AT5G36180 26.957 345 221 10 106 448 24 339 1.83e-34 132
MS.gene055537.t1 AT2G22970 30.573 314 166 9 35 323 28 314 1.36e-33 129
MS.gene055537.t1 AT2G22980 26.791 321 199 10 106 423 2 289 6.87e-30 118
MS.gene055537.t1 AT1G15000 26.056 426 254 18 48 448 37 426 2.81e-27 114
MS.gene055537.t1 AT5G36180 25.938 320 207 9 106 423 24 315 8.98e-27 110
MS.gene055537.t1 AT2G27920 27.078 421 258 17 49 432 37 445 1.57e-25 108
MS.gene055537.t1 AT5G22960 35.849 159 90 5 37 192 25 174 9.52e-24 98.6
MS.gene055537.t1 AT2G22920 27.273 286 167 10 172 448 3 256 1.46e-23 99.8
MS.gene055537.t1 AT1G73310 26.045 311 194 10 106 411 24 303 3.10e-23 100
MS.gene055537.t1 AT5G36180 25.413 303 196 9 106 406 24 298 9.84e-21 93.6
MS.gene055537.t1 AT2G27920 25.654 382 237 16 86 432 4 373 8.51e-17 82.4
MS.gene055537.t1 AT2G22960 28.369 141 94 3 308 448 51 184 3.18e-16 77.0

Find 81 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAAAACCTCTTGTTCTT+TGG 0.209048 3.2:-82080350 MS.gene055537:CDS
ACCTCTTTGTTCAAAGGTTA+TGG 0.222269 3.2:-82079208 MS.gene055537:CDS
AGAGGCAAACATGCTTTATT+TGG 0.233598 3.2:-82080128 MS.gene055537:CDS
CGTGCTATTCAAATCATTCT+TGG 0.238356 3.2:-82077288 MS.gene055537:CDS
AATTCACCATTTGGTCTAAA+TGG 0.239444 3.2:+82080270 None:intergenic
AGAGAAACAAAACACTTTAA+AGG 0.246230 3.2:+82080518 None:intergenic
GGTGGGTGGACTCAAGTTTA+TGG 0.246369 3.2:-82077383 MS.gene055537:CDS
AACAAGATATTCAATCTTAA+AGG 0.249651 3.2:-82079473 MS.gene055537:CDS
GACAAAATTGTTACCCTTCC+TGG 0.252638 3.2:-82080480 MS.gene055537:CDS
ACACTTCCTACCTGTAAATT+AGG 0.255971 3.2:+82078355 None:intergenic
AACAGAGATTTGTTTCTAAC+TGG 0.261748 3.2:-82079641 MS.gene055537:CDS
CAACAGTTCCTTACAGAGTA+TGG 0.262408 3.2:-82078142 MS.gene055537:CDS
AATAGCACGAGTGATCTTTC+AGG 0.286784 3.2:+82077302 None:intergenic
CCTCTTGTTCTTTGGCTCAA+TGG 0.297305 3.2:-82080342 MS.gene055537:CDS
CCTCTTTGTTCAAAGGTTAT+GGG 0.297500 3.2:-82079207 MS.gene055537:CDS
GAGTTAAGGTCCTAATTTAC+AGG 0.298396 3.2:-82078365 MS.gene055537:intron
ATTCAAGGGCTGAATTCTTT+TGG 0.305209 3.2:-82079326 MS.gene055537:CDS
GGACCTGGTTGTTCTTCTCT+TGG 0.328407 3.2:-82080318 MS.gene055537:CDS
GTAGGTGCATTCTCAGAAAA+TGG 0.330444 3.2:-82080294 MS.gene055537:CDS
CTTTGGCTCAATGGAGGACC+TGG 0.390446 3.2:-82080333 MS.gene055537:CDS
TCAGTTGCATATTCTAGAAC+TGG 0.396182 3.2:+82079354 None:intergenic
ACTTGTTGAACCAACGTTCC+AGG 0.404293 3.2:+82079678 None:intergenic
GCACTTCATGCAAAACTTGT+TGG 0.416149 3.2:-82078809 MS.gene055537:CDS
AAGGGACAATCTTGTATTCC+TGG 0.417025 3.2:-82079696 MS.gene055537:CDS
AAATCTCTGTTTCTATATTG+AGG 0.417674 3.2:+82079653 None:intergenic
TTTATCAATGATCCAACAAC+AGG 0.423621 3.2:+82078393 None:intergenic
AGGTTACAAACTACTTAAAC+AGG 0.431883 3.2:-82078847 MS.gene055537:CDS
CCTTACAGAGTATGGTTTGA+AGG 0.432469 3.2:-82078134 MS.gene055537:CDS
AAGATACTCACTTGAGGTTG+AGG 0.437018 3.2:+82079087 None:intergenic
ATTGATAAAAGCTGGAGTTA+AGG 0.446975 3.2:-82078379 MS.gene055537:CDS
GGTTGTTCTTCTCTTGGAGT+AGG 0.448812 3.2:-82080312 MS.gene055537:CDS
GTGCCAACACTTCCTGTTGT+TGG 0.450313 3.2:-82078405 MS.gene055537:CDS
TAAGAAAATCCAACTCCAAC+TGG 0.455371 3.2:+82080100 None:intergenic
TAAAGAAACTAGTAGATTTG+TGG 0.457756 3.2:-82079175 MS.gene055537:CDS
ATGCAACTGATTTCAATTCA+AGG 0.458582 3.2:-82079341 MS.gene055537:CDS
AGGGTGTGTCAGAAAACTTC+AGG 0.465152 3.2:+82077251 None:intergenic
CTCTCATTTGCCACAGTGAG+AGG 0.471001 3.2:-82077353 MS.gene055537:CDS
TTGTTCAAAGGTTATGGGAT+TGG 0.472351 3.2:-82079202 MS.gene055537:CDS
ATAGCCTTTCAACAATTCTC+AGG 0.473579 3.2:-82080444 MS.gene055537:CDS
AATGGACCATTTAGACCAAA+TGG 0.474826 3.2:-82080276 MS.gene055537:intron
ATCATAAGCTTTGCAAGTTG+AGG 0.475887 3.2:+82079512 None:intergenic
CTCTGTGCTGTCACAATCCA+AGG 0.476917 3.2:-82079118 MS.gene055537:CDS
AGTATGGTTTGAAGGCCAAC+AGG 0.477560 3.2:-82078126 MS.gene055537:intron
CCTTCAAACCATACTCTGTA+AGG 0.483426 3.2:+82078134 None:intergenic
GGACTATGATGTGCTTAACT+TGG 0.489157 3.2:-82078430 MS.gene055537:CDS
GATCTTTCAGGCTGTGAGAA+AGG 0.497374 3.2:+82077314 None:intergenic
TTGGAGACACCAGTTGGAGT+TGG 0.500117 3.2:-82080109 MS.gene055537:CDS
ATCTTGTATTCCTGGAACGT+TGG 0.501196 3.2:-82079688 MS.gene055537:CDS
TTTAATGGAACTTAGGTTGG+TGG 0.502079 3.2:-82077401 MS.gene055537:intron
CTTGTTCTTTGGCTCAATGG+AGG 0.503534 3.2:-82080339 MS.gene055537:CDS
CTAACTGGGGAAAGTTATGC+AGG 0.506489 3.2:-82079626 MS.gene055537:intron
GACTCAGTGATTCCACTGAC+TGG 0.508042 3.2:-82078212 MS.gene055537:CDS
TGCAACTGATTTCAATTCAA+GGG 0.511117 3.2:-82079340 MS.gene055537:CDS
TCAAATCATTCTTGGAAGGA+AGG 0.513553 3.2:-82077280 MS.gene055537:CDS
ACAGAGATTTGTTTCTAACT+GGG 0.518718 3.2:-82079640 MS.gene055537:CDS
CTTTATTTGGAGACACCAGT+TGG 0.520213 3.2:-82080115 MS.gene055537:CDS
AGTTTCACCTCTTTGTTCAA+AGG 0.523708 3.2:-82079214 MS.gene055537:CDS
GTTGGATCATTGATAAAAGC+TGG 0.524225 3.2:-82078387 MS.gene055537:CDS
TTAATGGAACTTAGGTTGGT+GGG 0.527618 3.2:-82077400 MS.gene055537:intron
ACAGTGAATGACGAGGAAAC+AGG 0.535990 3.2:-82080049 MS.gene055537:intron
TGTCAGAAAACTTCAGGTAA+AGG 0.539128 3.2:+82077257 None:intergenic
CAGAGATTTGTTTCTAACTG+GGG 0.566111 3.2:-82079639 MS.gene055537:CDS
CCCATAACCTTTGAACAAAG+AGG 0.567501 3.2:+82079207 None:intergenic
AAGCTTCTGCTTCCAGTCAG+TGG 0.568377 3.2:+82078200 None:intergenic
GATCCAACAACAGGAAGTGT+TGG 0.570777 3.2:+82078402 None:intergenic
CCATTGAGCCAAAGAACAAG+AGG 0.575023 3.2:+82080342 None:intergenic
AACTTGTTGGAGTTCGCAAG+TGG 0.581245 3.2:-82078796 MS.gene055537:CDS
CTATTCAAATCATTCTTGGA+AGG 0.581750 3.2:-82077284 MS.gene055537:CDS
AGTTAAGCACATCATAGTCC+AGG 0.589846 3.2:+82078433 None:intergenic
ATGGAACTTAGGTTGGTGGG+TGG 0.608931 3.2:-82077397 MS.gene055537:intron
TGAAATGATTGATGTATGTG+TGG 0.617494 3.2:-82078876 MS.gene055537:CDS
ATATCCTGAGAATTGTTGAA+AGG 0.621984 3.2:+82080440 None:intergenic
TGATGTATGTGTGGATGACA+AGG 0.638798 3.2:-82078867 MS.gene055537:CDS
AGGTTGAGGAGAAATAACCT+TGG 0.641885 3.2:+82079101 None:intergenic
ACTTGTTGGAGTTCGCAAGT+GGG 0.647506 3.2:-82078795 MS.gene055537:CDS
TCTCATGGCAATGACAACAA+TGG 0.663515 3.2:-82080571 None:intergenic
AAACAGGAGAGATGTGCAAG+AGG 0.664395 3.2:-82078831 MS.gene055537:CDS
ACTCCAAGAGAAGAACAACC+AGG 0.669050 3.2:+82080315 None:intergenic
ATGTGCAGCACCTCTCACTG+TGG 0.718656 3.2:+82077343 None:intergenic
TACAACAACAGTGAATGACG+AGG 0.719486 3.2:-82080056 MS.gene055537:CDS
CTTGGATTGTGACAGCACAG+AGG 0.768499 3.2:+82079119 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAACTTGTAATTTTATT+AGG - chr3.2:82079249-82079268 MS.gene055537:CDS 10.0%
!! TAATATATATATTTACCTGT+TGG + chr3.2:82079718-82079737 None:intergenic 15.0%
!! TTATTAAAAATGAACATAGT+TGG - chr3.2:82077581-82077600 MS.gene055537:intron 15.0%
!!! TATAAATTTTAATGGAACTT+AGG - chr3.2:82080418-82080437 MS.gene055537:CDS 15.0%
!!! TCATTATTATTGAATCTTTT+TGG - chr3.2:82077803-82077822 MS.gene055537:intron 15.0%
!!! TTATGTTTTTATACTTTCTT+AGG - chr3.2:82077893-82077912 MS.gene055537:intron 15.0%
!! AAAATTTATGCATGTATTTC+AGG - chr3.2:82078281-82078300 MS.gene055537:intron 20.0%
!! AACAAGATATTCAATCTTAA+AGG - chr3.2:82078353-82078372 MS.gene055537:intron 20.0%
!! AGAATAAATCAAAAAACAGA+AGG + chr3.2:82079506-82079525 None:intergenic 20.0%
!! CTTAGAATAAAAGTTAAATG+TGG - chr3.2:82079119-82079138 MS.gene055537:CDS 20.0%
!! TTAATAAGAAATTCACCATT+TGG + chr3.2:82077568-82077587 None:intergenic 20.0%
!!! ACATATTTTGTAATCTGAAA+CGG - chr3.2:82078086-82078105 MS.gene055537:intron 20.0%
!!! TTTTTTGAATTGTTAAGCAA+GGG - chr3.2:82078112-82078131 MS.gene055537:intron 20.0%
! AAAGTTAAATGTGGTTTATG+CGG - chr3.2:82079128-82079147 MS.gene055537:CDS 25.0%
! AATGAACATAGTTGGAATAA+AGG - chr3.2:82077589-82077608 MS.gene055537:intron 25.0%
! ACTCTTTGGATCTAATAAAA+GGG - chr3.2:82080142-82080161 MS.gene055537:intron 25.0%
! AGAGAAACAAAACACTTTAA+AGG + chr3.2:82077311-82077330 None:intergenic 25.0%
! TAAAGAAACTAGTAGATTTG+TGG - chr3.2:82078651-82078670 MS.gene055537:intron 25.0%
! TTATAATCTAAACATAGCCT+CGG - chr3.2:82080197-82080216 MS.gene055537:intron 25.0%
!! AGAAATCACTGTCAAAATTT+TGG - chr3.2:82079763-82079782 MS.gene055537:intron 25.0%
!! CTTTTAAATCCTACTTCTAT+TGG - chr3.2:82077855-82077874 MS.gene055537:intron 25.0%
!! GTTGGATTTTCTTATGTTAA+AGG - chr3.2:82077735-82077754 MS.gene055537:intron 25.0%
!!! AAATCTCTGTTTCTATATTG+AGG + chr3.2:82078176-82078195 None:intergenic 25.0%
!!! AATTTTAATGGAACTTAGGT+TGG - chr3.2:82080422-82080441 MS.gene055537:CDS 25.0%
!!! CATGTTTTAAAAAGCAGTAA+AGG + chr3.2:82078237-82078256 None:intergenic 25.0%
!!! CTTTTTTGAATTGTTAAGCA+AGG - chr3.2:82078111-82078130 MS.gene055537:intron 25.0%
AAGGTTATAAAACATGTCCA+CGG + chr3.2:82079210-82079229 None:intergenic 30.0%
AATTCACCATTTGGTCTAAA+TGG + chr3.2:82077559-82077578 None:intergenic 30.0%
ACCAAAATTGAATTGCAGTT+GGG - chr3.2:82078445-82078464 MS.gene055537:intron 30.0%
AGGTTACAAACTACTTAAAC+AGG - chr3.2:82078979-82078998 MS.gene055537:intron 30.0%
ATATCCTGAGAATTGTTGAA+AGG + chr3.2:82077389-82077408 None:intergenic 30.0%
ATTGAGACGTCATTTAACTA+AGG + chr3.2:82080083-82080102 None:intergenic 30.0%
ATTGATAAAAGCTGGAGTTA+AGG - chr3.2:82079447-82079466 MS.gene055537:intron 30.0%
CAAAAATTGGCTAGACAATT+AGG - chr3.2:82079653-82079672 MS.gene055537:CDS 30.0%
CACTCTTTGGATCTAATAAA+AGG - chr3.2:82080141-82080160 MS.gene055537:intron 30.0%
CAGAAGCTTAGTTCAAAAAT+TGG - chr3.2:82079640-82079659 MS.gene055537:CDS 30.0%
CAGACAATACTTCATAAAGT+CGG + chr3.2:82080027-82080046 None:intergenic 30.0%
CTATTCAAATCATTCTTGGA+AGG - chr3.2:82080542-82080561 MS.gene055537:CDS 30.0%
TACCAAAATTGAATTGCAGT+TGG - chr3.2:82078444-82078463 MS.gene055537:intron 30.0%
TCAACAGCTAGAAAATTGTA+AGG + chr3.2:82078424-82078443 None:intergenic 30.0%
TGAAATGATTGATGTATGTG+TGG - chr3.2:82078950-82078969 MS.gene055537:intron 30.0%
TTAGTTAAATGACGTCTCAA+TGG - chr3.2:82080082-82080101 MS.gene055537:CDS 30.0%
TTTATCAATGATCCAACAAC+AGG + chr3.2:82079436-82079455 None:intergenic 30.0%
! ATGCAACTGATTTCAATTCA+AGG - chr3.2:82078485-82078504 MS.gene055537:intron 30.0%
! ATTCTGTTGCTTAAACTAGA+GGG - chr3.2:82079521-82079540 MS.gene055537:CDS 30.0%
! CTTTCTGGTCACTTATAAAA+TGG + chr3.2:82079791-82079810 None:intergenic 30.0%
! TATTCTGTTGCTTAAACTAG+AGG - chr3.2:82079520-82079539 MS.gene055537:CDS 30.0%
! TGATATCAGTATGATGATGA+TGG - chr3.2:82078054-82078073 MS.gene055537:intron 30.0%
! TGCAACTGATTTCAATTCAA+GGG - chr3.2:82078486-82078505 MS.gene055537:intron 30.0%
!! AACAGAGATTTGTTTCTAAC+TGG - chr3.2:82078185-82078204 MS.gene055537:CDS 30.0%
!! ACAGAGATTTGTTTCTAACT+GGG - chr3.2:82078186-82078205 MS.gene055537:CDS 30.0%
!! ATAAAAGGGTGCTTAGATAT+AGG - chr3.2:82080156-82080175 MS.gene055537:intron 30.0%
!! TAAAAGGGTGCTTAGATATA+GGG - chr3.2:82080157-82080176 MS.gene055537:intron 30.0%
!!! AAGGTTTTAAATTGCAGTTG+TGG - chr3.2:82079080-82079099 MS.gene055537:intron 30.0%
!!! AGTTATTTTTTGTGTTGCAG+AGG - chr3.2:82077680-82077699 MS.gene055537:intron 30.0%
!!! CTACTTTTTCCAATAGAAGT+AGG + chr3.2:82077867-82077886 None:intergenic 30.0%
!!! GTTATTTTAGCTTAGTGAGA+AGG + chr3.2:82079236-82079255 None:intergenic 30.0%
AAAAAGTGGTGCAATGGTTA+AGG + chr3.2:82080343-82080362 None:intergenic 35.0%
AAAAGGATCTTTCCACTTTG+GGG + chr3.2:82079853-82079872 None:intergenic 35.0%
AAAGATCATCAGTGATCACA+TGG + chr3.2:82079353-82079372 None:intergenic 35.0%
AAGACTAAAGCCAATGGAAA+AGG + chr3.2:82079870-82079889 None:intergenic 35.0%
AATGGACCATTTAGACCAAA+TGG - chr3.2:82077550-82077569 MS.gene055537:intron 35.0%
ACACTTCCTACCTGTAAATT+AGG + chr3.2:82079474-82079493 None:intergenic 35.0%
ACCTCTTTGTTCAAAGGTTA+TGG - chr3.2:82078618-82078637 MS.gene055537:intron 35.0%
AGTTTCACCTCTTTGTTCAA+AGG - chr3.2:82078612-82078631 MS.gene055537:intron 35.0%
ATAGCCTTTCAACAATTCTC+AGG - chr3.2:82077382-82077401 MS.gene055537:CDS 35.0%
ATCATAAGCTTTGCAAGTTG+AGG + chr3.2:82078317-82078336 None:intergenic 35.0%
CCAAAATTGAATTGCAGTTG+GGG - chr3.2:82078446-82078465 MS.gene055537:intron 35.0%
CCTCTTTGTTCAAAGGTTAT+GGG - chr3.2:82078619-82078638 MS.gene055537:intron 35.0%
CGTACAATACCTCAAAAAAG+TGG + chr3.2:82080357-82080376 None:intergenic 35.0%
CTTCAAAACCTCTTGTTCTT+TGG - chr3.2:82077476-82077495 MS.gene055537:intron 35.0%
GAAAAGGATCTTTCCACTTT+GGG + chr3.2:82079854-82079873 None:intergenic 35.0%
GAGTTAAGGTCCTAATTTAC+AGG - chr3.2:82079461-82079480 MS.gene055537:intron 35.0%
GTGCATTATTATTGCTACAG+TGG - chr3.2:82079584-82079603 MS.gene055537:intron 35.0%
GTTGGATCATTGATAAAAGC+TGG - chr3.2:82079439-82079458 MS.gene055537:intron 35.0%
TAACTAAGGATAAAACTGCG+AGG + chr3.2:82080069-82080088 None:intergenic 35.0%
TAAGAAAATCCAACTCCAAC+TGG + chr3.2:82077729-82077748 None:intergenic 35.0%
TAAGGTCCTAATTTACAGGT+AGG - chr3.2:82079465-82079484 MS.gene055537:intron 35.0%
TCAAATCATTCTTGGAAGGA+AGG - chr3.2:82080546-82080565 MS.gene055537:CDS 35.0%
TCAATGAATGCATGTCATTG+TGG + chr3.2:82077642-82077661 None:intergenic 35.0%
TTGACAAAGACTAAAGCCAA+TGG + chr3.2:82079876-82079895 None:intergenic 35.0%
TTGTTCAAAGGTTATGGGAT+TGG - chr3.2:82078624-82078643 MS.gene055537:intron 35.0%
! AGAGGCAAACATGCTTTATT+TGG - chr3.2:82077698-82077717 MS.gene055537:intron 35.0%
! ATTCAAGGGCTGAATTCTTT+TGG - chr3.2:82078500-82078519 MS.gene055537:intron 35.0%
! CATTTCATTTGCTTGCTACA+AGG + chr3.2:82078937-82078956 None:intergenic 35.0%
! CGTGCTATTCAAATCATTCT+TGG - chr3.2:82080538-82080557 MS.gene055537:CDS 35.0%
! CTGATGATCTTTGTCTGTTT+TGG - chr3.2:82079361-82079380 MS.gene055537:CDS 35.0%
! GGCTTTAGTCTTTGTCAATT+GGG - chr3.2:82079878-82079897 MS.gene055537:intron 35.0%
! GTGGACATGTTTTATAACCT+TGG - chr3.2:82079209-82079228 MS.gene055537:CDS 35.0%
! TGTTGAAAGGCTATGTTTTG+AGG + chr3.2:82077376-82077395 None:intergenic 35.0%
!! ATGTGGGACTTTTTAGTGTA+CGG - chr3.2:82080230-82080249 MS.gene055537:intron 35.0%
!! CAGAGATTTGTTTCTAACTG+GGG - chr3.2:82078187-82078206 MS.gene055537:CDS 35.0%
!! CCAAAGAGTGCTTACATATA+GGG + chr3.2:82080131-82080150 None:intergenic 35.0%
!! TCAGTTGCATATTCTAGAAC+TGG + chr3.2:82078475-82078494 None:intergenic 35.0%
!! TCCAAAGAGTGCTTACATAT+AGG + chr3.2:82080132-82080151 None:intergenic 35.0%
!! TGGCTTTAGTCTTTGTCAAT+TGG - chr3.2:82079877-82079896 MS.gene055537:intron 35.0%
!! TTAATGGAACTTAGGTTGGT+GGG - chr3.2:82080426-82080445 MS.gene055537:CDS 35.0%
!! TTTAATGGAACTTAGGTTGG+TGG - chr3.2:82080425-82080444 MS.gene055537:CDS 35.0%
!!! AGAACAAGAGGTTTTGAAGA+TGG + chr3.2:82077475-82077494 None:intergenic 35.0%
AAAGGATCTTTCCACTTTGG+GGG + chr3.2:82079852-82079871 None:intergenic 40.0%
AAGATACTCACTTGAGGTTG+AGG + chr3.2:82078742-82078761 None:intergenic 40.0%
AAGGGACAATCTTGTATTCC+TGG - chr3.2:82078130-82078149 MS.gene055537:CDS 40.0%
AAGTCGGTACGAAAGATTTG+AGG + chr3.2:82080011-82080030 None:intergenic 40.0%
AATAGCACGAGTGATCTTTC+AGG + chr3.2:82080527-82080546 None:intergenic 40.0%
ACCTCAAAAAAGTGGTGCAA+TGG + chr3.2:82080349-82080368 None:intergenic 40.0%
AGGTTGAGGAGAAATAACCT+TGG + chr3.2:82078728-82078747 None:intergenic 40.0%
AGTTAAGCACATCATAGTCC+AGG + chr3.2:82079396-82079415 None:intergenic 40.0%
ATCTTGTATTCCTGGAACGT+TGG - chr3.2:82078138-82078157 MS.gene055537:CDS 40.0%
CAACAGTTCCTTACAGAGTA+TGG - chr3.2:82079684-82079703 MS.gene055537:CDS 40.0%
CAAGAGAAGATACTCACTTG+AGG + chr3.2:82078748-82078767 None:intergenic 40.0%
CAGCAAGTAAGTCATTCTCA+AGG - chr3.2:82079061-82079080 MS.gene055537:intron 40.0%
CCCATAACCTTTGAACAAAG+AGG + chr3.2:82078622-82078641 None:intergenic 40.0%
CCCTATATGTAAGCACTCTT+TGG - chr3.2:82080128-82080147 MS.gene055537:CDS 40.0%
CCTTACAGAGTATGGTTTGA+AGG - chr3.2:82079692-82079711 MS.gene055537:CDS 40.0%
CCTTCAAACCATACTCTGTA+AGG + chr3.2:82079695-82079714 None:intergenic 40.0%
CTTGTGTCAATGTCAGACAT+CGG - chr3.2:82078859-82078878 MS.gene055537:CDS 40.0%
GACAAAATTGTTACCCTTCC+TGG - chr3.2:82077346-82077365 MS.gene055537:CDS 40.0%
GACCAGTGAAGCTAAATCAT+TGG + chr3.2:82079275-82079294 None:intergenic 40.0%
GCACTTCATGCAAAACTTGT+TGG - chr3.2:82079017-82079036 MS.gene055537:intron 40.0%
GGAAAAGGATCTTTCCACTT+TGG + chr3.2:82079855-82079874 None:intergenic 40.0%
GGACTATGATGTGCTTAACT+TGG - chr3.2:82079396-82079415 MS.gene055537:intron 40.0%
GTAGGTGCATTCTCAGAAAA+TGG - chr3.2:82077532-82077551 MS.gene055537:intron 40.0%
TACAACAACAGTGAATGACG+AGG - chr3.2:82077770-82077789 MS.gene055537:intron 40.0%
TACACAGTAGATACGATCCT+AGG + chr3.2:82080380-82080399 None:intergenic 40.0%
TCATCAGTGATCACATGGAT+TGG + chr3.2:82079348-82079367 None:intergenic 40.0%
TGATGTATGTGTGGATGACA+AGG - chr3.2:82078959-82078978 MS.gene055537:intron 40.0%
! AGAGTGCTTACATATAGGGA+CGG + chr3.2:82080127-82080146 None:intergenic 40.0%
! CCCCAACTGCAATTCAATTT+TGG + chr3.2:82078449-82078468 None:intergenic 40.0%
! CTTTATTTGGAGACACCAGT+TGG - chr3.2:82077711-82077730 MS.gene055537:intron 40.0%
! GCTGAATTCTTTTGGTCACA+TGG - chr3.2:82078508-82078527 MS.gene055537:intron 40.0%
! GTGGAAAGATCCTTTTCCAT+TGG - chr3.2:82079857-82079876 MS.gene055537:intron 40.0%
!!! ACCATTGCACCACTTTTTTG+AGG - chr3.2:82080345-82080364 MS.gene055537:CDS 40.0%
!!! TTTTGAGGTATTGTACGCCT+AGG - chr3.2:82080360-82080379 MS.gene055537:CDS 40.0%
AAACAGGAGAGATGTGCAAG+AGG - chr3.2:82078995-82079014 MS.gene055537:intron 45.0%
AAGGTCGTAAAACAGCCTCT+AGG + chr3.2:82080324-82080343 None:intergenic 45.0%
ACAGTGAATGACGAGGAAAC+AGG - chr3.2:82077777-82077796 MS.gene055537:intron 45.0%
ACTCCAAGAGAAGAACAACC+AGG + chr3.2:82077514-82077533 None:intergenic 45.0%
AGTATGGTTTGAAGGCCAAC+AGG - chr3.2:82079700-82079719 MS.gene055537:CDS 45.0%
ATGTCCACGGACAACGATTT+GGG + chr3.2:82079197-82079216 None:intergenic 45.0%
CCATTGAGCCAAAGAACAAG+AGG + chr3.2:82077487-82077506 None:intergenic 45.0%
CCTCGGTTCTTACGTAATGT+GGG - chr3.2:82080214-82080233 MS.gene055537:intron 45.0%
CGTCAAAGACGAGAAGTGAA+GGG + chr3.2:82078779-82078798 None:intergenic 45.0%
CTAACTGGGGAAAGTTATGC+AGG - chr3.2:82078200-82078219 MS.gene055537:CDS 45.0%
GATCTTTCAGGCTGTGAGAA+AGG + chr3.2:82080515-82080534 None:intergenic 45.0%
GGTTGTTCTTCTCTTGGAGT+AGG - chr3.2:82077514-82077533 MS.gene055537:intron 45.0%
TAGCTTAGTGAGAAGGACCA+AGG + chr3.2:82079229-82079248 None:intergenic 45.0%
TGCTTACATATAGGGACGGA+GGG + chr3.2:82080123-82080142 None:intergenic 45.0%
TGCTTAGATATAGGGACGGA+GGG - chr3.2:82080165-82080184 MS.gene055537:intron 45.0%
TGTAGCACCTTAACCTCAAC+CGG + chr3.2:82080267-82080286 None:intergenic 45.0%
TGTCTTCGCAACCTCAAATG+AGG + chr3.2:82079154-82079173 None:intergenic 45.0%
! ACTTGTTGAACCAACGTTCC+AGG + chr3.2:82078151-82078170 None:intergenic 45.0%
! ACTTGTTGGAGTTCGCAAGT+GGG - chr3.2:82079031-82079050 MS.gene055537:intron 45.0%
! AGGGTGCTTAGATATAGGGA+CGG - chr3.2:82080161-82080180 MS.gene055537:intron 45.0%
! CCTCTTGTTCTTTGGCTCAA+TGG - chr3.2:82077484-82077503 MS.gene055537:intron 45.0%
! CGATTTGGGCTGTGACATTA+AGG + chr3.2:82079183-82079202 None:intergenic 45.0%
! CTTGTTCTTTGGCTCAATGG+AGG - chr3.2:82077487-82077506 MS.gene055537:intron 45.0%
! GATCCAACAACAGGAAGTGT+TGG + chr3.2:82079427-82079446 None:intergenic 45.0%
! GGCCAATGATTTAGCTTCAC+TGG - chr3.2:82079270-82079289 MS.gene055537:CDS 45.0%
! GTTGAGGTTAAGGTGCTACA+GGG - chr3.2:82080267-82080286 MS.gene055537:intron 45.0%
!! AACTTGTTGGAGTTCGCAAG+TGG - chr3.2:82079030-82079049 MS.gene055537:intron 45.0%
!!! CTGTTTTGGTAACAGTGTCC+TGG - chr3.2:82079375-82079394 MS.gene055537:intron 45.0%
!!! GCTATGTTTTGAGGTTGTCC+AGG + chr3.2:82077367-82077386 None:intergenic 45.0%
!!! GTTTTGAGGTTGTCCAGGAA+GGG + chr3.2:82077362-82077381 None:intergenic 45.0%
!!! TGTTTTGAGGTTGTCCAGGA+AGG + chr3.2:82077363-82077382 None:intergenic 45.0%
!!! TAAACTAATATAAATTTTAA+TGG - chr3.2:82080410-82080429 MS.gene055537:CDS 5.0%
AAGCCTTCAGTGGAGTCACT+AGG - chr3.2:82079808-82079827 MS.gene055537:intron 50.0%
AAGCTTCTGCTTCCAGTCAG+TGG + chr3.2:82079629-82079648 None:intergenic 50.0%
AGCCTTCAGTGGAGTCACTA+GGG - chr3.2:82079809-82079828 MS.gene055537:intron 50.0%
AGTGACCAGAAAGCCTTCAG+TGG - chr3.2:82079798-82079817 MS.gene055537:intron 50.0%
ATCCCTAGTGACTCCACTGA+AGG + chr3.2:82079814-82079833 None:intergenic 50.0%
CATGTCCACGGACAACGATT+TGG + chr3.2:82079198-82079217 None:intergenic 50.0%
CCCACATTACGTAAGAACCG+AGG + chr3.2:82080217-82080236 None:intergenic 50.0%
CTAGTCTCCGGTTGAGGTTA+AGG - chr3.2:82080257-82080276 MS.gene055537:intron 50.0%
CTCTCATTTGCCACAGTGAG+AGG - chr3.2:82080473-82080492 MS.gene055537:CDS 50.0%
CTCTGTGCTGTCACAATCCA+AGG - chr3.2:82078708-82078727 MS.gene055537:intron 50.0%
CTTGGATTGTGACAGCACAG+AGG + chr3.2:82078710-82078729 None:intergenic 50.0%
GACTACTCTTTCCCCCAAAG+TGG - chr3.2:82079838-82079857 MS.gene055537:intron 50.0%
GACTCAGTGATTCCACTGAC+TGG - chr3.2:82079614-82079633 MS.gene055537:intron 50.0%
GCCTCGGTTCTTACGTAATG+TGG - chr3.2:82080213-82080232 MS.gene055537:intron 50.0%
GCGTCAAAGACGAGAAGTGA+AGG + chr3.2:82078780-82078799 None:intergenic 50.0%
GGACCTGGTTGTTCTTCTCT+TGG - chr3.2:82077508-82077527 MS.gene055537:intron 50.0%
GGTTTATGCGGCCTCATTTG+AGG - chr3.2:82079140-82079159 MS.gene055537:CDS 50.0%
GTGCCAACACTTCCTGTTGT+TGG - chr3.2:82079421-82079440 MS.gene055537:intron 50.0%
GTGCTTACATATAGGGACGG+AGG + chr3.2:82080124-82080143 None:intergenic 50.0%
GTGCTTAGATATAGGGACGG+AGG - chr3.2:82080164-82080183 MS.gene055537:intron 50.0%
TGACTCCACTGAAGGCTTTC+TGG + chr3.2:82079806-82079825 None:intergenic 50.0%
TTGGAGACACCAGTTGGAGT+TGG - chr3.2:82077717-82077736 MS.gene055537:intron 50.0%
! GGTGGGTGGACTCAAGTTTA+TGG - chr3.2:82080443-82080462 MS.gene055537:CDS 50.0%
! GGTTGAGGTTAAGGTGCTAC+AGG - chr3.2:82080266-82080285 MS.gene055537:intron 50.0%
! GTGTACGGAACACTAGTCTC+CGG - chr3.2:82080245-82080264 MS.gene055537:intron 50.0%
!! ATGGAACTTAGGTTGGTGGG+TGG - chr3.2:82080429-82080448 MS.gene055537:CDS 50.0%
ACAGCCCAAATCGTTGTCCG+TGG - chr3.2:82079190-82079209 MS.gene055537:CDS 55.0%
AGAGCCTAAGGCACACACGA+GGG + chr3.2:82080301-82080320 None:intergenic 55.0%
ATGTGCAGCACCTCTCACTG+TGG + chr3.2:82080486-82080505 None:intergenic 55.0%
TGTGCCTTAGGCTCTCCTAG+AGG - chr3.2:82080306-82080325 MS.gene055537:CDS 55.0%
! ACAGCCTCTAGGAGAGCCTA+AGG + chr3.2:82080313-82080332 None:intergenic 55.0%
! CTTTGGCTCAATGGAGGACC+TGG - chr3.2:82077493-82077512 MS.gene055537:intron 55.0%
! GGAACACTAGTCTCCGGTTG+AGG - chr3.2:82080251-82080270 MS.gene055537:intron 55.0%
GAGAGCCTAAGGCACACACG+AGG + chr3.2:82080302-82080321 None:intergenic 60.0%
TCAGCCCTCGTGTGTGCCTT+AGG - chr3.2:82080294-82080313 MS.gene055537:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 82077259 82080589 82077259 ID=MS.gene055537
chr3.2 mRNA 82077259 82080589 82077259 ID=MS.gene055537.t1;Parent=MS.gene055537
chr3.2 exon 82080277 82080589 82080277 ID=MS.gene055537.t1.exon1;Parent=MS.gene055537.t1
chr3.2 CDS 82080277 82080589 82080277 ID=cds.MS.gene055537.t1;Parent=MS.gene055537.t1
chr3.2 exon 82080050 82080148 82080050 ID=MS.gene055537.t1.exon2;Parent=MS.gene055537.t1
chr3.2 CDS 82080050 82080148 82080050 ID=cds.MS.gene055537.t1;Parent=MS.gene055537.t1
chr3.2 exon 82079627 82079719 82079627 ID=MS.gene055537.t1.exon3;Parent=MS.gene055537.t1
chr3.2 CDS 82079627 82079719 82079627 ID=cds.MS.gene055537.t1;Parent=MS.gene055537.t1
chr3.2 exon 82079466 82079545 82079466 ID=MS.gene055537.t1.exon4;Parent=MS.gene055537.t1
chr3.2 CDS 82079466 82079545 82079466 ID=cds.MS.gene055537.t1;Parent=MS.gene055537.t1
chr3.2 exon 82079098 82079385 82079098 ID=MS.gene055537.t1.exon5;Parent=MS.gene055537.t1
chr3.2 CDS 82079098 82079385 82079098 ID=cds.MS.gene055537.t1;Parent=MS.gene055537.t1
chr3.2 exon 82078782 82078906 82078782 ID=MS.gene055537.t1.exon6;Parent=MS.gene055537.t1
chr3.2 CDS 82078782 82078906 82078782 ID=cds.MS.gene055537.t1;Parent=MS.gene055537.t1
chr3.2 exon 82078366 82078458 82078366 ID=MS.gene055537.t1.exon7;Parent=MS.gene055537.t1
chr3.2 CDS 82078366 82078458 82078366 ID=cds.MS.gene055537.t1;Parent=MS.gene055537.t1
chr3.2 exon 82078127 82078244 82078127 ID=MS.gene055537.t1.exon8;Parent=MS.gene055537.t1
chr3.2 CDS 82078127 82078244 82078127 ID=cds.MS.gene055537.t1;Parent=MS.gene055537.t1
chr3.2 exon 82077259 82077408 82077259 ID=MS.gene055537.t1.exon9;Parent=MS.gene055537.t1
chr3.2 CDS 82077259 82077408 82077259 ID=cds.MS.gene055537.t1;Parent=MS.gene055537.t1
Gene Sequence

>MS.gene055537

ATGGCAATGACAACAATGGCTATGTTATTTCTTCATTTGAGTTTTTTTACCTTTAAAGTGTTTTGTTTCTCTTCTCATTCTCATGCAGACAAAATTGTTACCCTTCCTGGACAACCTCAAAACATAGCCTTTCAACAATTCTCAGGATATGTCACAGTTGATAACAAAAAACACAAGTCACTTTTTTACTATTTTGCTGAATCAGAAACTGATCCATCTTCAAAACCTCTTGTTCTTTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTTGGAGTAGGTGCATTCTCAGAAAATGGACCATTTAGACCAAATGGTGAATTTCTTATTAAAAATGAACATAGTTGGAATAAAGGTATACTTTATTCTTGTCACATTCTCTTCCACAATGACATGCATTCATTGAATTTTTCTCAAGTGAATGAGTTATTTTTTGTGTTGCAGAGGCAAACATGCTTTATTTGGAGACACCAGTTGGAGTTGGATTTTCTTATGTTAAAGGTAGTTCTGCTTATACAACAACAGTGAATGACGAGGAAACAGGTATTCATTATTATTGAATCTTTTTGGTACTAAAAATGTTTCATCTTTAGAAACTTCTTTTAAATCCTACTTCTATTGGAAAAAGTAGTATATCTTATGTTTTTATACTTTCTTAGGCTTTTTAAAAGTTTAGATAAAGATAAAACAGTGATTTATTGTAAACATGTGTCTCTAACTTTTATATGAAACTTTACATTATTATTCTTCATGTCTTGTTATCTACTCAAAGTCAAACATTAACATGTTATATACTTTTGATATCAGTATGATGATGATGGTTTTATTGTACATATTTTGTAATCTGAAACGGTGCTTTTTTGAATTGTTAAGCAAGGGACAATCTTGTATTCCTGGAACGTTGGTTCAACAAGTTTCCTCAATATAGAAACAGAGATTTGTTTCTAACTGGGGAAAGTTATGCAGGTAAACTTATCACCTTTACTGCTTTTTAAAACATGTTACAGCAATCATTATTAATTTGCAAAATTTATGCATGTATTTCAGGTCATTATGTTCCTCAACTTGCAAAGCTTATGATTGAAATGAACAAAAGAAACAAGATATTCAATCTTAAAGGCATAGCTGTAAGTAATGCTTCGTTGATGATTTTTTTTTTTTTATTCCTTACAATTTTCTAGCTGTTGATACCAAAATTGAATTGCAGTTGGGGAATCCAGTTCTAGAATATGCAACTGATTTCAATTCAAGGGCTGAATTCTTTTGGTCACATGGACTAATATCAGATGCAACTTACAACATGTTCACTAGAGTGTGTAATTACTCTCGTTATGTAAGTGAGTACAATAGAGACTCAGTTTCACCTCTTTGTTCAAAGGTTATGGGATTGGTGAGTAAAGAAACTAGTAGATTTGTGGACAAATATGATGTCACACTTGATGTTTGCATTTCCTCTGTGCTGTCACAATCCAAGGTTATTTCTCCTCAACCTCAAGTGAGTATCTTCTCTTGTAGTCTTTCCCTTCACTTCTCGTCTTTGACGCACAAACACGACACTGTCACATCGACACTGATAATAGTTTGAGAAAATTGAATGTAATCACTTGTGTCAATGTCAGACATCGGCACGTGTTAAATTTCAAGTTTAGCTAATTCATTTAGATTTGTTGTGTTGTGTCCTTGTAGCAAGCAAATGAAATGATTGATGTATGTGTGGATGACAAGGTTACAAACTACTTAAACAGGAGAGATGTGCAAGAGGCACTTCATGCAAAACTTGTTGGAGTTCGCAAGTGGGATGTCTGCAGCAAGTAAGTCATTCTCAAGGTTTTAAATTGCAGTTGTGGACGCATTCTCTAATTTCTTAGAATAAAAGTTAAATGTGGTTTATGCGGCCTCATTTGAGGTTGCGAAGACATTAAAACCTTAATGTCACAGCCCAAATCGTTGTCCGTGGACATGTTTTATAACCTTGGTCCTTCTCACTAAGCTAAAATAACTTGTAATTTTATTAGGCCAATGATTTAGCTTCACTGGTCTATGAAAATTGAAAAATCAGTACTTGTCTGCTATGATTTTTTTGCTTTAACCAATCCATGTGATCACTGATGATCTTTGTCTGTTTTGGTAACAGTGTCCTGGACTATGATGTGCTTAACTTGGAAGTGCCAACACTTCCTGTTGTTGGATCATTGATAAAAGCTGGAGTTAAGGTCCTAATTTACAGGTAGGAAGTGTACAACTTTTCCTTCTGTTTTTTGATTTATTCTGTTGCTTAAACTAGAGGGTTCATACATGTTTTTTTAGTGATAAAACTAACATGACAATGTGCATTATTATTGCTACAGTGGAGATCAAGACTCAGTGATTCCACTGACTGGAAGCAGAAGCTTAGTTCAAAAATTGGCTAGACAATTAGGACTGAATACAACAGTTCCTTACAGAGTATGGTTTGAAGGCCAACAGGTAAATATATATATTAATTAAATAACGTGTTTGAATTGTTGAGAAATCACTGTCAAAATTTTGGCTCCATTTTATAAGTGACCAGAAAGCCTTCAGTGGAGTCACTAGGGATCACTGACTACTCTTTCCCCCAAAGTGGAAAGATCCTTTTCCATTGGCTTTAGTCTTTGTCAATTGGGTTCTGTGCAGAACTGTAGATTTTATTCTTTGTTTGAACTTTATTATGTCTGTATTCACAACAACAGTATAATGAAAGCATCTATTCAGTAATATCTATTTGTTTCGACCTCAAATCTTTCGTACCGACTTTATGAAGTATTGTCTGCTTTGAGTCTTGTGTAACACCTCGCAGTTTTATCCTTAGTTAAATGACGTCTCAATGGATTGAAGATAATACTCCCTCCGTCCCTATATGTAAGCACTCTTTGGATCTAATAAAAGGGTGCTTAGATATAGGGACGGAGGGAGTAGATGATTATAATCTAAACATAGCCTCGGTTCTTACGTAATGTGGGACTTTTTAGTGTACGGAACACTAGTCTCCGGTTGAGGTTAAGGTGCTACAGGGTTTTTCAGCCCTCGTGTGTGCCTTAGGCTCTCCTAGAGGCTGTTTTACGACCTTAACCATTGCACCACTTTTTTGAGGTATTGTACGCCTAGGATCGTATCTACTGTGTAGAATACATGATAAACTAATATAAATTTTAATGGAACTTAGGTTGGTGGGTGGACTCAAGTTTATGGCAATGTTCTCTCATTTGCCACAGTGAGAGGTGCTGCACATGAAGCTCCTTTCTCACAGCCTGAAAGATCACTCGTGCTATTCAAATCATTCTTGGAAGGAAGGCCTTTACCTGAAGTTTTCTGA

Protein sequence

>MS.gene055537.t1

MAMTTMAMLFLHLSFFTFKVFCFSSHSHADKIVTLPGQPQNIAFQQFSGYVTVDNKKHKSLFYYFAESETDPSSKPLVLWLNGGPGCSSLGVGAFSENGPFRPNEANMLYLETPVGVGFSYVKGSSAYTTTVNDEETARDNLVFLERWFNKFPQYRNRDLFLTGESYAGHYVPQLAKLMIEMNKRNKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDATYNMFTRVCNYSRYVSEYNRDSVSPLCSKVMGLVSKETSRFVDKYDVTLDVCISSVLSQSKVISPQPQQANEMIDVCVDDKVTNYLNRRDVQEALHAKLVGVRKWDVCSNVLDYDVLNLEVPTLPVVGSLIKAGVKVLIYSGDQDSVIPLTGSRSLVQKLARQLGLNTTVPYRVWFEGQQVGGWTQVYGNVLSFATVRGAAHEAPFSQPERSLVLFKSFLEGRPLPEVF