Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56837.t1 | XP_003591877.1 | 93.7 | 680 | 43 | 0 | 1 | 680 | 1 | 680 | 0.00E+00 | 1246.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56837.t1 | Q9SMK9 | 92.2 | 653 | 51 | 0 | 28 | 680 | 24 | 676 | 0.0e+00 | 1192.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56837.t1 | G7I515 | 93.7 | 680 | 43 | 0 | 1 | 680 | 1 | 680 | 0.0e+00 | 1246.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049227 | MS.gene56837 | 0.872091 | 4.15E-67 | -1.69E-46 |
MS.gene053143 | MS.gene56837 | 0.818159 | 2.27E-52 | -1.69E-46 |
MS.gene054585 | MS.gene56837 | 0.826868 | 2.14E-54 | -1.69E-46 |
MS.gene054824 | MS.gene56837 | 0.805134 | 1.55E-49 | -1.69E-46 |
MS.gene058015 | MS.gene56837 | 0.806818 | 6.84E-50 | -1.69E-46 |
MS.gene058649 | MS.gene56837 | 0.804436 | 2.16E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56837.t1 | MTR_1g094780 | 94.706 | 680 | 36 | 0 | 1 | 680 | 1 | 680 | 0.0 | 1335 |
MS.gene56837.t1 | MTR_1g064090 | 82.290 | 655 | 116 | 0 | 26 | 680 | 16 | 670 | 0.0 | 1134 |
MS.gene56837.t1 | MTR_7g101395 | 81.860 | 656 | 119 | 0 | 28 | 683 | 30 | 685 | 0.0 | 1129 |
MS.gene56837.t1 | MTR_7g101425 | 81.402 | 656 | 122 | 0 | 28 | 683 | 30 | 685 | 0.0 | 1123 |
MS.gene56837.t1 | MTR_2g094960 | 72.561 | 656 | 172 | 4 | 29 | 680 | 5 | 656 | 0.0 | 969 |
MS.gene56837.t1 | MTR_5g098720 | 70.291 | 653 | 192 | 2 | 29 | 680 | 16 | 667 | 0.0 | 962 |
MS.gene56837.t1 | MTR_2g095010 | 43.939 | 132 | 47 | 2 | 549 | 680 | 1 | 105 | 3.98e-28 | 112 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56837.t1 | AT2G37040 | 77.778 | 684 | 147 | 2 | 1 | 680 | 1 | 683 | 0.0 | 1114 |
MS.gene56837.t1 | AT3G53260 | 78.892 | 668 | 135 | 1 | 19 | 680 | 8 | 675 | 0.0 | 1111 |
MS.gene56837.t1 | AT3G10340 | 77.037 | 675 | 152 | 3 | 17 | 689 | 1 | 674 | 0.0 | 1085 |
MS.gene56837.t1 | AT5G04230 | 71.713 | 654 | 169 | 6 | 30 | 680 | 12 | 652 | 0.0 | 949 |
MS.gene56837.t1 | AT5G04230 | 71.277 | 658 | 169 | 7 | 30 | 680 | 12 | 656 | 0.0 | 943 |
Find 166 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATTTGGCCTTCCAATTAAA+AGG | 0.205075 | 1.2:+73435083 | None:intergenic |
CCTCAAAAGCTCCAATCTTT+TGG | 0.213487 | 1.2:+73433877 | None:intergenic |
TATTGATGTTTCAAGGAATA+TGG | 0.225643 | 1.2:-73434567 | MS.gene56837:CDS |
AATTGAGGCTGCTGCTATTA+TGG | 0.231999 | 1.2:-73434783 | MS.gene56837:CDS |
CAAAGGGTCATTGTTGTTAC+TGG | 0.232524 | 1.2:+73439626 | None:intergenic |
CTACATTCCTTGATCATATT+AGG | 0.256307 | 1.2:+73433780 | None:intergenic |
CTAAGGGCACAACCGGTTTC+CGG | 0.296842 | 1.2:+73439532 | None:intergenic |
TCAAAATCTATTGGACCTAA+TGG | 0.305142 | 1.2:-73435061 | MS.gene56837:CDS |
TGGATCAGGTTTGGCTTCAT+TGG | 0.306429 | 1.2:-73434933 | MS.gene56837:CDS |
GCATTCAGAACTTGTCCATT+AGG | 0.307197 | 1.2:+73435046 | None:intergenic |
GCTAGGGTTCAAGTTGAAAA+TGG | 0.308466 | 1.2:-73433816 | MS.gene56837:CDS |
CAACAATGACCCTTTGAATT+GGG | 0.317046 | 1.2:-73439619 | MS.gene56837:CDS |
ACTAGTGCTAAACCTTCTTT+AGG | 0.318031 | 1.2:+73434971 | None:intergenic |
CAACTAGCTGGAATTGAAAC+TGG | 0.324510 | 1.2:-73435010 | MS.gene56837:CDS |
TGCTAGCCGCAATCCAAGTT+TGG | 0.335095 | 1.2:-73434393 | MS.gene56837:CDS |
TCCACCATTGCAAAGATTCA+TGG | 0.339048 | 1.2:+73439656 | None:intergenic |
ACTCATGTCATCCACCTTCT+TGG | 0.341156 | 1.2:-73434198 | MS.gene56837:CDS |
AACCAAGATGTTAACTCTTT+AGG | 0.341255 | 1.2:-73434266 | MS.gene56837:CDS |
AAAGCTCTGTGCTTGATAAT+TGG | 0.341667 | 1.2:+73432682 | None:intergenic |
CGCAATCCAAGTTTGGATTA+CGG | 0.346277 | 1.2:-73434386 | MS.gene56837:CDS |
AGGCCAAATTCAAAATCTAT+TGG | 0.352492 | 1.2:-73435070 | MS.gene56837:CDS |
ACAACAATGACCCTTTGAAT+TGG | 0.354806 | 1.2:-73439620 | MS.gene56837:CDS |
ATTCCTTTAGCATATGTTGC+TGG | 0.359407 | 1.2:-73435106 | MS.gene56837:CDS |
TGTCTCAGCTTCTGCATTAG+AGG | 0.360021 | 1.2:+73433963 | None:intergenic |
AGTTCGTAAGAGAAACTTTA+GGG | 0.360603 | 1.2:-73433740 | MS.gene56837:CDS |
TACTGCAGTTGGATCAGGTT+TGG | 0.362782 | 1.2:-73434942 | MS.gene56837:CDS |
GCAGTGATTGTACCTCTTAA+TGG | 0.365126 | 1.2:+73435142 | None:intergenic |
ACATTGCTTCAAGGATATTC+AGG | 0.370009 | 1.2:-73435229 | MS.gene56837:CDS |
AGATGGAAGTTATTATCTTA+AGG | 0.370273 | 1.2:-73434750 | MS.gene56837:CDS |
TCCTTCTCACAAAACCTTGA+TGG | 0.371743 | 1.2:+73434053 | None:intergenic |
TGCAACAGATTTCTGAATGC+TGG | 0.371910 | 1.2:-73435331 | MS.gene56837:intron |
CCAATCACTACTAGCTTTAA+CGG | 0.372093 | 1.2:+73439419 | None:intergenic |
TACCGGCGTGGCGGTTGAAC+TGG | 0.380657 | 1.2:-73439460 | MS.gene56837:CDS |
AAGTTCGTAAGAGAAACTTT+AGG | 0.385414 | 1.2:-73433741 | MS.gene56837:CDS |
ATCCACTTATTGATGTTTCA+AGG | 0.393519 | 1.2:-73434574 | MS.gene56837:CDS |
TCAAGGAATATGGCACTTCA+TGG | 0.407244 | 1.2:-73434557 | MS.gene56837:CDS |
GTTGATCATGCATTGCAAAA+TGG | 0.407281 | 1.2:-73433933 | MS.gene56837:CDS |
ATCGCGTATCTATCTTGTTT+AGG | 0.408011 | 1.2:+73434689 | None:intergenic |
TTTCCACCTCTTTAGGCAAA+AGG | 0.408359 | 1.2:+73433841 | None:intergenic |
CATGCCTGCTCTTGTGGCTG+TGG | 0.413922 | 1.2:+73435267 | None:intergenic |
AGGAATCAGATTTGAAATCA+TGG | 0.416143 | 1.2:-73435209 | MS.gene56837:CDS |
CGGAAACCGGTTGTGCCCTT+AGG | 0.420331 | 1.2:-73439531 | MS.gene56837:CDS |
TGTGCCAAGCTATTGATCTA+AGG | 0.425341 | 1.2:-73434169 | MS.gene56837:CDS |
ACCTGATGAGTTCACTTTGA+AGG | 0.426969 | 1.2:+73439304 | None:intergenic |
CCTCGGCCGCCGTGCTAACA+TGG | 0.427923 | 1.2:+73432541 | None:intergenic |
AATGGTACTGCAGTTGGATC+AGG | 0.429438 | 1.2:-73434947 | MS.gene56837:CDS |
TTCCTTGAAACATCAATAAG+TGG | 0.432083 | 1.2:+73434572 | None:intergenic |
TTTCCACCTAAGGGCACAAC+CGG | 0.434202 | 1.2:+73439525 | None:intergenic |
CGGCTAGCAGTGAGATTTGA+AGG | 0.436480 | 1.2:+73434407 | None:intergenic |
GTGGTTGATAGTATGAATAA+AGG | 0.440659 | 1.2:-73439396 | MS.gene56837:CDS |
GGCGGTTGAACTGGCGGAAG+AGG | 0.442005 | 1.2:-73439451 | MS.gene56837:CDS |
GTATTGAAGTTCTGAACAAT+AGG | 0.446436 | 1.2:+73434334 | None:intergenic |
GAAGACATGGTGTTATGTTA+TGG | 0.450134 | 1.2:+73435164 | None:intergenic |
CGTTTAGCCATTGCTTCCAT+TGG | 0.450648 | 1.2:-73434488 | MS.gene56837:CDS |
AACCAACATGCCTGCTCTTG+TGG | 0.452957 | 1.2:+73435261 | None:intergenic |
TATGGAGTGACCACTGGGTT+TGG | 0.453303 | 1.2:-73439363 | MS.gene56837:CDS |
TGAGGTGAAGCGTATGGTAG+AGG | 0.454428 | 1.2:-73439559 | MS.gene56837:CDS |
CCGTTAAAGCTAGTAGTGAT+TGG | 0.454848 | 1.2:-73439419 | MS.gene56837:CDS |
ACACCATGTCTTCCATTAAG+AGG | 0.455708 | 1.2:-73435154 | MS.gene56837:CDS |
GTTTCAACTTATGAATCAAA+TGG | 0.458671 | 1.2:+73434819 | None:intergenic |
AGAGGTACAATCACTGCATC+AGG | 0.458933 | 1.2:-73435136 | MS.gene56837:CDS |
TGCATTGCAAAATGGTGATA+AGG | 0.460091 | 1.2:-73433925 | MS.gene56837:CDS |
ATTCTCACAGTTGGTGTCAA+TGG | 0.460157 | 1.2:-73434086 | MS.gene56837:CDS |
CCCTTCAAAGTGAACTCATC+AGG | 0.460498 | 1.2:-73439305 | MS.gene56837:intron |
CGAACATCACCGCAGTGGCT+TGG | 0.467832 | 1.2:-73434665 | MS.gene56837:CDS |
TTGAAGCCGTAATCCAAACT+TGG | 0.469165 | 1.2:+73434380 | None:intergenic |
GATTTACTCAATGTTGTTGA+AGG | 0.472171 | 1.2:-73434032 | MS.gene56837:CDS |
TTCCACCTCTTTAGGCAAAA+GGG | 0.473173 | 1.2:+73433842 | None:intergenic |
GATAGCTATGGAGTGACCAC+TGG | 0.474320 | 1.2:-73439369 | MS.gene56837:CDS |
TGGTTGATAGTATGAATAAA+GGG | 0.479080 | 1.2:-73439395 | MS.gene56837:CDS |
CGGCAGAGGGTTAGTTTGCT+AGG | 0.479887 | 1.2:-73432595 | MS.gene56837:CDS |
TTTGAGTTGCAACCTAAAGA+AGG | 0.487825 | 1.2:-73434983 | MS.gene56837:CDS |
GTTGTGCCCTTAGGTGGAAA+AGG | 0.495345 | 1.2:-73439522 | MS.gene56837:CDS |
TCCATGAATCTTTGCAATGG+TGG | 0.496445 | 1.2:-73439657 | MS.gene56837:CDS |
CCTGATGAGTTCACTTTGAA+GGG | 0.497056 | 1.2:+73439305 | None:intergenic |
AGCCTAAAGAGTTAACATCT+TGG | 0.498300 | 1.2:+73434264 | None:intergenic |
ATGCCTGCTCTTGTGGCTGT+GGG | 0.500154 | 1.2:+73435268 | None:intergenic |
CTAAAGAGGTGGAAAATGCT+AGG | 0.500407 | 1.2:-73433833 | MS.gene56837:CDS |
CGTTAAAGCTAGTAGTGATT+GGG | 0.503606 | 1.2:-73439418 | MS.gene56837:CDS |
AAATTTACTAGTTGTTCTCT+CGG | 0.506721 | 1.2:-73434897 | MS.gene56837:CDS |
ATCAAATGGTCAGTGAATTG+AGG | 0.509685 | 1.2:+73434833 | None:intergenic |
TTCAGTTCCTAATATGATCA+AGG | 0.512088 | 1.2:-73433787 | MS.gene56837:CDS |
AACAATGACCCTTTGAATTG+GGG | 0.517697 | 1.2:-73439618 | MS.gene56837:CDS |
ACCAACTGTGAGAATTCTCT+TGG | 0.519185 | 1.2:+73434094 | None:intergenic |
AGCAAACATAAGTTTACCAA+TGG | 0.521443 | 1.2:+73434472 | None:intergenic |
AACAATAGCACAAGTGGCTG+CGG | 0.522595 | 1.2:-73439496 | MS.gene56837:CDS |
AGTTTGGATTACGGCTTCAA+AGG | 0.525060 | 1.2:-73434377 | MS.gene56837:CDS |
CCATACGCTTCACCTCATCT+AGG | 0.525749 | 1.2:+73439565 | None:intergenic |
GGTAGAGGAATACCGGAAAC+CGG | 0.526167 | 1.2:-73439544 | MS.gene56837:CDS |
AAACCGGTTGTGCCCTTAGG+TGG | 0.529697 | 1.2:-73439528 | MS.gene56837:CDS |
CTAGTGAATGGTACTGCAGT+TGG | 0.530990 | 1.2:-73434953 | MS.gene56837:CDS |
TCTTGTTTAGGCTTCTGAAG+TGG | 0.531050 | 1.2:+73434701 | None:intergenic |
TTAGGGACAAGTTTGCTGAC+AGG | 0.531897 | 1.2:-73433723 | MS.gene56837:intron |
ACAAGTTCTGAATGCTAAAG+AGG | 0.536880 | 1.2:-73435038 | MS.gene56837:CDS |
AGCGTATGGTAGAGGAATAC+CGG | 0.537269 | 1.2:-73439551 | MS.gene56837:CDS |
TTGATCATATTAGGAACTGA+AGG | 0.538404 | 1.2:+73433789 | None:intergenic |
TATGGCTGCAGATTCTATGA+AGG | 0.539419 | 1.2:-73439595 | MS.gene56837:CDS |
CTTTGAACATGAGTGGTGAC+AGG | 0.539854 | 1.2:+73434302 | None:intergenic |
GAAGGTTTAGCACTAGTGAA+TGG | 0.540506 | 1.2:-73434965 | MS.gene56837:CDS |
CATGAAAAGCAGCGACGAGT+TGG | 0.541549 | 1.2:-73432646 | MS.gene56837:CDS |
ACTTCATCCTGGTCAAATTG+AGG | 0.542522 | 1.2:-73434798 | MS.gene56837:CDS |
AGAATCAACACATTGCTTCA+AGG | 0.544518 | 1.2:-73435238 | MS.gene56837:CDS |
CCTCCCACAGCCACAAGAGC+AGG | 0.545619 | 1.2:-73435271 | MS.gene56837:CDS |
AGGCCAGCAACATATGCTAA+AGG | 0.547360 | 1.2:+73435103 | None:intergenic |
TCAAATGGAGATAATAGCAA+TGG | 0.548037 | 1.2:-73439693 | MS.gene56837:CDS |
TGACCCTTTGAATTGGGGTA+TGG | 0.549794 | 1.2:-73439613 | MS.gene56837:CDS |
ATGGTGAGTTGCATCCATCA+AGG | 0.558706 | 1.2:-73434067 | MS.gene56837:CDS |
CAGCCATACCCCAATTCAAA+GGG | 0.559111 | 1.2:+73439610 | None:intergenic |
AATAAGTGGATTGTCATTCA+CGG | 0.561129 | 1.2:+73434586 | None:intergenic |
AGAGGGTATGTAGCACTGCA+AGG | 0.563580 | 1.2:+73433981 | None:intergenic |
TCTCTTACGAACTTGTACAA+TGG | 0.563790 | 1.2:+73433750 | None:intergenic |
AATTTCCAAGGTACACCGAT+TGG | 0.566709 | 1.2:-73434530 | MS.gene56837:CDS |
AAGCACAGAGCTTTCATCAC+CGG | 0.568307 | 1.2:-73432673 | MS.gene56837:CDS |
ATACACCAATCGGTGTACCT+TGG | 0.570750 | 1.2:+73434525 | None:intergenic |
TCTTCCATGAATCTTTGCAA+TGG | 0.570876 | 1.2:-73439660 | MS.gene56837:CDS |
CCTGCTCTTGTGGCTGTGGG+AGG | 0.571117 | 1.2:+73435271 | None:intergenic |
GCTCTGTGCTTGATAATTGG+TGG | 0.573650 | 1.2:+73432685 | None:intergenic |
AATAAAGGGACTGATAGCTA+TGG | 0.573860 | 1.2:-73439381 | MS.gene56837:CDS |
GCCAAGAGAATTCTCACAGT+TGG | 0.575651 | 1.2:-73434095 | MS.gene56837:CDS |
ACGCAACAAAGATGATTGAG+AGG | 0.576256 | 1.2:-73434619 | MS.gene56837:CDS |
AGGGTTAGTTTGCTAGGCGA+CGG | 0.576803 | 1.2:-73432589 | MS.gene56837:CDS |
TTATCCATCGATACACCAAT+CGG | 0.577310 | 1.2:+73434515 | None:intergenic |
CGGCGTGGCGGTTGAACTGG+CGG | 0.577849 | 1.2:-73439457 | MS.gene56837:CDS |
GCGGTTGCAACTCATAGTAC+CGG | 0.581294 | 1.2:-73439477 | MS.gene56837:CDS |
TGTGCCTTAGATCAATAGCT+TGG | 0.582659 | 1.2:+73434165 | None:intergenic |
TAAAGAGGTGGAAAATGCTA+GGG | 0.582840 | 1.2:-73433832 | MS.gene56837:CDS |
CATAAGTTGAAACTTCATCC+TGG | 0.584696 | 1.2:-73434809 | MS.gene56837:CDS |
AAGTTTACCAATGGAAGCAA+TGG | 0.586687 | 1.2:+73434481 | None:intergenic |
GATAATAGCAATGGTTGTAA+CGG | 0.587621 | 1.2:-73439684 | MS.gene56837:CDS |
GCAGCCATACCCCAATTCAA+AGG | 0.588052 | 1.2:+73439609 | None:intergenic |
TGATCATATTAGGAACTGAA+GGG | 0.589476 | 1.2:+73433790 | None:intergenic |
GTCTCAGCTTCTGCATTAGA+GGG | 0.593808 | 1.2:+73433964 | None:intergenic |
AGGTTTAACAATAGCACAAG+TGG | 0.595101 | 1.2:-73439502 | MS.gene56837:CDS |
TATTGATCTAAGGCACATTG+AGG | 0.597254 | 1.2:-73434159 | MS.gene56837:CDS |
CCTAGATGAGGTGAAGCGTA+TGG | 0.602524 | 1.2:-73439565 | MS.gene56837:CDS |
CTTCATGGAGGAAATTTCCA+AGG | 0.609850 | 1.2:-73434542 | MS.gene56837:CDS |
TACACCGATTGGTGTATCGA+TGG | 0.610433 | 1.2:-73434519 | MS.gene56837:CDS |
ATAGCTATGGAGTGACCACT+GGG | 0.616078 | 1.2:-73439368 | MS.gene56837:CDS |
GAGGGTATGTAGCACTGCAA+GGG | 0.617118 | 1.2:+73433982 | None:intergenic |
TAAAGCTAGTAGTGATTGGG+TGG | 0.624133 | 1.2:-73439415 | MS.gene56837:CDS |
GTACCTCTTAATGGAAGACA+TGG | 0.627273 | 1.2:+73435151 | None:intergenic |
CGCAACAAAGATGATTGAGA+GGG | 0.628498 | 1.2:-73434618 | MS.gene56837:CDS |
GCAGCAGCCTCAATTTGACC+AGG | 0.628904 | 1.2:+73434791 | None:intergenic |
TTGGTCTTCGAATGAACACA+AGG | 0.629277 | 1.2:-73432627 | MS.gene56837:CDS |
CGTAATCCAAACTTGGATTG+CGG | 0.630042 | 1.2:+73434387 | None:intergenic |
ATGGCTGCAGATTCTATGAA+GGG | 0.630430 | 1.2:-73439594 | MS.gene56837:CDS |
TTGGCACAATGCTACCAAGA+AGG | 0.630811 | 1.2:+73434184 | None:intergenic |
CGCCAGTTCAACCGCCACGC+CGG | 0.633173 | 1.2:+73439458 | None:intergenic |
GCACAATGCTACCAAGAAGG+TGG | 0.633770 | 1.2:+73434187 | None:intergenic |
CAAAGGAGCAGAAATTGCAA+TGG | 0.637084 | 1.2:-73434360 | MS.gene56837:CDS |
AGCCACAAGAGCAGGCATGT+TGG | 0.637350 | 1.2:-73435263 | MS.gene56837:CDS |
AACTCATAGTACCGGCGTGG+CGG | 0.639411 | 1.2:-73439469 | MS.gene56837:CDS |
GTGAATGAGATCTATAGCAA+CGG | 0.644014 | 1.2:-73434434 | MS.gene56837:CDS |
TGTCGAATCACTTCAATCTG+CGG | 0.647914 | 1.2:+73434641 | None:intergenic |
ATTGCAAAATGGTGATAAGG+AGG | 0.652869 | 1.2:-73433922 | MS.gene56837:CDS |
GAAGGGTAGTCACCTAGATG+AGG | 0.661131 | 1.2:-73439577 | MS.gene56837:CDS |
GAGTGGTGACAGGATTAGCA+AGG | 0.667400 | 1.2:+73434312 | None:intergenic |
TGCAACTCATAGTACCGGCG+TGG | 0.671857 | 1.2:-73439472 | MS.gene56837:CDS |
ATCACTACTAGCTTTAACGG+CGG | 0.674303 | 1.2:+73439422 | None:intergenic |
TTCAGCACTTTGAACATGAG+TGG | 0.675639 | 1.2:+73434295 | None:intergenic |
TCACACAGAAGAACAAAACA+AGG | 0.686755 | 1.2:-73439333 | MS.gene56837:CDS |
AGGAATATGGCACTTCATGG+AGG | 0.692048 | 1.2:-73434554 | MS.gene56837:CDS |
CGATTCGAACATCACCGCAG+TGG | 0.703444 | 1.2:-73434670 | MS.gene56837:CDS |
ATCTGCGGTCCAAGCCACTG+CGG | 0.717350 | 1.2:+73434656 | None:intergenic |
CACAGAAGAACAAAACAAGG+TGG | 0.749750 | 1.2:-73439330 | MS.gene56837:CDS |
TGAGGTTGCACCAAACCCAG+TGG | 0.771981 | 1.2:+73439353 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 73432555 | 73439724 | 73432555 | ID=MS.gene56837 |
chr1.2 | mRNA | 73432555 | 73439724 | 73432555 | ID=MS.gene56837.t1;Parent=MS.gene56837 |
chr1.2 | exon | 73439306 | 73439724 | 73439306 | ID=MS.gene56837.t1.exon1;Parent=MS.gene56837.t1 |
chr1.2 | CDS | 73439306 | 73439724 | 73439306 | ID=cds.MS.gene56837.t1;Parent=MS.gene56837.t1 |
chr1.2 | exon | 73433724 | 73435345 | 73433724 | ID=MS.gene56837.t1.exon2;Parent=MS.gene56837.t1 |
chr1.2 | CDS | 73433724 | 73435345 | 73433724 | ID=cds.MS.gene56837.t1;Parent=MS.gene56837.t1 |
chr1.2 | exon | 73432555 | 73432739 | 73432555 | ID=MS.gene56837.t1.exon3;Parent=MS.gene56837.t1 |
chr1.2 | CDS | 73432555 | 73432739 | 73432555 | ID=cds.MS.gene56837.t1;Parent=MS.gene56837.t1 |
Gene Sequence |
Protein sequence |