Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57237.t1 | XP_003589006.1 | 99.1 | 655 | 4 | 1 | 1 | 655 | 102 | 754 | 0.00E+00 | 1155.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57237.t1 | Q9LI74 | 33.5 | 859 | 328 | 14 | 28 | 649 | 130 | 982 | 7.1e-92 | 339.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57237.t1 | G7IB73 | 99.1 | 655 | 4 | 1 | 1 | 655 | 102 | 754 | 0.0e+00 | 1155.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051614 | MS.gene57237 | 0.870572 | 1.32E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57237.t1 | MTR_1g016290 | 98.931 | 655 | 5 | 1 | 1 | 655 | 102 | 754 | 0.0 | 1325 |
| MS.gene57237.t1 | MTR_5g053270 | 62.835 | 261 | 97 | 0 | 386 | 646 | 716 | 976 | 9.95e-112 | 359 |
| MS.gene57237.t1 | MTR_5g053270 | 37.288 | 236 | 85 | 6 | 27 | 199 | 126 | 361 | 4.76e-29 | 124 |
| MS.gene57237.t1 | MTR_4g087780 | 62.313 | 268 | 95 | 3 | 384 | 649 | 345 | 608 | 4.08e-110 | 345 |
| MS.gene57237.t1 | MTR_1g093850 | 62.214 | 262 | 98 | 1 | 386 | 647 | 711 | 971 | 2.13e-109 | 353 |
| MS.gene57237.t1 | MTR_1g093850 | 33.468 | 248 | 90 | 5 | 27 | 199 | 133 | 380 | 1.55e-25 | 113 |
| MS.gene57237.t1 | MTR_4g124070 | 50.545 | 275 | 136 | 0 | 372 | 646 | 280 | 554 | 3.96e-89 | 289 |
| MS.gene57237.t1 | MTR_4g124070 | 50.545 | 275 | 136 | 0 | 372 | 646 | 279 | 553 | 4.07e-89 | 289 |
| MS.gene57237.t1 | MTR_5g071840 | 49.057 | 265 | 130 | 4 | 386 | 649 | 160 | 420 | 7.43e-83 | 268 |
| MS.gene57237.t1 | MTR_5g071817 | 48.980 | 245 | 120 | 4 | 386 | 629 | 160 | 400 | 6.31e-75 | 246 |
| MS.gene57237.t1 | MTR_7g101060 | 72.308 | 65 | 12 | 2 | 54 | 113 | 61 | 124 | 7.88e-16 | 75.9 |
| MS.gene57237.t1 | MTR_0170s0030 | 41.053 | 95 | 51 | 1 | 105 | 199 | 220 | 309 | 1.86e-11 | 67.4 |
| MS.gene57237.t1 | MTR_2g100630 | 33.140 | 172 | 84 | 6 | 45 | 199 | 204 | 361 | 1.93e-11 | 67.4 |
| MS.gene57237.t1 | MTR_2g100630 | 32.941 | 170 | 87 | 5 | 45 | 199 | 163 | 320 | 2.43e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57237.t1 | AT3G25690 | 62.264 | 265 | 99 | 1 | 386 | 649 | 577 | 841 | 2.15e-109 | 350 |
| MS.gene57237.t1 | AT3G25690 | 49.573 | 117 | 55 | 1 | 83 | 199 | 111 | 223 | 8.58e-26 | 113 |
| MS.gene57237.t1 | AT3G25690 | 62.264 | 265 | 99 | 1 | 386 | 649 | 718 | 982 | 4.63e-108 | 350 |
| MS.gene57237.t1 | AT3G25690 | 34.375 | 256 | 99 | 6 | 28 | 214 | 130 | 385 | 2.24e-26 | 115 |
| MS.gene57237.t1 | AT3G25690 | 62.264 | 265 | 99 | 1 | 386 | 649 | 718 | 982 | 4.63e-108 | 350 |
| MS.gene57237.t1 | AT3G25690 | 34.375 | 256 | 99 | 6 | 28 | 214 | 130 | 385 | 2.24e-26 | 115 |
| MS.gene57237.t1 | AT3G25690 | 62.264 | 265 | 99 | 1 | 386 | 649 | 718 | 982 | 4.63e-108 | 350 |
| MS.gene57237.t1 | AT3G25690 | 34.375 | 256 | 99 | 6 | 28 | 214 | 130 | 385 | 2.24e-26 | 115 |
| MS.gene57237.t1 | AT3G25690 | 62.264 | 265 | 99 | 1 | 386 | 649 | 718 | 982 | 4.63e-108 | 350 |
| MS.gene57237.t1 | AT3G25690 | 34.375 | 256 | 99 | 6 | 28 | 214 | 130 | 385 | 2.24e-26 | 115 |
| MS.gene57237.t1 | AT3G25690 | 62.264 | 265 | 99 | 1 | 386 | 649 | 720 | 984 | 6.77e-108 | 349 |
| MS.gene57237.t1 | AT3G25690 | 34.894 | 235 | 90 | 5 | 28 | 199 | 132 | 366 | 3.10e-26 | 115 |
| MS.gene57237.t1 | AT4G18570 | 60.806 | 273 | 98 | 4 | 383 | 649 | 350 | 619 | 1.06e-103 | 329 |
| MS.gene57237.t1 | AT1G48280 | 52.256 | 266 | 127 | 0 | 381 | 646 | 274 | 539 | 1.09e-90 | 292 |
| MS.gene57237.t1 | AT4G18570 | 59.709 | 206 | 76 | 3 | 383 | 582 | 350 | 554 | 2.20e-73 | 248 |
| MS.gene57237.t1 | AT1G07120 | 46.097 | 269 | 132 | 4 | 386 | 650 | 128 | 387 | 1.86e-72 | 239 |
| MS.gene57237.t1 | AT1G07120 | 45.771 | 201 | 100 | 3 | 386 | 582 | 128 | 323 | 1.08e-48 | 173 |
Find 125 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGCCTCGGCTTTAAATT+TGG | 0.233447 | 1.4:+6061682 | None:intergenic |
| GGTGGTGGCGGAGGTGGAGG+TGG | 0.259596 | 1.4:+6061032 | None:intergenic |
| TACTTGTAGGCTTTCTTCTA+TGG | 0.262191 | 1.4:-6063033 | MS.gene57237:CDS |
| TGATATTGCTCTAAAGAAAA+TGG | 0.268432 | 1.4:-6060072 | MS.gene57237:CDS |
| ATGCTTGATAATGGAATTAT+TGG | 0.278942 | 1.4:-6059866 | MS.gene57237:CDS |
| AAAACTAGGATCAGTTAAAT+TGG | 0.291605 | 1.4:-6059493 | MS.gene57237:CDS |
| GGTGGCGGAGGTGGAGGTGG+AGG | 0.292796 | 1.4:+6061035 | None:intergenic |
| AAATGATCACTACTAGTTAT+TGG | 0.298597 | 1.4:+6061392 | None:intergenic |
| AGATCCTGCAATGGATTATA+TGG | 0.310246 | 1.4:-6059412 | MS.gene57237:CDS |
| TGAGCTGAGAAGGTTGAATA+AGG | 0.327504 | 1.4:-6063081 | MS.gene57237:CDS |
| GGAGGTGGTGGCGGAGGTGG+AGG | 0.334995 | 1.4:+6061029 | None:intergenic |
| AAGCTTGTTACAAGAGTCTA+AGG | 0.336420 | 1.4:-6063309 | MS.gene57237:CDS |
| CGAATTCACCCACCTCAAAT+AGG | 0.340683 | 1.4:+6061577 | None:intergenic |
| GAAGGTCTTGGAGGTGGATT+AGG | 0.341697 | 1.4:+6061116 | None:intergenic |
| GGCGGAGGTGGAGGTGGAGG+AGG | 0.342439 | 1.4:+6061038 | None:intergenic |
| AAATTGGATTGAATCGATTT+CGG | 0.346302 | 1.4:-6061330 | MS.gene57237:CDS |
| AATGTGTCAGCTTTCTTCTC+TGG | 0.352626 | 1.4:+6060179 | None:intergenic |
| TATTTGTTAATGCAGTTTGC+AGG | 0.371953 | 1.4:-6058717 | MS.gene57237:intron |
| AGCAATATCACAAGGTAGCC+TGG | 0.385664 | 1.4:+6060085 | None:intergenic |
| AGAAGAAGACATTCAATTAG+TGG | 0.386625 | 1.4:-6061296 | MS.gene57237:CDS |
| ACATTAAGAGAAGCAGCATT+TGG | 0.387362 | 1.4:-6060161 | MS.gene57237:CDS |
| GTAGAATGGATGCTTGATAA+TGG | 0.387727 | 1.4:-6059875 | MS.gene57237:CDS |
| AACTGATTTGTTCACGGAGT+TGG | 0.390136 | 1.4:-6063342 | MS.gene57237:CDS |
| GGGTGATTTATCATGTTCTC+AGG | 0.396815 | 1.4:-6063405 | MS.gene57237:CDS |
| CTGGCCAATCAAAATGCTTA+AGG | 0.400178 | 1.4:+6060198 | None:intergenic |
| ATAGGAGGTGGTGGCGGAGG+TGG | 0.400819 | 1.4:+6061026 | None:intergenic |
| ATTTGTTCAACAATGTGCTT+TGG | 0.404142 | 1.4:-6061159 | MS.gene57237:CDS |
| AACCTTCTACTTGTTTGCTC+AGG | 0.411065 | 1.4:+6061636 | None:intergenic |
| GAAATAGAACATGAAGGTCT+TGG | 0.415313 | 1.4:+6061104 | None:intergenic |
| AGAAACAATGCATGCATTTG+AGG | 0.415984 | 1.4:-6058682 | MS.gene57237:CDS |
| AAATGGCTTATCCGAGCAAT+TGG | 0.418046 | 1.4:-6063186 | MS.gene57237:CDS |
| TCATGAAGAGAGATTCTAGA+AGG | 0.427451 | 1.4:-6060932 | MS.gene57237:CDS |
| TAGTGCAAATAGCTTCAATT+TGG | 0.431295 | 1.4:-6061435 | MS.gene57237:CDS |
| AACAATGTGCTTTGGAGAAG+AGG | 0.433159 | 1.4:-6061151 | MS.gene57237:CDS |
| CTACGAACATCTGCAACATC+TGG | 0.434869 | 1.4:+6060879 | None:intergenic |
| CCTCTAGATGCAAAACTCAT+AGG | 0.434889 | 1.4:+6061008 | None:intergenic |
| GATGTTCGTAGCAGCATGAT+TGG | 0.434922 | 1.4:-6060867 | MS.gene57237:CDS |
| TGACTTTGTTTGAACTTCAA+TGG | 0.436133 | 1.4:+6059446 | None:intergenic |
| ATCTTCAACTGATTTGTTCA+CGG | 0.437733 | 1.4:-6063348 | MS.gene57237:CDS |
| CTCATAGGAGGTGGTGGCGG+AGG | 0.453395 | 1.4:+6061023 | None:intergenic |
| AGTTTCAAATTCCTGTAGAA+TGG | 0.456163 | 1.4:-6059889 | MS.gene57237:CDS |
| AGAAAAGGAACCTTACTTGT+AGG | 0.459753 | 1.4:-6063046 | MS.gene57237:CDS |
| ATTTGCTTTCAGAATCCATC+AGG | 0.459997 | 1.4:-6059373 | MS.gene57237:intron |
| AGGAGTTGCATATGCAGAAA+AGG | 0.464909 | 1.4:-6063061 | MS.gene57237:CDS |
| TAGCCTGGGATCATCCTTGT+AGG | 0.469351 | 1.4:+6060100 | None:intergenic |
| GGAAAGACAAGAGGAAGATA+AGG | 0.473310 | 1.4:-6063138 | MS.gene57237:CDS |
| TAGAAGAAAGCCTACAAGTA+AGG | 0.477948 | 1.4:+6063036 | None:intergenic |
| TGAAAGCAAATCTCACTCCT+TGG | 0.483345 | 1.4:+6059385 | None:intergenic |
| AGAACCATATAATCCATTGC+AGG | 0.490578 | 1.4:+6059408 | None:intergenic |
| TGGAGGAGCTAGCCTATTTG+AGG | 0.491946 | 1.4:-6061589 | MS.gene57237:CDS |
| TTCTAATAGCTCAGAGGAAG+AGG | 0.492413 | 1.4:-6061273 | MS.gene57237:CDS |
| CTTTGGAGAAGAGGGCGTTA+AGG | 0.492627 | 1.4:-6061142 | MS.gene57237:CDS |
| AAAAGAAATCGAAAAGGAAT+CGG | 0.496014 | 1.4:-6061195 | MS.gene57237:CDS |
| AATCTCTCTTCATGAGTGAA+TGG | 0.496096 | 1.4:+6060940 | None:intergenic |
| TATTTCTTAGGTGGATGAAA+GGG | 0.500018 | 1.4:-6060225 | MS.gene57237:intron |
| TGTAAATTCATTGATTAGAG+AGG | 0.500507 | 1.4:-6060566 | MS.gene57237:CDS |
| GACCTGAGCAAACAAGTAGA+AGG | 0.501020 | 1.4:-6061638 | MS.gene57237:CDS |
| GCACATTGTTGAACAAATAA+CGG | 0.506477 | 1.4:+6061164 | None:intergenic |
| AAAGAATACATGCTCAACAT+TGG | 0.509718 | 1.4:-6061537 | MS.gene57237:CDS |
| TTATCAAGCATCCATTCTAC+AGG | 0.515341 | 1.4:+6059878 | None:intergenic |
| TTATTTCTTAGGTGGATGAA+AGG | 0.515856 | 1.4:-6060226 | MS.gene57237:intron |
| CTGCTACTCACAACGGATTG+AGG | 0.520930 | 1.4:+6061494 | None:intergenic |
| ACAAACAAGCAGATTAAATG+AGG | 0.526326 | 1.4:-6061612 | MS.gene57237:CDS |
| GAACATGAAGGTCTTGGAGG+TGG | 0.528351 | 1.4:+6061110 | None:intergenic |
| TGTTGAACAAATAACGGCAT+TGG | 0.533882 | 1.4:+6061170 | None:intergenic |
| ATCAGAAGTTTCCTCCTACA+AGG | 0.542789 | 1.4:-6060114 | MS.gene57237:CDS |
| TTGAAGTTGTTGAGCTGAGA+AGG | 0.543563 | 1.4:-6063091 | MS.gene57237:CDS |
| AGGAGCTAGCCTATTTGAGG+TGG | 0.545914 | 1.4:-6061586 | MS.gene57237:CDS |
| AGCTAAGTTGAATGCTGAGT+TGG | 0.547558 | 1.4:-6063279 | MS.gene57237:CDS |
| TTGCTAGAAATAGAACATGA+AGG | 0.550243 | 1.4:+6061098 | None:intergenic |
| AAGTGGCTCGATGATGAACT+TGG | 0.556144 | 1.4:-6060496 | MS.gene57237:CDS |
| ATAGAACATGAAGGTCTTGG+AGG | 0.559160 | 1.4:+6061107 | None:intergenic |
| GCAAAACTCATAGGAGGTGG+TGG | 0.559650 | 1.4:+6061017 | None:intergenic |
| AAGCAGATTAAATGAGGTGG+AGG | 0.564100 | 1.4:-6061606 | MS.gene57237:CDS |
| TTGTTAATGCAGTTTGCAGG+AGG | 0.565222 | 1.4:-6058714 | MS.gene57237:intron |
| TGTTAATGCAGTTTGCAGGA+GGG | 0.566443 | 1.4:-6058713 | MS.gene57237:intron |
| TCTAGAAGGGATTCTTCAAG+TGG | 0.568375 | 1.4:-6060918 | MS.gene57237:CDS |
| TAGTCTGAGCAGTGATGCCT+CGG | 0.568718 | 1.4:+6061670 | None:intergenic |
| GCAATATCACAAGGTAGCCT+GGG | 0.568968 | 1.4:+6060086 | None:intergenic |
| ATGTTTAAAAGAAATCGAAA+AGG | 0.569919 | 1.4:-6061201 | MS.gene57237:CDS |
| CAATCCGTTGTGAGTAGCAG+TGG | 0.571058 | 1.4:-6061491 | MS.gene57237:CDS |
| ACAATGTGCTTTGGAGAAGA+GGG | 0.575048 | 1.4:-6061150 | MS.gene57237:CDS |
| TTTATACGCTTCTCCGCACG+AGG | 0.576497 | 1.4:-6059937 | MS.gene57237:CDS |
| TTGGATTGAATCGATTTCGG+AGG | 0.576920 | 1.4:-6061327 | MS.gene57237:CDS |
| ATTGAGTAGGAGCTGTGGAT+TGG | 0.577398 | 1.4:-6063159 | MS.gene57237:CDS |
| GTGTAGGAAGAATCAGAGTG+AGG | 0.578394 | 1.4:-6063252 | MS.gene57237:CDS |
| AACAAGCAGATTAAATGAGG+TGG | 0.579179 | 1.4:-6061609 | MS.gene57237:CDS |
| CATGAAGAGAGATTCTAGAA+GGG | 0.589895 | 1.4:-6060931 | MS.gene57237:CDS |
| ACTCAATGCAACCAATTGCT+CGG | 0.590814 | 1.4:+6063175 | None:intergenic |
| AAACTCATAGGAGGTGGTGG+CGG | 0.590815 | 1.4:+6061020 | None:intergenic |
| TCACTGTAGAATGGAACGTA+CGG | 0.598452 | 1.4:-6059960 | MS.gene57237:intron |
| AAAACGAGCACCACAAGTGG+TGG | 0.598795 | 1.4:-6060970 | MS.gene57237:CDS |
| TTCACTGATGAGAAATTGCA+AGG | 0.600289 | 1.4:-6059912 | MS.gene57237:CDS |
| AGAAGGGATTCTTCAAGTGG+AGG | 0.600617 | 1.4:-6060915 | MS.gene57237:CDS |
| GATGCAAAACTCATAGGAGG+TGG | 0.600680 | 1.4:+6061014 | None:intergenic |
| ATCTAGAGGTAACACGGCGA+TGG | 0.603006 | 1.4:-6060994 | MS.gene57237:CDS |
| CCTCCTACAAGGATGATCCC+AGG | 0.607350 | 1.4:-6060103 | MS.gene57237:CDS |
| TGTTGCCAAATTTAAAGCCG+AGG | 0.609728 | 1.4:-6061687 | MS.gene57237:CDS |
| ATGCTGAGTTGGTTGAGTGT+AGG | 0.613954 | 1.4:-6063268 | MS.gene57237:CDS |
| CCTGGGATCATCCTTGTAGG+AGG | 0.614989 | 1.4:+6060103 | None:intergenic |
| TGGATTGAATCGATTTCGGA+GGG | 0.615092 | 1.4:-6061326 | MS.gene57237:CDS |
| ATGTAGTGGCATTTGTGAAG+TGG | 0.615146 | 1.4:-6060513 | MS.gene57237:CDS |
| TGAGAACATAGATGATGTAG+TGG | 0.615178 | 1.4:-6060527 | MS.gene57237:CDS |
| TGATAATGGAATTATTGGCA+AGG | 0.615864 | 1.4:-6059861 | MS.gene57237:intron |
| CTGTGGATTGGAAAGACAAG+AGG | 0.617229 | 1.4:-6063147 | MS.gene57237:CDS |
| GAAGATTGTCTCCTATGTGT+TGG | 0.627862 | 1.4:+6063365 | None:intergenic |
| ATGGATTATATGGTTCTCCA+AGG | 0.628322 | 1.4:-6059402 | MS.gene57237:CDS |
| ATCTCCACTGCTACTCACAA+CGG | 0.634660 | 1.4:+6061487 | None:intergenic |
| TTCTTTAGAGCAATATCACA+AGG | 0.634972 | 1.4:+6060077 | None:intergenic |
| AGTTCTTTCTCTGATCAATG+TGG | 0.635972 | 1.4:-6061458 | MS.gene57237:CDS |
| AGACAAGAGGAAGATAAGGA+TGG | 0.637436 | 1.4:-6063134 | MS.gene57237:CDS |
| CTAGATGCAAAACTCATAGG+AGG | 0.640933 | 1.4:+6061011 | None:intergenic |
| CTATGTGTTGGAAAAGCATG+TGG | 0.644463 | 1.4:+6063377 | None:intergenic |
| GGAGCTAGCCTATTTGAGGT+GGG | 0.645858 | 1.4:-6061585 | MS.gene57237:CDS |
| TGGTACAGTTCCACCACTTG+TGG | 0.647569 | 1.4:+6060960 | None:intergenic |
| GTTGCATTGAGTAGGAGCTG+TGG | 0.648976 | 1.4:-6063164 | MS.gene57237:CDS |
| AGCAATTGGTTGCATTGAGT+AGG | 0.652247 | 1.4:-6063172 | MS.gene57237:CDS |
| GGTAAAACGAGCACCACAAG+TGG | 0.656149 | 1.4:-6060973 | MS.gene57237:CDS |
| CAGCAAGTAAATGTGATGAA+CGG | 0.659839 | 1.4:+6060832 | None:intergenic |
| ATTTGACAAAGATCCTGCAA+TGG | 0.660224 | 1.4:-6059421 | MS.gene57237:CDS |
| TCATCAGTGAATCCCTCGTG+CGG | 0.664925 | 1.4:+6059924 | None:intergenic |
| GATTAGAGAGGTGAACGATG+CGG | 0.673417 | 1.4:-6060554 | MS.gene57237:CDS |
| AAGGCAGATATTGAAACACA+AGG | 0.674344 | 1.4:-6060595 | MS.gene57237:CDS |
| TTATACGCTTCTCCGCACGA+GGG | 0.706325 | 1.4:-6059936 | MS.gene57237:CDS |
| TAGTGGTTCTAATAGCTCAG+AGG | 0.707483 | 1.4:-6061279 | MS.gene57237:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTAAAAAAAATATGAAAAA+AGG | - | chr1.4:6060088-6060107 | MS.gene57237:CDS | 10.0% |
| !! | AAATCCAAATTATTATACAA+GGG | - | chr1.4:6062975-6062994 | MS.gene57237:intron | 15.0% |
| !! | AGAAATAGATATTAATATTC+AGG | + | chr1.4:6061423-6061442 | None:intergenic | 15.0% |
| !! | ATATCAAGATTTGAAAAAAT+TGG | - | chr1.4:6061913-6061932 | MS.gene57237:intron | 15.0% |
| !! | ATTATATTTATATTGGTGAA+TGG | - | chr1.4:6061355-6061374 | MS.gene57237:CDS | 15.0% |
| !! | ATTCACCAATATAAATATAA+TGG | + | chr1.4:6061356-6061375 | None:intergenic | 15.0% |
| !!! | AAGAAACATATTTTTGTTAT+TGG | + | chr1.4:6062334-6062353 | None:intergenic | 15.0% |
| !!! | AATTTGGTTAATTTTTGTAT+GGG | - | chr1.4:6059087-6059106 | MS.gene57237:intron | 15.0% |
| !!! | AATTTTTTGTAGATAAAACT+AGG | - | chr1.4:6062544-6062563 | MS.gene57237:intron | 15.0% |
| !!! | AGTTAAATTGTTTTTGTATA+TGG | - | chr1.4:6059280-6059299 | MS.gene57237:intron | 15.0% |
| !!! | TAACAAAAATATGTTTCTTT+TGG | - | chr1.4:6062335-6062354 | MS.gene57237:intron | 15.0% |
| !!! | TGTTATTTATTGATCTATTA+AGG | - | chr1.4:6062402-6062421 | MS.gene57237:intron | 15.0% |
| !!! | TTGTGTATATATTATTTCTT+AGG | - | chr1.4:6061814-6061833 | MS.gene57237:intron | 15.0% |
| !! | AAAACCCTTGTATAATAATT+TGG | + | chr1.4:6062982-6063001 | None:intergenic | 20.0% |
| !! | AAATATGGCATTTAATAAGT+TGG | + | chr1.4:6061269-6061288 | None:intergenic | 20.0% |
| !! | AAATTCGACATGAAAAAATA+TGG | + | chr1.4:6061284-6061303 | None:intergenic | 20.0% |
| !! | ATAGTATCATTGACAAAAAT+TGG | - | chr1.4:6060705-6060724 | MS.gene57237:intron | 20.0% |
| !! | ATGTTTAAAAGAAATCGAAA+AGG | - | chr1.4:6060850-6060869 | MS.gene57237:CDS | 20.0% |
| !! | ATTTCTTAACATACAGATAA+AGG | - | chr1.4:6061437-6061456 | MS.gene57237:CDS | 20.0% |
| !! | CAAATCCAAATTATTATACA+AGG | - | chr1.4:6062974-6062993 | MS.gene57237:intron | 20.0% |
| !! | GCTTATTTAAATTTACCTAT+TGG | + | chr1.4:6059678-6059697 | None:intergenic | 20.0% |
| !! | TATATGCAAATTAGAATAGT+GGG | - | chr1.4:6059781-6059800 | MS.gene57237:intron | 20.0% |
| !! | TATTAGTATTCAAGATATCA+TGG | + | chr1.4:6061384-6061403 | None:intergenic | 20.0% |
| !! | TGAAGCCATTATATTTATAT+TGG | - | chr1.4:6061348-6061367 | MS.gene57237:CDS | 20.0% |
| !! | TTAGAGATAACTTATGAAAA+TGG | + | chr1.4:6059390-6059409 | None:intergenic | 20.0% |
| !! | TTATTGGATGAAAAAACAAT+TGG | + | chr1.4:6062318-6062337 | None:intergenic | 20.0% |
| !!! | ATTAGATTCAGTTTTAGTTT+TGG | + | chr1.4:6063081-6063100 | None:intergenic | 20.0% |
| !!! | CAATTTGGTTAATTTTTGTA+TGG | - | chr1.4:6059086-6059105 | MS.gene57237:intron | 20.0% |
| !!! | TATACAACTTGTTTTAACAT+TGG | - | chr1.4:6062514-6062533 | MS.gene57237:intron | 20.0% |
| !!! | TGTATATATTATTTCTTAGG+TGG | - | chr1.4:6061817-6061836 | MS.gene57237:intron | 20.0% |
| !!! | TTGTAGGAGTATTTTTTTTA+AGG | + | chr1.4:6060046-6060065 | None:intergenic | 20.0% |
| !!! | TTTAATAAGTTGGATACATA+AGG | + | chr1.4:6061259-6061278 | None:intergenic | 20.0% |
| ! | AAAACTAGGATCAGTTAAAT+TGG | - | chr1.4:6062558-6062577 | MS.gene57237:intron | 25.0% |
| ! | AAAAGAAATCGAAAAGGAAT+CGG | - | chr1.4:6060856-6060875 | MS.gene57237:CDS | 25.0% |
| ! | AAATGATCACTACTAGTTAT+TGG | + | chr1.4:6060662-6060681 | None:intergenic | 25.0% |
| ! | AGATACTGAAGTATATTATG+TGG | + | chr1.4:6062710-6062729 | None:intergenic | 25.0% |
| ! | ATAAATAACTGTAAGCTTGT+AGG | + | chr1.4:6060062-6060081 | None:intergenic | 25.0% |
| ! | ATACACTAACCTAAGTTAAA+TGG | + | chr1.4:6060220-6060239 | None:intergenic | 25.0% |
| ! | ATTCTACAAAGCGAAAAAAA+AGG | + | chr1.4:6059941-6059960 | None:intergenic | 25.0% |
| ! | CACATATTATAATTCTGTGA+TGG | + | chr1.4:6061667-6061686 | None:intergenic | 25.0% |
| ! | GATACTGAAGTATATTATGT+GGG | + | chr1.4:6062709-6062728 | None:intergenic | 25.0% |
| ! | GTATATGCAAATTAGAATAG+TGG | - | chr1.4:6059780-6059799 | MS.gene57237:intron | 25.0% |
| ! | TACAAGCTTACAGTTATTTA+TGG | - | chr1.4:6060061-6060080 | MS.gene57237:CDS | 25.0% |
| ! | TAGATTCATTACTAAGCTTA+TGG | - | chr1.4:6059856-6059875 | MS.gene57237:intron | 25.0% |
| ! | TTAATAACAAAGACAGATTC+AGG | + | chr1.4:6063285-6063304 | None:intergenic | 25.0% |
| ! | TTGTTAGAAGAAGAGAAAAA+TGG | - | chr1.4:6058848-6058867 | MS.gene57237:intron | 25.0% |
| ! | TTGTTTGGATAAACAACTTA+GGG | - | chr1.4:6059166-6059185 | MS.gene57237:intron | 25.0% |
| ! | TTTGTTTGGATAAACAACTT+AGG | - | chr1.4:6059165-6059184 | MS.gene57237:intron | 25.0% |
| !! | AAATTGGATTGAATCGATTT+CGG | - | chr1.4:6060721-6060740 | MS.gene57237:intron | 25.0% |
| !! | ATAGGACATGTTTATTTCTT+AGG | + | chr1.4:6062882-6062901 | None:intergenic | 25.0% |
| !! | ATCATAAAAGCACAATATGA+AGG | + | chr1.4:6060328-6060347 | None:intergenic | 25.0% |
| !! | GGCTAAAAAGTATATGAAAA+GGG | - | chr1.4:6062579-6062598 | MS.gene57237:intron | 25.0% |
| !! | TGGCTAAAAAGTATATGAAA+AGG | - | chr1.4:6062578-6062597 | MS.gene57237:intron | 25.0% |
| !! | TGTAAATTCATTGATTAGAG+AGG | - | chr1.4:6061485-6061504 | MS.gene57237:CDS | 25.0% |
| !!! | ATGCTTGATAATGGAATTAT+TGG | - | chr1.4:6062185-6062204 | MS.gene57237:intron | 25.0% |
| !!! | GACACAATTTTTTTTCTCAT+GGG | - | chr1.4:6059109-6059128 | MS.gene57237:intron | 25.0% |
| !!! | TGATATTGCTCTAAAGAAAA+TGG | - | chr1.4:6061979-6061998 | MS.gene57237:intron | 25.0% |
| !!! | TTATAATTCTGTGATGGATA+AGG | + | chr1.4:6061661-6061680 | None:intergenic | 25.0% |
| AAAGAATACATGCTCAACAT+TGG | - | chr1.4:6060514-6060533 | MS.gene57237:CDS | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | + | chr1.4:6059192-6059211 | None:intergenic | 30.0% | |
| ACAAACAAGCAGATTAAATG+AGG | - | chr1.4:6060439-6060458 | MS.gene57237:intron | 30.0% | |
| ACCAAAATATTGCATTCACA+TGG | - | chr1.4:6061317-6061336 | MS.gene57237:CDS | 30.0% | |
| AGAAGAAGACATTCAATTAG+TGG | - | chr1.4:6060755-6060774 | MS.gene57237:intron | 30.0% | |
| AGCACAATATGAAGGAAAAA+AGG | + | chr1.4:6060320-6060339 | None:intergenic | 30.0% | |
| AGTTTCAAATTCCTGTAGAA+TGG | - | chr1.4:6062162-6062181 | MS.gene57237:intron | 30.0% | |
| ATTCAGGATGTTCATGAAAT+AGG | + | chr1.4:6061407-6061426 | None:intergenic | 30.0% | |
| ATTCATTACTAAGCTTATGG+AGG | - | chr1.4:6059859-6059878 | MS.gene57237:intron | 30.0% | |
| ATTGGCAAGGTATACTATAA+TGG | - | chr1.4:6062203-6062222 | MS.gene57237:intron | 30.0% | |
| ATTTGTTCAACAATGTGCTT+TGG | - | chr1.4:6060892-6060911 | MS.gene57237:CDS | 30.0% | |
| GCACATTGTTGAACAAATAA+CGG | + | chr1.4:6060890-6060909 | None:intergenic | 30.0% | |
| TAAAAGCTACAAGCTATGTT+AGG | - | chr1.4:6059316-6059335 | MS.gene57237:intron | 30.0% | |
| TAGTGCAAATAGCTTCAATT+TGG | - | chr1.4:6060616-6060635 | MS.gene57237:intron | 30.0% | |
| TATGCACAAAGATACTTACA+AGG | + | chr1.4:6061584-6061603 | None:intergenic | 30.0% | |
| TATTTCTTAGGTGGATGAAA+GGG | - | chr1.4:6061826-6061845 | MS.gene57237:intron | 30.0% | |
| TCCTAAACTAATAATCTCAC+AGG | - | chr1.4:6059644-6059663 | MS.gene57237:intron | 30.0% | |
| TGATACAGTAAGTCTTTACA+TGG | + | chr1.4:6061629-6061648 | None:intergenic | 30.0% | |
| TGATCTATTAAGGATTATGC+TGG | - | chr1.4:6062412-6062431 | MS.gene57237:intron | 30.0% | |
| TGATTCTTCTTGATGCAATT+TGG | + | chr1.4:6063141-6063160 | None:intergenic | 30.0% | |
| TGGAATAGAAGATACGAATA+GGG | - | chr1.4:6059141-6059160 | MS.gene57237:intron | 30.0% | |
| TTGCTAGAAATAGAACATGA+AGG | + | chr1.4:6060956-6060975 | None:intergenic | 30.0% | |
| TTGGAATAGAAGATACGAAT+AGG | - | chr1.4:6059140-6059159 | MS.gene57237:intron | 30.0% | |
| ! | ACCTGTGAGATTATTAGTTT+AGG | + | chr1.4:6059648-6059667 | None:intergenic | 30.0% |
| ! | ATCTGAGATTGCTTCTTTAT+AGG | - | chr1.4:6062488-6062507 | MS.gene57237:intron | 30.0% |
| ! | CAGAGGTAATTTTTGCAATT+TGG | - | chr1.4:6059071-6059090 | MS.gene57237:intron | 30.0% |
| ! | GAAGAAACATCGATTAACAA+TGG | + | chr1.4:6062759-6062778 | None:intergenic | 30.0% |
| ! | GATTCAGGAATTTTATGTTG+TGG | + | chr1.4:6063270-6063289 | None:intergenic | 30.0% |
| ! | GTTTTTCCTATCAACTCTTT+AGG | + | chr1.4:6062377-6062396 | None:intergenic | 30.0% |
| ! | TATTAGTTTAGGAGAGCTTA+TGG | + | chr1.4:6059637-6059656 | None:intergenic | 30.0% |
| ! | TATTTGTTAATGCAGTTTGC+AGG | - | chr1.4:6063334-6063353 | MS.gene57237:CDS | 30.0% |
| ! | TGACTTTGTTTGAACTTCAA+TGG | + | chr1.4:6062608-6062627 | None:intergenic | 30.0% |
| ! | TGTTTATTTCTTAGGCTGTT+CGG | + | chr1.4:6062874-6062893 | None:intergenic | 30.0% |
| ! | TTATTTCTTAGGTGGATGAA+AGG | - | chr1.4:6061825-6061844 | MS.gene57237:intron | 30.0% |
| ! | TTCTAATTTGCATATACACC+TGG | + | chr1.4:6059777-6059796 | None:intergenic | 30.0% |
| ! | TTGTTTCCTAAAGAGTTGAT+AGG | - | chr1.4:6062368-6062387 | MS.gene57237:intron | 30.0% |
| !! | ATCTTCAACTGATTTGTTCA+CGG | - | chr1.4:6058703-6058722 | MS.gene57237:CDS | 30.0% |
| !! | GATCAATTTCTAGCTTGTAA+TGG | - | chr1.4:6059990-6060009 | MS.gene57237:intron | 30.0% |
| !! | TGATAATGGAATTATTGGCA+AGG | - | chr1.4:6062190-6062209 | MS.gene57237:intron | 30.0% |
| !! | TTCTTTAGAGCAATATCACA+AGG | + | chr1.4:6061977-6061996 | None:intergenic | 30.0% |
| !!! | AGTCGCAGTTTAGTTTTTTT+TGG | - | chr1.4:6063192-6063211 | MS.gene57237:CDS | 30.0% |
| !!! | CAGTTTAGTTTTTTTTGGTG+CGG | - | chr1.4:6063197-6063216 | MS.gene57237:CDS | 30.0% |
| !!! | GGACACAATTTTTTTTCTCA+TGG | - | chr1.4:6059108-6059127 | MS.gene57237:intron | 30.0% |
| !!! | TTTTTGAAGTTCCTAGAAGA+CGG | + | chr1.4:6062456-6062475 | None:intergenic | 30.0% |
| AACAAGCAGATTAAATGAGG+TGG | - | chr1.4:6060442-6060461 | MS.gene57237:intron | 35.0% | |
| AAGGCAGATATTGAAACACA+AGG | - | chr1.4:6061456-6061475 | MS.gene57237:CDS | 35.0% | |
| AATCTCTCTTCATGAGTGAA+TGG | + | chr1.4:6061114-6061133 | None:intergenic | 35.0% | |
| ACATTAAGAGAAGCAGCATT+TGG | - | chr1.4:6061890-6061909 | MS.gene57237:intron | 35.0% | |
| ACCTAAGTTAAATGGCAGTA+TGG | + | chr1.4:6060212-6060231 | None:intergenic | 35.0% | |
| AGAAAAGGAACCTTACTTGT+AGG | - | chr1.4:6059005-6059024 | MS.gene57237:intron | 35.0% | |
| AGAAACAATGCATGCATTTG+AGG | - | chr1.4:6063369-6063388 | MS.gene57237:CDS | 35.0% | |
| AGTTCTTTCTCTGATCAATG+TGG | - | chr1.4:6060593-6060612 | MS.gene57237:CDS | 35.0% | |
| ATTATGTGGGAAATACCTGA+TGG | + | chr1.4:6062696-6062715 | None:intergenic | 35.0% | |
| ATTTGCAGCTTATAGCACAA+GGG | - | chr1.4:6059209-6059228 | MS.gene57237:intron | 35.0% | |
| ATTTGCTTTCAGAATCCATC+AGG | - | chr1.4:6062678-6062697 | MS.gene57237:intron | 35.0% | |
| CAGCAAGTAAATGTGATGAA+CGG | + | chr1.4:6061222-6061241 | None:intergenic | 35.0% | |
| GAAATAGAACATGAAGGTCT+TGG | + | chr1.4:6060950-6060969 | None:intergenic | 35.0% | |
| GGGCAGATCTACATTATTAT+AGG | - | chr1.4:6062916-6062935 | MS.gene57237:intron | 35.0% | |
| GTAGAATGGATGCTTGATAA+TGG | - | chr1.4:6062176-6062195 | MS.gene57237:intron | 35.0% | |
| GTTCATGGTTCAGTTAAAGT+AGG | - | chr1.4:6063017-6063036 | MS.gene57237:CDS | 35.0% | |
| GTTTGTGTTTCACTGTAGAA+TGG | - | chr1.4:6062082-6062101 | MS.gene57237:intron | 35.0% | |
| TAATAATGTAGATCTGCCCT+TGG | + | chr1.4:6062915-6062934 | None:intergenic | 35.0% | |
| TACTTGTAGGCTTTCTTCTA+TGG | - | chr1.4:6059018-6059037 | MS.gene57237:intron | 35.0% | |
| TAGAAGAAAGCCTACAAGTA+AGG | + | chr1.4:6059018-6059037 | None:intergenic | 35.0% | |
| TATTTGCAGCTTATAGCACA+AGG | - | chr1.4:6059208-6059227 | MS.gene57237:intron | 35.0% | |
| TCATGAAGAGAGATTCTAGA+AGG | - | chr1.4:6061119-6061138 | MS.gene57237:CDS | 35.0% | |
| TGAGAACATAGATGATGTAG+TGG | - | chr1.4:6061524-6061543 | MS.gene57237:CDS | 35.0% | |
| TGTTGAACAAATAACGGCAT+TGG | + | chr1.4:6060884-6060903 | None:intergenic | 35.0% | |
| TTATCAAGCATCCATTCTAC+AGG | + | chr1.4:6062176-6062195 | None:intergenic | 35.0% | |
| TTCACTGATGAGAAATTGCA+AGG | - | chr1.4:6062139-6062158 | MS.gene57237:intron | 35.0% | |
| ! | AGGAATTTTATGTTGTGGCT+AGG | + | chr1.4:6063265-6063284 | None:intergenic | 35.0% |
| ! | ATGGATTATATGGTTCTCCA+AGG | - | chr1.4:6062649-6062668 | MS.gene57237:intron | 35.0% |
| ! | CATGAAGAGAGATTCTAGAA+GGG | - | chr1.4:6061120-6061139 | MS.gene57237:CDS | 35.0% |
| ! | GAAACATCGATTAACAATGG+AGG | + | chr1.4:6062756-6062775 | None:intergenic | 35.0% |
| ! | GCCATGTGAATGCAATATTT+TGG | + | chr1.4:6061321-6061340 | None:intergenic | 35.0% |
| ! | TCCATACTGCCATTTAACTT+AGG | - | chr1.4:6060208-6060227 | MS.gene57237:CDS | 35.0% |
| ! | TTGTTCTGACAACTTTTCAG+AGG | - | chr1.4:6059054-6059073 | MS.gene57237:intron | 35.0% |
| ! | TTTTGCATCTAGAGGTAACA+CGG | - | chr1.4:6061051-6061070 | MS.gene57237:CDS | 35.0% |
| !! | AAGCTTGTTACAAGAGTCTA+AGG | - | chr1.4:6058742-6058761 | MS.gene57237:intron | 35.0% |
| !! | CTGTCCTTAAGCATTTTGAT+TGG | - | chr1.4:6061849-6061868 | MS.gene57237:intron | 35.0% |
| !! | CTTTGTCCATGCTTTTAAGT+TGG | - | chr1.4:6062728-6062747 | MS.gene57237:intron | 35.0% |
| !! | TCCTATTGAGTATTGACCAA+GGG | - | chr1.4:6062896-6062915 | MS.gene57237:intron | 35.0% |
| !! | TGGCATTGATGAATATGTGA+AGG | - | chr1.4:6062223-6062242 | MS.gene57237:intron | 35.0% |
| !!! | CTAGTTATTGGCCACTTTTT+CGG | + | chr1.4:6060650-6060669 | None:intergenic | 35.0% |
| !!! | TTAGTTTTTTTTGGTGCGGT+TGG | - | chr1.4:6063201-6063220 | MS.gene57237:CDS | 35.0% |
| !!! | TTTTTTTTCTCATGGGCTGT+TGG | - | chr1.4:6059116-6059135 | MS.gene57237:intron | 35.0% |
| AAATGGCTTATCCGAGCAAT+TGG | - | chr1.4:6058865-6058884 | MS.gene57237:intron | 40.0% | |
| AACCTTCTACTTGTTTGCTC+AGG | + | chr1.4:6060418-6060437 | None:intergenic | 40.0% | |
| AAGCAGATTAAATGAGGTGG+AGG | - | chr1.4:6060445-6060464 | MS.gene57237:intron | 40.0% | |
| AATGTGTCAGCTTTCTTCTC+TGG | + | chr1.4:6061875-6061894 | None:intergenic | 40.0% | |
| ACCTACGATTGTTCACGAAT+CGG | - | chr1.4:6062949-6062968 | MS.gene57237:intron | 40.0% | |
| ACTCAATGCAACCAATTGCT+CGG | + | chr1.4:6058879-6058898 | None:intergenic | 40.0% | |
| ACTGAACCATGAACAATCCT+AGG | + | chr1.4:6063011-6063030 | None:intergenic | 40.0% | |
| AGACAAGAGGAAGATAAGGA+TGG | - | chr1.4:6058917-6058936 | MS.gene57237:intron | 40.0% | |
| AGCAATTGGTTGCATTGAGT+AGG | - | chr1.4:6058879-6058898 | MS.gene57237:intron | 40.0% | |
| AGCTAATCCAAACAATTCCC+AGG | - | chr1.4:6059695-6059714 | MS.gene57237:intron | 40.0% | |
| AGCTAGAAATTGATCGAAGC+TGG | + | chr1.4:6059985-6060004 | None:intergenic | 40.0% | |
| AGGAGTTGCATATGCAGAAA+AGG | - | chr1.4:6058990-6059009 | MS.gene57237:intron | 40.0% | |
| ATAAGCGTGCACTTGATCAA+GGG | + | chr1.4:6059468-6059487 | None:intergenic | 40.0% | |
| ATAGAACATGAAGGTCTTGG+AGG | + | chr1.4:6060947-6060966 | None:intergenic | 40.0% | |
| ATCAGAAGTTTCCTCCTACA+AGG | - | chr1.4:6061937-6061956 | MS.gene57237:intron | 40.0% | |
| ATGTAGTGGCATTTGTGAAG+TGG | - | chr1.4:6061538-6061557 | MS.gene57237:CDS | 40.0% | |
| CCTCTAGATGCAAAACTCAT+AGG | + | chr1.4:6061046-6061065 | None:intergenic | 40.0% | |
| CTAGATGCAAAACTCATAGG+AGG | + | chr1.4:6061043-6061062 | None:intergenic | 40.0% | |
| CTGGCCAATCAAAATGCTTA+AGG | + | chr1.4:6061856-6061875 | None:intergenic | 40.0% | |
| GAAGATTGTCTCCTATGTGT+TGG | + | chr1.4:6058689-6058708 | None:intergenic | 40.0% | |
| GCTAGAAATTGATCGAAGCT+GGG | + | chr1.4:6059984-6060003 | None:intergenic | 40.0% | |
| GGAAAGACAAGAGGAAGATA+AGG | - | chr1.4:6058913-6058932 | MS.gene57237:intron | 40.0% | |
| GGGTGATTTATCATGTTCTC+AGG | - | chr1.4:6058646-6058665 | MS.gene57237:CDS | 40.0% | |
| TAAACAACTTAGGGCCTGTT+TGG | - | chr1.4:6059175-6059194 | MS.gene57237:intron | 40.0% | |
| TATAAGCGTGCACTTGATCA+AGG | + | chr1.4:6059469-6059488 | None:intergenic | 40.0% | |
| TCACAGGTACTTATGCCAAT+AGG | - | chr1.4:6059660-6059679 | MS.gene57237:intron | 40.0% | |
| TCACTGTAGAATGGAACGTA+CGG | - | chr1.4:6062091-6062110 | MS.gene57237:intron | 40.0% | |
| TCTAGAAGGGATTCTTCAAG+TGG | - | chr1.4:6061133-6061152 | MS.gene57237:CDS | 40.0% | |
| TGAAAGCAAATCTCACTCCT+TGG | + | chr1.4:6062669-6062688 | None:intergenic | 40.0% | |
| TGAGCTGAGAAGGTTGAATA+AGG | - | chr1.4:6058970-6058989 | MS.gene57237:intron | 40.0% | |
| TGGTTAAGAAGCCGAAAAAG+TGG | - | chr1.4:6060636-6060655 | MS.gene57237:intron | 40.0% | |
| TGTTAATGCAGTTTGCAGGA+GGG | - | chr1.4:6063338-6063357 | MS.gene57237:CDS | 40.0% | |
| TGTTGCATTACTATGAGAGC+AGG | - | chr1.4:6062267-6062286 | MS.gene57237:intron | 40.0% | |
| TGTTGTTGCAAACAGTTTCC+AGG | - | chr1.4:6059756-6059775 | MS.gene57237:intron | 40.0% | |
| TTCTAATAGCTCAGAGGAAG+AGG | - | chr1.4:6060778-6060797 | MS.gene57237:intron | 40.0% | |
| TTGAAGTTGTTGAGCTGAGA+AGG | - | chr1.4:6058960-6058979 | MS.gene57237:intron | 40.0% | |
| TTGTTAATGCAGTTTGCAGG+AGG | - | chr1.4:6063337-6063356 | MS.gene57237:CDS | 40.0% | |
| ! | AAGCCTTATCCCACTAAGTA+GGG | + | chr1.4:6059730-6059749 | None:intergenic | 40.0% |
| ! | AGCTAAGTTGAATGCTGAGT+TGG | - | chr1.4:6058772-6058791 | MS.gene57237:intron | 40.0% |
| ! | CACATGCTTTTCCAACACAT+AGG | - | chr1.4:6058675-6058694 | MS.gene57237:CDS | 40.0% |
| ! | CCTATGAGTTTTGCATCTAG+AGG | - | chr1.4:6061043-6061062 | MS.gene57237:CDS | 40.0% |
| ! | CTATGTGTTGGAAAAGCATG+TGG | + | chr1.4:6058677-6058696 | None:intergenic | 40.0% |
| ! | CTGTTCGGTGATTCTAGAAA+AGG | + | chr1.4:6062859-6062878 | None:intergenic | 40.0% |
| ! | TGGATTGAATCGATTTCGGA+GGG | - | chr1.4:6060725-6060744 | MS.gene57237:intron | 40.0% |
| ! | TGTTGCCAAATTTAAAGCCG+AGG | - | chr1.4:6060364-6060383 | MS.gene57237:intron | 40.0% |
| ! | TTGGATTGAATCGATTTCGG+AGG | - | chr1.4:6060724-6060743 | MS.gene57237:intron | 40.0% |
| !! | AACAATGTGCTTTGGAGAAG+AGG | - | chr1.4:6060900-6060919 | MS.gene57237:CDS | 40.0% |
| !! | AACTGATTTGTTCACGGAGT+TGG | - | chr1.4:6058709-6058728 | MS.gene57237:intron | 40.0% |
| !! | ACAATGTGCTTTGGAGAAGA+GGG | - | chr1.4:6060901-6060920 | MS.gene57237:CDS | 40.0% |
| !! | GATACGAATAGGGCTTTGTT+TGG | - | chr1.4:6059151-6059170 | MS.gene57237:intron | 40.0% |
| !! | GTCCTATTGAGTATTGACCA+AGG | - | chr1.4:6062895-6062914 | MS.gene57237:intron | 40.0% |
| !! | TAGTGGTTCTAATAGCTCAG+AGG | - | chr1.4:6060772-6060791 | MS.gene57237:intron | 40.0% |
| !! | TGATGCCTCGGCTTTAAATT+TGG | + | chr1.4:6060372-6060391 | None:intergenic | 40.0% |
| !!! | TTTTGGTGCGGTTGGTTTAA+CGG | - | chr1.4:6063209-6063228 | MS.gene57237:CDS | 40.0% |
| AAGTGGCTCGATGATGAACT+TGG | - | chr1.4:6061555-6061574 | MS.gene57237:CDS | 45.0% | |
| AGAAGGGATTCTTCAAGTGG+AGG | - | chr1.4:6061136-6061155 | MS.gene57237:CDS | 45.0% | |
| AGCAATATCACAAGGTAGCC+TGG | + | chr1.4:6061969-6061988 | None:intergenic | 45.0% | |
| AGTTCCTAGAAGACGGTCAT+AGG | + | chr1.4:6062449-6062468 | None:intergenic | 45.0% | |
| ATCTCCACTGCTACTCACAA+CGG | + | chr1.4:6060567-6060586 | None:intergenic | 45.0% | |
| ATTGAGTAGGAGCTGTGGAT+TGG | - | chr1.4:6058892-6058911 | MS.gene57237:intron | 45.0% | |
| CGAATTCACCCACCTCAAAT+AGG | + | chr1.4:6060477-6060496 | None:intergenic | 45.0% | |
| CTACGAACATCTGCAACATC+TGG | + | chr1.4:6061175-6061194 | None:intergenic | 45.0% | |
| CTACTTAGTGGGATAAGGCT+TGG | - | chr1.4:6059729-6059748 | MS.gene57237:intron | 45.0% | |
| CTTATCCCACTAAGTAGGGT+CGG | + | chr1.4:6059726-6059745 | None:intergenic | 45.0% | |
| GACCTGAGCAAACAAGTAGA+AGG | - | chr1.4:6060413-6060432 | MS.gene57237:intron | 45.0% | |
| GATGCAAAACTCATAGGAGG+TGG | + | chr1.4:6061040-6061059 | None:intergenic | 45.0% | |
| GATGTTCGTAGCAGCATGAT+TGG | - | chr1.4:6061184-6061203 | MS.gene57237:CDS | 45.0% | |
| GATTAGAGAGGTGAACGATG+CGG | - | chr1.4:6061497-6061516 | MS.gene57237:CDS | 45.0% | |
| GCAATATCACAAGGTAGCCT+GGG | + | chr1.4:6061968-6061987 | None:intergenic | 45.0% | |
| GCCCTTGGTCAATACTCAAT+AGG | + | chr1.4:6062900-6062919 | None:intergenic | 45.0% | |
| GTATCCTATGACCGTCTTCT+AGG | - | chr1.4:6062442-6062461 | MS.gene57237:intron | 45.0% | |
| GTGTAGGAAGAATCAGAGTG+AGG | - | chr1.4:6058799-6058818 | MS.gene57237:intron | 45.0% | |
| TTCGTGAACAATCGTAGGTG+AGG | + | chr1.4:6062948-6062967 | None:intergenic | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+AGG | + | chr1.4:6059731-6059750 | None:intergenic | 45.0% |
| ! | CACTTGATCAAGGGCATGTT+TGG | + | chr1.4:6059459-6059478 | None:intergenic | 45.0% |
| ! | CGGTGATTCTAGAAAAGGTC+CGG | + | chr1.4:6062854-6062873 | None:intergenic | 45.0% |
| ! | GAGGCACCAACTTAAAAGCA+TGG | + | chr1.4:6062737-6062756 | None:intergenic | 45.0% |
| ! | GATCAAGGGCATGTTTGGAT+TGG | + | chr1.4:6059454-6059473 | None:intergenic | 45.0% |
| ! | TTTCTCATGGGCTGTTGGAT+TGG | - | chr1.4:6059121-6059140 | MS.gene57237:intron | 45.0% |
| !! | ACCGATTCGTGAACAATCGT+AGG | + | chr1.4:6062953-6062972 | None:intergenic | 45.0% |
| !! | ATGCTGAGTTGGTTGAGTGT+AGG | - | chr1.4:6058783-6058802 | MS.gene57237:intron | 45.0% |
| !! | CTGTGGATTGGAAAGACAAG+AGG | - | chr1.4:6058904-6058923 | MS.gene57237:intron | 45.0% |
| !! | TTAAAAAAAATATGAAAAAA+GGG | - | chr1.4:6060089-6060108 | MS.gene57237:CDS | 5.0% |
| !!! | TTTAACAATTTTTTTTTAAA+TGG | + | chr1.4:6063118-6063137 | None:intergenic | 5.0% |
| AAAACGAGCACCACAAGTGG+TGG | - | chr1.4:6061081-6061100 | MS.gene57237:CDS | 50.0% | |
| AAAGGTCCGGTAGCATGACA+CGG | + | chr1.4:6062841-6062860 | None:intergenic | 50.0% | |
| ACCATGAACAATCCTAGGCG+AGG | + | chr1.4:6063006-6063025 | None:intergenic | 50.0% | |
| ATCTAGAGGTAACACGGCGA+TGG | - | chr1.4:6061057-6061076 | MS.gene57237:CDS | 50.0% | |
| CAATCCGTTGTGAGTAGCAG+TGG | - | chr1.4:6060560-6060579 | MS.gene57237:CDS | 50.0% | |
| CGACCCTACTTAGTGGGATA+AGG | - | chr1.4:6059724-6059743 | MS.gene57237:intron | 50.0% | |
| GAACATGAAGGTCTTGGAGG+TGG | + | chr1.4:6060944-6060963 | None:intergenic | 50.0% | |
| GCAAAACTCATAGGAGGTGG+TGG | + | chr1.4:6061037-6061056 | None:intergenic | 50.0% | |
| GGCTACACCTGGGAATTGTT+TGG | + | chr1.4:6059705-6059724 | None:intergenic | 50.0% | |
| GGTAAAACGAGCACCACAAG+TGG | - | chr1.4:6061078-6061097 | MS.gene57237:CDS | 50.0% | |
| GTTGCATTGAGTAGGAGCTG+TGG | - | chr1.4:6058887-6058906 | MS.gene57237:intron | 50.0% | |
| TAGCCTGGGATCATCCTTGT+AGG | + | chr1.4:6061954-6061973 | None:intergenic | 50.0% | |
| TAGTCTGAGCAGTGATGCCT+CGG | + | chr1.4:6060384-6060403 | None:intergenic | 50.0% | |
| TCACAACCGTGTCATGCTAC+CGG | - | chr1.4:6062832-6062851 | MS.gene57237:intron | 50.0% | |
| TCATCAGTGAATCCCTCGTG+CGG | + | chr1.4:6062130-6062149 | None:intergenic | 50.0% | |
| TGGTACAGTTCCACCACTTG+TGG | + | chr1.4:6061094-6061113 | None:intergenic | 50.0% | |
| TGTAGCCGACCCTACTTAGT+GGG | - | chr1.4:6059718-6059737 | MS.gene57237:intron | 50.0% | |
| TTATACGCTTCTCCGCACGA+GGG | - | chr1.4:6062115-6062134 | MS.gene57237:intron | 50.0% | |
| TTTATACGCTTCTCCGCACG+AGG | - | chr1.4:6062114-6062133 | MS.gene57237:intron | 50.0% | |
| ! | AAACTCATAGGAGGTGGTGG+CGG | + | chr1.4:6061034-6061053 | None:intergenic | 50.0% |
| ! | AGGAGCTAGCCTATTTGAGG+TGG | - | chr1.4:6060465-6060484 | MS.gene57237:intron | 50.0% |
| ! | GAAGGTCTTGGAGGTGGATT+AGG | + | chr1.4:6060938-6060957 | None:intergenic | 50.0% |
| ! | GGAGCTAGCCTATTTGAGGT+GGG | - | chr1.4:6060466-6060485 | MS.gene57237:intron | 50.0% |
| ! | TGGAGGAGCTAGCCTATTTG+AGG | - | chr1.4:6060462-6060481 | MS.gene57237:intron | 50.0% |
| !! | CTGCTACTCACAACGGATTG+AGG | + | chr1.4:6060560-6060579 | None:intergenic | 50.0% |
| !! | CTTTGGAGAAGAGGGCGTTA+AGG | - | chr1.4:6060909-6060928 | MS.gene57237:CDS | 50.0% |
| AAGTAGGGTCGGCTACACCT+GGG | + | chr1.4:6059715-6059734 | None:intergenic | 55.0% | |
| CCTCCTACAAGGATGATCCC+AGG | - | chr1.4:6061948-6061967 | MS.gene57237:intron | 55.0% | |
| CCTGGGATCATCCTTGTAGG+AGG | + | chr1.4:6061951-6061970 | None:intergenic | 55.0% | |
| GCCTCGCCTAGGATTGTTCA+TGG | - | chr1.4:6063002-6063021 | MS.gene57237:CDS | 55.0% | |
| GTGTAGCCGACCCTACTTAG+TGG | - | chr1.4:6059717-6059736 | MS.gene57237:intron | 55.0% | |
| TAAGTAGGGTCGGCTACACC+TGG | + | chr1.4:6059716-6059735 | None:intergenic | 55.0% | |
| ! | ACAAGGGTTTTGCCTCGCCT+AGG | - | chr1.4:6062991-6063010 | MS.gene57237:intron | 55.0% |
| !! | ATAGGAGGTGGTGGCGGAGG+TGG | + | chr1.4:6061028-6061047 | None:intergenic | 65.0% |
| !! | CTCATAGGAGGTGGTGGCGG+AGG | + | chr1.4:6061031-6061050 | None:intergenic | 65.0% |
| GGCGGAGGTGGAGGTGGAGG+AGG | + | chr1.4:6061016-6061035 | None:intergenic | 75.0% | |
| !! | GGAGGTGGTGGCGGAGGTGG+AGG | + | chr1.4:6061025-6061044 | None:intergenic | 75.0% |
| !! | GGTGGCGGAGGTGGAGGTGG+AGG | + | chr1.4:6061019-6061038 | None:intergenic | 75.0% |
| !! | GGTGGTGGCGGAGGTGGAGG+TGG | + | chr1.4:6061022-6061041 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 6058644 | 6063429 | 6058644 | ID=MS.gene57237 |
| chr1.4 | mRNA | 6058644 | 6063429 | 6058644 | ID=MS.gene57237.t1;Parent=MS.gene57237 |
| chr1.4 | exon | 6062998 | 6063429 | 6062998 | ID=MS.gene57237.t1.exon1;Parent=MS.gene57237.t1 |
| chr1.4 | CDS | 6062998 | 6063429 | 6062998 | ID=cds.MS.gene57237.t1;Parent=MS.gene57237.t1 |
| chr1.4 | exon | 6060833 | 6061717 | 6060833 | ID=MS.gene57237.t1.exon2;Parent=MS.gene57237.t1 |
| chr1.4 | CDS | 6060833 | 6061717 | 6060833 | ID=cds.MS.gene57237.t1;Parent=MS.gene57237.t1 |
| chr1.4 | exon | 6060489 | 6060620 | 6060489 | ID=MS.gene57237.t1.exon3;Parent=MS.gene57237.t1 |
| chr1.4 | CDS | 6060489 | 6060620 | 6060489 | ID=cds.MS.gene57237.t1;Parent=MS.gene57237.t1 |
| chr1.4 | exon | 6060056 | 6060237 | 6060056 | ID=MS.gene57237.t1.exon4;Parent=MS.gene57237.t1 |
| chr1.4 | CDS | 6060056 | 6060237 | 6060056 | ID=cds.MS.gene57237.t1;Parent=MS.gene57237.t1 |
| chr1.4 | exon | 6059862 | 6059973 | 6059862 | ID=MS.gene57237.t1.exon5;Parent=MS.gene57237.t1 |
| chr1.4 | CDS | 6059862 | 6059973 | 6059862 | ID=cds.MS.gene57237.t1;Parent=MS.gene57237.t1 |
| chr1.4 | exon | 6059374 | 6059517 | 6059374 | ID=MS.gene57237.t1.exon6;Parent=MS.gene57237.t1 |
| chr1.4 | CDS | 6059374 | 6059517 | 6059374 | ID=cds.MS.gene57237.t1;Parent=MS.gene57237.t1 |
| chr1.4 | exon | 6058644 | 6058724 | 6058644 | ID=MS.gene57237.t1.exon7;Parent=MS.gene57237.t1 |
| chr1.4 | CDS | 6058644 | 6058724 | 6058644 | ID=cds.MS.gene57237.t1;Parent=MS.gene57237.t1 |
| Gene Sequence |
| Protein sequence |
