AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene57604

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57604.t1 MTR_3g104550 53.333 225 93 3 85 302 33 252 6.48e-77 239
MS.gene57604.t1 MTR_7g095680 49.187 246 105 3 66 291 7 252 3.19e-75 234
MS.gene57604.t1 MTR_1g102860 49.138 232 102 5 62 283 6 231 3.27e-71 223
MS.gene57604.t1 MTR_5g029680 51.707 205 83 3 85 275 21 223 2.01e-66 216
MS.gene57604.t1 MTR_1g071360 47.489 219 105 3 85 299 19 231 2.54e-64 206
MS.gene57604.t1 MTR_1g071360 47.489 219 105 3 85 299 16 228 4.93e-64 206
MS.gene57604.t1 MTR_4g077970 51.852 216 82 5 97 296 11 220 4.10e-63 207
MS.gene57604.t1 MTR_1g061170 49.500 200 96 1 85 279 36 235 6.93e-63 206
MS.gene57604.t1 MTR_8g087540 46.196 184 92 1 97 273 11 194 2.32e-52 177
MS.gene57604.t1 MTR_2g100680 44.041 193 105 1 96 285 29 221 1.88e-51 176
MS.gene57604.t1 MTR_6g043060 46.448 183 94 2 98 277 22 203 2.38e-49 167
MS.gene57604.t1 MTR_2g100670 42.929 198 108 3 92 285 27 223 1.46e-47 162
MS.gene57604.t1 MTR_2g100670 42.929 198 108 3 92 285 135 331 1.20e-46 162
MS.gene57604.t1 MTR_8g105780 47.644 191 86 3 98 274 22 212 1.77e-46 160
MS.gene57604.t1 MTR_8g083100 45.604 182 95 2 99 277 23 203 3.16e-46 162
MS.gene57604.t1 MTR_6g086805 45.263 190 99 2 98 283 11 199 2.98e-45 157
MS.gene57604.t1 MTR_2g017890 43.784 185 94 3 97 271 14 198 2.02e-42 150
MS.gene57604.t1 MTR_3g101870 60.000 110 43 1 92 201 18 126 1.21e-39 142
MS.gene57604.t1 MTR_5g010680 63.441 93 34 0 96 188 22 114 7.47e-39 140
MS.gene57604.t1 MTR_5g017470 62.766 94 35 0 95 188 6 99 1.86e-38 137
MS.gene57604.t1 MTR_5g089170 64.516 93 33 0 96 188 23 115 9.59e-38 134
MS.gene57604.t1 MTR_7g091370 54.054 111 47 1 90 196 10 120 3.46e-37 132
MS.gene57604.t1 MTR_1g100777 58.065 93 39 0 96 188 16 108 9.99e-35 128
MS.gene57604.t1 MTR_0020s0020 59.140 93 38 0 96 188 31 123 8.36e-34 126
MS.gene57604.t1 MTR_4g088900 56.701 97 38 1 96 188 31 127 2.06e-32 119
MS.gene57604.t1 MTR_1g061170 41.732 127 69 1 158 279 14 140 3.93e-24 100
MS.gene57604.t1 MTR_5g047190 46.316 95 44 2 106 193 1 95 8.29e-20 82.8
MS.gene57604.t1 MTR_4g045757 58.209 67 28 0 89 155 5 71 1.55e-19 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57604.t1 AT2G26150 53.778 225 92 4 85 300 31 252 1.17e-77 240
MS.gene57604.t1 AT2G26150 53.778 225 92 4 85 300 31 252 1.17e-77 240
MS.gene57604.t1 AT3G22830 47.391 230 107 2 71 286 34 263 1.48e-74 234
MS.gene57604.t1 AT5G54070 55.365 233 90 7 66 295 46 267 4.10e-73 228
MS.gene57604.t1 AT3G51910 48.792 207 96 3 88 293 19 216 3.35e-64 203
MS.gene57604.t1 AT5G16820 48.889 225 98 3 68 280 2 221 3.48e-64 209
MS.gene57604.t1 AT5G16820 48.889 225 98 3 68 280 2 221 3.48e-64 209
MS.gene57604.t1 AT1G32330 47.234 235 107 4 85 302 24 258 1.39e-63 208
MS.gene57604.t1 AT1G32330 47.234 235 107 4 85 302 24 258 1.67e-63 208
MS.gene57604.t1 AT4G17750 50.000 216 82 3 96 290 50 260 2.82e-63 207
MS.gene57604.t1 AT3G63350 44.545 220 118 2 71 287 1 219 4.90e-61 196
MS.gene57604.t1 AT3G02990 51.579 190 81 2 97 275 22 211 9.64e-59 195
MS.gene57604.t1 AT5G03720 47.291 203 101 3 84 280 41 243 9.44e-56 186
MS.gene57604.t1 AT5G03720 47.291 203 101 3 84 280 41 243 9.44e-56 186
MS.gene57604.t1 AT5G43840 44.500 200 100 2 84 279 5 197 1.17e-55 182
MS.gene57604.t1 AT1G67970 48.108 185 88 2 98 274 19 203 5.51e-51 172
MS.gene57604.t1 AT4G13980 43.716 183 100 1 99 278 24 206 5.03e-47 164
MS.gene57604.t1 AT3G24520 41.000 200 102 2 98 297 17 200 3.49e-44 153
MS.gene57604.t1 AT4G18880 44.865 185 94 2 90 266 7 191 1.55e-38 140
MS.gene57604.t1 AT1G46264 61.386 101 39 0 88 188 24 124 2.06e-38 139
MS.gene57604.t1 AT5G45710 41.808 177 96 1 97 266 12 188 6.33e-38 137
MS.gene57604.t1 AT5G45710 41.808 177 96 1 97 266 12 188 6.33e-38 137
MS.gene57604.t1 AT2G41690 61.290 93 36 0 96 188 38 130 5.60e-37 132
MS.gene57604.t1 AT4G36990 62.366 93 35 0 96 188 12 104 3.10e-36 131
MS.gene57604.t1 AT4G11660 61.290 93 36 0 96 188 57 149 3.23e-36 134
MS.gene57604.t1 AT5G62020 58.416 101 41 1 96 196 21 120 7.55e-36 131
MS.gene57604.t1 AT2G26150 37.634 186 84 5 124 300 35 197 1.25e-27 108
MS.gene57604.t1 AT2G26150 37.634 186 84 5 124 300 35 197 1.25e-27 108
MS.gene57604.t1 AT4G18870 42.045 88 51 0 98 185 146 233 8.39e-19 85.1
MS.gene57604.t1 AT4G18870 43.678 87 48 1 99 185 14 99 4.10e-18 83.2
MS.gene57604.t1 AT1G77570 38.636 88 51 2 99 183 27 114 9.13e-13 65.1
MS.gene57604.t1 AT4G19630 38.542 96 52 3 95 185 8 101 5.86e-12 62.4

Find 59 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCAAAAGGCCATTGTTTA+TGG 0.168710 8.4:-9044401 MS.gene57604:CDS
GTATTTAGGAAGAAGAATTT+TGG 0.245282 8.4:+9045584 None:intergenic
GAAACAATCGGGTCAGTTTC+CGG 0.255207 8.4:+9045657 None:intergenic
AGATCAGAACATGTTGAAAT+TGG 0.272987 8.4:-9044542 MS.gene57604:CDS
CTCCATAAACAATGGCCTTT+TGG 0.280439 8.4:+9044399 None:intergenic
TGTAACCCTTCCATTGGTTT+AGG 0.283169 8.4:+9045732 None:intergenic
TTATTATGCTTAAAGTATTT+AGG 0.297550 8.4:+9045570 None:intergenic
TCTGTCACATGCAGGGGTTT+AGG 0.362833 8.4:-9044729 MS.gene57604:intron
CGTTGGGAGTTTGCAAATGA+AGG 0.392464 8.4:-9044691 MS.gene57604:CDS
TGTAGCACCTTCTTCTTCTT+CGG 0.398248 8.4:+9045830 None:intergenic
TATTCAACTCACAAATGTTC+AGG 0.406470 8.4:-9044482 MS.gene57604:CDS
AAACTGACCCGATTGTTTCA+TGG 0.421449 8.4:-9045653 MS.gene57604:CDS
GGTGGTTACGACGGTGAAAT+CGG 0.435742 8.4:-9045969 MS.gene57604:CDS
GTTTGAAATGGTGGAGGATC+CGG 0.440036 8.4:-9045676 MS.gene57604:CDS
GTTAAAAGACCTAGATTGCT+TGG 0.444562 8.4:-9044322 MS.gene57604:CDS
GAAGCACTCCATGAAACAAT+CGG 0.466108 8.4:+9045645 None:intergenic
TCTCAAGAAGACGTTTGAAA+TGG 0.467110 8.4:-9045688 MS.gene57604:CDS
TCCTCACCAAAATGGCCAAA+AGG 0.470362 8.4:-9044414 MS.gene57604:CDS
GAAGGTTGATTCAGACCGTT+GGG 0.482934 8.4:-9044707 MS.gene57604:CDS
CAAATGAAGGATTTCAAGCA+GGG 0.484602 8.4:-9044678 MS.gene57604:CDS
GACTTACATAGGTGTTGAGC+TGG 0.485810 8.4:+9045529 None:intergenic
ATTTGTTGAAGAACATAAGA+AGG 0.488953 8.4:-9044648 MS.gene57604:CDS
ACCTCATGTAACCCTTCCAT+TGG 0.493568 8.4:+9045726 None:intergenic
GCACTGTCGTTGAATAACTC+TGG 0.499469 8.4:+9045912 None:intergenic
GCAAATGAAGGATTTCAAGC+AGG 0.502811 8.4:-9044679 MS.gene57604:CDS
ATTCAAAAGATTAAGCGAAA+AGG 0.508398 8.4:-9044370 MS.gene57604:CDS
AACAAAATGGCGGTGGCACA+CGG 0.510707 8.4:-9045990 None:intergenic
CAAGAAGACGTTTGAAATGG+TGG 0.512314 8.4:-9045685 MS.gene57604:CDS
CGCAATTCATATCAAAGAAG+AGG 0.515252 8.4:-9045799 MS.gene57604:CDS
GGAAGGTTGATTCAGACCGT+TGG 0.515312 8.4:-9044708 MS.gene57604:CDS
ACCTAGATTGCTTGGAACCA+AGG 0.516595 8.4:-9044314 MS.gene57604:CDS
TCAAACGTCTTCTTGAGAAA+CGG 0.525722 8.4:+9045693 None:intergenic
AATTGGAAATTCTGAAGCTA+AGG 0.526195 8.4:-9044525 MS.gene57604:CDS
TTCGGTTGAAACGTCGTCGT+AGG 0.530109 8.4:+9045872 None:intergenic
ACCTTGGTTCCAAGCAATCT+AGG 0.534331 8.4:+9044313 None:intergenic
ACTCAGGTTTCCTAAACCAA+TGG 0.540511 8.4:-9045742 MS.gene57604:CDS
AGGTTTCCTAAACCAATGGA+AGG 0.554746 8.4:-9045738 MS.gene57604:CDS
TCCACTTCAGATTCAACGCA+AGG 0.559576 8.4:+9044577 None:intergenic
CTTCATTTGCAAACTCCCAA+CGG 0.561522 8.4:+9044692 None:intergenic
ACAAATAAACAAAATGGCGG+TGG 0.567551 8.4:-9045997 None:intergenic
TCACATGCAGGGGTTTAGGA+AGG 0.572288 8.4:-9044725 MS.gene57604:intron
AAGCACTCCATGAAACAATC+GGG 0.577813 8.4:+9045646 None:intergenic
AAGTATAACAAACTGCATCA+AGG 0.578236 8.4:-9044619 MS.gene57604:CDS
CTAACGCTTCATCTTCACTC+AGG 0.586633 8.4:-9045758 MS.gene57604:CDS
GTCTTCTTGAGAAACGGTGG+TGG 0.589533 8.4:+9045699 None:intergenic
ATGGAAGGGTTACATGAGGT+TGG 0.601818 8.4:-9045723 MS.gene57604:CDS
GTACTAACCGAAGAAGAAGA+AGG 0.604108 8.4:-9045837 MS.gene57604:CDS
TCCTTGCGTTGAATCTGAAG+TGG 0.604555 8.4:-9044578 MS.gene57604:CDS
GAAGAGGTTCTTGAAGAAGA+CGG 0.609483 8.4:-9045783 MS.gene57604:CDS
ATTATCTGCTCCATAAACAA+TGG 0.622243 8.4:+9044391 None:intergenic
GGTTTCCTAAACCAATGGAA+GGG 0.633308 8.4:-9045737 MS.gene57604:CDS
GAAGACGTTTGAAATGGTGG+AGG 0.633963 8.4:-9045682 MS.gene57604:CDS
GTGGCACACGGTGGTTACGA+CGG 0.645161 8.4:-9045978 MS.gene57604:CDS
AACGTCTTCTTGAGAAACGG+TGG 0.656391 8.4:+9045696 None:intergenic
ACCAATGGAAGGGTTACATG+AGG 0.667282 8.4:-9045727 MS.gene57604:CDS
GGTTACGACGGTGAAATCGG+TGG 0.688203 8.4:-9045966 MS.gene57604:CDS
AGTTGATGCTAATATAGACA+TGG 0.689403 8.4:-9044344 MS.gene57604:CDS
TATAACAAACTGCATCAAGG+AGG 0.715319 8.4:-9044616 MS.gene57604:CDS
AAAATGGCGGTGGCACACGG+TGG 0.747694 8.4:-9045987 MS.gene57604:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATGATTCATATTTAT+AGG - chr8.4:9044946-9044965 MS.gene57604:intron 10.0%
!! TAAAATGATTCATATTTATA+GGG - chr8.4:9044947-9044966 MS.gene57604:intron 10.0%
!!! TTATTATGCTTAAAGTATTT+AGG + chr8.4:9044719-9044738 None:intergenic 15.0%
!!! TTTTTTCATGTTTTTTTACA+TGG + chr8.4:9045248-9045267 None:intergenic 15.0%
!! AAATCCAGAATAAATTCAAA+TGG + chr8.4:9045301-9045320 None:intergenic 20.0%
!!! AGAATTTTTTTGACTTACAT+AGG + chr8.4:9044771-9044790 None:intergenic 20.0%
!!! GCAAAAAACAAAATAGATTT+TGG + chr8.4:9045380-9045399 None:intergenic 20.0%
!!! TGTACAATTTAAATCAGTTT+TGG - chr8.4:9044836-9044855 MS.gene57604:intron 20.0%
! ACATTAAATTCGAACTTCAT+TGG - chr8.4:9045193-9045212 MS.gene57604:intron 25.0%
! ATTCAAAAGATTAAGCGAAA+AGG - chr8.4:9045916-9045935 MS.gene57604:CDS 25.0%
!! ATTTGTTGAAGAACATAAGA+AGG - chr8.4:9045638-9045657 MS.gene57604:CDS 25.0%
!! GTATTTAGGAAGAAGAATTT+TGG + chr8.4:9044705-9044724 None:intergenic 25.0%
!!! AATAACTCTGGTTTTATTGA+TGG + chr8.4:9044365-9044384 None:intergenic 25.0%
!!! ATAACTCTGGTTTTATTGAT+GGG + chr8.4:9044364-9044383 None:intergenic 25.0%
!!! TAGTACTGATTCTTTTCTTT+CGG + chr8.4:9044435-9044454 None:intergenic 25.0%
!!! TTACATGAACTCACTTTTAT+AGG - chr8.4:9045152-9045171 MS.gene57604:intron 25.0%
!!! TTTTTTGCAACCACAAAAAT+AGG - chr8.4:9045392-9045411 MS.gene57604:intron 25.0%
AAATCAACTCAATGCATGTT+TGG + chr8.4:9044891-9044910 None:intergenic 30.0%
AAGTATAACAAACTGCATCA+AGG - chr8.4:9045667-9045686 MS.gene57604:CDS 30.0%
AATGCATGTTTGGTATAATG+TGG + chr8.4:9044881-9044900 None:intergenic 30.0%
AGATCAGAACATGTTGAAAT+TGG - chr8.4:9045744-9045763 MS.gene57604:CDS 30.0%
ATTATCTGCTCCATAAACAA+TGG + chr8.4:9045898-9045917 None:intergenic 30.0%
TATTCAACTCACAAATGTTC+AGG - chr8.4:9045804-9045823 MS.gene57604:CDS 30.0%
TTCGCCATTTGAATTTATTC+TGG - chr8.4:9045294-9045313 MS.gene57604:intron 30.0%
! AGTTGATGCTAATATAGACA+TGG - chr8.4:9045942-9045961 MS.gene57604:CDS 30.0%
!! AATTGGAAATTCTGAAGCTA+AGG - chr8.4:9045761-9045780 MS.gene57604:CDS 30.0%
!! TTAAATCAGTTTTGGCATCA+CGG - chr8.4:9044844-9044863 MS.gene57604:intron 30.0%
!!! TCGTGATAGTTTTGTTGTTT+GGG - chr8.4:9044664-9044683 MS.gene57604:CDS 30.0%
CAAATGAAGGATTTCAAGCA+GGG - chr8.4:9045608-9045627 MS.gene57604:CDS 35.0%
CGCAATTCATATCAAAGAAG+AGG - chr8.4:9044487-9044506 MS.gene57604:CDS 35.0%
GTTAAAAGACCTAGATTGCT+TGG - chr8.4:9045964-9045983 MS.gene57604:CDS 35.0%
TATAACAAACTGCATCAAGG+AGG - chr8.4:9045670-9045689 MS.gene57604:CDS 35.0%
TATAGGGAGCTATGAATGTT+TGG - chr8.4:9044963-9044982 MS.gene57604:intron 35.0%
TCAAACGTCTTCTTGAGAAA+CGG + chr8.4:9044596-9044615 None:intergenic 35.0%
TCTCAAGAAGACGTTTGAAA+TGG - chr8.4:9044598-9044617 MS.gene57604:CDS 35.0%
TTATGAATCTGTCACATGCA+GGG - chr8.4:9045550-9045569 MS.gene57604:CDS 35.0%
TTTATGAATCTGTCACATGC+AGG - chr8.4:9045549-9045568 MS.gene57604:CDS 35.0%
TTTGCAACCACAAAAATAGG+TGG - chr8.4:9045395-9045414 MS.gene57604:intron 35.0%
! TTCAACATCTCCTCTAAAAG+AGG + chr8.4:9044991-9045010 None:intergenic 35.0%
!! ATGTTTGGTTCCTCTTTTAG+AGG - chr8.4:9044978-9044997 MS.gene57604:intron 35.0%
!!! CTCGTGATAGTTTTGTTGTT+TGG - chr8.4:9044663-9044682 MS.gene57604:CDS 35.0%
!!! CTGGTTTTATTGATGGGATT+AGG + chr8.4:9044358-9044377 None:intergenic 35.0%
!!! GCTATTTTTCCTCACCAAAA+TGG - chr8.4:9045864-9045883 MS.gene57604:CDS 35.0%
!!! TTAGTCTCCACCTATTTTTG+TGG + chr8.4:9045405-9045424 None:intergenic 35.0%
AAACTGACCCGATTGTTTCA+TGG - chr8.4:9044633-9044652 MS.gene57604:CDS 40.0%
AAGCACTCCATGAAACAATC+GGG + chr8.4:9044643-9044662 None:intergenic 40.0%
ACTCAGGTTTCCTAAACCAA+TGG - chr8.4:9044544-9044563 MS.gene57604:CDS 40.0%
AGGTTTCCTAAACCAATGGA+AGG - chr8.4:9044548-9044567 MS.gene57604:CDS 40.0%
CTTCATTTGCAAACTCCCAA+CGG + chr8.4:9045597-9045616 None:intergenic 40.0%
GAAGAGGTTCTTGAAGAAGA+CGG - chr8.4:9044503-9044522 MS.gene57604:CDS 40.0%
GCAAATGAAGGATTTCAAGC+AGG - chr8.4:9045607-9045626 MS.gene57604:CDS 40.0%
GGTGGAGACTAAAAATCAAG+AGG - chr8.4:9045413-9045432 MS.gene57604:intron 40.0%
GGTTTCCTAAACCAATGGAA+GGG - chr8.4:9044549-9044568 MS.gene57604:CDS 40.0%
GTACTAACCGAAGAAGAAGA+AGG - chr8.4:9044449-9044468 MS.gene57604:CDS 40.0%
TATGAATCTGTCACATGCAG+GGG - chr8.4:9045551-9045570 MS.gene57604:CDS 40.0%
TGTAGCACCTTCTTCTTCTT+CGG + chr8.4:9044459-9044478 None:intergenic 40.0%
! CAAGAAGACGTTTGAAATGG+TGG - chr8.4:9044601-9044620 MS.gene57604:CDS 40.0%
! CTCCATAAACAATGGCCTTT+TGG + chr8.4:9045890-9045909 None:intergenic 40.0%
! GAAGCACTCCATGAAACAAT+CGG + chr8.4:9044644-9044663 None:intergenic 40.0%
!! TGTAACCCTTCCATTGGTTT+AGG + chr8.4:9044557-9044576 None:intergenic 40.0%
AACGTCTTCTTGAGAAACGG+TGG + chr8.4:9044593-9044612 None:intergenic 45.0%
ACCAATGGAAGGGTTACATG+AGG - chr8.4:9044559-9044578 MS.gene57604:CDS 45.0%
ACCTAGATTGCTTGGAACCA+AGG - chr8.4:9045972-9045991 MS.gene57604:CDS 45.0%
ACCTCATGTAACCCTTCCAT+TGG + chr8.4:9044563-9044582 None:intergenic 45.0%
ACCTTGGTTCCAAGCAATCT+AGG + chr8.4:9045976-9045995 None:intergenic 45.0%
ATGGAAGGGTTACATGAGGT+TGG - chr8.4:9044563-9044582 MS.gene57604:CDS 45.0%
CGTTGGGAGTTTGCAAATGA+AGG - chr8.4:9045595-9045614 MS.gene57604:CDS 45.0%
CTAACGCTTCATCTTCACTC+AGG - chr8.4:9044528-9044547 MS.gene57604:CDS 45.0%
GAAACAATCGGGTCAGTTTC+CGG + chr8.4:9044632-9044651 None:intergenic 45.0%
GCACTGTCGTTGAATAACTC+TGG + chr8.4:9044377-9044396 None:intergenic 45.0%
GGCCAAAAGGCCATTGTTTA+TGG - chr8.4:9045885-9045904 MS.gene57604:CDS 45.0%
TCCACTTCAGATTCAACGCA+AGG + chr8.4:9045712-9045731 None:intergenic 45.0%
TCCTCACCAAAATGGCCAAA+AGG - chr8.4:9045872-9045891 MS.gene57604:CDS 45.0%
TCCTTGCGTTGAATCTGAAG+TGG - chr8.4:9045708-9045727 MS.gene57604:CDS 45.0%
! CAATGGCCTTTTGGCCATTT+TGG + chr8.4:9045881-9045900 None:intergenic 45.0%
! GAAGACGTTTGAAATGGTGG+AGG - chr8.4:9044604-9044623 MS.gene57604:CDS 45.0%
! GAAGGTTGATTCAGACCGTT+GGG - chr8.4:9045579-9045598 MS.gene57604:CDS 45.0%
! GTTTGAAATGGTGGAGGATC+CGG - chr8.4:9044610-9044629 MS.gene57604:CDS 45.0%
!! GACTTACATAGGTGTTGAGC+TGG + chr8.4:9044760-9044779 None:intergenic 45.0%
GGTGGTTACGACGGTGAAAT+CGG - chr8.4:9044317-9044336 MS.gene57604:CDS 50.0%
GTCTTCTTGAGAAACGGTGG+TGG + chr8.4:9044590-9044609 None:intergenic 50.0%
TCACATGCAGGGGTTTAGGA+AGG - chr8.4:9045561-9045580 MS.gene57604:CDS 50.0%
TCTGTCACATGCAGGGGTTT+AGG - chr8.4:9045557-9045576 MS.gene57604:CDS 50.0%
TTCGGTTGAAACGTCGTCGT+AGG + chr8.4:9044417-9044436 None:intergenic 50.0%
! GGAAGGTTGATTCAGACCGT+TGG - chr8.4:9045578-9045597 MS.gene57604:CDS 50.0%
!! GCCTTTTGGCCATTTTGGTG+AGG + chr8.4:9045876-9045895 None:intergenic 50.0%
GGTTACGACGGTGAAATCGG+TGG - chr8.4:9044320-9044339 MS.gene57604:CDS 55.0%
GTGGCACACGGTGGTTACGA+CGG - chr8.4:9044308-9044327 MS.gene57604:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 9044302 9046006 9044302 ID=MS.gene57604
chr8.4 mRNA 9044302 9046006 9044302 ID=MS.gene57604.t1;Parent=MS.gene57604
chr8.4 exon 9045536 9046006 9045536 ID=MS.gene57604.t1.exon1;Parent=MS.gene57604.t1
chr8.4 CDS 9045536 9046006 9045536 ID=cds.MS.gene57604.t1;Parent=MS.gene57604.t1
chr8.4 exon 9044302 9044737 9044302 ID=MS.gene57604.t1.exon2;Parent=MS.gene57604.t1
chr8.4 CDS 9044302 9044737 9044302 ID=cds.MS.gene57604.t1;Parent=MS.gene57604.t1
Gene Sequence

>MS.gene57604

ATGGCGGTGGCACACGGTGGTTACGACGGTGAAATCGGTGGCTACAATTCTCGCCTAATCCCATCAATAAAACCAGAGTTATTCAACGACAGTGCAAATTCAAGCTCTTACACCTACGACGACGTTTCAACCGAAAGAAAAGAATCAGTACTAACCGAAGAAGAAGAAGGTGCTACAGCTTCTCACGCAATTCATATCAAAGAAGAGGTTCTTGAAGAAGACGGTGCTAACGCTTCATCTTCACTCAGGTTTCCTAAACCAATGGAAGGGTTACATGAGGTTGGTCCACCACCGTTTCTCAAGAAGACGTTTGAAATGGTGGAGGATCCGGAAACTGACCCGATTGTTTCATGGAGTGCTTCTCGTGATAGTTTTGTTGTTTGGGATTCTCATGAATTCTCCAAAATTCTTCTTCCTAAATACTTTAAGCATAATAATTTTTCTAGCTTCATTCGCCAGCTCAACACCTATGTAAGTCAAAAAAATTCTCTATATCTTCTTCATATGTTATCATTGCATACATATTTATAATCTTGTACAATTTAAATCAGTTTTGGCATCACGGTTTTGTTCAATCCACATTATACCAAACATGCATTGAGTTGATTTTCTAAAATTAATTTTGTTAAAAAGTTGATTCATACATAAAATGATTCATATTTATAGGGAGCTATGAATGTTTGGTTCCTCTTTTAGAGGAGATGTTGAATTGATTAAATAGATGTTGAATTGATTTTTGACATGTTTGTTGTTCTTGATTAGAATGATTTTGCTTTTGTAACTGATTTTGATTTTAAGTTGAAGCTAAAAATTTGATTTTTTAATTCTAAAATTTATTGTTCAACTTATTTTACATGAACTCACTTTTATAGGAATGCATTCAATCATTTTACATTAAATTCGAACTTCATTGGAATCATTTCAATCAAAATCAATTTTTGTGCCATGTAAAAAAACATGAAAAAACTGAAGACTTCAAGATATCTTTGCGATTCGCCATTTGAATTTATTCTGGATTTTTACACTCAAATTCATATCTAATTTTTACACTCACTTTTAACTACGAACAATTGAACCAAAATCTATTTTGTTTTTTGCAACCACAAAAATAGGTGGAGACTAAAAATCAAGAGGTAAAAGCTCTTAGATTTTGCTTGAGAACATTCAAACAACTCTAAATCAATTCTATATTTTTAAAATCACTTTGTATCTCTTAAAATTTAATACAAACATATTCTTTGTTGAATTTTATGAATCTGTCACATGCAGGGGTTTAGGAAGGTTGATTCAGACCGTTGGGAGTTTGCAAATGAAGGATTTCAAGCAGGGAAAAAGCATTTGTTGAAGAACATAAGAAGGAGAAGCAAGTATAACAAACTGCATCAAGGAGGATTCAATTTGATGAATCCTTGCGTTGAATCTGAAGTGGAGAAACTGAAAAAAGATCAGAACATGTTGAAATTGGAAATTCTGAAGCTAAGGCAACAACAAGAGAATTCAAATATTCAACTCACAAATGTTCAGGAGCGAGTTCAGCGAGCAGAATCGAAGCAATATCAGATGCTATTTTTCCTCACCAAAATGGCCAAAAGGCCATTGTTTATGGAGCAGATAATTCAAAAGATTAAGCGAAAAGGAGAAGTTGATGCTAATATAGACATGGTTAAAAGACCTAGATTGCTTGGAACCAAGGTTCTAAAAAACG
Protein sequence

>MS.gene57604.t1

MAVAHGGYDGEIGGYNSRLIPSIKPELFNDSANSSSYTYDDVSTERKESVLTEEEEGATASHAIHIKEEVLEEDGANASSSLRFPKPMEGLHEVGPPPFLKKTFEMVEDPETDPIVSWSASRDSFVVWDSHEFSKILLPKYFKHNNFSSFIRQLNTYGFRKVDSDRWEFANEGFQAGKKHLLKNIRRRSKYNKLHQGGFNLMNPCVESEVEKLKKDQNMLKLEILKLRQQQENSNIQLTNVQERVQRAESKQYQMLFFLTKMAKRPLFMEQIIQKIKRKGEVDANIDMVKRPRLLGTKVLKN