Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051856.t1 | XP_024637947.1 | 96.9 | 422 | 11 | 1 | 1 | 420 | 1 | 422 | 1.90E-227 | 798.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051856.t1 | Q6VBB2 | 48.6 | 243 | 115 | 3 | 69 | 304 | 22 | 261 | 4.8e-57 | 223.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051856.t1 | A0A396IIY0 | 96.9 | 422 | 11 | 1 | 1 | 420 | 1 | 422 | 1.4e-227 | 798.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene051856.t1 | TF | HSF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049368 | MS.gene051856 | 0.82634 | 2.86E-54 | -1.69E-46 |
| MS.gene049983 | MS.gene051856 | 0.809206 | 2.12E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene051856 | 0.806782 | 6.96E-50 | -1.69E-46 |
| MS.gene050384 | MS.gene051856 | 0.817202 | 3.73E-52 | -1.69E-46 |
| MS.gene050386 | MS.gene051856 | 0.81869 | 1.72E-52 | -1.69E-46 |
| MS.gene050414 | MS.gene051856 | 0.826497 | 2.63E-54 | -1.69E-46 |
| MS.gene050646 | MS.gene051856 | 0.810115 | 1.35E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene051856 | 0.829108 | 6.19E-55 | -1.69E-46 |
| MS.gene050826 | MS.gene051856 | 0.800374 | 1.48E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene051902 | 0.80453 | 2.07E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene053079 | 0.801259 | 9.80E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene053931 | 0.82754 | 1.48E-54 | -1.69E-46 |
| MS.gene051856 | MS.gene056045 | 0.831261 | 1.85E-55 | -1.69E-46 |
| MS.gene051856 | MS.gene056181 | 0.84475 | 6.23E-59 | -1.69E-46 |
| MS.gene051856 | MS.gene058008 | 0.801307 | 9.58E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene060244 | 0.804958 | 1.68E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene061878 | 0.801259 | 9.80E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene061958 | 0.81734 | 3.47E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene062117 | 0.811599 | 6.46E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene062253 | 0.809049 | 2.29E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene063492 | 0.810781 | 9.72E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene063772 | 0.834075 | 3.70E-56 | -1.69E-46 |
| MS.gene051856 | MS.gene064336 | 0.802702 | 4.95E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene06489 | 0.810699 | 1.01E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene065593 | 0.811297 | 7.51E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene065666 | 0.818136 | 2.29E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene066718 | 0.810645 | 1.04E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene066906 | -0.80868 | 2.75E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene067308 | 0.802493 | 5.46E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene067857 | 0.801025 | 1.09E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene068166 | 0.808665 | 2.77E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene06946 | 0.806833 | 6.79E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene069519 | 0.810134 | 1.34E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene069828 | 0.820636 | 6.18E-53 | -1.69E-46 |
| MS.gene051856 | MS.gene06998 | 0.801353 | 9.37E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene07067 | 0.804989 | 1.66E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene07073 | 0.82208 | 2.87E-53 | -1.69E-46 |
| MS.gene051856 | MS.gene071074 | 0.829515 | 4.93E-55 | -1.69E-46 |
| MS.gene051856 | MS.gene071076 | 0.824698 | 7.01E-54 | -1.69E-46 |
| MS.gene051856 | MS.gene072153 | 0.815417 | 9.35E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene072632 | 0.802692 | 4.97E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene072685 | 0.810998 | 8.72E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene072808 | 0.802067 | 6.69E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene072873 | 0.841881 | 3.63E-58 | -1.69E-46 |
| MS.gene051856 | MS.gene073387 | 0.805077 | 1.59E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene074329 | 0.827015 | 1.98E-54 | -1.69E-46 |
| MS.gene051856 | MS.gene074462 | 0.802443 | 5.60E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene07878 | 0.848701 | 5.18E-60 | -1.69E-46 |
| MS.gene051856 | MS.gene08724 | 0.810763 | 9.80E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene08793 | 0.818481 | 1.92E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene08889 | 0.835326 | 1.79E-56 | -1.69E-46 |
| MS.gene051856 | MS.gene08961 | 0.802983 | 4.33E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene09297 | 0.801749 | 7.77E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene20064 | 0.809725 | 1.64E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene20886 | 0.803519 | 3.35E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene20985 | 0.802551 | 5.32E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene21056 | 0.818628 | 1.78E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene21103 | 0.80073 | 1.26E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene21105 | 0.800319 | 1.52E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene21107 | 0.800831 | 1.20E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene21651 | 0.805675 | 1.19E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene22321 | 0.801024 | 1.09E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene22433 | 0.811723 | 6.07E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene22499 | 0.807436 | 5.06E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene22695 | 0.836819 | 7.48E-57 | -1.69E-46 |
| MS.gene051856 | MS.gene23060 | 0.809263 | 2.06E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene23103 | 0.800947 | 1.13E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene23484 | 0.801581 | 8.42E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene23513 | 0.802 | 6.90E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene24444 | 0.809835 | 1.55E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene24907 | 0.813389 | 2.62E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene25079 | 0.800154 | 1.65E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene25695 | 0.835545 | 1.58E-56 | -1.69E-46 |
| MS.gene051856 | MS.gene25928 | 0.806954 | 6.40E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene27287 | 0.821091 | 4.86E-53 | -1.69E-46 |
| MS.gene051856 | MS.gene27997 | 0.813446 | 2.55E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene28623 | 0.819688 | 1.02E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene28820 | 0.846626 | 1.93E-59 | -1.69E-46 |
| MS.gene051856 | MS.gene29209 | 0.80585 | 1.09E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene30352 | 0.826868 | 2.14E-54 | -1.69E-46 |
| MS.gene051856 | MS.gene30753 | 0.823959 | 1.05E-53 | -1.69E-46 |
| MS.gene051856 | MS.gene31045 | 0.829255 | 5.70E-55 | -1.69E-46 |
| MS.gene051856 | MS.gene31802 | 0.80351 | 3.37E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene31862 | 0.835123 | 2.02E-56 | -1.69E-46 |
| MS.gene051856 | MS.gene32654 | 0.846619 | 1.94E-59 | -1.69E-46 |
| MS.gene051856 | MS.gene32657 | 0.800368 | 1.49E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene32688 | 0.801641 | 8.18E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene32884 | 0.81032 | 1.22E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene33363 | 0.807346 | 5.29E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene33364 | 0.800065 | 1.72E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene33644 | 0.812185 | 4.82E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene34326 | 0.819261 | 1.27E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene35034 | 0.805425 | 1.34E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene35436 | 0.818689 | 1.72E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene35530 | 0.801452 | 8.94E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene35789 | 0.809932 | 1.48E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene35808 | 0.812751 | 3.62E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene36571 | 0.814615 | 1.41E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene39510 | 0.802549 | 5.32E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene40462 | 0.807577 | 4.72E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene40748 | 0.808784 | 2.61E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene41775 | 0.810099 | 1.36E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene41903 | 0.809667 | 1.69E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene42302 | 0.805211 | 1.49E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene42653 | 0.801471 | 8.87E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene42783 | 0.800998 | 1.11E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene43152 | 0.811702 | 6.13E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene43838 | 0.832852 | 7.46E-56 | -1.69E-46 |
| MS.gene051856 | MS.gene44406 | -0.800988 | 1.11E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene44764 | 0.823126 | 1.64E-53 | -1.69E-46 |
| MS.gene051856 | MS.gene45537 | 0.809608 | 1.74E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene45652 | 0.822615 | 2.15E-53 | -1.69E-46 |
| MS.gene051856 | MS.gene45761 | 0.835415 | 1.70E-56 | -1.69E-46 |
| MS.gene051856 | MS.gene46305 | 0.841766 | 3.89E-58 | -1.69E-46 |
| MS.gene051856 | MS.gene47311 | 0.850242 | 1.93E-60 | -1.69E-46 |
| MS.gene051856 | MS.gene47674 | 0.823663 | 1.23E-53 | -1.69E-46 |
| MS.gene051856 | MS.gene47967 | 0.814739 | 1.32E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene47995 | 0.802738 | 4.87E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene49320 | 0.805502 | 1.29E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene49816 | 0.821928 | 3.11E-53 | -1.69E-46 |
| MS.gene051856 | MS.gene50200 | 0.803587 | 3.25E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene51028 | 0.809879 | 1.52E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene51029 | 0.819752 | 9.85E-53 | -1.69E-46 |
| MS.gene051856 | MS.gene51641 | 0.811582 | 6.51E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene51704 | 0.806195 | 9.25E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene51715 | 0.806345 | 8.61E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene51814 | 0.809096 | 2.24E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene51985 | 0.815705 | 8.06E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene52002 | 0.802009 | 6.87E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene54158 | 0.815891 | 7.33E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene54299 | 0.804058 | 2.59E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene54573 | 0.815739 | 7.92E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene55094 | 0.838341 | 3.05E-57 | -1.69E-46 |
| MS.gene051856 | MS.gene55530 | 0.813277 | 2.78E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene56163 | 0.830051 | 3.65E-55 | -1.69E-46 |
| MS.gene051856 | MS.gene56339 | 0.811019 | 8.63E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene56742 | 0.825902 | 3.64E-54 | -1.69E-46 |
| MS.gene051856 | MS.gene57572 | 0.981825 | 1.53E-153 | -1.69E-46 |
| MS.gene051856 | MS.gene57603 | 0.862648 | 4.37E-64 | -1.69E-46 |
| MS.gene051856 | MS.gene57604 | 0.917893 | 3.05E-86 | -1.69E-46 |
| MS.gene051856 | MS.gene57605 | 0.868259 | 7.46E-66 | -1.69E-46 |
| MS.gene051856 | MS.gene57783 | 0.838265 | 3.19E-57 | -1.69E-46 |
| MS.gene051856 | MS.gene57894 | 0.802986 | 4.32E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene57980 | 0.838022 | 3.68E-57 | -1.69E-46 |
| MS.gene051856 | MS.gene58134 | 0.809806 | 1.58E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene59215 | 0.801886 | 7.29E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene59366 | 0.81516 | 1.07E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene60144 | 0.807185 | 5.72E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene60300 | 0.820876 | 5.44E-53 | -1.69E-46 |
| MS.gene051856 | MS.gene60304 | 0.826377 | 2.80E-54 | -1.69E-46 |
| MS.gene051856 | MS.gene60399 | 0.841551 | 4.44E-58 | -1.69E-46 |
| MS.gene051856 | MS.gene61644 | 0.814523 | 1.48E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene62798 | 0.800633 | 1.32E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene63930 | 0.842398 | 2.65E-58 | -1.69E-46 |
| MS.gene051856 | MS.gene65518 | 0.82872 | 7.68E-55 | -1.69E-46 |
| MS.gene051856 | MS.gene66858 | 0.805982 | 1.03E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene67010 | 0.801595 | 8.36E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene67412 | 0.810839 | 9.44E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene69097 | 0.803938 | 2.75E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene70469 | 0.816268 | 6.03E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene71616 | 0.842249 | 2.90E-58 | -1.69E-46 |
| MS.gene051856 | MS.gene71994 | 0.819005 | 1.46E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene72994 | 0.802676 | 5.01E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene73462 | 0.818941 | 1.51E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene74930 | 0.825828 | 3.79E-54 | -1.69E-46 |
| MS.gene051856 | MS.gene74932 | 0.809874 | 1.53E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene75072 | 0.830512 | 2.82E-55 | -1.69E-46 |
| MS.gene051856 | MS.gene75113 | 0.805834 | 1.10E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene75148 | 0.820988 | 5.13E-53 | -1.69E-46 |
| MS.gene051856 | MS.gene75866 | 0.825005 | 5.93E-54 | -1.69E-46 |
| MS.gene051856 | MS.gene77361 | 0.808621 | 2.83E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene77448 | 0.81907 | 1.41E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene80233 | 0.800394 | 1.47E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene80237 | 0.844865 | 5.80E-59 | -1.69E-46 |
| MS.gene051856 | MS.gene80715 | 0.808832 | 2.55E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene82806 | 0.812344 | 4.45E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene83056 | 0.802518 | 5.40E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene83624 | 0.801941 | 7.10E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene86919 | 0.840052 | 1.10E-57 | -1.69E-46 |
| MS.gene051856 | MS.gene87292 | 0.823159 | 1.61E-53 | -1.69E-46 |
| MS.gene051856 | MS.gene87622 | 0.811896 | 5.57E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene88649 | 0.800394 | 1.47E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene89605 | 0.803847 | 2.87E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene90263 | 0.800992 | 1.11E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene90861 | 0.811813 | 5.80E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene91203 | 0.801488 | 8.79E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene91307 | 0.844848 | 5.86E-59 | -1.69E-46 |
| MS.gene051856 | MS.gene91416 | 0.803111 | 4.07E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene92390 | 0.833541 | 5.03E-56 | -1.69E-46 |
| MS.gene051856 | MS.gene93728 | 0.841278 | 5.24E-58 | -1.69E-46 |
| MS.gene051856 | MS.gene94952 | 0.824382 | 8.32E-54 | -1.69E-46 |
| MS.gene051856 | MS.gene95096 | 0.810727 | 9.98E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene95204 | 0.801655 | 8.13E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene95235 | 0.81022 | 1.28E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene95339 | 0.827155 | 1.83E-54 | -1.69E-46 |
| MS.gene051856 | MS.gene95562 | 0.808289 | 3.33E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene96102 | 0.803264 | 3.79E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene96103 | 0.806684 | 7.30E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene96287 | 0.801723 | 7.87E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene96353 | 0.828383 | 9.27E-55 | -1.69E-46 |
| MS.gene051856 | MS.gene96690 | 0.820288 | 7.42E-53 | -1.69E-46 |
| MS.gene051856 | MS.gene97281 | 0.815952 | 7.10E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene99915 | 0.8098 | 1.58E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051856.t1 | MTR_3g104550 | 41.226 | 359 | 167 | 9 | 86 | 418 | 33 | 373 | 5.51e-77 | 244 |
| MS.gene051856.t1 | MTR_7g095680 | 47.273 | 275 | 124 | 4 | 67 | 320 | 7 | 281 | 2.47e-75 | 239 |
| MS.gene051856.t1 | MTR_1g102860 | 47.619 | 252 | 115 | 6 | 63 | 304 | 6 | 250 | 2.79e-70 | 225 |
| MS.gene051856.t1 | MTR_5g029680 | 51.707 | 205 | 83 | 3 | 86 | 276 | 21 | 223 | 4.50e-65 | 216 |
| MS.gene051856.t1 | MTR_1g071360 | 47.727 | 220 | 106 | 3 | 86 | 303 | 19 | 231 | 2.42e-63 | 207 |
| MS.gene051856.t1 | MTR_1g071360 | 47.727 | 220 | 106 | 3 | 86 | 303 | 16 | 228 | 5.18e-63 | 207 |
| MS.gene051856.t1 | MTR_4g077970 | 51.852 | 216 | 82 | 5 | 98 | 297 | 11 | 220 | 8.93e-62 | 207 |
| MS.gene051856.t1 | MTR_1g061170 | 49.500 | 200 | 96 | 1 | 86 | 280 | 36 | 235 | 1.22e-61 | 206 |
| MS.gene051856.t1 | MTR_8g087540 | 44.444 | 198 | 100 | 2 | 98 | 285 | 11 | 208 | 1.88e-51 | 178 |
| MS.gene051856.t1 | MTR_2g100680 | 44.041 | 193 | 105 | 1 | 97 | 286 | 29 | 221 | 1.98e-50 | 176 |
| MS.gene051856.t1 | MTR_6g043060 | 41.004 | 239 | 118 | 5 | 99 | 334 | 22 | 240 | 1.42e-48 | 168 |
| MS.gene051856.t1 | MTR_2g100670 | 41.038 | 212 | 113 | 4 | 93 | 300 | 27 | 230 | 1.22e-46 | 163 |
| MS.gene051856.t1 | MTR_2g100670 | 41.038 | 212 | 113 | 4 | 93 | 300 | 135 | 338 | 8.22e-46 | 163 |
| MS.gene051856.t1 | MTR_8g083100 | 45.604 | 182 | 95 | 2 | 100 | 278 | 23 | 203 | 1.71e-45 | 164 |
| MS.gene051856.t1 | MTR_8g105780 | 47.644 | 191 | 86 | 3 | 99 | 275 | 22 | 212 | 3.26e-45 | 160 |
| MS.gene051856.t1 | MTR_6g086805 | 45.263 | 190 | 99 | 2 | 99 | 284 | 11 | 199 | 2.64e-44 | 157 |
| MS.gene051856.t1 | MTR_2g017890 | 43.784 | 185 | 94 | 3 | 98 | 272 | 14 | 198 | 1.84e-41 | 151 |
| MS.gene051856.t1 | MTR_3g101870 | 60.000 | 110 | 43 | 1 | 93 | 202 | 18 | 126 | 9.06e-39 | 143 |
| MS.gene051856.t1 | MTR_5g010680 | 63.441 | 93 | 34 | 0 | 97 | 189 | 22 | 114 | 7.77e-38 | 140 |
| MS.gene051856.t1 | MTR_5g017470 | 62.766 | 94 | 35 | 0 | 96 | 189 | 6 | 99 | 1.12e-37 | 138 |
| MS.gene051856.t1 | MTR_5g089170 | 64.516 | 93 | 33 | 0 | 97 | 189 | 23 | 115 | 7.55e-37 | 135 |
| MS.gene051856.t1 | MTR_7g091370 | 53.571 | 112 | 48 | 1 | 90 | 197 | 9 | 120 | 5.19e-36 | 132 |
| MS.gene051856.t1 | MTR_1g100777 | 58.065 | 93 | 39 | 0 | 97 | 189 | 16 | 108 | 8.20e-34 | 128 |
| MS.gene051856.t1 | MTR_0020s0020 | 59.140 | 93 | 38 | 0 | 97 | 189 | 31 | 123 | 5.25e-33 | 127 |
| MS.gene051856.t1 | MTR_4g088900 | 56.701 | 97 | 38 | 1 | 97 | 189 | 31 | 127 | 1.34e-31 | 120 |
| MS.gene051856.t1 | MTR_1g061170 | 41.732 | 127 | 69 | 1 | 159 | 280 | 14 | 140 | 1.03e-23 | 102 |
| MS.gene051856.t1 | MTR_4g045757 | 58.209 | 67 | 28 | 0 | 90 | 156 | 5 | 71 | 5.57e-20 | 84.0 |
| MS.gene051856.t1 | MTR_5g047190 | 46.316 | 95 | 44 | 2 | 107 | 194 | 1 | 95 | 2.52e-19 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051856.t1 | AT2G26150 | 40.950 | 337 | 144 | 8 | 86 | 408 | 31 | 326 | 4.84e-76 | 240 |
| MS.gene051856.t1 | AT2G26150 | 40.950 | 337 | 144 | 8 | 86 | 408 | 31 | 326 | 4.84e-76 | 240 |
| MS.gene051856.t1 | AT5G54070 | 52.713 | 258 | 108 | 7 | 67 | 321 | 46 | 292 | 9.91e-74 | 234 |
| MS.gene051856.t1 | AT3G22830 | 46.586 | 249 | 117 | 4 | 72 | 305 | 34 | 281 | 1.10e-73 | 236 |
| MS.gene051856.t1 | AT5G16820 | 47.391 | 230 | 94 | 3 | 69 | 281 | 2 | 221 | 7.49e-63 | 210 |
| MS.gene051856.t1 | AT5G16820 | 47.391 | 230 | 94 | 3 | 69 | 281 | 2 | 221 | 7.49e-63 | 210 |
| MS.gene051856.t1 | AT3G51910 | 48.792 | 207 | 96 | 3 | 89 | 294 | 19 | 216 | 9.96e-63 | 203 |
| MS.gene051856.t1 | AT4G17750 | 50.000 | 216 | 82 | 3 | 97 | 291 | 50 | 260 | 4.59e-62 | 208 |
| MS.gene051856.t1 | AT1G32330 | 47.186 | 231 | 106 | 3 | 86 | 300 | 24 | 254 | 7.46e-62 | 207 |
| MS.gene051856.t1 | AT1G32330 | 47.186 | 231 | 106 | 3 | 86 | 300 | 24 | 254 | 9.06e-62 | 207 |
| MS.gene051856.t1 | AT3G63350 | 39.850 | 266 | 150 | 3 | 72 | 328 | 1 | 265 | 9.75e-60 | 196 |
| MS.gene051856.t1 | AT3G02990 | 51.579 | 190 | 81 | 2 | 98 | 276 | 22 | 211 | 1.48e-57 | 196 |
| MS.gene051856.t1 | AT5G43840 | 45.503 | 189 | 96 | 1 | 85 | 273 | 5 | 186 | 1.57e-54 | 182 |
| MS.gene051856.t1 | AT5G03720 | 47.291 | 203 | 101 | 3 | 85 | 281 | 41 | 243 | 1.72e-54 | 186 |
| MS.gene051856.t1 | AT5G03720 | 47.291 | 203 | 101 | 3 | 85 | 281 | 41 | 243 | 1.72e-54 | 186 |
| MS.gene051856.t1 | AT1G67970 | 48.108 | 185 | 88 | 2 | 99 | 275 | 19 | 203 | 1.60e-49 | 172 |
| MS.gene051856.t1 | AT4G13980 | 43.716 | 183 | 100 | 1 | 100 | 279 | 24 | 206 | 2.03e-46 | 166 |
| MS.gene051856.t1 | AT3G24520 | 41.000 | 200 | 102 | 2 | 99 | 298 | 17 | 200 | 5.07e-43 | 154 |
| MS.gene051856.t1 | AT4G18880 | 44.865 | 185 | 94 | 2 | 91 | 267 | 7 | 191 | 7.40e-38 | 142 |
| MS.gene051856.t1 | AT1G46264 | 61.386 | 101 | 39 | 0 | 89 | 189 | 24 | 124 | 2.05e-37 | 139 |
| MS.gene051856.t1 | AT5G45710 | 41.808 | 177 | 96 | 1 | 98 | 267 | 12 | 188 | 2.09e-37 | 139 |
| MS.gene051856.t1 | AT5G45710 | 41.808 | 177 | 96 | 1 | 98 | 267 | 12 | 188 | 2.09e-37 | 139 |
| MS.gene051856.t1 | AT2G41690 | 61.290 | 93 | 36 | 0 | 97 | 189 | 38 | 130 | 6.94e-36 | 132 |
| MS.gene051856.t1 | AT4G11660 | 61.290 | 93 | 36 | 0 | 97 | 189 | 57 | 149 | 2.30e-35 | 134 |
| MS.gene051856.t1 | AT4G36990 | 62.366 | 93 | 35 | 0 | 97 | 189 | 12 | 104 | 3.38e-35 | 132 |
| MS.gene051856.t1 | AT5G62020 | 58.416 | 101 | 41 | 1 | 97 | 197 | 21 | 120 | 4.22e-35 | 132 |
| MS.gene051856.t1 | AT2G26150 | 29.195 | 298 | 136 | 9 | 125 | 408 | 35 | 271 | 3.61e-27 | 110 |
| MS.gene051856.t1 | AT2G26150 | 29.195 | 298 | 136 | 9 | 125 | 408 | 35 | 271 | 3.61e-27 | 110 |
| MS.gene051856.t1 | AT4G18870 | 42.045 | 88 | 51 | 0 | 99 | 186 | 146 | 233 | 2.05e-18 | 85.5 |
| MS.gene051856.t1 | AT4G18870 | 43.678 | 87 | 48 | 1 | 100 | 186 | 14 | 99 | 2.10e-17 | 82.8 |
| MS.gene051856.t1 | AT1G77570 | 37.778 | 90 | 53 | 2 | 100 | 186 | 27 | 116 | 2.14e-12 | 65.1 |
| MS.gene051856.t1 | AT4G19630 | 38.542 | 96 | 52 | 3 | 96 | 186 | 8 | 101 | 1.57e-11 | 62.0 |
Find 86 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCAAAAGGCCATTGTTTA+TGG | 0.168710 | 8.2:+6522395 | MS.gene051856:CDS |
| GTATTTAGGAAGAAGAATTT+TGG | 0.245282 | 8.2:-6521215 | None:intergenic |
| GAAACAATCGGGTCAGTTTC+CGG | 0.255207 | 8.2:-6521142 | None:intergenic |
| AGATCAGAACATGTTGAAAT+TGG | 0.272987 | 8.2:+6522254 | MS.gene051856:CDS |
| CTCCATAAACAATGGCCTTT+TGG | 0.280439 | 8.2:-6522397 | None:intergenic |
| TGTAACCCTTCCATTGGTTT+AGG | 0.283169 | 8.2:-6521067 | None:intergenic |
| TTATTATGCTTAAAGTATTT+AGG | 0.297550 | 8.2:-6521229 | None:intergenic |
| TAATATCTATCTTGAATTAG+AGG | 0.304710 | 8.2:+6522782 | MS.gene051856:CDS |
| TGTTATGTCAGAGAAGCTTT+TGG | 0.350236 | 8.2:+6522716 | MS.gene051856:CDS |
| TCTGTCACATGCAGGGGTTT+AGG | 0.362833 | 8.2:+6522067 | MS.gene051856:intron |
| GATAAGTAAGCCAACAGATT+GGG | 0.381656 | 8.2:+6522809 | MS.gene051856:CDS |
| CCTTGTGTTCCAAGCAATCT+AGG | 0.385680 | 8.2:-6522483 | None:intergenic |
| TTCTGTTGTTGATGAAGAAA+TGG | 0.389880 | 8.2:+6522746 | MS.gene051856:CDS |
| CGTTGGGAGTTTGCAAATGA+AGG | 0.392464 | 8.2:+6522105 | MS.gene051856:CDS |
| TATTCAACTCACAAATGTTC+AGG | 0.406470 | 8.2:+6522314 | MS.gene051856:CDS |
| TAATGTTGATTATAGGAGTC+AGG | 0.409936 | 8.2:+6522509 | MS.gene051856:CDS |
| AAACTGACCCGATTGTTTCA+TGG | 0.421449 | 8.2:+6521146 | MS.gene051856:CDS |
| TGGATCTGCTAGTGGATTGG+TGG | 0.433958 | 8.2:+6522833 | MS.gene051856:CDS |
| GGTGGTTACGACGGTGAAAT+CGG | 0.435742 | 8.2:+6520827 | MS.gene051856:CDS |
| TAGCTCTTTACATGACTTGA+GGG | 0.437021 | 8.2:+6522644 | MS.gene051856:CDS |
| GTTTGAAATGGTGGAGGATC+CGG | 0.440036 | 8.2:+6521123 | MS.gene051856:CDS |
| GTTAAAAGACCTAGATTGCT+TGG | 0.444562 | 8.2:+6522474 | MS.gene051856:CDS |
| AAGGTACTAATGTTGATTAT+AGG | 0.444857 | 8.2:+6522502 | MS.gene051856:CDS |
| GCACTGTCGTTGAATAGCTC+TGG | 0.449080 | 8.2:-6520884 | None:intergenic |
| AAATATGAACACTGGTAGAA+TGG | 0.455673 | 8.2:+6522584 | MS.gene051856:CDS |
| GAAGCACTCCATGAAACAAT+CGG | 0.466108 | 8.2:-6521154 | None:intergenic |
| TCTCAAGAAGACGTTTGAAA+TGG | 0.467110 | 8.2:+6521111 | MS.gene051856:CDS |
| TGATAAGTAAGCCAACAGAT+TGG | 0.468059 | 8.2:+6522808 | MS.gene051856:CDS |
| TCCTCACCAAAATGGCCAAA+AGG | 0.470362 | 8.2:+6522382 | MS.gene051856:CDS |
| TCTTCCATGGGAGTAGAAAC+AGG | 0.475802 | 8.2:-6522612 | None:intergenic |
| GAAGGTTGATTCAGACCGTT+GGG | 0.482934 | 8.2:+6522089 | MS.gene051856:CDS |
| CAAATGAAGGATTTCAAGCA+GGG | 0.484602 | 8.2:+6522118 | MS.gene051856:CDS |
| GACTTACATAGGTGTTGAGC+TGG | 0.485810 | 8.2:-6521270 | None:intergenic |
| ATTTGTTGAAGAACATAAGA+AGG | 0.488953 | 8.2:+6522148 | MS.gene051856:CDS |
| ACCTCATGTAACCCTTCCAT+TGG | 0.493568 | 8.2:-6521073 | None:intergenic |
| GGGTGGATCTGCTAGTGGAT+TGG | 0.502731 | 8.2:+6522830 | MS.gene051856:CDS |
| GCAAATGAAGGATTTCAAGC+AGG | 0.502811 | 8.2:+6522117 | MS.gene051856:CDS |
| ATTCAAAAGATTAAGCGAAA+AGG | 0.508398 | 8.2:+6522426 | MS.gene051856:CDS |
| TTACATGACTTGAGGGCTTG+TGG | 0.510182 | 8.2:+6522651 | MS.gene051856:CDS |
| AACAAAATGGCGGTGGCACA+CGG | 0.510707 | 8.2:+6520806 | None:intergenic |
| ACTTTGCAATCTGAATTGAA+TGG | 0.510922 | 8.2:+6522549 | MS.gene051856:CDS |
| CAAGAAGACGTTTGAAATGG+TGG | 0.512314 | 8.2:+6521114 | MS.gene051856:CDS |
| GTTTCTACTCCCATGGAAGA+TGG | 0.512936 | 8.2:+6522615 | MS.gene051856:CDS |
| CGCAATTCATATCAAAGAAG+AGG | 0.515252 | 8.2:+6521000 | MS.gene051856:CDS |
| GGAAGGTTGATTCAGACCGT+TGG | 0.515312 | 8.2:+6522088 | MS.gene051856:CDS |
| GTAGCTCTTTACATGACTTG+AGG | 0.518635 | 8.2:+6522643 | MS.gene051856:CDS |
| TCAAACGTCTTCTTGAGAAA+CGG | 0.525722 | 8.2:-6521106 | None:intergenic |
| AATTGGAAATTCTGAAGCTA+AGG | 0.526195 | 8.2:+6522271 | MS.gene051856:CDS |
| TTCGGTTGAAACGTCGTCGT+AGG | 0.530109 | 8.2:-6520924 | None:intergenic |
| GCTACACAGTCCATCTTCCA+TGG | 0.535967 | 8.2:-6522625 | None:intergenic |
| GGATCTGCTAGTGGATTGGT+GGG | 0.540365 | 8.2:+6522834 | MS.gene051856:CDS |
| ACTCAGGTTTCCTAAACCAA+TGG | 0.540511 | 8.2:+6521057 | MS.gene051856:CDS |
| ACCACCTGTTTCTACTCCCA+TGG | 0.552610 | 8.2:+6522608 | MS.gene051856:CDS |
| AGGTTTCCTAAACCAATGGA+AGG | 0.554746 | 8.2:+6521061 | MS.gene051856:CDS |
| TCCACTTCAGATTCAACGCA+AGG | 0.559576 | 8.2:-6522219 | None:intergenic |
| CTTCATTTGCAAACTCCCAA+CGG | 0.561522 | 8.2:-6522104 | None:intergenic |
| CCTAGATTGCTTGGAACACA+AGG | 0.567220 | 8.2:+6522483 | MS.gene051856:CDS |
| ACAAATAAACAAAATGGCGG+TGG | 0.567551 | 8.2:+6520799 | None:intergenic |
| TCACATGCAGGGGTTTAGGA+AGG | 0.572288 | 8.2:+6522071 | MS.gene051856:intron |
| ATAAGTAAGCCAACAGATTG+GGG | 0.574399 | 8.2:+6522810 | MS.gene051856:CDS |
| AAGCACTCCATGAAACAATC+GGG | 0.577813 | 8.2:-6521153 | None:intergenic |
| AAGTATAACAAACTGCATCA+AGG | 0.578236 | 8.2:+6522177 | MS.gene051856:CDS |
| AATGTTGATTATAGGAGTCA+GGG | 0.582952 | 8.2:+6522510 | MS.gene051856:CDS |
| TTTCCTGAAAATATGAACAC+TGG | 0.585214 | 8.2:+6522576 | MS.gene051856:CDS |
| CTAACGCTTCATCTTCACTC+AGG | 0.586633 | 8.2:+6521041 | MS.gene051856:CDS |
| GCAGATCCACCCCAATCTGT+TGG | 0.588399 | 8.2:-6522819 | None:intergenic |
| GTCTTCTTGAGAAACGGTGG+TGG | 0.589533 | 8.2:-6521100 | None:intergenic |
| ATGGAAGGGTTACATGAGGT+TGG | 0.601818 | 8.2:+6521076 | MS.gene051856:CDS |
| TCCTTGCGTTGAATCTGAAG+TGG | 0.604555 | 8.2:+6522218 | MS.gene051856:CDS |
| GAAGAGGTTCTTGAAGAAGA+CGG | 0.609483 | 8.2:+6521016 | MS.gene051856:CDS |
| CTACACAGTCCATCTTCCAT+GGG | 0.610941 | 8.2:-6522624 | None:intergenic |
| CTAACCGAAGAAGAAGAAGA+AGG | 0.615759 | 8.2:+6520962 | MS.gene051856:CDS |
| ATTATCTGCTCCATAAACAA+TGG | 0.622243 | 8.2:-6522405 | None:intergenic |
| GATTGGGGTGGATCTGCTAG+TGG | 0.632406 | 8.2:+6522825 | MS.gene051856:CDS |
| GGTTTCCTAAACCAATGGAA+GGG | 0.633308 | 8.2:+6521062 | MS.gene051856:CDS |
| GAAGACGTTTGAAATGGTGG+AGG | 0.633963 | 8.2:+6521117 | MS.gene051856:CDS |
| CATGACTTGAGGGCTTGTGG+TGG | 0.643012 | 8.2:+6522654 | MS.gene051856:CDS |
| GTGGCACACGGTGGTTACGA+CGG | 0.645161 | 8.2:+6520818 | MS.gene051856:CDS |
| AACGTCTTCTTGAGAAACGG+TGG | 0.656391 | 8.2:-6521103 | None:intergenic |
| AGTAAGCCAACAGATTGGGG+TGG | 0.660771 | 8.2:+6522813 | MS.gene051856:CDS |
| ACCAATGGAAGGGTTACATG+AGG | 0.667282 | 8.2:+6521072 | MS.gene051856:CDS |
| GGTTACGACGGTGAAATCGG+TGG | 0.688203 | 8.2:+6520830 | MS.gene051856:CDS |
| AGTTGATGCTAATATAGACA+TGG | 0.689403 | 8.2:+6522452 | MS.gene051856:CDS |
| TATAACAAACTGCATCAAGG+AGG | 0.715319 | 8.2:+6522180 | MS.gene051856:CDS |
| AAAATGGCGGTGGCACACGG+TGG | 0.747694 | 8.2:+6520809 | None:intergenic |
| TCCATGGGAGTAGAAACAGG+TGG | 0.762840 | 8.2:-6522609 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATGATTCATATTTAT+AGG | + | chr8.2:6521456-6521475 | MS.gene051856:intron | 10.0% |
| !! | TAAAATGATTCATATTTATA+GGG | + | chr8.2:6521457-6521476 | MS.gene051856:intron | 10.0% |
| !!! | TTATTATGCTTAAAGTATTT+AGG | - | chr8.2:6521232-6521251 | None:intergenic | 15.0% |
| !!! | TTTTTTCATGTTTTTTTACA+TGG | - | chr8.2:6521758-6521777 | None:intergenic | 15.0% |
| !! | AAATCCAGAATAAATTCAAA+TGG | - | chr8.2:6521811-6521830 | None:intergenic | 20.0% |
| !! | TAATATCTATCTTGAATTAG+AGG | + | chr8.2:6522782-6522801 | MS.gene051856:CDS | 20.0% |
| !!! | AGAATTTTTTTGACTTACAT+AGG | - | chr8.2:6521284-6521303 | None:intergenic | 20.0% |
| !!! | GCAAAAAACAAAATAGATTT+TGG | - | chr8.2:6521890-6521909 | None:intergenic | 20.0% |
| !!! | TAGTATTGATTCTTTTCTTT+CGG | - | chr8.2:6520945-6520964 | None:intergenic | 20.0% |
| !!! | TGTACAATTTAAATCAGTTT+TGG | + | chr8.2:6521346-6521365 | MS.gene051856:intron | 20.0% |
| ! | ACATTAAATTCGAACTTCAT+TGG | + | chr8.2:6521703-6521722 | MS.gene051856:intron | 25.0% |
| ! | ATTCAAAAGATTAAGCGAAA+AGG | + | chr8.2:6522426-6522445 | MS.gene051856:CDS | 25.0% |
| !! | AAGGTACTAATGTTGATTAT+AGG | + | chr8.2:6522502-6522521 | MS.gene051856:CDS | 25.0% |
| !! | ATTTGTTGAAGAACATAAGA+AGG | + | chr8.2:6522148-6522167 | MS.gene051856:CDS | 25.0% |
| !! | GTATTTAGGAAGAAGAATTT+TGG | - | chr8.2:6521218-6521237 | None:intergenic | 25.0% |
| !!! | TTACATGAACTCACTTTTAT+AGG | + | chr8.2:6521662-6521681 | MS.gene051856:intron | 25.0% |
| !!! | TTTTTTGCAACCACAAAAAT+AGG | + | chr8.2:6521902-6521921 | MS.gene051856:intron | 25.0% |
| AAATATGAACACTGGTAGAA+TGG | + | chr8.2:6522584-6522603 | MS.gene051856:CDS | 30.0% | |
| AAATCAACTCAATGCATGTT+TGG | - | chr8.2:6521401-6521420 | None:intergenic | 30.0% | |
| AAGTATAACAAACTGCATCA+AGG | + | chr8.2:6522177-6522196 | MS.gene051856:CDS | 30.0% | |
| ACTTTGCAATCTGAATTGAA+TGG | + | chr8.2:6522549-6522568 | MS.gene051856:CDS | 30.0% | |
| AGATCAGAACATGTTGAAAT+TGG | + | chr8.2:6522254-6522273 | MS.gene051856:CDS | 30.0% | |
| ATTATCTGCTCCATAAACAA+TGG | - | chr8.2:6522408-6522427 | None:intergenic | 30.0% | |
| TATTCAACTCACAAATGTTC+AGG | + | chr8.2:6522314-6522333 | MS.gene051856:CDS | 30.0% | |
| TTCGCCATTTGAATTTATTC+TGG | + | chr8.2:6521804-6521823 | MS.gene051856:intron | 30.0% | |
| TTTCCTGAAAATATGAACAC+TGG | + | chr8.2:6522576-6522595 | MS.gene051856:CDS | 30.0% | |
| ! | AATGTTGATTATAGGAGTCA+GGG | + | chr8.2:6522510-6522529 | MS.gene051856:CDS | 30.0% |
| ! | AGTTGATGCTAATATAGACA+TGG | + | chr8.2:6522452-6522471 | MS.gene051856:CDS | 30.0% |
| ! | TAATGTTGATTATAGGAGTC+AGG | + | chr8.2:6522509-6522528 | MS.gene051856:CDS | 30.0% |
| ! | TTCTGTTGTTGATGAAGAAA+TGG | + | chr8.2:6522746-6522765 | MS.gene051856:CDS | 30.0% |
| !! | AATTGGAAATTCTGAAGCTA+AGG | + | chr8.2:6522271-6522290 | MS.gene051856:CDS | 30.0% |
| !! | TTAAATCAGTTTTGGCATCA+CGG | + | chr8.2:6521354-6521373 | MS.gene051856:intron | 30.0% |
| !!! | AATAGCTCTGGTTTTATTGA+TGG | - | chr8.2:6520875-6520894 | None:intergenic | 30.0% |
| !!! | ATAGCTCTGGTTTTATTGAT+GGG | - | chr8.2:6520874-6520893 | None:intergenic | 30.0% |
| !!! | TCGTGATAGTTTTGTTGTTT+GGG | + | chr8.2:6521177-6521196 | MS.gene051856:CDS | 30.0% |
| AATGCATGTTTGGTATCATG+TGG | - | chr8.2:6521391-6521410 | None:intergenic | 35.0% | |
| ATAAGTAAGCCAACAGATTG+GGG | + | chr8.2:6522810-6522829 | MS.gene051856:CDS | 35.0% | |
| CAAATGAAGGATTTCAAGCA+GGG | + | chr8.2:6522118-6522137 | MS.gene051856:CDS | 35.0% | |
| CGCAATTCATATCAAAGAAG+AGG | + | chr8.2:6521000-6521019 | MS.gene051856:CDS | 35.0% | |
| GATAAGTAAGCCAACAGATT+GGG | + | chr8.2:6522809-6522828 | MS.gene051856:CDS | 35.0% | |
| GTTAAAAGACCTAGATTGCT+TGG | + | chr8.2:6522474-6522493 | MS.gene051856:CDS | 35.0% | |
| TAGCTCTTTACATGACTTGA+GGG | + | chr8.2:6522644-6522663 | MS.gene051856:CDS | 35.0% | |
| TATAACAAACTGCATCAAGG+AGG | + | chr8.2:6522180-6522199 | MS.gene051856:CDS | 35.0% | |
| TATAGGGAGCTATGAATGTT+TGG | + | chr8.2:6521473-6521492 | MS.gene051856:intron | 35.0% | |
| TCAAACGTCTTCTTGAGAAA+CGG | - | chr8.2:6521109-6521128 | None:intergenic | 35.0% | |
| TCTCAAGAAGACGTTTGAAA+TGG | + | chr8.2:6521111-6521130 | MS.gene051856:CDS | 35.0% | |
| TGATAAGTAAGCCAACAGAT+TGG | + | chr8.2:6522808-6522827 | MS.gene051856:CDS | 35.0% | |
| TTATGAATCTGTCACATGCA+GGG | + | chr8.2:6522060-6522079 | MS.gene051856:intron | 35.0% | |
| TTTATGAATCTGTCACATGC+AGG | + | chr8.2:6522059-6522078 | MS.gene051856:intron | 35.0% | |
| TTTGCAACCACAAAAATAGG+TGG | + | chr8.2:6521905-6521924 | MS.gene051856:intron | 35.0% | |
| ! | CTACCAGTGTTCATATTTTC+AGG | - | chr8.2:6522582-6522601 | None:intergenic | 35.0% |
| ! | GTTATGTCAGAGAAGCTTTT+GGG | + | chr8.2:6522717-6522736 | MS.gene051856:CDS | 35.0% |
| ! | TGTTATGTCAGAGAAGCTTT+TGG | + | chr8.2:6522716-6522735 | MS.gene051856:CDS | 35.0% |
| ! | TTATGTCAGAGAAGCTTTTG+GGG | + | chr8.2:6522718-6522737 | MS.gene051856:CDS | 35.0% |
| ! | TTCAACATCTCCTCTAAAAG+AGG | - | chr8.2:6521501-6521520 | None:intergenic | 35.0% |
| !! | ATGTTTGGTTCCTCTTTTAG+AGG | + | chr8.2:6521488-6521507 | MS.gene051856:intron | 35.0% |
| !!! | CTCGTGATAGTTTTGTTGTT+TGG | + | chr8.2:6521176-6521195 | MS.gene051856:CDS | 35.0% |
| !!! | CTGGTTTTATTGATGGGATT+AGG | - | chr8.2:6520868-6520887 | None:intergenic | 35.0% |
| !!! | GCTATTTTTCCTCACCAAAA+TGG | + | chr8.2:6522374-6522393 | MS.gene051856:CDS | 35.0% |
| !!! | TTAGTCTCCACCTATTTTTG+TGG | - | chr8.2:6521915-6521934 | None:intergenic | 35.0% |
| AAACTGACCCGATTGTTTCA+TGG | + | chr8.2:6521146-6521165 | MS.gene051856:CDS | 40.0% | |
| AAGCACTCCATGAAACAATC+GGG | - | chr8.2:6521156-6521175 | None:intergenic | 40.0% | |
| ACTCAGGTTTCCTAAACCAA+TGG | + | chr8.2:6521057-6521076 | MS.gene051856:CDS | 40.0% | |
| AGCACCTTCTTCTTCTTCTT+CGG | - | chr8.2:6520969-6520988 | None:intergenic | 40.0% | |
| AGGTTTCCTAAACCAATGGA+AGG | + | chr8.2:6521061-6521080 | MS.gene051856:CDS | 40.0% | |
| CTAACCGAAGAAGAAGAAGA+AGG | + | chr8.2:6520962-6520981 | MS.gene051856:CDS | 40.0% | |
| CTTCATTTGCAAACTCCCAA+CGG | - | chr8.2:6522107-6522126 | None:intergenic | 40.0% | |
| GAAGAGGTTCTTGAAGAAGA+CGG | + | chr8.2:6521016-6521035 | MS.gene051856:CDS | 40.0% | |
| GCAAATGAAGGATTTCAAGC+AGG | + | chr8.2:6522117-6522136 | MS.gene051856:CDS | 40.0% | |
| GGTGGAGACTAAAAATCAAG+AGG | + | chr8.2:6521923-6521942 | MS.gene051856:intron | 40.0% | |
| GGTTTCCTAAACCAATGGAA+GGG | + | chr8.2:6521062-6521081 | MS.gene051856:CDS | 40.0% | |
| GTAGCTCTTTACATGACTTG+AGG | + | chr8.2:6522643-6522662 | MS.gene051856:CDS | 40.0% | |
| TATGAATCTGTCACATGCAG+GGG | + | chr8.2:6522061-6522080 | MS.gene051856:intron | 40.0% | |
| ! | CAAGAAGACGTTTGAAATGG+TGG | + | chr8.2:6521114-6521133 | MS.gene051856:CDS | 40.0% |
| ! | CTCCATAAACAATGGCCTTT+TGG | - | chr8.2:6522400-6522419 | None:intergenic | 40.0% |
| ! | GAAGCACTCCATGAAACAAT+CGG | - | chr8.2:6521157-6521176 | None:intergenic | 40.0% |
| ! | TATGTCAGAGAAGCTTTTGG+GGG | + | chr8.2:6522719-6522738 | MS.gene051856:CDS | 40.0% |
| !! | TGTAACCCTTCCATTGGTTT+AGG | - | chr8.2:6521070-6521089 | None:intergenic | 40.0% |
| AACGTCTTCTTGAGAAACGG+TGG | - | chr8.2:6521106-6521125 | None:intergenic | 45.0% | |
| ACCAATGGAAGGGTTACATG+AGG | + | chr8.2:6521072-6521091 | MS.gene051856:CDS | 45.0% | |
| ACCTCATGTAACCCTTCCAT+TGG | - | chr8.2:6521076-6521095 | None:intergenic | 45.0% | |
| ATGGAAGGGTTACATGAGGT+TGG | + | chr8.2:6521076-6521095 | MS.gene051856:CDS | 45.0% | |
| CCTAGATTGCTTGGAACACA+AGG | + | chr8.2:6522483-6522502 | MS.gene051856:CDS | 45.0% | |
| CCTTGTGTTCCAAGCAATCT+AGG | - | chr8.2:6522486-6522505 | None:intergenic | 45.0% | |
| CGTTGGGAGTTTGCAAATGA+AGG | + | chr8.2:6522105-6522124 | MS.gene051856:CDS | 45.0% | |
| CTAACGCTTCATCTTCACTC+AGG | + | chr8.2:6521041-6521060 | MS.gene051856:CDS | 45.0% | |
| CTACACAGTCCATCTTCCAT+GGG | - | chr8.2:6522627-6522646 | None:intergenic | 45.0% | |
| GAAACAATCGGGTCAGTTTC+CGG | - | chr8.2:6521145-6521164 | None:intergenic | 45.0% | |
| GGCCAAAAGGCCATTGTTTA+TGG | + | chr8.2:6522395-6522414 | MS.gene051856:CDS | 45.0% | |
| GTTTCTACTCCCATGGAAGA+TGG | + | chr8.2:6522615-6522634 | MS.gene051856:CDS | 45.0% | |
| TCCACTTCAGATTCAACGCA+AGG | - | chr8.2:6522222-6522241 | None:intergenic | 45.0% | |
| TCCTCACCAAAATGGCCAAA+AGG | + | chr8.2:6522382-6522401 | MS.gene051856:CDS | 45.0% | |
| TCCTTGCGTTGAATCTGAAG+TGG | + | chr8.2:6522218-6522237 | MS.gene051856:CDS | 45.0% | |
| TCTTCCATGGGAGTAGAAAC+AGG | - | chr8.2:6522615-6522634 | None:intergenic | 45.0% | |
| TTACATGACTTGAGGGCTTG+TGG | + | chr8.2:6522651-6522670 | MS.gene051856:CDS | 45.0% | |
| ! | CAATGGCCTTTTGGCCATTT+TGG | - | chr8.2:6522391-6522410 | None:intergenic | 45.0% |
| ! | GAAGACGTTTGAAATGGTGG+AGG | + | chr8.2:6521117-6521136 | MS.gene051856:CDS | 45.0% |
| ! | GAAGGTTGATTCAGACCGTT+GGG | + | chr8.2:6522089-6522108 | MS.gene051856:CDS | 45.0% |
| ! | GTTTGAAATGGTGGAGGATC+CGG | + | chr8.2:6521123-6521142 | MS.gene051856:CDS | 45.0% |
| !! | GACTTACATAGGTGTTGAGC+TGG | - | chr8.2:6521273-6521292 | None:intergenic | 45.0% |
| AGTAAGCCAACAGATTGGGG+TGG | + | chr8.2:6522813-6522832 | MS.gene051856:CDS | 50.0% | |
| GCACTGTCGTTGAATAGCTC+TGG | - | chr8.2:6520887-6520906 | None:intergenic | 50.0% | |
| GCTACACAGTCCATCTTCCA+TGG | - | chr8.2:6522628-6522647 | None:intergenic | 50.0% | |
| GGTGGTTACGACGGTGAAAT+CGG | + | chr8.2:6520827-6520846 | MS.gene051856:CDS | 50.0% | |
| GTCTTCTTGAGAAACGGTGG+TGG | - | chr8.2:6521103-6521122 | None:intergenic | 50.0% | |
| TCACATGCAGGGGTTTAGGA+AGG | + | chr8.2:6522071-6522090 | MS.gene051856:intron | 50.0% | |
| TCCATGGGAGTAGAAACAGG+TGG | - | chr8.2:6522612-6522631 | None:intergenic | 50.0% | |
| TCTGTCACATGCAGGGGTTT+AGG | + | chr8.2:6522067-6522086 | MS.gene051856:intron | 50.0% | |
| TTCGGTTGAAACGTCGTCGT+AGG | - | chr8.2:6520927-6520946 | None:intergenic | 50.0% | |
| ! | GGAAGGTTGATTCAGACCGT+TGG | + | chr8.2:6522088-6522107 | MS.gene051856:CDS | 50.0% |
| !! | ACCACCTGTTTCTACTCCCA+TGG | + | chr8.2:6522608-6522627 | MS.gene051856:CDS | 50.0% |
| !! | GCCTTTTGGCCATTTTGGTG+AGG | - | chr8.2:6522386-6522405 | None:intergenic | 50.0% |
| !! | GGATCTGCTAGTGGATTGGT+GGG | + | chr8.2:6522834-6522853 | MS.gene051856:CDS | 50.0% |
| !! | TGGATCTGCTAGTGGATTGG+TGG | + | chr8.2:6522833-6522852 | MS.gene051856:CDS | 50.0% |
| CATGACTTGAGGGCTTGTGG+TGG | + | chr8.2:6522654-6522673 | MS.gene051856:CDS | 55.0% | |
| GATTGGGGTGGATCTGCTAG+TGG | + | chr8.2:6522825-6522844 | MS.gene051856:CDS | 55.0% | |
| GCAGATCCACCCCAATCTGT+TGG | - | chr8.2:6522822-6522841 | None:intergenic | 55.0% | |
| GGTTACGACGGTGAAATCGG+TGG | + | chr8.2:6520830-6520849 | MS.gene051856:CDS | 55.0% | |
| ! | GGGTGGATCTGCTAGTGGAT+TGG | + | chr8.2:6522830-6522849 | MS.gene051856:CDS | 55.0% |
| GTGGCACACGGTGGTTACGA+CGG | + | chr8.2:6520818-6520837 | MS.gene051856:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 6520812 | 6522869 | 6520812 | ID=MS.gene051856 |
| chr8.2 | mRNA | 6520812 | 6522869 | 6520812 | ID=MS.gene051856.t1;Parent=MS.gene051856 |
| chr8.2 | exon | 6520812 | 6521285 | 6520812 | ID=MS.gene051856.t1.exon1;Parent=MS.gene051856.t1 |
| chr8.2 | CDS | 6520812 | 6521285 | 6520812 | ID=cds.MS.gene051856.t1;Parent=MS.gene051856.t1 |
| chr8.2 | exon | 6522081 | 6522869 | 6522081 | ID=MS.gene051856.t1.exon2;Parent=MS.gene051856.t1 |
| chr8.2 | CDS | 6522081 | 6522869 | 6522081 | ID=cds.MS.gene051856.t1;Parent=MS.gene051856.t1 |
| Gene Sequence |
| Protein sequence |
