Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57629.t1 | XP_013458499.1 | 96.6 | 147 | 4 | 1 | 1 | 146 | 1 | 147 | 2.60E-70 | 274.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57629.t1 | A0A072V313 | 96.6 | 147 | 4 | 1 | 1 | 146 | 1 | 147 | 1.9e-70 | 274.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051875 | MS.gene57629 | 0.921967 | 1.81E-88 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57629.t1 | MTR_4g126360 | 96.599 | 147 | 4 | 1 | 1 | 146 | 1 | 147 | 6.02e-99 | 281 |
| MS.gene57629.t1 | MTR_8g016210 | 39.855 | 138 | 60 | 4 | 16 | 146 | 19 | 140 | 1.55e-20 | 82.0 |
| MS.gene57629.t1 | MTR_8g016210 | 40.441 | 136 | 58 | 4 | 16 | 144 | 62 | 181 | 2.98e-20 | 82.4 |
| MS.gene57629.t1 | MTR_8g016220 | 37.121 | 132 | 64 | 4 | 16 | 144 | 18 | 133 | 3.27e-18 | 75.9 |
| MS.gene57629.t1 | MTR_8g016220 | 66.667 | 51 | 17 | 0 | 94 | 144 | 123 | 173 | 8.01e-18 | 75.9 |
| MS.gene57629.t1 | MTR_8g010670 | 59.615 | 52 | 21 | 0 | 93 | 144 | 435 | 486 | 1.08e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57629.t1 | AT1G55160 | 43.846 | 130 | 63 | 2 | 17 | 146 | 18 | 137 | 5.08e-28 | 101 |
| MS.gene57629.t1 | AT1G55160 | 43.846 | 130 | 63 | 2 | 17 | 146 | 69 | 188 | 1.62e-27 | 101 |
| MS.gene57629.t1 | AT2G19530 | 36.022 | 186 | 76 | 5 | 1 | 146 | 1 | 183 | 5.09e-25 | 95.1 |
| MS.gene57629.t1 | AT1G55160 | 37.931 | 145 | 75 | 3 | 17 | 146 | 69 | 213 | 1.88e-22 | 89.0 |
Find 36 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGAAATCTTCGTAATTT+AGG | 0.160954 | 8.3:+4184244 | None:intergenic |
| CCTTCACCTGCACCTCCAAC+TGG | 0.257972 | 8.3:-4185951 | MS.gene57629:CDS |
| CCTAAATTACGAAGATTTCT+TGG | 0.289145 | 8.3:-4184244 | MS.gene57629:CDS |
| CGTTGTTGTTCGTCAGGAAT+TGG | 0.294229 | 8.3:+4184189 | None:intergenic |
| ACTGAACTTGTGCTGGGTTC+AGG | 0.350977 | 8.3:+4184270 | None:intergenic |
| CTGACCTCCAAGTGCAAGAT+TGG | 0.362880 | 8.3:+4185881 | None:intergenic |
| CTTTCCAATCTTGCACTTGG+AGG | 0.378838 | 8.3:-4185885 | MS.gene57629:intron |
| AACGAATTTGAAGCGTTTCA+TGG | 0.395000 | 8.3:+4185923 | None:intergenic |
| TAGGTCCACTGAACTTGTGC+TGG | 0.400803 | 8.3:+4184263 | None:intergenic |
| TTGCTTTCCAATCTTGCACT+TGG | 0.407455 | 8.3:-4185888 | MS.gene57629:CDS |
| ACTTCACGTTGTTGTTCGTC+AGG | 0.414100 | 8.3:+4184183 | None:intergenic |
| GTGAAGAGGAAGTTAAAACT+TGG | 0.437712 | 8.3:+4184044 | None:intergenic |
| TGAAACGCTTCAAATTCGTT+TGG | 0.442328 | 8.3:-4185920 | MS.gene57629:CDS |
| GGTTCCTGCCACAATGCCTA+TGG | 0.483180 | 8.3:-4184223 | MS.gene57629:CDS |
| AGGTCCACTGAACTTGTGCT+GGG | 0.487155 | 8.3:+4184264 | None:intergenic |
| ACGAATTTGAAGCGTTTCAT+GGG | 0.492853 | 8.3:+4185924 | None:intergenic |
| GGTAACCCAGTTGGAGGTGC+AGG | 0.493808 | 8.3:+4185945 | None:intergenic |
| CACAATGCCTATGGAAGTGC+GGG | 0.493963 | 8.3:-4184214 | MS.gene57629:CDS |
| TGCAAAACGGAGAGATTCAA+TGG | 0.496763 | 8.3:-4184355 | MS.gene57629:CDS |
| AGGAAGTTAAAACTTGGGTA+TGG | 0.506118 | 8.3:+4184050 | None:intergenic |
| TTCTGTTTGCAAGTGCAAAA+CGG | 0.520014 | 8.3:-4184368 | MS.gene57629:CDS |
| ATTGGAGCCCGCACTTCCAT+AGG | 0.522709 | 8.3:+4184207 | None:intergenic |
| TTCATGGGTAACCCAGTTGG+AGG | 0.533424 | 8.3:+4185939 | None:intergenic |
| CGTTTCATGGGTAACCCAGT+TGG | 0.537789 | 8.3:+4185936 | None:intergenic |
| GTTGGAGGTGCAGGTGAAGG+AGG | 0.550866 | 8.3:+4185954 | None:intergenic |
| CTTCACCTGCACCTCCAACT+GGG | 0.560809 | 8.3:-4185950 | MS.gene57629:CDS |
| CCAGTTGGAGGTGCAGGTGA+AGG | 0.567865 | 8.3:+4185951 | None:intergenic |
| TGAAGAGGAAGTTAAAACTT+GGG | 0.570151 | 8.3:+4184045 | None:intergenic |
| AGTGAAACCAAAGGATGCTA+CGG | 0.578798 | 8.3:-4184130 | MS.gene57629:CDS |
| ACTTCCATAGGCATTGTGGC+AGG | 0.581843 | 8.3:+4184219 | None:intergenic |
| TGAACCCAGCACAAGTTCAG+TGG | 0.591880 | 8.3:-4184268 | MS.gene57629:CDS |
| CCACAATGCCTATGGAAGTG+CGG | 0.595839 | 8.3:-4184215 | MS.gene57629:CDS |
| GAACTTGTGCTGGGTTCAGG+AGG | 0.607480 | 8.3:+4184273 | None:intergenic |
| CCGCACTTCCATAGGCATTG+TGG | 0.608838 | 8.3:+4184215 | None:intergenic |
| GAAAAGAAAAGTGAAACCAA+AGG | 0.630528 | 8.3:-4184139 | MS.gene57629:CDS |
| TGGGTATGGAATTTGCACGC+AGG | 0.712652 | 8.3:+4184064 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATTTAATAAAATATTA+TGG | - | chr8.3:4185219-4185238 | MS.gene57629:intron | 0.0% |
| !!! | AAATATTAACAAATTTTGAT+TGG | - | chr8.3:4185518-4185537 | MS.gene57629:intron | 10.0% |
| !!! | AATATTAACAAATTTTGATT+GGG | - | chr8.3:4185519-4185538 | MS.gene57629:intron | 10.0% |
| !! | TATTTCTTATAATTGATTGA+TGG | - | chr8.3:4184454-4184473 | MS.gene57629:intron | 15.0% |
| !!! | AACTTTTTATCAGTTTAAAA+AGG | - | chr8.3:4185116-4185135 | MS.gene57629:intron | 15.0% |
| !!! | AATGATTTTTATTGCAAAAT+TGG | - | chr8.3:4184706-4184725 | MS.gene57629:intron | 15.0% |
| !!! | ACTTTTTATCAGTTTAAAAA+GGG | - | chr8.3:4185117-4185136 | MS.gene57629:intron | 15.0% |
| !! | AAGTACAAAGAAATATTTCA+TGG | + | chr8.3:4184435-4184454 | None:intergenic | 20.0% |
| !! | AATATAACCATAAGTACTAT+CGG | + | chr8.3:4185167-4185186 | None:intergenic | 20.0% |
| !! | AATTAAAAACATAGAATGAG+AGG | - | chr8.3:4185572-4185591 | MS.gene57629:intron | 20.0% |
| !! | ACAAAACATTTATGCATAAA+AGG | - | chr8.3:4185291-4185310 | MS.gene57629:intron | 20.0% |
| !! | GTTAATATTTGAAAAGAGAT+AGG | + | chr8.3:4185508-4185527 | None:intergenic | 20.0% |
| !! | TATATAATATCTCACTAAGT+AGG | + | chr8.3:4185269-4185288 | None:intergenic | 20.0% |
| !! | TCATATTTACTAAAGACAAT+CGG | + | chr8.3:4184509-4184528 | None:intergenic | 20.0% |
| !! | TGATTGATAAAATTACAACA+TGG | - | chr8.3:4184936-4184955 | MS.gene57629:intron | 20.0% |
| !!! | AAGGAAATTTTTGAATTCAA+AGG | - | chr8.3:4184594-4184613 | MS.gene57629:intron | 20.0% |
| !!! | ATATTATTTGAAATCCTGAA+TGG | + | chr8.3:4184380-4184399 | None:intergenic | 20.0% |
| !!! | GTATTTTAAAAGGAAACTTT+AGG | - | chr8.3:4184854-4184873 | MS.gene57629:intron | 20.0% |
| !!! | TGTACGTTTTGTATTTTAAA+AGG | - | chr8.3:4184844-4184863 | MS.gene57629:intron | 20.0% |
| ! | AAAATACAAAACGTACAAGT+TGG | + | chr8.3:4184841-4184860 | None:intergenic | 25.0% |
| ! | AAAGCTATAAAAGATGTGTT+AGG | + | chr8.3:4184308-4184327 | None:intergenic | 25.0% |
| ! | ACAAAAAAACATCTTTCAAC+TGG | + | chr8.3:4184902-4184921 | None:intergenic | 25.0% |
| ! | AGTTGGACAAAATTTCAATT+AGG | + | chr8.3:4184824-4184843 | None:intergenic | 25.0% |
| ! | CAATATATCAAACACATGAT+AGG | + | chr8.3:4184285-4184304 | None:intergenic | 25.0% |
| ! | CCTGTATAATAGCTATAAAA+AGG | - | chr8.3:4185547-4185566 | MS.gene57629:intron | 25.0% |
| ! | GAATTATCAAATACGTATCA+TGG | + | chr8.3:4185627-4185646 | None:intergenic | 25.0% |
| ! | TACAAAAAATTTACCAAGAG+AGG | + | chr8.3:4185449-4185468 | None:intergenic | 25.0% |
| !! | CCTTTTTATAGCTATTATAC+AGG | + | chr8.3:4185550-4185569 | None:intergenic | 25.0% |
| !! | TTTTCAATCACTGTAATTGT+TGG | - | chr8.3:4184226-4184245 | MS.gene57629:CDS | 25.0% |
| !!! | GTTAAGAAAAAAAGTGTCAA+TGG | - | chr8.3:4185347-4185366 | MS.gene57629:intron | 25.0% |
| AACATTCATTTCGTGAGAAA+AGG | + | chr8.3:4184747-4184766 | None:intergenic | 30.0% | |
| AAGGTGATGCAGTTAAATTA+TGG | - | chr8.3:4184613-4184632 | MS.gene57629:intron | 30.0% | |
| AAGTTGACGAGAAATAAGAA+TGG | + | chr8.3:4184191-4184210 | None:intergenic | 30.0% | |
| AATATCTCACTAAGTAGGAT+TGG | + | chr8.3:4185264-4185283 | None:intergenic | 30.0% | |
| ACATTCATTTCGTGAGAAAA+GGG | + | chr8.3:4184746-4184765 | None:intergenic | 30.0% | |
| CCAAGAAATCTTCGTAATTT+AGG | + | chr8.3:4185781-4185800 | None:intergenic | 30.0% | |
| CCTAAATTACGAAGATTTCT+TGG | - | chr8.3:4185778-4185797 | MS.gene57629:intron | 30.0% | |
| CTCGTCAACTTATGATTAAT+GGG | - | chr8.3:4184200-4184219 | MS.gene57629:CDS | 30.0% | |
| GAAAAGAAAAGTGAAACCAA+AGG | - | chr8.3:4185883-4185902 | MS.gene57629:intron | 30.0% | |
| TAACATCAAAAAGCCTAGAA+GGG | + | chr8.3:4185331-4185350 | None:intergenic | 30.0% | |
| TCTCGTCAACTTATGATTAA+TGG | - | chr8.3:4184199-4184218 | MS.gene57629:CDS | 30.0% | |
| TTAACATCAAAAAGCCTAGA+AGG | + | chr8.3:4185332-4185351 | None:intergenic | 30.0% | |
| TTATAGCTATTATACAGGCT+TGG | + | chr8.3:4185545-4185564 | None:intergenic | 30.0% | |
| ! | ACATTTGACTTTGTTTCAGA+GGG | - | chr8.3:4185389-4185408 | MS.gene57629:intron | 30.0% |
| ! | ATAATTGATTGATGGTTGTG+CGG | - | chr8.3:4184462-4184481 | MS.gene57629:intron | 30.0% |
| ! | ATCGGAGAATTTGTACTTTT+TGG | - | chr8.3:4184793-4184812 | MS.gene57629:intron | 30.0% |
| ! | TACATTTGACTTTGTTTCAG+AGG | - | chr8.3:4185388-4185407 | MS.gene57629:intron | 30.0% |
| !! | TTGTCTTTGTTCGAGTTTTT+GGG | - | chr8.3:4184641-4184660 | MS.gene57629:intron | 30.0% |
| AACTTTGCAAGAAACCATTC+AGG | - | chr8.3:4184363-4184382 | MS.gene57629:CDS | 35.0% | |
| AATATACTGATGTGTGGGAA+TGG | - | chr8.3:4185421-4185440 | MS.gene57629:intron | 35.0% | |
| ACCTACAATATACTGATGTG+TGG | - | chr8.3:4185415-4185434 | MS.gene57629:intron | 35.0% | |
| ACGAGAAATAAGAATGGAGA+TGG | + | chr8.3:4184185-4184204 | None:intergenic | 35.0% | |
| AGTTTGACCGATAGTACTTA+TGG | - | chr8.3:4185157-4185176 | MS.gene57629:intron | 35.0% | |
| CAACATGGTAGTTTAGTGAT+TGG | - | chr8.3:4184951-4184970 | MS.gene57629:intron | 35.0% | |
| CATCATTTGGCATTCAAGAA+AGG | - | chr8.3:4184575-4184594 | MS.gene57629:intron | 35.0% | |
| CCTACAATATACTGATGTGT+GGG | - | chr8.3:4185416-4185435 | MS.gene57629:intron | 35.0% | |
| GACAAAGAAACAACACATTG+TGG | + | chr8.3:4184252-4184271 | None:intergenic | 35.0% | |
| GGGACAAAATCATCAGTAAT+TGG | + | chr8.3:4185063-4185082 | None:intergenic | 35.0% | |
| TGAAACGCTTCAAATTCGTT+TGG | - | chr8.3:4184102-4184121 | MS.gene57629:CDS | 35.0% | |
| TTCTGTTTGCAAGTGCAAAA+CGG | - | chr8.3:4185654-4185673 | MS.gene57629:intron | 35.0% | |
| ! | AAACCGCATCAACTCTTTTA+AGG | + | chr8.3:4185084-4185103 | None:intergenic | 35.0% |
| ! | AACCGCATCAACTCTTTTAA+GGG | + | chr8.3:4185083-4185102 | None:intergenic | 35.0% |
| ! | AACGAATTTGAAGCGTTTCA+TGG | + | chr8.3:4184102-4184121 | None:intergenic | 35.0% |
| ! | ACGAATTTGAAGCGTTTCAT+GGG | + | chr8.3:4184101-4184120 | None:intergenic | 35.0% |
| ! | AGTGTTTCTGTCACATCATT+TGG | - | chr8.3:4184562-4184581 | MS.gene57629:intron | 35.0% |
| ! | ATGTGTCTTATTAAGCTAGC+AGG | - | chr8.3:4184333-4184352 | MS.gene57629:CDS | 35.0% |
| ! | TAATTGATTGATGGTTGTGC+GGG | - | chr8.3:4184463-4184482 | MS.gene57629:intron | 35.0% |
| ! | TTTCAACTGGCTTAACAACT+GGG | + | chr8.3:4184889-4184908 | None:intergenic | 35.0% |
| !! | AACAACGTGAAGTTTTCAAG+TGG | - | chr8.3:4185849-4185868 | MS.gene57629:intron | 35.0% |
| !! | CTTGTCTTTGTTCGAGTTTT+TGG | - | chr8.3:4184640-4184659 | MS.gene57629:intron | 35.0% |
| !! | TGTCTTTGTTCGAGTTTTTG+GGG | - | chr8.3:4184642-4184661 | MS.gene57629:intron | 35.0% |
| !!! | TGAAGTTTTCAAGTGGATTC+TGG | - | chr8.3:4185856-4185875 | MS.gene57629:intron | 35.0% |
| AGTGAAACCAAAGGATGCTA+CGG | - | chr8.3:4185892-4185911 | MS.gene57629:CDS | 40.0% | |
| ATGTAACTGCATGCTGTGAT+CGG | - | chr8.3:4184775-4184794 | MS.gene57629:intron | 40.0% | |
| CCCACACATCAGTATATTGT+AGG | + | chr8.3:4185419-4185438 | None:intergenic | 40.0% | |
| TAACACCATACTTTGCAGTC+TGG | - | chr8.3:4184989-4185008 | MS.gene57629:intron | 40.0% | |
| TGCAAAACGGAGAGATTCAA+TGG | - | chr8.3:4185667-4185686 | MS.gene57629:intron | 40.0% | |
| TTGCTTTCCAATCTTGCACT+TGG | - | chr8.3:4184134-4184153 | MS.gene57629:CDS | 40.0% | |
| ! | CTTTCAACTGGCTTAACAAC+TGG | + | chr8.3:4184890-4184909 | None:intergenic | 40.0% |
| ! | TTCAACTGGCTTAACAACTG+GGG | + | chr8.3:4184888-4184907 | None:intergenic | 40.0% |
| ! | TTTTTCTCCGTAGCATCCTT+TGG | + | chr8.3:4185902-4185921 | None:intergenic | 40.0% |
| !! | ACTAAGTAGGATTGGCTACA+TGG | + | chr8.3:4185256-4185275 | None:intergenic | 40.0% |
| !! | CTAAGTAGGATTGGCTACAT+GGG | + | chr8.3:4185255-4185274 | None:intergenic | 40.0% |
| !! | GTCCCTTAAAAGAGTTGATG+CGG | - | chr8.3:4185078-4185097 | MS.gene57629:intron | 40.0% |
| ACCATACTTTGCAGTCTGGT+AGG | - | chr8.3:4184993-4185012 | MS.gene57629:intron | 45.0% | |
| CCATACTTTGCAGTCTGGTA+GGG | - | chr8.3:4184994-4185013 | MS.gene57629:intron | 45.0% | |
| CTAGAAGGGTTGAGAAGTTG+AGG | + | chr8.3:4185317-4185336 | None:intergenic | 45.0% | |
| CTCAACTTCTCAACCCTTCT+AGG | - | chr8.3:4185315-4185334 | MS.gene57629:intron | 45.0% | |
| CTTTCCAATCTTGCACTTGG+AGG | - | chr8.3:4184137-4184156 | MS.gene57629:CDS | 45.0% | |
| GTAGAGACAGTGACTTCACA+TGG | + | chr8.3:4185041-4185060 | None:intergenic | 45.0% | |
| ! | ACTTCACGTTGTTGTTCGTC+AGG | + | chr8.3:4185842-4185861 | None:intergenic | 45.0% |
| ! | ATTGATGGTTGTGCGGGAAA+AGG | - | chr8.3:4184469-4184488 | MS.gene57629:intron | 45.0% |
| ! | CGTTGTTGTTCGTCAGGAAT+TGG | + | chr8.3:4185836-4185855 | None:intergenic | 45.0% |
| !! | GTTCGAGTTTTTGGGGACAT+GGG | - | chr8.3:4184649-4184668 | MS.gene57629:intron | 45.0% |
| !! | TGTTCGAGTTTTTGGGGACA+TGG | - | chr8.3:4184648-4184667 | MS.gene57629:intron | 45.0% |
| ACTGAACTTGTGCTGGGTTC+AGG | + | chr8.3:4185755-4185774 | None:intergenic | 50.0% | |
| AGGTCCACTGAACTTGTGCT+GGG | + | chr8.3:4185761-4185780 | None:intergenic | 50.0% | |
| CCACAATGCCTATGGAAGTG+CGG | - | chr8.3:4185807-4185826 | MS.gene57629:intron | 50.0% | |
| CCCTACCAGACTGCAAAGTA+TGG | + | chr8.3:4184997-4185016 | None:intergenic | 50.0% | |
| CGTTTCATGGGTAACCCAGT+TGG | + | chr8.3:4184089-4184108 | None:intergenic | 50.0% | |
| CTGACCTCCAAGTGCAAGAT+TGG | + | chr8.3:4184144-4184163 | None:intergenic | 50.0% | |
| TAGGTCCACTGAACTTGTGC+TGG | + | chr8.3:4185762-4185781 | None:intergenic | 50.0% | |
| TGAACCCAGCACAAGTTCAG+TGG | - | chr8.3:4185754-4185773 | MS.gene57629:intron | 50.0% | |
| TGGGTATGGAATTTGCACGC+AGG | + | chr8.3:4185961-4185980 | None:intergenic | 50.0% | |
| TGTGGGAATGGTTCCTCTCT+TGG | - | chr8.3:4185433-4185452 | MS.gene57629:intron | 50.0% | |
| TTCATGGGTAACCCAGTTGG+AGG | + | chr8.3:4184086-4184105 | None:intergenic | 50.0% | |
| ! | ACTTCCATAGGCATTGTGGC+AGG | + | chr8.3:4185806-4185825 | None:intergenic | 50.0% |
| ! | CACAATGCCTATGGAAGTGC+GGG | - | chr8.3:4185808-4185827 | MS.gene57629:intron | 50.0% |
| !! | ACATGGGAAGGAGCATCTAC+GGG | - | chr8.3:4184665-4184684 | MS.gene57629:intron | 50.0% |
| !! | GACATGGGAAGGAGCATCTA+CGG | - | chr8.3:4184664-4184683 | MS.gene57629:intron | 50.0% |
| !! | GAGTTTTTGGGGACATGGGA+AGG | - | chr8.3:4184653-4184672 | MS.gene57629:intron | 50.0% |
| ATTGGAGCCCGCACTTCCAT+AGG | + | chr8.3:4185818-4185837 | None:intergenic | 55.0% | |
| CTTCACCTGCACCTCCAACT+GGG | - | chr8.3:4184072-4184091 | MS.gene57629:CDS | 55.0% | |
| GAACTTGTGCTGGGTTCAGG+AGG | + | chr8.3:4185752-4185771 | None:intergenic | 55.0% | |
| GGTTCCTGCCACAATGCCTA+TGG | - | chr8.3:4185799-4185818 | MS.gene57629:intron | 55.0% | |
| ! | CCGCACTTCCATAGGCATTG+TGG | + | chr8.3:4185810-4185829 | None:intergenic | 55.0% |
| CCTTCACCTGCACCTCCAAC+TGG | - | chr8.3:4184071-4184090 | MS.gene57629:CDS | 60.0% | |
| ! | CCAGTTGGAGGTGCAGGTGA+AGG | + | chr8.3:4184074-4184093 | None:intergenic | 60.0% |
| ! | GGTAACCCAGTTGGAGGTGC+AGG | + | chr8.3:4184080-4184099 | None:intergenic | 60.0% |
| ! | GTTGGAGGTGCAGGTGAAGG+AGG | + | chr8.3:4184071-4184090 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 4184056 | 4185988 | 4184056 | ID=MS.gene57629 |
| chr8.3 | mRNA | 4184056 | 4185988 | 4184056 | ID=MS.gene57629.t1;Parent=MS.gene57629 |
| chr8.3 | exon | 4185886 | 4185988 | 4185886 | ID=MS.gene57629.t1.exon1;Parent=MS.gene57629.t1 |
| chr8.3 | CDS | 4185886 | 4185988 | 4185886 | ID=cds.MS.gene57629.t1;Parent=MS.gene57629.t1 |
| chr8.3 | exon | 4184056 | 4184393 | 4184056 | ID=MS.gene57629.t1.exon2;Parent=MS.gene57629.t1 |
| chr8.3 | CDS | 4184056 | 4184393 | 4184056 | ID=cds.MS.gene57629.t1;Parent=MS.gene57629.t1 |
| Gene Sequence |
| Protein sequence |
