Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57869.t1 | XP_003616443.2 | 97.6 | 493 | 12 | 0 | 1 | 493 | 1 | 493 | 3.60E-273 | 950.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57869.t1 | Q9CAY3 | 73.6 | 492 | 126 | 3 | 3 | 492 | 12 | 501 | 1.0e-207 | 724.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57869.t1 | G7KGS4 | 97.6 | 493 | 12 | 0 | 1 | 493 | 1 | 493 | 2.6e-273 | 950.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053568 | MS.gene57869 | 0.80051 | 1.39E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57869 | MS.gene84826 | PPI |
| MS.gene57869 | MS.gene056794 | PPI |
| MS.gene019646 | MS.gene57869 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57869.t1 | MTR_5g080360 | 97.566 | 493 | 12 | 0 | 1 | 493 | 1 | 493 | 0.0 | 985 |
| MS.gene57869.t1 | MTR_1g040500 | 51.992 | 477 | 216 | 5 | 3 | 472 | 21 | 491 | 4.90e-168 | 486 |
| MS.gene57869.t1 | MTR_7g067380 | 51.477 | 474 | 221 | 3 | 2 | 472 | 24 | 491 | 6.11e-163 | 471 |
| MS.gene57869.t1 | MTR_4g415290 | 50.837 | 478 | 225 | 4 | 2 | 475 | 21 | 492 | 2.86e-159 | 461 |
| MS.gene57869.t1 | MTR_8g030620 | 47.170 | 477 | 242 | 5 | 2 | 473 | 27 | 498 | 1.44e-146 | 429 |
| MS.gene57869.t1 | MTR_5g091660 | 45.094 | 479 | 249 | 6 | 2 | 476 | 65 | 533 | 1.06e-140 | 416 |
| MS.gene57869.t1 | MTR_3g448430 | 43.685 | 483 | 239 | 12 | 3 | 472 | 49 | 511 | 1.01e-126 | 379 |
| MS.gene57869.t1 | MTR_5g061520 | 40.461 | 477 | 267 | 8 | 3 | 473 | 17 | 482 | 5.46e-118 | 355 |
| MS.gene57869.t1 | MTR_1g086650 | 41.164 | 481 | 256 | 12 | 3 | 472 | 65 | 529 | 1.21e-115 | 351 |
| MS.gene57869.t1 | MTR_3g048330 | 54.851 | 268 | 116 | 3 | 209 | 472 | 7 | 273 | 2.27e-95 | 290 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57869.t1 | AT3G11430 | 73.577 | 492 | 126 | 3 | 3 | 492 | 12 | 501 | 0.0 | 752 |
| MS.gene57869.t1 | AT5G06090 | 72.358 | 492 | 132 | 3 | 3 | 492 | 10 | 499 | 0.0 | 718 |
| MS.gene57869.t1 | AT2G38110 | 48.109 | 476 | 235 | 3 | 3 | 472 | 25 | 494 | 1.45e-146 | 429 |
| MS.gene57869.t1 | AT4G00400 | 46.751 | 477 | 244 | 6 | 2 | 473 | 22 | 493 | 1.64e-140 | 414 |
| MS.gene57869.t1 | AT1G01610 | 47.699 | 478 | 239 | 7 | 2 | 473 | 22 | 494 | 1.48e-138 | 409 |
| MS.gene57869.t1 | AT1G06520 | 43.548 | 496 | 240 | 11 | 2 | 472 | 104 | 584 | 3.10e-133 | 398 |
| MS.gene57869.t1 | AT3G11325 | 60.345 | 290 | 82 | 1 | 201 | 490 | 134 | 390 | 2.58e-117 | 350 |
| MS.gene57869.t1 | AT3G11325 | 57.143 | 105 | 45 | 0 | 12 | 116 | 9 | 113 | 5.66e-34 | 132 |
| MS.gene57869.t1 | AT3G11325 | 60.345 | 290 | 82 | 1 | 201 | 490 | 131 | 387 | 3.57e-117 | 350 |
| MS.gene57869.t1 | AT3G11325 | 57.143 | 105 | 45 | 0 | 12 | 116 | 6 | 110 | 5.88e-34 | 132 |
| MS.gene57869.t1 | AT1G02390 | 41.988 | 493 | 246 | 15 | 3 | 472 | 52 | 527 | 6.80e-112 | 341 |
| MS.gene57869.t1 | AT4G01950 | 41.322 | 484 | 258 | 14 | 3 | 472 | 46 | 517 | 1.33e-108 | 332 |
| MS.gene57869.t1 | AT4G01950 | 41.513 | 489 | 250 | 15 | 3 | 472 | 74 | 545 | 6.35e-108 | 332 |
Find 148 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCACATGTCAAGATTATT+TGG | 0.150256 | 5.2:-68227044 | MS.gene57869:CDS |
| CAATATCCTTTGAACATAAT+TGG | 0.202872 | 5.2:+68226503 | None:intergenic |
| AGATCATCCATGAAGAATTT+TGG | 0.219011 | 5.2:+68228609 | None:intergenic |
| GCTGGCTATCATTGTGCTTT+TGG | 0.221316 | 5.2:+68227222 | None:intergenic |
| TTACGTGCAGATGAAGTAAT+TGG | 0.248051 | 5.2:-68228489 | MS.gene57869:CDS |
| TTACTCGAAAAGATAAATAT+AGG | 0.294416 | 5.2:-68226449 | MS.gene57869:CDS |
| CAATTATGTTCAAAGGATAT+TGG | 0.310416 | 5.2:-68226502 | MS.gene57869:CDS |
| TCCCAAGGTTAATCTGATTA+TGG | 0.312514 | 5.2:+68227091 | None:intergenic |
| ATACTCTATTTCTCGGTTAT+CGG | 0.316529 | 5.2:-68226880 | MS.gene57869:CDS |
| ATAGAGCACTAAATCGTAAA+AGG | 0.319770 | 5.2:+68226727 | None:intergenic |
| TTATAGTACCTGGCAAAGTT+TGG | 0.321027 | 5.2:+68228305 | None:intergenic |
| TCGCGACATGTCGTTCCTTC+TGG | 0.322328 | 5.2:+68226756 | None:intergenic |
| AAAAGATAAATATAGGGTTT+TGG | 0.322909 | 5.2:-68226442 | MS.gene57869:CDS |
| CCGCCTGCGGAGGGAGGGAG+AGG | 0.341597 | 5.2:+68226993 | None:intergenic |
| CCTCCCTACTAATCATCCTT+TGG | 0.351925 | 5.2:-68227136 | MS.gene57869:CDS |
| TACTCGAAAAGATAAATATA+GGG | 0.353770 | 5.2:-68226448 | MS.gene57869:CDS |
| CCTCCCTCCGCAGGCGGCCC+CGG | 0.355972 | 5.2:-68226987 | MS.gene57869:CDS |
| AACAAATGCAACCACCATTT+AGG | 0.356648 | 5.2:-68227250 | MS.gene57869:CDS |
| TGCAAGGGGTTGGAAGGGTT+TGG | 0.357093 | 5.2:-68226634 | MS.gene57869:CDS |
| AATCTCAGATTTATGAATTC+CGG | 0.371744 | 5.2:+68228656 | None:intergenic |
| CATCGTGTCTTGTACTTCAT+TGG | 0.372552 | 5.2:-68226406 | MS.gene57869:CDS |
| ATGATTAGTAGGGAGGTTAA+TGG | 0.373547 | 5.2:+68227143 | None:intergenic |
| CCATACCCAACTTTGGAACT+TGG | 0.375224 | 5.2:+68228367 | None:intergenic |
| GTGTACTCACCGCACTCTAA+TGG | 0.376230 | 5.2:-68226952 | MS.gene57869:CDS |
| TAATCCTATGGCCCGTGATT+CGG | 0.383281 | 5.2:-68228740 | MS.gene57869:CDS |
| TACTTTCTTGAACCAGTTGC+CGG | 0.390520 | 5.2:-68226568 | MS.gene57869:CDS |
| CTTCATGTTAGTAGCGTTTG+AGG | 0.391660 | 5.2:-68228793 | MS.gene57869:CDS |
| AATAGGTTTGGTTTAGCTAC+AGG | 0.398808 | 5.2:-68228450 | MS.gene57869:CDS |
| GACGAACATGTGGCTTCAAC+CGG | 0.402068 | 5.2:+68226549 | None:intergenic |
| ATGTGAGGAATGGCCCAAAA+AGG | 0.402197 | 5.2:+68227059 | None:intergenic |
| GTTAGTCTCACGGTAGGAAT+GGG | 0.403818 | 5.2:+68226846 | None:intergenic |
| GTAACCTCATAAACTGGTCT+TGG | 0.404829 | 5.2:+68226588 | None:intergenic |
| CCGGATGAGGTCGGAGAAGC+TGG | 0.406448 | 5.2:+68227204 | None:intergenic |
| AATAACCAAGTTCCAAAGTT+GGG | 0.409025 | 5.2:-68228372 | MS.gene57869:CDS |
| TTCTTTCTCCAAACTTTGCC+AGG | 0.409775 | 5.2:-68228313 | MS.gene57869:intron |
| ACAAACAACTAAATCTCCTT+TGG | 0.410080 | 5.2:+68226779 | None:intergenic |
| AGGATATTGGCTGCAACTCT+AGG | 0.410254 | 5.2:-68226489 | MS.gene57869:CDS |
| AAGAAAGTAACCTCATAAAC+TGG | 0.410853 | 5.2:+68226582 | None:intergenic |
| TGAAGTAATTGGGAGTGAAT+TGG | 0.411804 | 5.2:-68228478 | MS.gene57869:CDS |
| AGCGTCCACATTTCGCATCC+TGG | 0.432122 | 5.2:+68226824 | None:intergenic |
| CGGGGCCGCCTGCGGAGGGA+GGG | 0.433345 | 5.2:+68226988 | None:intergenic |
| CCGGGGCCGCCTGCGGAGGG+AGG | 0.436986 | 5.2:+68226987 | None:intergenic |
| GAATCCAAAGGATGATTAGT+AGG | 0.437047 | 5.2:+68227132 | None:intergenic |
| GGGTTCATGAAGAAGAAAAC+CGG | 0.438572 | 5.2:+68226609 | None:intergenic |
| TATGGCTAGTAATATACCTA+TGG | 0.440019 | 5.2:+68227109 | None:intergenic |
| GGTTAGTCTCACGGTAGGAA+TGG | 0.440830 | 5.2:+68226845 | None:intergenic |
| AGCCTTGCCATACCCAACTT+TGG | 0.442432 | 5.2:+68228360 | None:intergenic |
| CAATAACCAAGTTCCAAAGT+TGG | 0.452601 | 5.2:-68228373 | MS.gene57869:CDS |
| TAACCTCATAAACTGGTCTT+GGG | 0.452875 | 5.2:+68226589 | None:intergenic |
| CGGTAACATACTCTATTTCT+CGG | 0.456428 | 5.2:-68226887 | MS.gene57869:CDS |
| CACATCGTGTGGACTCTTCC+CGG | 0.458052 | 5.2:+68226527 | None:intergenic |
| TTAGTAGCGTTTGAGGCCTC+AGG | 0.458129 | 5.2:-68228786 | MS.gene57869:CDS |
| GAACCCAAGACCAGTTTATG+AGG | 0.459966 | 5.2:-68226592 | MS.gene57869:CDS |
| ATGTGGCTTCAACCGGCAAC+TGG | 0.460408 | 5.2:+68226556 | None:intergenic |
| ACACCGGGGCCGCCTGCGGA+GGG | 0.460445 | 5.2:+68226984 | None:intergenic |
| CGGCCGTCGTGGAAGATAAC+CGG | 0.466207 | 5.2:+68227185 | None:intergenic |
| GAACCCTACTCTATAGTTCA+TGG | 0.467040 | 5.2:+68226671 | None:intergenic |
| GTTGAAGCCACATGTTCGTC+CGG | 0.467761 | 5.2:-68226546 | MS.gene57869:CDS |
| TCGTTCTGCTATTAATCCTA+TGG | 0.468159 | 5.2:-68228752 | MS.gene57869:CDS |
| ATTGGTTGATCAAGTAAAGA+AGG | 0.479552 | 5.2:-68226388 | MS.gene57869:CDS |
| GATTTAGTTGTTTGTCCAGA+AGG | 0.481237 | 5.2:-68226771 | MS.gene57869:CDS |
| GTGTAGGCCGCTTCACCAAT+CGG | 0.482482 | 5.2:+68227165 | None:intergenic |
| ACTCTATAGTTCATGGCAAC+CGG | 0.483007 | 5.2:+68226678 | None:intergenic |
| CCAGCTTCTCCGACCTCATC+CGG | 0.484716 | 5.2:-68227204 | MS.gene57869:CDS |
| AGATTTATGAATTCCGGCTA+TGG | 0.486205 | 5.2:+68228662 | None:intergenic |
| AACCCCTTGCAGTGGTTGCA+TGG | 0.489933 | 5.2:+68226646 | None:intergenic |
| TACGTGCAGATGAAGTAATT+GGG | 0.490722 | 5.2:-68228488 | MS.gene57869:CDS |
| CCACCTCTCCCTCCCTCCGC+AGG | 0.490767 | 5.2:-68226996 | MS.gene57869:CDS |
| CTCTTATGAGAAAAGGGTTG+TGG | 0.493027 | 5.2:-68228559 | MS.gene57869:CDS |
| AACACCGGGGCCGCCTGCGG+AGG | 0.495682 | 5.2:+68226983 | None:intergenic |
| TCAGTTGTCTCTGAATTAGA+AGG | 0.500272 | 5.2:-68228849 | MS.gene57869:CDS |
| CCTCCATGCCGAACATGTCT+AGG | 0.500915 | 5.2:+68228715 | None:intergenic |
| TTTAGCAACTCTTTCAGAAA+CGG | 0.500932 | 5.2:+68228401 | None:intergenic |
| GGGTTGGAAGGGTTTGGACC+CGG | 0.513399 | 5.2:-68226628 | MS.gene57869:CDS |
| GGTGGCAAAGTTATTGTGAA+GGG | 0.518531 | 5.2:-68227023 | MS.gene57869:CDS |
| ATTCGGTTCCTAGACATGTT+CGG | 0.519097 | 5.2:-68228723 | MS.gene57869:CDS |
| TATCTTCCACGACGGCCGAT+TGG | 0.522796 | 5.2:-68227180 | MS.gene57869:CDS |
| AACCACTGCAAGGGGTTGGA+AGG | 0.523750 | 5.2:-68226640 | MS.gene57869:CDS |
| CCAAGTTCCAAAGTTGGGTA+TGG | 0.524716 | 5.2:-68228367 | MS.gene57869:CDS |
| TATGGTGAAGAGGTTTGTTG+AGG | 0.528470 | 5.2:-68228517 | MS.gene57869:CDS |
| AGCCATAATCAGATTAACCT+TGG | 0.529275 | 5.2:-68227093 | MS.gene57869:CDS |
| GCCATAATCAGATTAACCTT+GGG | 0.530102 | 5.2:-68227092 | MS.gene57869:CDS |
| CTTCCATGCAACCACTGCAA+GGG | 0.532313 | 5.2:-68226649 | MS.gene57869:CDS |
| ATGCAACCACTGCAAGGGGT+TGG | 0.533517 | 5.2:-68226644 | MS.gene57869:CDS |
| GGATATTGGCTGCAACTCTA+GGG | 0.537098 | 5.2:-68226488 | MS.gene57869:CDS |
| CCTGCGGAGGGAGGGAGAGG+TGG | 0.537490 | 5.2:+68226996 | None:intergenic |
| AACCTCTTCACCATAACTCC+TGG | 0.538516 | 5.2:+68228525 | None:intergenic |
| ATGATCTTCGTAGCCATAGC+CGG | 0.545870 | 5.2:-68228675 | MS.gene57869:CDS |
| GAAATAGAGTATGTTACCGC+TGG | 0.548665 | 5.2:+68226891 | None:intergenic |
| TGGTGGCAAAGTTATTGTGA+AGG | 0.548955 | 5.2:-68227024 | MS.gene57869:CDS |
| AAACGCTACTAACATGAAGT+AGG | 0.553250 | 5.2:+68228797 | None:intergenic |
| ACCACTGCAAGGGGTTGGAA+GGG | 0.554018 | 5.2:-68226639 | MS.gene57869:CDS |
| ACATAATTGGCCACATCGTG+TGG | 0.555416 | 5.2:+68226516 | None:intergenic |
| TCGCATCCTGGTTAGTCTCA+CGG | 0.556814 | 5.2:+68226836 | None:intergenic |
| ACGACGGCCGATTGGTGAAG+CGG | 0.557445 | 5.2:-68227172 | MS.gene57869:CDS |
| TTCCATGCAACCACTGCAAG+GGG | 0.559446 | 5.2:-68226648 | MS.gene57869:CDS |
| CACATGTCAAGATTATTTGG+TGG | 0.561180 | 5.2:-68227041 | MS.gene57869:CDS |
| GCACTAAATCGTAAAAGGAA+AGG | 0.562800 | 5.2:+68226732 | None:intergenic |
| TAATCTTGACATGTGAGGAA+TGG | 0.563106 | 5.2:+68227049 | None:intergenic |
| ATGTCTAGGAACCGAATCAC+GGG | 0.563811 | 5.2:+68228729 | None:intergenic |
| ATGTGGCCAATTATGTTCAA+AGG | 0.565821 | 5.2:-68226509 | MS.gene57869:CDS |
| ATCATCCTTTGGATTCCCAT+AGG | 0.567783 | 5.2:-68227125 | MS.gene57869:CDS |
| TGCCAGGAGTTATGGTGAAG+AGG | 0.568451 | 5.2:-68228527 | MS.gene57869:CDS |
| ACCCTTCCAACCCCTTGCAG+TGG | 0.568618 | 5.2:+68226638 | None:intergenic |
| AAAAGGTAAAATGGCTCCCA+AGG | 0.569333 | 5.2:+68227076 | None:intergenic |
| GGAAGATAACCGGATGAGGT+CGG | 0.569958 | 5.2:+68227195 | None:intergenic |
| GTTCCTAGACATGTTCGGCA+TGG | 0.571934 | 5.2:-68228718 | MS.gene57869:CDS |
| ATGATCTTGACATGGAAGCT+TGG | 0.575350 | 5.2:-68228593 | MS.gene57869:CDS |
| TTGAAGCCACATGTTCGTCC+GGG | 0.575686 | 5.2:-68226545 | MS.gene57869:CDS |
| TTCCAAAGTTGGGTATGGCA+AGG | 0.576401 | 5.2:-68228362 | MS.gene57869:CDS |
| ATGGCTAGTAATATACCTAT+GGG | 0.576541 | 5.2:+68227110 | None:intergenic |
| TTGCCATGAACTATAGAGTA+GGG | 0.580288 | 5.2:-68226674 | MS.gene57869:CDS |
| CTTCATGGATGATCTTGACA+TGG | 0.581073 | 5.2:-68228601 | MS.gene57869:CDS |
| TCTTCCATGCAACCACTGCA+AGG | 0.581170 | 5.2:-68226650 | MS.gene57869:CDS |
| AGTAGGGAGGTTAATGGTGT+AGG | 0.581490 | 5.2:+68227149 | None:intergenic |
| AAGAACACCGGGGCCGCCTG+CGG | 0.582203 | 5.2:+68226980 | None:intergenic |
| TACGTTGGAGGACGGAAGAG+AGG | 0.586719 | 5.2:+68226919 | None:intergenic |
| AGGACGGAAGAGAGGACCAC+AGG | 0.587085 | 5.2:+68226927 | None:intergenic |
| GGAACCGAATCACGGGCCAT+AGG | 0.587795 | 5.2:+68228736 | None:intergenic |
| ATAAAATATGAGTTATCCAA+AGG | 0.588127 | 5.2:-68226795 | MS.gene57869:CDS |
| TCGTGGAAGATAACCGGATG+AGG | 0.592639 | 5.2:+68227191 | None:intergenic |
| AATCCAAAGGATGATTAGTA+GGG | 0.594053 | 5.2:+68227133 | None:intergenic |
| ACTAACCAGGATGCGAAATG+TGG | 0.596166 | 5.2:-68226829 | MS.gene57869:CDS |
| ACTCTTCCCGGACGAACATG+TGG | 0.597450 | 5.2:+68226539 | None:intergenic |
| GCTTCACCAATCGGCCGTCG+TGG | 0.597938 | 5.2:+68227174 | None:intergenic |
| TTAGTCTCACGGTAGGAATG+GGG | 0.605101 | 5.2:+68226847 | None:intergenic |
| CCTCTCCCTCCCTCCGCAGG+CGG | 0.606101 | 5.2:-68226993 | MS.gene57869:CDS |
| CCAAATAATCTTGACATGTG+AGG | 0.613846 | 5.2:+68227044 | None:intergenic |
| CATGTCTAGGAACCGAATCA+CGG | 0.613979 | 5.2:+68228728 | None:intergenic |
| CCAAAGGATGATTAGTAGGG+AGG | 0.617133 | 5.2:+68227136 | None:intergenic |
| TAGTCTCACGGTAGGAATGG+GGG | 0.621006 | 5.2:+68226848 | None:intergenic |
| GATCATTATTATGGTAAACA+AGG | 0.622764 | 5.2:+68226348 | None:intergenic |
| ACTCACAGATCGGATAGTAC+CGG | 0.630574 | 5.2:-68226697 | MS.gene57869:CDS |
| GGACGGAAGAGAGGACCACA+GGG | 0.633576 | 5.2:+68226928 | None:intergenic |
| TTCCTACCGTGAGACTAACC+AGG | 0.633579 | 5.2:-68226842 | MS.gene57869:CDS |
| GTTGCCATGAACTATAGAGT+AGG | 0.638820 | 5.2:-68226675 | MS.gene57869:CDS |
| CGGGAAGAGTCCACACGATG+TGG | 0.640851 | 5.2:-68226526 | MS.gene57869:CDS |
| CCTAGACATGTTCGGCATGG+AGG | 0.648261 | 5.2:-68228715 | MS.gene57869:CDS |
| GGTTCATGAAGAAGAAAACC+GGG | 0.655673 | 5.2:+68226610 | None:intergenic |
| TATTTGCAGAACTCACAGAT+CGG | 0.656460 | 5.2:-68226707 | MS.gene57869:CDS |
| CATCCGGTTATCTTCCACGA+CGG | 0.663414 | 5.2:-68227188 | MS.gene57869:CDS |
| ATATACCTATGGGAATCCAA+AGG | 0.666680 | 5.2:+68227120 | None:intergenic |
| GGTTGATCAAGTAAAGAAGG+TGG | 0.673976 | 5.2:-68226385 | MS.gene57869:CDS |
| ATCCTGGTTAGTCTCACGGT+AGG | 0.682353 | 5.2:+68226840 | None:intergenic |
| AACGAAGCGAATCAAACCTG+AGG | 0.685586 | 5.2:+68228770 | None:intergenic |
| CCACAGGGTCCATTAGAGTG+CGG | 0.712721 | 5.2:+68226943 | None:intergenic |
| CCTCCAACGTAAAACTCCAG+CGG | 0.722705 | 5.2:-68226907 | MS.gene57869:CDS |
| CCGCACTCTAATGGACCCTG+TGG | 0.755400 | 5.2:-68226943 | MS.gene57869:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTTTTTTTTTTTTATTAG+TGG | - | chr5.2:68227453-68227472 | MS.gene57869:intron | 10.0% |
| !! | AATAGATTAAAAAGAATACA+CGG | + | chr5.2:68227548-68227567 | None:intergenic | 15.0% |
| !! | GAAACATATTTAAAAAAAGA+CGG | + | chr5.2:68227082-68227101 | None:intergenic | 15.0% |
| !!! | TATTTCAACGAATAATTTTT+TGG | - | chr5.2:68226995-68227014 | MS.gene57869:CDS | 15.0% |
| !! | ATAAAATATGAGTTATCCAA+AGG | - | chr5.2:68228416-68228435 | MS.gene57869:CDS | 20.0% |
| !! | ATAGATTAAAAAGAATACAC+GGG | + | chr5.2:68227547-68227566 | None:intergenic | 20.0% |
| !! | ATGAATGAAAAAATTCGATT+TGG | - | chr5.2:68226956-68226975 | MS.gene57869:CDS | 20.0% |
| !! | CTTATAAGAAACAACAAAAT+TGG | + | chr5.2:68227719-68227738 | None:intergenic | 20.0% |
| !! | GTTAAATAAATTATAGTACC+TGG | + | chr5.2:68226919-68226938 | None:intergenic | 20.0% |
| !! | TAAATAGACTCGAAAATTAT+GGG | + | chr5.2:68227643-68227662 | None:intergenic | 20.0% |
| !! | TACTCGAAAAGATAAATATA+GGG | - | chr5.2:68228763-68228782 | MS.gene57869:CDS | 20.0% |
| !! | TTACTCGAAAAGATAAATAT+AGG | - | chr5.2:68228762-68228781 | MS.gene57869:CDS | 20.0% |
| !!! | AAAAGATAAATATAGGGTTT+TGG | - | chr5.2:68228769-68228788 | MS.gene57869:CDS | 20.0% |
| !!! | AATTGTATACGAACAAATTT+TGG | + | chr5.2:68227172-68227191 | None:intergenic | 20.0% |
| !!! | AGAAACAAAATTTTATTCCA+AGG | - | chr5.2:68227340-68227359 | MS.gene57869:intron | 20.0% |
| !!! | ATTGTATACGAACAAATTTT+GGG | + | chr5.2:68227171-68227190 | None:intergenic | 20.0% |
| !!! | TTTTTCTCAAAATTGTCATT+TGG | - | chr5.2:68227047-68227066 | MS.gene57869:CDS | 20.0% |
| ! | AATCTCAGATTTATGAATTC+CGG | + | chr5.2:68226558-68226577 | None:intergenic | 25.0% |
| ! | ACAACTATAAGCCATATTAT+AGG | + | chr5.2:68227301-68227320 | None:intergenic | 25.0% |
| ! | CAATATCCTTTGAACATAAT+TGG | + | chr5.2:68228711-68228730 | None:intergenic | 25.0% |
| ! | CAATTATGTTCAAAGGATAT+TGG | - | chr5.2:68228709-68228728 | MS.gene57869:CDS | 25.0% |
| ! | GTAAATAGACTCGAAAATTA+TGG | + | chr5.2:68227644-68227663 | None:intergenic | 25.0% |
| ! | TAAGTGTAAGTATTCCAAAA+GGG | - | chr5.2:68227268-68227287 | MS.gene57869:intron | 25.0% |
| ! | TAATATGGCTTATAGTTGTT+TGG | - | chr5.2:68227302-68227321 | MS.gene57869:intron | 25.0% |
| ! | TTAAGTGTAAGTATTCCAAA+AGG | - | chr5.2:68227267-68227286 | MS.gene57869:intron | 25.0% |
| !!! | ACAAGATTTTGATACTAAAC+AGG | + | chr5.2:68227666-68227685 | None:intergenic | 25.0% |
| !!! | TATGGGTTAAATACGTTTTT+TGG | + | chr5.2:68227626-68227645 | None:intergenic | 25.0% |
| !!! | TTTGCCTTTACTTTTATGTT+CGG | - | chr5.2:68227192-68227211 | MS.gene57869:CDS | 25.0% |
| !!! | TTTTAGCTCTTATGAGAAAA+GGG | - | chr5.2:68226646-68226665 | MS.gene57869:CDS | 25.0% |
| !!! | TTTTTAGCTCTTATGAGAAA+AGG | - | chr5.2:68226645-68226664 | MS.gene57869:CDS | 25.0% |
| AAGAAAGTAACCTCATAAAC+TGG | + | chr5.2:68228632-68228651 | None:intergenic | 30.0% | |
| AATAACCAAGTTCCAAAGTT+GGG | - | chr5.2:68226839-68226858 | MS.gene57869:CDS | 30.0% | |
| AATCCAAAGGATGATTAGTA+GGG | + | chr5.2:68228081-68228100 | None:intergenic | 30.0% | |
| ACAAACAACTAAATCTCCTT+TGG | + | chr5.2:68228435-68228454 | None:intergenic | 30.0% | |
| ATGACCGAACATAAAAGTAA+AGG | + | chr5.2:68227199-68227218 | None:intergenic | 30.0% | |
| ATGGCTAGTAATATACCTAT+GGG | + | chr5.2:68228104-68228123 | None:intergenic | 30.0% | |
| ATTGGTTGATCAAGTAAAGA+AGG | - | chr5.2:68228823-68228842 | MS.gene57869:CDS | 30.0% | |
| TATGGCTAGTAATATACCTA+TGG | + | chr5.2:68228105-68228124 | None:intergenic | 30.0% | |
| TTCATTGCAATTTCTCACTT+TGG | + | chr5.2:68226941-68226960 | None:intergenic | 30.0% | |
| TTTAGCAACTCTTTCAGAAA+CGG | + | chr5.2:68226813-68226832 | None:intergenic | 30.0% | |
| ! | AGATCATCCATGAAGAATTT+TGG | + | chr5.2:68226605-68226624 | None:intergenic | 30.0% |
| ! | AGTTTTGCCAAAATTCTTCA+TGG | - | chr5.2:68226595-68226614 | MS.gene57869:CDS | 30.0% |
| ! | ATACTCTATTTCTCGGTTAT+CGG | - | chr5.2:68228331-68228350 | MS.gene57869:CDS | 30.0% |
| ! | ATAGAGCACTAAATCGTAAA+AGG | + | chr5.2:68228487-68228506 | None:intergenic | 30.0% |
| !!! | ATAAATATAGGGTTTTGGCT+GGG | - | chr5.2:68228774-68228793 | MS.gene57869:CDS | 30.0% |
| !!! | GAATTGGTTTTCAATAGGTT+TGG | - | chr5.2:68226749-68226768 | MS.gene57869:CDS | 30.0% |
| AAACGCTACTAACATGAAGT+AGG | + | chr5.2:68226417-68226436 | None:intergenic | 35.0% | |
| AACAAAAATGCCAGGAGTTA+TGG | - | chr5.2:68226676-68226695 | MS.gene57869:CDS | 35.0% | |
| AACAAATGCAACCACCATTT+AGG | - | chr5.2:68227961-68227980 | MS.gene57869:intron | 35.0% | |
| AATGGCCCAAAAAGGTAAAA+TGG | + | chr5.2:68228147-68228166 | None:intergenic | 35.0% | |
| AGATTTATGAATTCCGGCTA+TGG | + | chr5.2:68226552-68226571 | None:intergenic | 35.0% | |
| AGCCATAATCAGATTAACCT+TGG | - | chr5.2:68228118-68228137 | MS.gene57869:intron | 35.0% | |
| AGGGTGAACTTCCTATAATA+TGG | - | chr5.2:68227287-68227306 | MS.gene57869:intron | 35.0% | |
| AGTACACACAAAAAGAACAC+CGG | + | chr5.2:68228246-68228265 | None:intergenic | 35.0% | |
| ATATACCTATGGGAATCCAA+AGG | + | chr5.2:68228094-68228113 | None:intergenic | 35.0% | |
| ATGATTAGTAGGGAGGTTAA+TGG | + | chr5.2:68228071-68228090 | None:intergenic | 35.0% | |
| ATGTGGCCAATTATGTTCAA+AGG | - | chr5.2:68228702-68228721 | MS.gene57869:CDS | 35.0% | |
| CAATAACCAAGTTCCAAAGT+TGG | - | chr5.2:68226838-68226857 | MS.gene57869:CDS | 35.0% | |
| CACATGTCAAGATTATTTGG+TGG | - | chr5.2:68228170-68228189 | MS.gene57869:intron | 35.0% | |
| CCAAATAATCTTGACATGTG+AGG | + | chr5.2:68228170-68228189 | None:intergenic | 35.0% | |
| CCTCACATGTCAAGATTATT+TGG | - | chr5.2:68228167-68228186 | MS.gene57869:intron | 35.0% | |
| CTCAGATAAAGACTCTTTCA+CGG | - | chr5.2:68227392-68227411 | MS.gene57869:intron | 35.0% | |
| GAATCCAAAGGATGATTAGT+AGG | + | chr5.2:68228082-68228101 | None:intergenic | 35.0% | |
| GATTTAGTTGTTTGTCCAGA+AGG | - | chr5.2:68228440-68228459 | MS.gene57869:CDS | 35.0% | |
| GCACTAAATCGTAAAAGGAA+AGG | + | chr5.2:68228482-68228501 | None:intergenic | 35.0% | |
| GCCATAATCAGATTAACCTT+GGG | - | chr5.2:68228119-68228138 | MS.gene57869:intron | 35.0% | |
| TAATCTTGACATGTGAGGAA+TGG | + | chr5.2:68228165-68228184 | None:intergenic | 35.0% | |
| TACGTGCAGATGAAGTAATT+GGG | - | chr5.2:68226723-68226742 | MS.gene57869:CDS | 35.0% | |
| TATTTGCAGAACTCACAGAT+CGG | - | chr5.2:68228504-68228523 | MS.gene57869:CDS | 35.0% | |
| TCAGATAAAGACTCTTTCAC+GGG | - | chr5.2:68227393-68227412 | MS.gene57869:intron | 35.0% | |
| TCAGTTGTCTCTGAATTAGA+AGG | - | chr5.2:68226362-68226381 | MS.gene57869:CDS | 35.0% | |
| TCCCAAGGTTAATCTGATTA+TGG | + | chr5.2:68228123-68228142 | None:intergenic | 35.0% | |
| TCGTTCTGCTATTAATCCTA+TGG | - | chr5.2:68226459-68226478 | MS.gene57869:CDS | 35.0% | |
| TGAAGTAATTGGGAGTGAAT+TGG | - | chr5.2:68226733-68226752 | MS.gene57869:CDS | 35.0% | |
| TTACGTGCAGATGAAGTAAT+TGG | - | chr5.2:68226722-68226741 | MS.gene57869:CDS | 35.0% | |
| TTATAGTACCTGGCAAAGTT+TGG | + | chr5.2:68226909-68226928 | None:intergenic | 35.0% | |
| TTGCCATGAACTATAGAGTA+GGG | - | chr5.2:68228537-68228556 | MS.gene57869:CDS | 35.0% | |
| TTGGTTCATAAATACGATGG+GGG | - | chr5.2:68227417-68227436 | MS.gene57869:intron | 35.0% | |
| ! | AATAGGTTTGGTTTAGCTAC+AGG | - | chr5.2:68226761-68226780 | MS.gene57869:CDS | 35.0% |
| ! | CGGTAACATACTCTATTTCT+CGG | - | chr5.2:68228324-68228343 | MS.gene57869:CDS | 35.0% |
| ! | GACATATTTTGTATGTGTGC+AGG | - | chr5.2:68227938-68227957 | MS.gene57869:intron | 35.0% |
| ! | GGTTGGTTCATAAATACGAT+GGG | - | chr5.2:68227415-68227434 | MS.gene57869:intron | 35.0% |
| ! | GTTGGTTCATAAATACGATG+GGG | - | chr5.2:68227416-68227435 | MS.gene57869:intron | 35.0% |
| ! | TTATAGGAAGTTCACCCTTT+TGG | + | chr5.2:68227285-68227304 | None:intergenic | 35.0% |
| !! | GATAAATATAGGGTTTTGGC+TGG | - | chr5.2:68228773-68228792 | MS.gene57869:CDS | 35.0% |
| !! | TAACCTCATAAACTGGTCTT+GGG | + | chr5.2:68228625-68228644 | None:intergenic | 35.0% |
| !! | TTATAGTTGTTTGGTGCTTG+TGG | - | chr5.2:68227311-68227330 | MS.gene57869:intron | 35.0% |
| !!! | GGAGTGAATTGGTTTTCAAT+AGG | - | chr5.2:68226744-68226763 | MS.gene57869:CDS | 35.0% |
| AAAAGGTAAAATGGCTCCCA+AGG | + | chr5.2:68228138-68228157 | None:intergenic | 40.0% | |
| ACTCTATAGTTCATGGCAAC+CGG | + | chr5.2:68228536-68228555 | None:intergenic | 40.0% | |
| ATCATCCTTTGGATTCCCAT+AGG | - | chr5.2:68228086-68228105 | MS.gene57869:intron | 40.0% | |
| ATGATCTTGACATGGAAGCT+TGG | - | chr5.2:68226618-68226637 | MS.gene57869:CDS | 40.0% | |
| ATTCGGTTCCTAGACATGTT+CGG | - | chr5.2:68226488-68226507 | MS.gene57869:CDS | 40.0% | |
| CAGATAAAGACTCTTTCACG+GGG | - | chr5.2:68227394-68227413 | MS.gene57869:intron | 40.0% | |
| CATCGTGTCTTGTACTTCAT+TGG | - | chr5.2:68228805-68228824 | MS.gene57869:CDS | 40.0% | |
| CTCTTATGAGAAAAGGGTTG+TGG | - | chr5.2:68226652-68226671 | MS.gene57869:CDS | 40.0% | |
| CTTCATGGATGATCTTGACA+TGG | - | chr5.2:68226610-68226629 | MS.gene57869:CDS | 40.0% | |
| CTTCATGTTAGTAGCGTTTG+AGG | - | chr5.2:68226418-68226437 | MS.gene57869:CDS | 40.0% | |
| GAAATAGAGTATGTTACCGC+TGG | + | chr5.2:68228323-68228342 | None:intergenic | 40.0% | |
| GAACCCTACTCTATAGTTCA+TGG | + | chr5.2:68228543-68228562 | None:intergenic | 40.0% | |
| GGGTTCATGAAGAAGAAAAC+CGG | + | chr5.2:68228605-68228624 | None:intergenic | 40.0% | |
| GGTGGCAAAGTTATTGTGAA+GGG | - | chr5.2:68228188-68228207 | MS.gene57869:intron | 40.0% | |
| GGTTCATGAAGAAGAAAACC+GGG | + | chr5.2:68228604-68228623 | None:intergenic | 40.0% | |
| GGTTGATCAAGTAAAGAAGG+TGG | - | chr5.2:68228826-68228845 | MS.gene57869:CDS | 40.0% | |
| GTACACACAAAAAGAACACC+GGG | + | chr5.2:68228245-68228264 | None:intergenic | 40.0% | |
| GTTGCCATGAACTATAGAGT+AGG | - | chr5.2:68228536-68228555 | MS.gene57869:CDS | 40.0% | |
| GTTGTGGTAACAAAAATGCC+AGG | - | chr5.2:68226668-68226687 | MS.gene57869:CDS | 40.0% | |
| TACACACAAAAAGAACACCG+GGG | + | chr5.2:68228244-68228263 | None:intergenic | 40.0% | |
| TACTTTCTTGAACCAGTTGC+CGG | - | chr5.2:68228643-68228662 | MS.gene57869:CDS | 40.0% | |
| TGATGTTTGCATGTTCACCT+TGG | + | chr5.2:68227360-68227379 | None:intergenic | 40.0% | |
| TGGTGGCAAAGTTATTGTGA+AGG | - | chr5.2:68228187-68228206 | MS.gene57869:intron | 40.0% | |
| TTCTTTCTCCAAACTTTGCC+AGG | - | chr5.2:68226898-68226917 | MS.gene57869:CDS | 40.0% | |
| ! | GTAACCTCATAAACTGGTCT+TGG | + | chr5.2:68228626-68228645 | None:intergenic | 40.0% |
| !! | GGGAGCCATTTTACCTTTTT+GGG | - | chr5.2:68228139-68228158 | MS.gene57869:intron | 40.0% |
| !! | GGGTTGGTTCATAAATACGA+TGG | - | chr5.2:68227414-68227433 | MS.gene57869:intron | 40.0% |
| !! | TATGGTGAAGAGGTTTGTTG+AGG | - | chr5.2:68226694-68226713 | MS.gene57869:CDS | 40.0% |
| !! | TGGGAGCCATTTTACCTTTT+TGG | - | chr5.2:68228138-68228157 | MS.gene57869:intron | 40.0% |
| !!! | TGCTTTTGGCTTGTCCTAAA+TGG | + | chr5.2:68227978-68227997 | None:intergenic | 40.0% |
| !!! | TTTTGGCTTGTCCTAAATGG+TGG | + | chr5.2:68227975-68227994 | None:intergenic | 40.0% |
| AAATACGATGGGGGAGAACT+TGG | - | chr5.2:68227426-68227445 | MS.gene57869:intron | 45.0% | |
| AACCTCTTCACCATAACTCC+TGG | + | chr5.2:68226689-68226708 | None:intergenic | 45.0% | |
| AACGAAGCGAATCAAACCTG+AGG | + | chr5.2:68226444-68226463 | None:intergenic | 45.0% | |
| AATACGATGGGGGAGAACTT+GGG | - | chr5.2:68227427-68227446 | MS.gene57869:intron | 45.0% | |
| ACATAATTGGCCACATCGTG+TGG | + | chr5.2:68228698-68228717 | None:intergenic | 45.0% | |
| ACTAACCAGGATGCGAAATG+TGG | - | chr5.2:68228382-68228401 | MS.gene57869:CDS | 45.0% | |
| ACTCACAGATCGGATAGTAC+CGG | - | chr5.2:68228514-68228533 | MS.gene57869:CDS | 45.0% | |
| AGTAGGGAGGTTAATGGTGT+AGG | + | chr5.2:68228065-68228084 | None:intergenic | 45.0% | |
| ATGATCTTCGTAGCCATAGC+CGG | - | chr5.2:68226536-68226555 | MS.gene57869:CDS | 45.0% | |
| ATGTCTAGGAACCGAATCAC+GGG | + | chr5.2:68226485-68226504 | None:intergenic | 45.0% | |
| ATGTGAGGAATGGCCCAAAA+AGG | + | chr5.2:68228155-68228174 | None:intergenic | 45.0% | |
| CATGTCTAGGAACCGAATCA+CGG | + | chr5.2:68226486-68226505 | None:intergenic | 45.0% | |
| CCAAAGGATGATTAGTAGGG+AGG | + | chr5.2:68228078-68228097 | None:intergenic | 45.0% | |
| CCAAGTTCCAAAGTTGGGTA+TGG | - | chr5.2:68226844-68226863 | MS.gene57869:CDS | 45.0% | |
| CCTCCCTACTAATCATCCTT+TGG | - | chr5.2:68228075-68228094 | MS.gene57869:intron | 45.0% | |
| GAACCCAAGACCAGTTTATG+AGG | - | chr5.2:68228619-68228638 | MS.gene57869:CDS | 45.0% | |
| TAAAGACTCTTTCACGGGGT+TGG | - | chr5.2:68227398-68227417 | MS.gene57869:intron | 45.0% | |
| TAATCCTATGGCCCGTGATT+CGG | - | chr5.2:68226471-68226490 | MS.gene57869:CDS | 45.0% | |
| TTAGTCTCACGGTAGGAATG+GGG | + | chr5.2:68228367-68228386 | None:intergenic | 45.0% | |
| TTCCAAAGTTGGGTATGGCA+AGG | - | chr5.2:68226849-68226868 | MS.gene57869:CDS | 45.0% | |
| ! | AGGATATTGGCTGCAACTCT+AGG | - | chr5.2:68228722-68228741 | MS.gene57869:CDS | 45.0% |
| ! | GCTGGCTATCATTGTGCTTT+TGG | + | chr5.2:68227992-68228011 | None:intergenic | 45.0% |
| ! | GGATATTGGCTGCAACTCTA+GGG | - | chr5.2:68228723-68228742 | MS.gene57869:CDS | 45.0% |
| ! | GTTAGTCTCACGGTAGGAAT+GGG | + | chr5.2:68228368-68228387 | None:intergenic | 45.0% |
| ! | TGGAGTTTTACGTTGGAGGA+CGG | + | chr5.2:68228303-68228322 | None:intergenic | 45.0% |
| ! | TTACCGCTGGAGTTTTACGT+TGG | + | chr5.2:68228310-68228329 | None:intergenic | 45.0% |
| !! | CCATACCCAACTTTGGAACT+TGG | + | chr5.2:68226847-68226866 | None:intergenic | 45.0% |
| !! | AATTAATTTACTTTAAATAT+TGG | - | chr5.2:68227893-68227912 | MS.gene57869:intron | 5.0% |
| !! | ATTAATTTACTTTAAATATT+GGG | - | chr5.2:68227894-68227913 | MS.gene57869:intron | 5.0% |
| AGCCTTGCCATACCCAACTT+TGG | + | chr5.2:68226854-68226873 | None:intergenic | 50.0% | |
| CATCCGGTTATCTTCCACGA+CGG | - | chr5.2:68228023-68228042 | MS.gene57869:intron | 50.0% | |
| CCTCCAACGTAAAACTCCAG+CGG | - | chr5.2:68228304-68228323 | MS.gene57869:intron | 50.0% | |
| CTTCCATGCAACCACTGCAA+GGG | - | chr5.2:68228562-68228581 | MS.gene57869:CDS | 50.0% | |
| GACGAACATGTGGCTTCAAC+CGG | + | chr5.2:68228665-68228684 | None:intergenic | 50.0% | |
| GGAAGATAACCGGATGAGGT+CGG | + | chr5.2:68228019-68228038 | None:intergenic | 50.0% | |
| GTGTACTCACCGCACTCTAA+TGG | - | chr5.2:68228259-68228278 | MS.gene57869:intron | 50.0% | |
| GTTCCTAGACATGTTCGGCA+TGG | - | chr5.2:68226493-68226512 | MS.gene57869:CDS | 50.0% | |
| GTTGAAGCCACATGTTCGTC+CGG | - | chr5.2:68228665-68228684 | MS.gene57869:CDS | 50.0% | |
| TAGTCTCACGGTAGGAATGG+GGG | + | chr5.2:68228366-68228385 | None:intergenic | 50.0% | |
| TCGTGGAAGATAACCGGATG+AGG | + | chr5.2:68228023-68228042 | None:intergenic | 50.0% | |
| TCTTCCATGCAACCACTGCA+AGG | - | chr5.2:68228561-68228580 | MS.gene57869:CDS | 50.0% | |
| TGCCAGGAGTTATGGTGAAG+AGG | - | chr5.2:68226684-68226703 | MS.gene57869:CDS | 50.0% | |
| TTCCATGCAACCACTGCAAG+GGG | - | chr5.2:68228563-68228582 | MS.gene57869:CDS | 50.0% | |
| TTCCTACCGTGAGACTAACC+AGG | - | chr5.2:68228369-68228388 | MS.gene57869:CDS | 50.0% | |
| TTGAAGCCACATGTTCGTCC+GGG | - | chr5.2:68228666-68228685 | MS.gene57869:CDS | 50.0% | |
| ! | TTAGTAGCGTTTGAGGCCTC+AGG | - | chr5.2:68226425-68226444 | MS.gene57869:CDS | 50.0% |
| !! | ATCCTGGTTAGTCTCACGGT+AGG | + | chr5.2:68228374-68228393 | None:intergenic | 50.0% |
| !! | GGTTAGTCTCACGGTAGGAA+TGG | + | chr5.2:68228369-68228388 | None:intergenic | 50.0% |
| !! | TCGCATCCTGGTTAGTCTCA+CGG | + | chr5.2:68228378-68228397 | None:intergenic | 50.0% |
| !!! | AGGGTTTTGGCTGGGAATGA+TGG | - | chr5.2:68228782-68228801 | MS.gene57869:CDS | 50.0% |
| AACCACTGCAAGGGGTTGGA+AGG | - | chr5.2:68228571-68228590 | MS.gene57869:CDS | 55.0% | |
| AACCCCTTGCAGTGGTTGCA+TGG | + | chr5.2:68228568-68228587 | None:intergenic | 55.0% | |
| ACCACTGCAAGGGGTTGGAA+GGG | - | chr5.2:68228572-68228591 | MS.gene57869:CDS | 55.0% | |
| ACTCTTCCCGGACGAACATG+TGG | + | chr5.2:68228675-68228694 | None:intergenic | 55.0% | |
| AGCGTCCACATTTCGCATCC+TGG | + | chr5.2:68228390-68228409 | None:intergenic | 55.0% | |
| ATGCAACCACTGCAAGGGGT+TGG | - | chr5.2:68228567-68228586 | MS.gene57869:CDS | 55.0% | |
| ATGTGGCTTCAACCGGCAAC+TGG | + | chr5.2:68228658-68228677 | None:intergenic | 55.0% | |
| CACATCGTGTGGACTCTTCC+CGG | + | chr5.2:68228687-68228706 | None:intergenic | 55.0% | |
| CCACAGGGTCCATTAGAGTG+CGG | + | chr5.2:68228271-68228290 | None:intergenic | 55.0% | |
| CCTAGACATGTTCGGCATGG+AGG | - | chr5.2:68226496-68226515 | MS.gene57869:CDS | 55.0% | |
| CCTCCATGCCGAACATGTCT+AGG | + | chr5.2:68226499-68226518 | None:intergenic | 55.0% | |
| GTGTAGGCCGCTTCACCAAT+CGG | + | chr5.2:68228049-68228068 | None:intergenic | 55.0% | |
| TACGTTGGAGGACGGAAGAG+AGG | + | chr5.2:68228295-68228314 | None:intergenic | 55.0% | |
| TATCTTCCACGACGGCCGAT+TGG | - | chr5.2:68228031-68228050 | MS.gene57869:intron | 55.0% | |
| TCGCGACATGTCGTTCCTTC+TGG | + | chr5.2:68228458-68228477 | None:intergenic | 55.0% | |
| TGCAAGGGGTTGGAAGGGTT+TGG | - | chr5.2:68228577-68228596 | MS.gene57869:CDS | 55.0% | |
| ! | CCGCTGGAGTTTTACGTTGG+AGG | + | chr5.2:68228307-68228326 | None:intergenic | 55.0% |
| ACCCTTCCAACCCCTTGCAG+TGG | + | chr5.2:68228576-68228595 | None:intergenic | 60.0% | |
| ACGACGGCCGATTGGTGAAG+CGG | - | chr5.2:68228039-68228058 | MS.gene57869:intron | 60.0% | |
| AGGACGGAAGAGAGGACCAC+AGG | + | chr5.2:68228287-68228306 | None:intergenic | 60.0% | |
| CCAGCTTCTCCGACCTCATC+CGG | - | chr5.2:68228007-68228026 | MS.gene57869:intron | 60.0% | |
| CGGCCGTCGTGGAAGATAAC+CGG | + | chr5.2:68228029-68228048 | None:intergenic | 60.0% | |
| CGGGAAGAGTCCACACGATG+TGG | - | chr5.2:68228685-68228704 | MS.gene57869:CDS | 60.0% | |
| GGAACCGAATCACGGGCCAT+AGG | + | chr5.2:68226478-68226497 | None:intergenic | 60.0% | |
| GGACGGAAGAGAGGACCACA+GGG | + | chr5.2:68228286-68228305 | None:intergenic | 60.0% | |
| GGGTTGGAAGGGTTTGGACC+CGG | - | chr5.2:68228583-68228602 | MS.gene57869:CDS | 60.0% | |
| TCACGGTAGGAATGGGGGAG+AGG | + | chr5.2:68228361-68228380 | None:intergenic | 60.0% | |
| ! | CCGCACTCTAATGGACCCTG+TGG | - | chr5.2:68228268-68228287 | MS.gene57869:intron | 60.0% |
| CCGGATGAGGTCGGAGAAGC+TGG | + | chr5.2:68228010-68228029 | None:intergenic | 65.0% | |
| GCTTCACCAATCGGCCGTCG+TGG | + | chr5.2:68228040-68228059 | None:intergenic | 65.0% | |
| AAGAACACCGGGGCCGCCTG+CGG | + | chr5.2:68228234-68228253 | None:intergenic | 70.0% | |
| CCACCTCTCCCTCCCTCCGC+AGG | - | chr5.2:68228215-68228234 | MS.gene57869:intron | 75.0% | |
| CCTCTCCCTCCCTCCGCAGG+CGG | - | chr5.2:68228218-68228237 | MS.gene57869:intron | 75.0% | |
| CCTGCGGAGGGAGGGAGAGG+TGG | + | chr5.2:68228218-68228237 | None:intergenic | 75.0% | |
| ! | AACACCGGGGCCGCCTGCGG+AGG | + | chr5.2:68228231-68228250 | None:intergenic | 80.0% |
| ! | ACACCGGGGCCGCCTGCGGA+GGG | + | chr5.2:68228230-68228249 | None:intergenic | 80.0% |
| ! | CCGCCTGCGGAGGGAGGGAG+AGG | + | chr5.2:68228221-68228240 | None:intergenic | 80.0% |
| ! | CCTCCCTCCGCAGGCGGCCC+CGG | - | chr5.2:68228224-68228243 | MS.gene57869:intron | 85.0% |
| ! | CGGGGCCGCCTGCGGAGGGA+GGG | + | chr5.2:68228226-68228245 | None:intergenic | 85.0% |
| ! | CCGGGGCCGCCTGCGGAGGG+AGG | + | chr5.2:68228227-68228246 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 68226356 | 68228877 | 68226356 | ID=MS.gene57869 |
| chr5.2 | mRNA | 68226356 | 68228877 | 68226356 | ID=MS.gene57869.t1;Parent=MS.gene57869 |
| chr5.2 | exon | 68228314 | 68228877 | 68228314 | ID=MS.gene57869.t1.exon1;Parent=MS.gene57869.t1 |
| chr5.2 | CDS | 68228314 | 68228877 | 68228314 | ID=cds.MS.gene57869.t1;Parent=MS.gene57869.t1 |
| chr5.2 | exon | 68226356 | 68227273 | 68226356 | ID=MS.gene57869.t1.exon2;Parent=MS.gene57869.t1 |
| chr5.2 | CDS | 68226356 | 68227273 | 68226356 | ID=cds.MS.gene57869.t1;Parent=MS.gene57869.t1 |
| Gene Sequence |
| Protein sequence |
