Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58009.t1 | XP_003609454.2 | 98.3 | 594 | 10 | 0 | 1 | 594 | 1 | 594 | 0.00E+00 | 1196.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58009.t1 | Q9LEW0 | 46.9 | 597 | 247 | 16 | 1 | 587 | 1 | 537 | 9.2e-139 | 495.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58009.t1 | G7JGJ1 | 98.3 | 594 | 10 | 0 | 1 | 594 | 1 | 594 | 0.0e+00 | 1196.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene057127 | MS.gene58009 | 0.809545 | 1.79E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58009.t1 | MTR_4g115880 | 98.316 | 594 | 10 | 0 | 1 | 594 | 1 | 594 | 0.0 | 1222 |
MS.gene58009.t1 | MTR_1g014260 | 48.997 | 598 | 212 | 14 | 10 | 589 | 11 | 533 | 0.0 | 535 |
MS.gene58009.t1 | MTR_4g130940 | 30.457 | 394 | 184 | 14 | 192 | 580 | 87 | 395 | 9.12e-39 | 152 |
MS.gene58009.t1 | MTR_4g130940 | 30.457 | 394 | 184 | 14 | 192 | 580 | 87 | 395 | 1.18e-38 | 152 |
MS.gene58009.t1 | MTR_6g022290 | 29.306 | 389 | 180 | 15 | 198 | 581 | 30 | 328 | 8.82e-38 | 147 |
MS.gene58009.t1 | MTR_6g022310 | 26.638 | 473 | 244 | 16 | 124 | 585 | 50 | 430 | 2.90e-37 | 147 |
MS.gene58009.t1 | MTR_5g030360 | 26.221 | 389 | 189 | 12 | 198 | 581 | 155 | 450 | 8.61e-34 | 137 |
MS.gene58009.t1 | MTR_3g100480 | 26.343 | 391 | 193 | 11 | 198 | 580 | 585 | 888 | 9.19e-34 | 138 |
MS.gene58009.t1 | MTR_6g022300 | 27.390 | 387 | 190 | 11 | 198 | 581 | 68 | 366 | 3.45e-32 | 132 |
MS.gene58009.t1 | MTR_8g090190 | 26.744 | 430 | 187 | 14 | 192 | 578 | 16 | 360 | 4.22e-32 | 127 |
MS.gene58009.t1 | MTR_3g087140 | 27.419 | 434 | 181 | 15 | 191 | 578 | 15 | 360 | 1.97e-31 | 125 |
MS.gene58009.t1 | MTR_5g066000 | 26.020 | 392 | 192 | 13 | 198 | 580 | 543 | 845 | 2.89e-31 | 130 |
MS.gene58009.t1 | MTR_3g100480 | 26.000 | 400 | 213 | 13 | 198 | 580 | 585 | 918 | 1.22e-30 | 128 |
MS.gene58009.t1 | MTR_8g067060 | 25.648 | 386 | 194 | 12 | 198 | 581 | 204 | 498 | 7.16e-30 | 124 |
MS.gene58009.t1 | MTR_8g471100 | 25.648 | 386 | 194 | 12 | 198 | 581 | 213 | 507 | 9.17e-30 | 124 |
MS.gene58009.t1 | MTR_5g032380 | 24.806 | 387 | 202 | 9 | 198 | 580 | 425 | 726 | 5.46e-29 | 123 |
MS.gene58009.t1 | MTR_5g430360 | 26.154 | 325 | 171 | 11 | 262 | 581 | 22 | 282 | 1.60e-28 | 120 |
MS.gene58009.t1 | MTR_2g071620 | 25.441 | 397 | 199 | 12 | 192 | 580 | 462 | 769 | 4.87e-28 | 120 |
MS.gene58009.t1 | MTR_2g070390 | 25.840 | 387 | 198 | 10 | 198 | 578 | 23 | 326 | 7.10e-28 | 119 |
MS.gene58009.t1 | MTR_1g014680 | 25.879 | 398 | 197 | 14 | 190 | 578 | 176 | 484 | 7.22e-26 | 113 |
MS.gene58009.t1 | MTR_8g064910 | 25.758 | 396 | 187 | 16 | 198 | 581 | 55 | 355 | 3.30e-20 | 94.0 |
MS.gene58009.t1 | MTR_7g088760 | 28.144 | 167 | 95 | 4 | 415 | 578 | 771 | 915 | 6.82e-19 | 91.7 |
MS.gene58009.t1 | MTR_7g088760 | 28.144 | 167 | 95 | 4 | 415 | 578 | 754 | 898 | 7.17e-19 | 91.3 |
MS.gene58009.t1 | MTR_1g077980 | 31.737 | 167 | 88 | 5 | 415 | 578 | 765 | 908 | 2.22e-18 | 89.7 |
MS.gene58009.t1 | MTR_1g077980 | 30.622 | 209 | 96 | 5 | 195 | 382 | 318 | 498 | 1.76e-17 | 87.0 |
MS.gene58009.t1 | MTR_1g041240 | 23.747 | 379 | 189 | 12 | 195 | 566 | 198 | 483 | 2.93e-18 | 89.7 |
MS.gene58009.t1 | MTR_1g041240 | 23.747 | 379 | 189 | 12 | 195 | 566 | 199 | 484 | 2.95e-18 | 89.7 |
MS.gene58009.t1 | MTR_1g041240 | 23.747 | 379 | 189 | 12 | 195 | 566 | 197 | 482 | 3.25e-18 | 89.4 |
MS.gene58009.t1 | MTR_7g106570 | 29.665 | 209 | 98 | 4 | 195 | 382 | 285 | 465 | 8.00e-17 | 84.7 |
MS.gene58009.t1 | MTR_7g106570 | 26.667 | 180 | 108 | 5 | 415 | 592 | 742 | 899 | 3.48e-14 | 76.3 |
MS.gene58009.t1 | MTR_0279s0020 | 21.964 | 387 | 200 | 12 | 198 | 581 | 6 | 293 | 1.61e-16 | 81.6 |
MS.gene58009.t1 | MTR_5g086700 | 23.077 | 377 | 190 | 12 | 195 | 564 | 202 | 485 | 1.93e-16 | 84.0 |
MS.gene58009.t1 | MTR_5g086700 | 23.077 | 377 | 190 | 12 | 195 | 564 | 202 | 485 | 2.10e-16 | 83.6 |
MS.gene58009.t1 | MTR_2g087710 | 26.506 | 166 | 97 | 4 | 415 | 578 | 717 | 859 | 9.29e-16 | 81.6 |
MS.gene58009.t1 | MTR_2g087710 | 27.826 | 230 | 115 | 6 | 195 | 403 | 269 | 468 | 1.72e-14 | 77.4 |
MS.gene58009.t1 | MTR_3g079840 | 23.280 | 378 | 188 | 13 | 195 | 564 | 198 | 481 | 1.21e-15 | 81.3 |
MS.gene58009.t1 | MTR_3g079840 | 23.280 | 378 | 188 | 13 | 195 | 564 | 197 | 480 | 1.34e-15 | 81.3 |
MS.gene58009.t1 | MTR_0279s0020 | 21.671 | 383 | 198 | 12 | 202 | 581 | 1 | 284 | 7.19e-15 | 75.9 |
MS.gene58009.t1 | MTR_4g111860 | 23.274 | 391 | 206 | 14 | 198 | 581 | 88 | 391 | 1.37e-14 | 76.6 |
MS.gene58009.t1 | MTR_3g083600 | 25.926 | 162 | 86 | 3 | 431 | 578 | 926 | 1067 | 1.60e-12 | 71.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58009.t1 | AT5G10790 | 46.980 | 596 | 248 | 14 | 1 | 587 | 1 | 537 | 1.07e-166 | 486 |
MS.gene58009.t1 | AT5G10790 | 54.637 | 399 | 145 | 5 | 192 | 587 | 43 | 408 | 1.83e-138 | 409 |
MS.gene58009.t1 | AT5G57990 | 29.009 | 424 | 195 | 15 | 168 | 580 | 81 | 409 | 6.50e-39 | 153 |
MS.gene58009.t1 | AT4G17895 | 26.972 | 393 | 185 | 12 | 198 | 581 | 177 | 476 | 1.51e-33 | 136 |
MS.gene58009.t1 | AT4G24560 | 26.478 | 389 | 195 | 9 | 198 | 580 | 543 | 846 | 2.52e-33 | 136 |
MS.gene58009.t1 | AT3G14400 | 27.506 | 389 | 193 | 10 | 198 | 578 | 25 | 332 | 5.77e-32 | 131 |
MS.gene58009.t1 | AT4G39910 | 25.866 | 433 | 191 | 13 | 192 | 578 | 16 | 364 | 1.79e-31 | 126 |
MS.gene58009.t1 | AT2G22310 | 26.634 | 413 | 186 | 13 | 192 | 573 | 16 | 342 | 1.84e-31 | 126 |
MS.gene58009.t1 | AT5G65450 | 26.873 | 387 | 195 | 11 | 198 | 580 | 349 | 651 | 8.78e-29 | 122 |
MS.gene58009.t1 | AT5G65450 | 26.873 | 387 | 195 | 11 | 198 | 580 | 330 | 632 | 1.10e-28 | 122 |
MS.gene58009.t1 | AT2G24640 | 26.582 | 395 | 184 | 15 | 198 | 578 | 5 | 307 | 1.15e-27 | 117 |
MS.gene58009.t1 | AT5G46740 | 27.750 | 400 | 190 | 15 | 193 | 581 | 158 | 469 | 2.26e-27 | 117 |
MS.gene58009.t1 | AT4G31670 | 24.422 | 389 | 200 | 12 | 198 | 578 | 169 | 471 | 2.83e-27 | 117 |
MS.gene58009.t1 | AT2G24640 | 26.582 | 395 | 184 | 15 | 198 | 578 | 175 | 477 | 3.11e-27 | 117 |
MS.gene58009.t1 | AT1G17110 | 24.490 | 392 | 202 | 12 | 197 | 580 | 442 | 747 | 1.30e-25 | 112 |
MS.gene58009.t1 | AT1G17110 | 24.490 | 392 | 202 | 12 | 197 | 580 | 438 | 743 | 1.31e-25 | 112 |
MS.gene58009.t1 | AT1G17110 | 24.490 | 392 | 202 | 12 | 197 | 580 | 438 | 743 | 1.31e-25 | 112 |
MS.gene58009.t1 | AT5G46740 | 29.710 | 276 | 132 | 9 | 313 | 581 | 40 | 260 | 7.70e-25 | 108 |
MS.gene58009.t1 | AT2G22310 | 26.087 | 345 | 167 | 10 | 258 | 573 | 25 | 310 | 4.72e-24 | 103 |
MS.gene58009.t1 | AT2G22310 | 26.087 | 345 | 167 | 10 | 258 | 573 | 20 | 305 | 4.73e-24 | 103 |
MS.gene58009.t1 | AT2G40930 | 27.358 | 212 | 127 | 6 | 375 | 581 | 727 | 916 | 1.26e-20 | 97.1 |
MS.gene58009.t1 | AT2G40930 | 26.837 | 313 | 156 | 9 | 195 | 476 | 315 | 585 | 8.66e-17 | 84.7 |
MS.gene58009.t1 | AT2G40930 | 27.358 | 212 | 127 | 6 | 375 | 581 | 727 | 916 | 1.26e-20 | 97.1 |
MS.gene58009.t1 | AT2G40930 | 26.837 | 313 | 156 | 9 | 195 | 476 | 315 | 585 | 8.66e-17 | 84.7 |
MS.gene58009.t1 | AT4G10590 | 32.934 | 167 | 86 | 4 | 415 | 578 | 748 | 891 | 1.69e-19 | 93.6 |
MS.gene58009.t1 | AT4G10590 | 31.100 | 209 | 95 | 6 | 195 | 382 | 301 | 481 | 2.35e-17 | 86.7 |
MS.gene58009.t1 | AT4G10590 | 32.934 | 167 | 86 | 4 | 415 | 578 | 748 | 891 | 1.69e-19 | 93.6 |
MS.gene58009.t1 | AT4G10590 | 31.100 | 209 | 95 | 6 | 195 | 382 | 301 | 481 | 2.35e-17 | 86.7 |
MS.gene58009.t1 | AT4G10590 | 32.934 | 167 | 86 | 4 | 415 | 578 | 748 | 891 | 1.69e-19 | 93.6 |
MS.gene58009.t1 | AT4G10590 | 31.100 | 209 | 95 | 6 | 195 | 382 | 301 | 481 | 2.35e-17 | 86.7 |
MS.gene58009.t1 | AT4G10590 | 32.934 | 167 | 86 | 4 | 415 | 578 | 748 | 891 | 1.69e-19 | 93.6 |
MS.gene58009.t1 | AT4G10590 | 31.100 | 209 | 95 | 6 | 195 | 382 | 301 | 481 | 2.35e-17 | 86.7 |
MS.gene58009.t1 | AT4G10570 | 32.934 | 167 | 86 | 4 | 415 | 578 | 749 | 892 | 5.20e-19 | 92.0 |
MS.gene58009.t1 | AT4G10570 | 30.622 | 209 | 96 | 5 | 195 | 382 | 302 | 482 | 6.50e-17 | 85.1 |
MS.gene58009.t1 | AT1G32850 | 30.476 | 210 | 97 | 4 | 194 | 382 | 298 | 479 | 6.27e-19 | 91.7 |
MS.gene58009.t1 | AT1G32850 | 30.508 | 177 | 96 | 5 | 405 | 578 | 725 | 877 | 1.25e-15 | 81.3 |
MS.gene58009.t1 | AT5G22030 | 27.711 | 166 | 96 | 4 | 415 | 578 | 723 | 866 | 9.68e-18 | 87.8 |
MS.gene58009.t1 | AT5G22030 | 27.711 | 166 | 96 | 4 | 415 | 578 | 765 | 908 | 1.13e-17 | 87.8 |
MS.gene58009.t1 | AT5G06600 | 22.539 | 386 | 195 | 14 | 195 | 572 | 196 | 485 | 5.98e-15 | 79.0 |
MS.gene58009.t1 | AT5G06600 | 22.539 | 386 | 195 | 14 | 195 | 572 | 197 | 486 | 6.04e-15 | 79.0 |
MS.gene58009.t1 | AT5G06600 | 22.539 | 386 | 195 | 14 | 195 | 572 | 197 | 486 | 7.55e-15 | 78.6 |
MS.gene58009.t1 | AT3G11910 | 22.251 | 382 | 201 | 14 | 195 | 572 | 195 | 484 | 8.98e-15 | 78.6 |
MS.gene58009.t1 | AT3G11910 | 22.251 | 382 | 201 | 14 | 195 | 572 | 195 | 484 | 8.98e-15 | 78.6 |
MS.gene58009.t1 | AT3G11910 | 22.251 | 382 | 201 | 14 | 195 | 572 | 196 | 485 | 9.29e-15 | 78.6 |
MS.gene58009.t1 | AT3G11910 | 22.251 | 382 | 201 | 14 | 195 | 572 | 196 | 485 | 9.29e-15 | 78.6 |
MS.gene58009.t1 | AT1G04860 | 28.571 | 147 | 75 | 4 | 442 | 578 | 828 | 954 | 5.63e-11 | 66.2 |
Find 161 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAATCTGACCGTTGATTT+TGG | 0.232505 | 8.3:+10495812 | None:intergenic |
TGATTTCCCGCGGGGATTGC+GGG | 0.236194 | 8.3:-10495250 | MS.gene58009:CDS |
GCGGAGGGAGGCGCGGCCGC+CGG | 0.262389 | 8.3:+10495701 | None:intergenic |
ATTTACAAGAGCAGAGAAAT+TGG | 0.276376 | 8.3:-10492351 | MS.gene58009:CDS |
CGGAGGGAGGCGCGGCCGCC+GGG | 0.289815 | 8.3:+10495702 | None:intergenic |
TTTCATGAATTCGGTGTTGC+AGG | 0.290893 | 8.3:-10495202 | MS.gene58009:CDS |
CGCAATCCCCGCGGGAAATC+AGG | 0.307100 | 8.3:+10495252 | None:intergenic |
CAAGAACTTTGCTGGGCTAT+AGG | 0.310468 | 8.3:+10494954 | None:intergenic |
AAACACTTGTTTCATGAATT+CGG | 0.335765 | 8.3:-10495211 | MS.gene58009:CDS |
GCGATTGTTGTATTGCTCAT+AGG | 0.342061 | 8.3:-10492589 | MS.gene58009:CDS |
CTTTGGGATATCTACCTTGA+TGG | 0.355939 | 8.3:-10492387 | MS.gene58009:CDS |
CTGCTGCGTTTGCCGTGATC+AGG | 0.363132 | 8.3:-10495484 | MS.gene58009:CDS |
CTATAAAGCAACTGATAAAT+CGG | 0.367733 | 8.3:-10491865 | MS.gene58009:CDS |
ATTATGCTTAGCTTGTGATA+TGG | 0.369132 | 8.3:-10495016 | MS.gene58009:CDS |
CACCTGTACAAGAACTTTGC+TGG | 0.372135 | 8.3:+10494946 | None:intergenic |
ATCTCTCATCCTCAATCTTA+AGG | 0.377114 | 8.3:-10492139 | MS.gene58009:CDS |
AACAAGGGGAAGCTTCCTTA+TGG | 0.382446 | 8.3:+10492265 | None:intergenic |
TTTACAAGAGCAGAGAAATT+GGG | 0.384632 | 8.3:-10492350 | MS.gene58009:CDS |
GGTACAAGTGTGATGATTCT+TGG | 0.387459 | 8.3:-10491962 | MS.gene58009:CDS |
GTTTGATCCGGAGGCAGTTA+TGG | 0.388383 | 8.3:+10495727 | None:intergenic |
AGGTAGATATCCCAAAGTTT+TGG | 0.392594 | 8.3:+10492393 | None:intergenic |
ATAGCTTGCAAGGTTGGACT+TGG | 0.397326 | 8.3:+10494660 | None:intergenic |
CCGATTCCAGCCAAAACTTT+GGG | 0.398387 | 8.3:-10492403 | MS.gene58009:CDS |
AAACATTGTGAGGGCTGCTC+AGG | 0.399967 | 8.3:-10491922 | MS.gene58009:CDS |
ATCTACCTTGATGGGGTGCT+TGG | 0.401605 | 8.3:-10492378 | MS.gene58009:CDS |
CTGATTTCCCGCGGGGATTG+CGG | 0.404798 | 8.3:-10495251 | MS.gene58009:CDS |
GCCGATTCCAGCCAAAACTT+TGG | 0.412364 | 8.3:-10492404 | MS.gene58009:CDS |
AAGAACTTTGCTGGGCTATA+GGG | 0.417867 | 8.3:+10494955 | None:intergenic |
CATAGATCATTTGAAGCATC+AGG | 0.419831 | 8.3:+10492074 | None:intergenic |
GCGGTCAGATGTTATGTGTA+TGG | 0.427526 | 8.3:-10492549 | MS.gene58009:CDS |
TCCTGAGTGATAAGCATAAT+CGG | 0.439582 | 8.3:-10495146 | MS.gene58009:CDS |
ATAGCAACTGCGAAAAGAAA+TGG | 0.452606 | 8.3:-10495066 | MS.gene58009:CDS |
CCTTGCAAGCTATGAACAAC+AGG | 0.455682 | 8.3:-10494650 | MS.gene58009:CDS |
CTCTCAAGCAGATGTCCATA+AGG | 0.460815 | 8.3:-10492280 | MS.gene58009:CDS |
TTGTTCATAGCTTGCAAGGT+TGG | 0.469502 | 8.3:+10494654 | None:intergenic |
ATGGAGGGAGAGGAATGGTT+TGG | 0.473439 | 8.3:+10495746 | None:intergenic |
GATTTCCCGCGGGGATTGCG+GGG | 0.474172 | 8.3:-10495249 | MS.gene58009:CDS |
GGCCGCCGGGAGGTTTGATC+CGG | 0.477725 | 8.3:+10495715 | None:intergenic |
TATGTCATCTACTCCGCATC+CGG | 0.477988 | 8.3:-10495373 | MS.gene58009:CDS |
CGATTGTTGTATTGCTCATA+GGG | 0.478514 | 8.3:-10492588 | MS.gene58009:CDS |
GGTGACATGTCCAGTGAGAA+TGG | 0.480165 | 8.3:+10492164 | None:intergenic |
CAGACCGTTGCGTCCACAAT+CGG | 0.485001 | 8.3:-10495423 | MS.gene58009:CDS |
TTTGGGATATCTACCTTGAT+GGG | 0.487341 | 8.3:-10492386 | MS.gene58009:CDS |
CTTGACTTGGAACCAAATCA+AGG | 0.491810 | 8.3:-10492479 | MS.gene58009:CDS |
TACAGCGGCGCATGAGATGC+AGG | 0.492370 | 8.3:+10495614 | None:intergenic |
CGTAGACATCTCACTTGACT+TGG | 0.493660 | 8.3:-10492492 | MS.gene58009:CDS |
TCAATCTTAAGGAGTCGGTT+TGG | 0.493910 | 8.3:-10492128 | MS.gene58009:CDS |
GATCACGGCGGAGGGAGGCG+CGG | 0.494606 | 8.3:+10495694 | None:intergenic |
TTTGCAGTTCCCATTCTCAC+TGG | 0.494834 | 8.3:-10492174 | MS.gene58009:CDS |
GGCAGAATCATCACCATTTG+CGG | 0.495711 | 8.3:+10495089 | None:intergenic |
GCTAAGTGGGGACATGGTTG+TGG | 0.496744 | 8.3:+10495789 | None:intergenic |
GCGGCGGAACTCGGCTAAGT+GGG | 0.503971 | 8.3:+10495776 | None:intergenic |
AGAGCGCGTTCGCGTAGATC+CGG | 0.505738 | 8.3:+10495306 | None:intergenic |
CTCACCATTGCAAGAAGGAT+TGG | 0.509379 | 8.3:+10492427 | None:intergenic |
GAGGGAGAGGAATGGTTTGG+TGG | 0.509621 | 8.3:+10495749 | None:intergenic |
CGACGCTTTCTGAGATTCTC+CGG | 0.509875 | 8.3:+10495354 | None:intergenic |
TTTCGTGAGGATCACGGCGG+AGG | 0.510267 | 8.3:+10495685 | None:intergenic |
CACTCTGGTAAGTTAGATGC+TGG | 0.512954 | 8.3:-10492020 | MS.gene58009:CDS |
TCAGGCTCATCCCCATCAAA+AGG | 0.513022 | 8.3:+10492092 | None:intergenic |
CCTGTTGTTCATAGCTTGCA+AGG | 0.514285 | 8.3:+10494650 | None:intergenic |
GTACAAGTGTGATGATTCTT+GGG | 0.516165 | 8.3:-10491961 | MS.gene58009:CDS |
ATTGCTCATAGGGTATTCTC+TGG | 0.521986 | 8.3:-10492578 | MS.gene58009:CDS |
CAGTTATGGAGGGAGAGGAA+TGG | 0.523524 | 8.3:+10495741 | None:intergenic |
TCTCCCTCCATAACTGCCTC+CGG | 0.524014 | 8.3:-10495734 | MS.gene58009:CDS |
TTTCTGAGATTCTCCGGATG+CGG | 0.524348 | 8.3:+10495360 | None:intergenic |
AGCGGCGGAACTCGGCTAAG+TGG | 0.526358 | 8.3:+10495775 | None:intergenic |
GCCCAGCAAAGTTCTTGTAC+AGG | 0.529287 | 8.3:-10494948 | MS.gene58009:intron |
CGCCGGGAGGTTTGATCCGG+AGG | 0.530528 | 8.3:+10495718 | None:intergenic |
GTGACATGTCCAGTGAGAAT+GGG | 0.531399 | 8.3:+10492165 | None:intergenic |
TCAGCAGTGTAAGGTGAAGC+AGG | 0.532735 | 8.3:-10492306 | MS.gene58009:CDS |
TCGCGTAGATCCGGAGTTGA+AGG | 0.536635 | 8.3:+10495315 | None:intergenic |
AGGGAGGCGCGGCCGCCGGG+AGG | 0.538738 | 8.3:+10495705 | None:intergenic |
GGTGGAAGAGCGGCGGAACT+CGG | 0.539548 | 8.3:+10495767 | None:intergenic |
TTTGCTGTCGTCACTCACTC+TGG | 0.539742 | 8.3:-10492035 | MS.gene58009:CDS |
CATCCTCAATCTTAAGGAGT+CGG | 0.541711 | 8.3:-10492133 | MS.gene58009:CDS |
GCTTCCAATCCTTCTTGCAA+TGG | 0.542195 | 8.3:-10492431 | MS.gene58009:CDS |
CAACGTTCCTGATTTCCCGC+GGG | 0.545113 | 8.3:-10495259 | MS.gene58009:CDS |
CTACGCGAACGCGCTCTGAT+CGG | 0.545145 | 8.3:-10495300 | MS.gene58009:CDS |
CGACGTAAGCCACACAATGA+AGG | 0.547420 | 8.3:-10494568 | MS.gene58009:intron |
ACCTGTACAAGAACTTTGCT+GGG | 0.547919 | 8.3:+10494947 | None:intergenic |
CGCATGAGATGCAGGCATAG+AGG | 0.550847 | 8.3:+10495622 | None:intergenic |
TCATGTCACTCTTCCACCGC+CGG | 0.554123 | 8.3:-10495591 | MS.gene58009:CDS |
GGGAAATCAGGAACGTTGAT+CGG | 0.554225 | 8.3:+10495264 | None:intergenic |
AATACATTACCTTCATTGTG+TGG | 0.554718 | 8.3:+10494559 | None:intergenic |
GGAAGGAGCAGAGAGACCGC+AGG | 0.555638 | 8.3:+10495647 | None:intergenic |
GGATTACCGTCCTTCAACTC+CGG | 0.556868 | 8.3:-10495325 | MS.gene58009:CDS |
AAACCGACTCCTTAAGATTG+AGG | 0.558602 | 8.3:+10492130 | None:intergenic |
AATGCTGATGATGCCGCAAA+TGG | 0.559230 | 8.3:-10495102 | MS.gene58009:CDS |
CAATCCTTCTTGCAATGGTG+AGG | 0.559381 | 8.3:-10492426 | MS.gene58009:CDS |
AGAATGGGAACTGCAAATAA+CGG | 0.566367 | 8.3:+10492180 | None:intergenic |
ATGAGATGCAGGCATAGAGG+CGG | 0.566788 | 8.3:+10495625 | None:intergenic |
GTGAGGATCACGGCGGAGGG+AGG | 0.567687 | 8.3:+10495689 | None:intergenic |
CATTGATGCGGCATGTGCGG+CGG | 0.567934 | 8.3:+10495554 | None:intergenic |
GGATGCGGAGTAGATGACAT+AGG | 0.568578 | 8.3:+10495375 | None:intergenic |
ATTTCCCGCGGGGATTGCGG+GGG | 0.570254 | 8.3:-10495248 | MS.gene58009:CDS |
TGAGATGCAGGCATAGAGGC+GGG | 0.572369 | 8.3:+10495626 | None:intergenic |
ACCGATTATGCTTATCACTC+AGG | 0.573589 | 8.3:+10495145 | None:intergenic |
ATCTGCGATTAAGCAATCAA+TGG | 0.573921 | 8.3:-10491983 | MS.gene58009:CDS |
TTATATGGAAGCAAGAAACA+AGG | 0.575945 | 8.3:+10492249 | None:intergenic |
GGAGGCAGTTATGGAGGGAG+AGG | 0.576687 | 8.3:+10495736 | None:intergenic |
TGATCCGGAGGCAGTTATGG+AGG | 0.576751 | 8.3:+10495730 | None:intergenic |
TTCGTGAGGATCACGGCGGA+GGG | 0.577779 | 8.3:+10495686 | None:intergenic |
GTGAGAAATGACACCGGCGG+TGG | 0.578310 | 8.3:+10495578 | None:intergenic |
AAGATTGAGGATGAGAGATA+AGG | 0.583138 | 8.3:+10492143 | None:intergenic |
TTACAAGAGCAGAGAAATTG+GGG | 0.584043 | 8.3:-10492349 | MS.gene58009:CDS |
AACTCGGCTAAGTGGGGACA+TGG | 0.584956 | 8.3:+10495783 | None:intergenic |
TCAAGTGAGATGTCTACGCA+TGG | 0.585086 | 8.3:+10492497 | None:intergenic |
AGACATTGATGCGGCATGTG+CGG | 0.585359 | 8.3:+10495551 | None:intergenic |
TCAACGTTCCTGATTTCCCG+CGG | 0.585556 | 8.3:-10495260 | MS.gene58009:CDS |
TCTATCCAAGCACCCCATCA+AGG | 0.586315 | 8.3:+10492373 | None:intergenic |
GATGCGGAGTAGATGACATA+GGG | 0.587068 | 8.3:+10495376 | None:intergenic |
GCAAACGCAGCAGAAAAGCT+CGG | 0.588350 | 8.3:+10495494 | None:intergenic |
TCTCAGAAAGCGTCGCCGAG+TGG | 0.593703 | 8.3:-10495346 | MS.gene58009:CDS |
CATGCCGCATCAATGTCTCC+TGG | 0.594546 | 8.3:-10495546 | MS.gene58009:CDS |
AACATTGTGAGGGCTGCTCA+GGG | 0.594864 | 8.3:-10491921 | MS.gene58009:CDS |
GATCCGGAGGCAGTTATGGA+GGG | 0.595001 | 8.3:+10495731 | None:intergenic |
TATATGGAAGCAAGAAACAA+GGG | 0.595854 | 8.3:+10492250 | None:intergenic |
TTGACTTGGAACCAAATCAA+GGG | 0.596094 | 8.3:-10492478 | MS.gene58009:CDS |
TCGATTGCGATCTGATGACC+AGG | 0.596802 | 8.3:+10495528 | None:intergenic |
GCTTGATGGGATCCATGAAA+AGG | 0.596972 | 8.3:-10494602 | MS.gene58009:CDS |
ATGCAGGCATAGAGGCGGGA+AGG | 0.603348 | 8.3:+10495630 | None:intergenic |
AAAAGAAATGGAGAGAACAA+TGG | 0.604176 | 8.3:-10495054 | MS.gene58009:CDS |
TGTTTCACACGCCACCGTTG+AGG | 0.604532 | 8.3:-10495176 | MS.gene58009:CDS |
GAGGAATTTCGTGAGGATCA+CGG | 0.607762 | 8.3:+10495679 | None:intergenic |
GTCGCCGATTGTGGACGCAA+CGG | 0.612082 | 8.3:+10495419 | None:intergenic |
GTTGCGTCCACAATCGGCGA+CGG | 0.621132 | 8.3:-10495417 | MS.gene58009:CDS |
TGACTTGGAACCAAATCAAG+GGG | 0.622070 | 8.3:-10492477 | MS.gene58009:CDS |
AGTTGTTGATGTGAAACCAC+AGG | 0.622253 | 8.3:+10492526 | None:intergenic |
TTGCTGGGCTATAGGGAAGA+CGG | 0.622634 | 8.3:+10494962 | None:intergenic |
TGCCTCCGGATCAAACCTCC+CGG | 0.622961 | 8.3:-10495720 | MS.gene58009:CDS |
ATTCCTCACTGCAACGCCTG+CGG | 0.624299 | 8.3:-10495663 | MS.gene58009:CDS |
GATCCATGAAAAGGTGGACA+AGG | 0.624629 | 8.3:-10494593 | MS.gene58009:CDS |
TCGGCCTCACCATTGCAAGA+AGG | 0.626312 | 8.3:+10492422 | None:intergenic |
AAGTTGATGAAAACATTGTG+AGG | 0.627661 | 8.3:-10491932 | MS.gene58009:CDS |
CATCACATGTGCCAATCATG+AGG | 0.628162 | 8.3:+10491839 | None:intergenic |
GATGTTATGTGTATGGCCTG+TGG | 0.629984 | 8.3:-10492542 | MS.gene58009:CDS |
CACGATCGTAAACCTGATCA+CGG | 0.630349 | 8.3:+10495472 | None:intergenic |
AGACCGCAGGCGTTGCAGTG+AGG | 0.634031 | 8.3:+10495660 | None:intergenic |
TTGGGATATCTACCTTGATG+GGG | 0.634651 | 8.3:-10492385 | MS.gene58009:CDS |
CTCAGGAAGTAATTCCTCAA+CGG | 0.634756 | 8.3:+10495162 | None:intergenic |
GGAATGGTTTGGTGGAAGAG+CGG | 0.636084 | 8.3:+10495757 | None:intergenic |
GTCATGTCCTCCAAAATCAA+CGG | 0.636395 | 8.3:-10495822 | MS.gene58009:CDS |
CAAGTGAGATGTCTACGCAT+GGG | 0.638098 | 8.3:+10492498 | None:intergenic |
ATATGGAAGCAAGAAACAAG+GGG | 0.638379 | 8.3:+10492251 | None:intergenic |
TTGAAGGACGGTAATCCACT+CGG | 0.644376 | 8.3:+10495331 | None:intergenic |
CGGCGGAACTCGGCTAAGTG+GGG | 0.646958 | 8.3:+10495777 | None:intergenic |
AACGTTCCTGATTTCCCGCG+GGG | 0.652139 | 8.3:-10495258 | MS.gene58009:CDS |
TGATGGGATCCATGAAAAGG+TGG | 0.653101 | 8.3:-10494599 | MS.gene58009:CDS |
TTGCAGTGAGGAATTTCGTG+AGG | 0.654104 | 8.3:+10495672 | None:intergenic |
ATGGTTTGGTGGAAGAGCGG+CGG | 0.661966 | 8.3:+10495760 | None:intergenic |
GTAGATCCGGAGTTGAAGGA+CGG | 0.681063 | 8.3:+10495319 | None:intergenic |
GGTCTGTGCGATCACGACTG+CGG | 0.684411 | 8.3:+10495440 | None:intergenic |
AGTTGATGAAAACATTGTGA+GGG | 0.699031 | 8.3:-10491931 | MS.gene58009:CDS |
AGGAAGTAATTCCTCAACGG+TGG | 0.706756 | 8.3:+10495165 | None:intergenic |
ATGACCAGGAGACATTGATG+CGG | 0.728953 | 8.3:+10495542 | None:intergenic |
GGCGGCGTGAGAAATGACAC+CGG | 0.740854 | 8.3:+10495572 | None:intergenic |
GACTTGGAACCAAATCAAGG+GGG | 0.743974 | 8.3:-10492476 | MS.gene58009:CDS |
GGAAGAGTGACATGATACAG+CGG | 0.752026 | 8.3:+10495599 | None:intergenic |
CTCCGGATCAAACCTCCCGG+CGG | 0.757304 | 8.3:-10495717 | MS.gene58009:CDS |
GGCGTGAGAAATGACACCGG+CGG | 0.784348 | 8.3:+10495575 | None:intergenic |
GAATTTCGTGAGGATCACGG+CGG | 0.842560 | 8.3:+10495682 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACTAAAAAAATAAAACAAA+AGG | + | chr8.3:10494907-10494926 | None:intergenic | 10.0% |
!! | ACTAAAAAAATAAAACAAAA+GGG | + | chr8.3:10494906-10494925 | None:intergenic | 10.0% |
!! | AAATACAAAAAATCAAAACA+GGG | + | chr8.3:10493208-10493227 | None:intergenic | 15.0% |
!!! | TATTTTTGATCAAATCTTTT+AGG | - | chr8.3:10493455-10493474 | MS.gene58009:intron | 15.0% |
!! | CAAATACAAAAAATCAAAAC+AGG | + | chr8.3:10493209-10493228 | None:intergenic | 20.0% |
!! | GATATATTTCAGTATCTTTA+AGG | + | chr8.3:10493612-10493631 | None:intergenic | 20.0% |
!! | TAATCTAGTATACAATCTAA+AGG | + | chr8.3:10493899-10493918 | None:intergenic | 20.0% |
!! | TATTTGTTTCAAAATGAAGT+TGG | - | chr8.3:10494776-10494795 | MS.gene58009:intron | 20.0% |
!! | TCATCTTAAATAATGGTAAA+TGG | - | chr8.3:10493672-10493691 | MS.gene58009:intron | 20.0% |
!! | TTATGTTCTTGAAAATCTAA+TGG | + | chr8.3:10493874-10493893 | None:intergenic | 20.0% |
!!! | AGTTTTTAGAATTTATTCAC+TGG | - | chr8.3:10492877-10492896 | MS.gene58009:intron | 20.0% |
!!! | CAACAAAATACTATTTTTCT+AGG | - | chr8.3:10493370-10493389 | MS.gene58009:intron | 20.0% |
!!! | CTGTTTTGATTTTTTGTATT+TGG | - | chr8.3:10493207-10493226 | MS.gene58009:intron | 20.0% |
!!! | GTTTTTAGAATTTATTCACT+GGG | - | chr8.3:10492878-10492897 | MS.gene58009:intron | 20.0% |
! | AAAATTTCAACATACTTCAC+AGG | + | chr8.3:10493302-10493321 | None:intergenic | 25.0% |
! | AAACACTTGTTTCATGAATT+CGG | - | chr8.3:10492462-10492481 | MS.gene58009:CDS | 25.0% |
! | AAACAGTGACACAAATTTAT+TGG | - | chr8.3:10493140-10493159 | MS.gene58009:intron | 25.0% |
! | AAACCTCAATTTAATACAAC+AGG | - | chr8.3:10494878-10494897 | MS.gene58009:intron | 25.0% |
! | AAATTTCAACATACTTCACA+GGG | + | chr8.3:10493301-10493320 | None:intergenic | 25.0% |
! | AAGAAAAAAAATGTCAAGGA+AGG | - | chr8.3:10495466-10495485 | MS.gene58009:CDS | 25.0% |
! | AAGGTATGTATGTTTGTATA+GGG | + | chr8.3:10493593-10493612 | None:intergenic | 25.0% |
! | CTATAAAGCAACTGATAAAT+CGG | - | chr8.3:10495808-10495827 | MS.gene58009:CDS | 25.0% |
! | CTTCAAGAAAAAAAATGTCA+AGG | - | chr8.3:10495462-10495481 | MS.gene58009:CDS | 25.0% |
! | TAAGGTATGTATGTTTGTAT+AGG | + | chr8.3:10493594-10493613 | None:intergenic | 25.0% |
! | TAGACATCAAGTCAATTTAT+CGG | - | chr8.3:10494745-10494764 | MS.gene58009:intron | 25.0% |
! | TATCATAACATTGAAATGCA+GGG | - | chr8.3:10494083-10494102 | MS.gene58009:intron | 25.0% |
! | TATCTAAACATGGAAAAAAG+AGG | + | chr8.3:10494308-10494327 | None:intergenic | 25.0% |
! | TCCTATATGATGAATTGAAT+AGG | + | chr8.3:10494251-10494270 | None:intergenic | 25.0% |
! | TTATCATAACATTGAAATGC+AGG | - | chr8.3:10494082-10494101 | MS.gene58009:intron | 25.0% |
! | TTATTCACTGGGTTTATATT+TGG | - | chr8.3:10492889-10492908 | MS.gene58009:intron | 25.0% |
! | TTCCTAACTATAAAACCATA+CGG | + | chr8.3:10493792-10493811 | None:intergenic | 25.0% |
! | TTTACAATGGTTGCAAAATT+AGG | - | chr8.3:10494832-10494851 | MS.gene58009:intron | 25.0% |
!! | AAAACTTTTGGCATTTTATG+TGG | + | chr8.3:10494488-10494507 | None:intergenic | 25.0% |
!! | AAACTTTTGGCATTTTATGT+GGG | + | chr8.3:10494487-10494506 | None:intergenic | 25.0% |
!! | AACAGAATATTTCCTTTTGA+TGG | - | chr8.3:10495569-10495588 | MS.gene58009:CDS | 25.0% |
!! | AATTTTTGCCTATGAAACAA+GGG | + | chr8.3:10493767-10493786 | None:intergenic | 25.0% |
!! | ACAGAATATTTCCTTTTGAT+GGG | - | chr8.3:10495570-10495589 | MS.gene58009:CDS | 25.0% |
!! | AGTGCTCAAATCTTTTTATA+TGG | + | chr8.3:10495442-10495461 | None:intergenic | 25.0% |
!! | GTGTCATTCATCTTAAATAA+TGG | - | chr8.3:10493665-10493684 | MS.gene58009:intron | 25.0% |
!! | TAATTTTTGCCTATGAAACA+AGG | + | chr8.3:10493768-10493787 | None:intergenic | 25.0% |
!! | TTTGAAACTTAAAGAGTAAG+AGG | - | chr8.3:10493816-10493835 | MS.gene58009:intron | 25.0% |
!! | TTTTCATTTCAATGCTTGAT+GGG | - | chr8.3:10493058-10493077 | MS.gene58009:intron | 25.0% |
!! | TTTTTCATTTCAATGCTTGA+TGG | - | chr8.3:10493057-10493076 | MS.gene58009:intron | 25.0% |
!!! | AAGAGTATTCTGAATCATTT+TGG | + | chr8.3:10494049-10494068 | None:intergenic | 25.0% |
!!! | AGTTATTTGAGTTGTTGTTA+TGG | - | chr8.3:10492965-10492984 | MS.gene58009:intron | 25.0% |
!!! | GTGTCATTTATCTTCAATAA+TGG | + | chr8.3:10493557-10493576 | None:intergenic | 25.0% |
AAAAAAAATGTCAAGGAAGG+TGG | - | chr8.3:10495469-10495488 | MS.gene58009:CDS | 30.0% | |
AAAACAGGGACAATTATACT+TGG | + | chr8.3:10493194-10493213 | None:intergenic | 30.0% | |
AAAAGAAATGGAGAGAACAA+TGG | - | chr8.3:10492619-10492638 | MS.gene58009:intron | 30.0% | |
AATACATTACCTTCATTGTG+TGG | + | chr8.3:10493117-10493136 | None:intergenic | 30.0% | |
ATAGGCAAAAATTAACCGTA+TGG | - | chr8.3:10493774-10493793 | MS.gene58009:intron | 30.0% | |
ATGATGAATTGAATAGGCTA+GGG | + | chr8.3:10494245-10494264 | None:intergenic | 30.0% | |
ATTTACAAGAGCAGAGAAAT+TGG | - | chr8.3:10495322-10495341 | MS.gene58009:CDS | 30.0% | |
CATGTTTAGATAATCGAACA+AGG | - | chr8.3:10494316-10494335 | MS.gene58009:intron | 30.0% | |
CCATTGTAAAACTAAACTTC+TGG | + | chr8.3:10494822-10494841 | None:intergenic | 30.0% | |
CTATACTTCTATCACATTCA+CGG | + | chr8.3:10494383-10494402 | None:intergenic | 30.0% | |
CTTGTTCGATTATCTAAACA+TGG | + | chr8.3:10494318-10494337 | None:intergenic | 30.0% | |
GAGAACAATGGAACAAAAAA+TGG | - | chr8.3:10492631-10492650 | MS.gene58009:intron | 30.0% | |
GCCTATTCAATTCATCATAT+AGG | - | chr8.3:10494247-10494266 | MS.gene58009:intron | 30.0% | |
GGGTAACATTAAAACACATT+CGG | - | chr8.3:10494656-10494675 | MS.gene58009:CDS | 30.0% | |
GTAGCAAATAAGTTCATTGT+TGG | + | chr8.3:10494932-10494951 | None:intergenic | 30.0% | |
TATACTTCTATCACATTCAC+GGG | + | chr8.3:10494382-10494401 | None:intergenic | 30.0% | |
TATATGGAAGCAAGAAACAA+GGG | + | chr8.3:10495426-10495445 | None:intergenic | 30.0% | |
TATGATGAATTGAATAGGCT+AGG | + | chr8.3:10494246-10494265 | None:intergenic | 30.0% | |
TATGTATGTTTGTATAGGGA+TGG | + | chr8.3:10493589-10493608 | None:intergenic | 30.0% | |
TTATATGGAAGCAAGAAACA+AGG | + | chr8.3:10495427-10495446 | None:intergenic | 30.0% | |
TTTACAAGAGCAGAGAAATT+GGG | - | chr8.3:10495323-10495342 | MS.gene58009:CDS | 30.0% | |
! | AAGTAGTGTTATTATCGTGT+TGG | + | chr8.3:10493533-10493552 | None:intergenic | 30.0% |
! | AATCAGTTCAGAATGTGTTT+TGG | - | chr8.3:10494607-10494626 | MS.gene58009:CDS | 30.0% |
! | ACTGGGTTTTTGTAAATTCT+TGG | - | chr8.3:10494404-10494423 | MS.gene58009:intron | 30.0% |
! | AGTAGTGTTATTATCGTGTT+GGG | + | chr8.3:10493532-10493551 | None:intergenic | 30.0% |
! | ATGTGATAGAAGTATAGAAC+TGG | - | chr8.3:10494386-10494405 | MS.gene58009:intron | 30.0% |
! | ATTGATTTACTGATACTCAC+AGG | + | chr8.3:10494218-10494237 | None:intergenic | 30.0% |
! | CAGAATATTTCCTTTTGATG+GGG | - | chr8.3:10495571-10495590 | MS.gene58009:CDS | 30.0% |
! | GTTCTATTTTATGGCATGAA+AGG | - | chr8.3:10493247-10493266 | MS.gene58009:intron | 30.0% |
! | TACCACATAAGATTTTTCCA+AGG | + | chr8.3:10494442-10494461 | None:intergenic | 30.0% |
! | TGTACAGAGACAAAAACTTT+TGG | + | chr8.3:10494500-10494519 | None:intergenic | 30.0% |
! | TGTGATAGAAGTATAGAACT+GGG | - | chr8.3:10494387-10494406 | MS.gene58009:intron | 30.0% |
!! | AAATGGTGTTATTATCGTGT+TGG | - | chr8.3:10493689-10493708 | MS.gene58009:intron | 30.0% |
!! | AAGTTGATGAAAACATTGTG+AGG | - | chr8.3:10495741-10495760 | MS.gene58009:CDS | 30.0% |
!! | AGTTGATGAAAACATTGTGA+GGG | - | chr8.3:10495742-10495761 | MS.gene58009:CDS | 30.0% |
!! | ATTATGCTTAGCTTGTGATA+TGG | - | chr8.3:10492657-10492676 | MS.gene58009:intron | 30.0% |
!! | TTTGGATTGGTTATTAGTGA+CGG | - | chr8.3:10492907-10492926 | MS.gene58009:intron | 30.0% |
!!! | AACCGTATGGTTTTATAGTT+AGG | - | chr8.3:10493787-10493806 | MS.gene58009:intron | 30.0% |
!!! | CCAGAAGTTTAGTTTTACAA+TGG | - | chr8.3:10494819-10494838 | MS.gene58009:intron | 30.0% |
!!! | GAGGATTTGGTTCTATTTTA+TGG | - | chr8.3:10493238-10493257 | MS.gene58009:intron | 30.0% |
!!! | TATGTTCTCTGCTGTTTTTT+CGG | - | chr8.3:10492684-10492703 | MS.gene58009:intron | 30.0% |
AACAAACAGGGTCCTAATTA+TGG | + | chr8.3:10494583-10494602 | None:intergenic | 35.0% | |
AAGATTGAGGATGAGAGATA+AGG | + | chr8.3:10495533-10495552 | None:intergenic | 35.0% | |
ACAAACAGGGTCCTAATTAT+GGG | + | chr8.3:10494582-10494601 | None:intergenic | 35.0% | |
ACATTCGGTTCCTAATTATG+AGG | - | chr8.3:10494671-10494690 | MS.gene58009:CDS | 35.0% | |
ACTATATTGATCATCTCCCA+TGG | + | chr8.3:10493984-10494003 | None:intergenic | 35.0% | |
AGAATGGGAACTGCAAATAA+CGG | + | chr8.3:10495496-10495515 | None:intergenic | 35.0% | |
AGCCTTGGAAAAATCTTATG+TGG | - | chr8.3:10494437-10494456 | MS.gene58009:intron | 35.0% | |
AGTAAGAGGATACTGATCTT+TGG | - | chr8.3:10493830-10493849 | MS.gene58009:intron | 35.0% | |
ATACTTCTATCACATTCACG+GGG | + | chr8.3:10494381-10494400 | None:intergenic | 35.0% | |
ATAGCAACTGCGAAAAGAAA+TGG | - | chr8.3:10492607-10492626 | MS.gene58009:intron | 35.0% | |
ATATGGAAGCAAGAAACAAG+GGG | + | chr8.3:10495425-10495444 | None:intergenic | 35.0% | |
ATCTCTCATCCTCAATCTTA+AGG | - | chr8.3:10495534-10495553 | MS.gene58009:CDS | 35.0% | |
ATCTGCGATTAAGCAATCAA+TGG | - | chr8.3:10495690-10495709 | MS.gene58009:CDS | 35.0% | |
ATTATGCTGAGCTAACTCTT+TGG | + | chr8.3:10493941-10493960 | None:intergenic | 35.0% | |
ATTTACTGATACTCACAGGA+AGG | + | chr8.3:10494214-10494233 | None:intergenic | 35.0% | |
CACTGGGTTTATATTTGGAT+TGG | - | chr8.3:10492894-10492913 | MS.gene58009:intron | 35.0% | |
CCTGCACAATCAATAAAATG+TGG | + | chr8.3:10495062-10495081 | None:intergenic | 35.0% | |
CGATTGTTGTATTGCTCATA+GGG | - | chr8.3:10495085-10495104 | MS.gene58009:CDS | 35.0% | |
CTAAACATGGAAAAAAGAGG+TGG | + | chr8.3:10494305-10494324 | None:intergenic | 35.0% | |
GAGCCTGTTGTATTAAATTG+AGG | + | chr8.3:10494884-10494903 | None:intergenic | 35.0% | |
GTACAAGTGTGATGATTCTT+GGG | - | chr8.3:10495712-10495731 | MS.gene58009:CDS | 35.0% | |
TATAGCCTCTAACAATTGTG+TGG | + | chr8.3:10494709-10494728 | None:intergenic | 35.0% | |
TCAATCAGAAGCCCATAATT+AGG | - | chr8.3:10494568-10494587 | MS.gene58009:intron | 35.0% | |
TCCTGAGTGATAAGCATAAT+CGG | - | chr8.3:10492527-10492546 | MS.gene58009:CDS | 35.0% | |
TGTACAGTAGTTATGTTTCC+TGG | - | chr8.3:10494514-10494533 | MS.gene58009:intron | 35.0% | |
TGTTGTTATGGTGTTTCAGT+TGG | - | chr8.3:10492977-10492996 | MS.gene58009:intron | 35.0% | |
TTACAAGAGCAGAGAAATTG+GGG | - | chr8.3:10495324-10495343 | MS.gene58009:CDS | 35.0% | |
TTGTACAGGTGTGTATACTT+TGG | - | chr8.3:10492739-10492758 | MS.gene58009:intron | 35.0% | |
! | AACACATTCTGAACTGATTC+TGG | + | chr8.3:10494606-10494625 | None:intergenic | 35.0% |
! | AGGTAGATATCCCAAAGTTT+TGG | + | chr8.3:10495283-10495302 | None:intergenic | 35.0% |
! | ATCCAGTGTCGAATAGTATA+GGG | - | chr8.3:10493629-10493648 | MS.gene58009:intron | 35.0% |
! | ATTTCTTTTCGCAGTTGCTA+TGG | + | chr8.3:10492608-10492627 | None:intergenic | 35.0% |
! | CAGTTTTGCTCCTCATAATT+AGG | + | chr8.3:10494684-10494703 | None:intergenic | 35.0% |
! | CATAGATCATTTGAAGCATC+AGG | + | chr8.3:10495602-10495621 | None:intergenic | 35.0% |
! | GAAAAAAGAGGTGGTGTTAA+CGG | + | chr8.3:10494296-10494315 | None:intergenic | 35.0% |
! | TATCCAGTGTCGAATAGTAT+AGG | - | chr8.3:10493628-10493647 | MS.gene58009:intron | 35.0% |
! | TGTACTTGCTAGAATCTGTA+AGG | - | chr8.3:10493328-10493347 | MS.gene58009:intron | 35.0% |
! | TTTGGGATATCTACCTTGAT+GGG | - | chr8.3:10495287-10495306 | MS.gene58009:CDS | 35.0% |
!! | AACTGATTCTGGAACAAACA+GGG | + | chr8.3:10494595-10494614 | None:intergenic | 35.0% |
!! | CCACATTTTATTGATTGTGC+AGG | - | chr8.3:10495059-10495078 | MS.gene58009:CDS | 35.0% |
!! | CTAACTCTTTGGCTTGTAAT+GGG | + | chr8.3:10493930-10493949 | None:intergenic | 35.0% |
!! | TTGACTTGGAACCAAATCAA+GGG | - | chr8.3:10495195-10495214 | MS.gene58009:CDS | 35.0% |
!!! | AAATTGAGGTTTTCAAGTGC+AGG | + | chr8.3:10494870-10494889 | None:intergenic | 35.0% |
!!! | ATGTTCTCTGCTGTTTTTTC+GGG | - | chr8.3:10492685-10492704 | MS.gene58009:intron | 35.0% |
!!! | TGAAATCTGACCGTTGATTT+TGG | + | chr8.3:10491864-10491883 | None:intergenic | 35.0% |
AACTCTTCAGTGCACAAAGA+AGG | + | chr8.3:10494954-10494973 | None:intergenic | 40.0% | |
AAGAACTTTGCTGGGCTATA+GGG | + | chr8.3:10492721-10492740 | None:intergenic | 40.0% | |
AAGGAACTTGCAAAGAAACC+AGG | + | chr8.3:10494535-10494554 | None:intergenic | 40.0% | |
ACCGATTATGCTTATCACTC+AGG | + | chr8.3:10492531-10492550 | None:intergenic | 40.0% | |
ACCTGTACAAGAACTTTGCT+GGG | + | chr8.3:10492729-10492748 | None:intergenic | 40.0% | |
ACTGCTGACAGAAAAACTTC+TGG | + | chr8.3:10495355-10495374 | None:intergenic | 40.0% | |
AGAAACCAGAGCTTCAACAA+TGG | + | chr8.3:10493431-10493450 | None:intergenic | 40.0% | |
AGTTACAAACATGCTGACCA+TGG | - | chr8.3:10493964-10493983 | MS.gene58009:intron | 40.0% | |
AGTTGTTGATGTGAAACCAC+AGG | + | chr8.3:10495150-10495169 | None:intergenic | 40.0% | |
ATCCCTATACTATTCGACAC+TGG | + | chr8.3:10493634-10493653 | None:intergenic | 40.0% | |
ATCTGTAAGGTGGCTTCTAT+TGG | - | chr8.3:10493341-10493360 | MS.gene58009:intron | 40.0% | |
ATGAAACAAGGGATTGAGGT+GGG | + | chr8.3:10493756-10493775 | None:intergenic | 40.0% | |
CATCCTCAATCTTAAGGAGT+CGG | - | chr8.3:10495540-10495559 | MS.gene58009:CDS | 40.0% | |
CTCAGGAAGTAATTCCTCAA+CGG | + | chr8.3:10492514-10492533 | None:intergenic | 40.0% | |
CTGATCAATGTCAACTCCTA+GGG | + | chr8.3:10494135-10494154 | None:intergenic | 40.0% | |
CTGTTCCACACAATTGTTAG+AGG | - | chr8.3:10494701-10494720 | MS.gene58009:intron | 40.0% | |
CTTGAACTTGCGTTTCATGA+AGG | - | chr8.3:10495021-10495040 | MS.gene58009:CDS | 40.0% | |
GATTGAGATTAAGGAGGACA+AGG | + | chr8.3:10494554-10494573 | None:intergenic | 40.0% | |
GCGATTGTTGTATTGCTCAT+AGG | - | chr8.3:10495084-10495103 | MS.gene58009:CDS | 40.0% | |
GCTTCTGATTGAGATTAAGG+AGG | + | chr8.3:10494560-10494579 | None:intergenic | 40.0% | |
GGTACAAGTGTGATGATTCT+TGG | - | chr8.3:10495711-10495730 | MS.gene58009:CDS | 40.0% | |
GGTATGTCTGTTTCAACTCA+TGG | - | chr8.3:10493476-10493495 | MS.gene58009:intron | 40.0% | |
GTTACAAACATGCTGACCAT+GGG | - | chr8.3:10493965-10493984 | MS.gene58009:intron | 40.0% | |
GTTATTATCGTGTTGGAAGG+TGG | - | chr8.3:10493696-10493715 | MS.gene58009:intron | 40.0% | |
TATGAAACAAGGGATTGAGG+TGG | + | chr8.3:10493757-10493776 | None:intergenic | 40.0% | |
TCAATCTTAAGGAGTCGGTT+TGG | - | chr8.3:10495545-10495564 | MS.gene58009:CDS | 40.0% | |
TCTGATCAATGTCAACTCCT+AGG | + | chr8.3:10494136-10494155 | None:intergenic | 40.0% | |
TCTGTTTCAACTCATGGCTT+TGG | - | chr8.3:10493482-10493501 | MS.gene58009:intron | 40.0% | |
TGGGCTTCTGATTGAGATTA+AGG | + | chr8.3:10494563-10494582 | None:intergenic | 40.0% | |
TGTTATGGTGTTTCAGTTGG+TGG | - | chr8.3:10492980-10492999 | MS.gene58009:intron | 40.0% | |
TTAGTAGAACCCCCTTGATT+TGG | + | chr8.3:10495209-10495228 | None:intergenic | 40.0% | |
TTCACGGGGTTAAAATGCTA+AGG | + | chr8.3:10494367-10494386 | None:intergenic | 40.0% | |
TTGGGATATCTACCTTGATG+GGG | - | chr8.3:10495288-10495307 | MS.gene58009:CDS | 40.0% | |
TTTGTATTTGGCTGAGAGAG+AGG | - | chr8.3:10493219-10493238 | MS.gene58009:intron | 40.0% | |
! | AAACCGACTCCTTAAGATTG+AGG | + | chr8.3:10495546-10495565 | None:intergenic | 40.0% |
! | ACCTCAATCCCTTGTTTCAT+AGG | - | chr8.3:10493756-10493775 | MS.gene58009:intron | 40.0% |
! | ACTTGCTAGAATCTGTAAGG+TGG | - | chr8.3:10493331-10493350 | MS.gene58009:intron | 40.0% |
! | AGTGTCGAATAGTATAGGGA+TGG | - | chr8.3:10493633-10493652 | MS.gene58009:intron | 40.0% |
! | AGTGTTATTATCGTGTTGGG+AGG | + | chr8.3:10493529-10493548 | None:intergenic | 40.0% |
! | ATTGCTCATAGGGTATTCTC+TGG | - | chr8.3:10495095-10495114 | MS.gene58009:CDS | 40.0% |
! | CATCAGCATTGCTCATTTTC+TGG | + | chr8.3:10492561-10492580 | None:intergenic | 40.0% |
! | GGATAATGTAGGCTTTGGTT+TGG | + | chr8.3:10493735-10493754 | None:intergenic | 40.0% |
! | GGGTATTCTCTGGTATTTTG+CGG | - | chr8.3:10495105-10495124 | MS.gene58009:CDS | 40.0% |
! | GTTTTTCTGTCAGCAGTGTA+AGG | - | chr8.3:10495358-10495377 | MS.gene58009:CDS | 40.0% |
! | TGACTTGGAACCAAATCAAG+GGG | - | chr8.3:10495196-10495215 | MS.gene58009:CDS | 40.0% |
! | TGTTGAAGCTCTGGTTTCTT+TGG | - | chr8.3:10493432-10493451 | MS.gene58009:intron | 40.0% |
! | TTGTTCATAGCTTGCAAGGT+TGG | + | chr8.3:10493022-10493041 | None:intergenic | 40.0% |
!! | AGATATCCCAAAGTTTTGGC+TGG | + | chr8.3:10495279-10495298 | None:intergenic | 40.0% |
!! | CTTGACTTGGAACCAAATCA+AGG | - | chr8.3:10495194-10495213 | MS.gene58009:CDS | 40.0% |
!! | CTTGGCTAAGATTTTAGCCT+TGG | - | chr8.3:10494422-10494441 | MS.gene58009:intron | 40.0% |
!! | CTTTGGGATATCTACCTTGA+TGG | - | chr8.3:10495286-10495305 | MS.gene58009:CDS | 40.0% |
!! | GAACTGATTCTGGAACAAAC+AGG | + | chr8.3:10494596-10494615 | None:intergenic | 40.0% |
!! | GCTAACTCTTTGGCTTGTAA+TGG | + | chr8.3:10493931-10493950 | None:intergenic | 40.0% |
!! | GGTGTTATTATCGTGTTGGA+AGG | - | chr8.3:10493693-10493712 | MS.gene58009:intron | 40.0% |
!! | GTGTGTATACTTTGGAGCTT+AGG | - | chr8.3:10492747-10492766 | MS.gene58009:intron | 40.0% |
!! | TTCAACTCATGGCTTTGGTT+TGG | - | chr8.3:10493487-10493506 | MS.gene58009:intron | 40.0% |
!! | TTTCATGAATTCGGTGTTGC+AGG | - | chr8.3:10492471-10492490 | MS.gene58009:CDS | 40.0% |
!!! | AATCTGACCGTTGATTTTGG+AGG | + | chr8.3:10491861-10491880 | None:intergenic | 40.0% |
AACAAGGGGAAGCTTCCTTA+TGG | + | chr8.3:10495411-10495430 | None:intergenic | 45.0% | |
AACATTGAAATGCAGGGCGA+GGG | - | chr8.3:10494089-10494108 | MS.gene58009:intron | 45.0% | |
AGGAAGTAATTCCTCAACGG+TGG | + | chr8.3:10492511-10492530 | None:intergenic | 45.0% | |
AGGTGGGATAATGTAGGCTT+TGG | + | chr8.3:10493740-10493759 | None:intergenic | 45.0% | |
ATGACCAGGAGACATTGATG+CGG | + | chr8.3:10492134-10492153 | None:intergenic | 45.0% | |
ATGCCTTTGATCAGAGGTCT+CGG | + | chr8.3:10492792-10492811 | None:intergenic | 45.0% | |
ATGCTAAGGCAACTTTCTCC+CGG | + | chr8.3:10494353-10494372 | None:intergenic | 45.0% | |
CAACACTGACACATCAACAC+TGG | + | chr8.3:10492817-10492836 | None:intergenic | 45.0% | |
CAAGAACTTTGCTGGGCTAT+AGG | + | chr8.3:10492722-10492741 | None:intergenic | 45.0% | |
CAAGTGAGATGTCTACGCAT+GGG | + | chr8.3:10495178-10495197 | None:intergenic | 45.0% | |
CAATCCTTCTTGCAATGGTG+AGG | - | chr8.3:10495247-10495266 | MS.gene58009:CDS | 45.0% | |
CACCTGTACAAGAACTTTGC+TGG | + | chr8.3:10492730-10492749 | None:intergenic | 45.0% | |
CACGATCGTAAACCTGATCA+CGG | + | chr8.3:10492204-10492223 | None:intergenic | 45.0% | |
CACTCTGGTAAGTTAGATGC+TGG | - | chr8.3:10495653-10495672 | MS.gene58009:CDS | 45.0% | |
CCGATTCCAGCCAAAACTTT+GGG | - | chr8.3:10495270-10495289 | MS.gene58009:CDS | 45.0% | |
CCTTGCAAGCTATGAACAAC+AGG | - | chr8.3:10493023-10493042 | MS.gene58009:intron | 45.0% | |
CGTAGACATCTCACTTGACT+TGG | - | chr8.3:10495181-10495200 | MS.gene58009:CDS | 45.0% | |
CTCACCATTGCAAGAAGGAT+TGG | + | chr8.3:10495249-10495268 | None:intergenic | 45.0% | |
CTCTCAAGCAGATGTCCATA+AGG | - | chr8.3:10495393-10495412 | MS.gene58009:CDS | 45.0% | |
CTGGATATGCCTTTGATCAG+AGG | + | chr8.3:10492798-10492817 | None:intergenic | 45.0% | |
CTTCACAGGGACAACATATC+TGG | + | chr8.3:10493288-10493307 | None:intergenic | 45.0% | |
GACTTGGAACCAAATCAAGG+GGG | - | chr8.3:10495197-10495216 | MS.gene58009:CDS | 45.0% | |
GAGGAATTTCGTGAGGATCA+CGG | + | chr8.3:10491997-10492016 | None:intergenic | 45.0% | |
GATCCATGAAAAGGTGGACA+AGG | - | chr8.3:10493080-10493099 | MS.gene58009:intron | 45.0% | |
GATGCGGAGTAGATGACATA+GGG | + | chr8.3:10492300-10492319 | None:intergenic | 45.0% | |
GATGTTATGTGTATGGCCTG+TGG | - | chr8.3:10495131-10495150 | MS.gene58009:CDS | 45.0% | |
GCCTATGAAACAAGGGATTG+AGG | + | chr8.3:10493760-10493779 | None:intergenic | 45.0% | |
GCGGTCAGATGTTATGTGTA+TGG | - | chr8.3:10495124-10495143 | MS.gene58009:CDS | 45.0% | |
GCTTCCAATCCTTCTTGCAA+TGG | - | chr8.3:10495242-10495261 | MS.gene58009:CDS | 45.0% | |
GCTTGATGGGATCCATGAAA+AGG | - | chr8.3:10493071-10493090 | MS.gene58009:intron | 45.0% | |
GGAAGAGTGACATGATACAG+CGG | + | chr8.3:10492077-10492096 | None:intergenic | 45.0% | |
GGATTGAGGTGGGATAATGT+AGG | + | chr8.3:10493746-10493765 | None:intergenic | 45.0% | |
GGCAGAATCATCACCATTTG+CGG | + | chr8.3:10492587-10492606 | None:intergenic | 45.0% | |
GGGAAATCAGGAACGTTGAT+CGG | + | chr8.3:10492412-10492431 | None:intergenic | 45.0% | |
GTCGAATAGTATAGGGATGG+CGG | - | chr8.3:10493636-10493655 | MS.gene58009:intron | 45.0% | |
GTGACATGTCCAGTGAGAAT+GGG | + | chr8.3:10495511-10495530 | None:intergenic | 45.0% | |
GTTATTATCGTGTTGGGAGG+AGG | + | chr8.3:10493526-10493545 | None:intergenic | 45.0% | |
TAACACCATCGAGATAGCAC+AGG | + | chr8.3:10494184-10494203 | None:intergenic | 45.0% | |
TAACATTGAAATGCAGGGCG+AGG | - | chr8.3:10494088-10494107 | MS.gene58009:intron | 45.0% | |
TATGTCATCTACTCCGCATC+CGG | - | chr8.3:10492300-10492319 | MS.gene58009:CDS | 45.0% | |
TCAAGGGGGTTCTACTAAGA+TGG | - | chr8.3:10495211-10495230 | MS.gene58009:CDS | 45.0% | |
TCAAGTGAGATGTCTACGCA+TGG | + | chr8.3:10495179-10495198 | None:intergenic | 45.0% | |
TCGAACCATTGTTGAAGCTC+TGG | - | chr8.3:10493423-10493442 | MS.gene58009:intron | 45.0% | |
TGATGGGATCCATGAAAAGG+TGG | - | chr8.3:10493074-10493093 | MS.gene58009:intron | 45.0% | |
TTGAAGGACGGTAATCCACT+CGG | + | chr8.3:10492345-10492364 | None:intergenic | 45.0% | |
TTGCAGTGAGGAATTTCGTG+AGG | + | chr8.3:10492004-10492023 | None:intergenic | 45.0% | |
TTTGCAGTTCCCATTCTCAC+TGG | - | chr8.3:10495499-10495518 | MS.gene58009:CDS | 45.0% | |
TTTGGCTGAGAGAGAGGATT+TGG | - | chr8.3:10493225-10493244 | MS.gene58009:intron | 45.0% | |
! | AATGCTGATGATGCCGCAAA+TGG | - | chr8.3:10492571-10492590 | MS.gene58009:CDS | 45.0% |
! | ATAGCTTGCAAGGTTGGACT+TGG | + | chr8.3:10493016-10493035 | None:intergenic | 45.0% |
! | CCTGTTGTTCATAGCTTGCA+AGG | + | chr8.3:10493026-10493045 | None:intergenic | 45.0% |
! | GATCCTTGTCCACCTTTTCA+TGG | + | chr8.3:10493086-10493105 | None:intergenic | 45.0% |
! | TGCTATCTCGATGGTGTTAG+CGG | - | chr8.3:10494185-10494204 | MS.gene58009:intron | 45.0% |
!! | TTTCTGAGATTCTCCGGATG+CGG | + | chr8.3:10492316-10492335 | None:intergenic | 45.0% |
!!! | CCCAAAGTTTTGGCTGGAAT+CGG | + | chr8.3:10495273-10495292 | None:intergenic | 45.0% |
AAACATTGTGAGGGCTGCTC+AGG | - | chr8.3:10495751-10495770 | MS.gene58009:CDS | 50.0% | |
AACAAGGCTTGTCTATCCCC+GGG | - | chr8.3:10494332-10494351 | MS.gene58009:intron | 50.0% | |
AACATTGTGAGGGCTGCTCA+GGG | - | chr8.3:10495752-10495771 | MS.gene58009:CDS | 50.0% | |
ACTCCTGCATAGAGGGAGTA+TGG | - | chr8.3:10494635-10494654 | MS.gene58009:CDS | 50.0% | |
AGACATTGATGCGGCATGTG+CGG | + | chr8.3:10492125-10492144 | None:intergenic | 50.0% | |
ATGAGATGCAGGCATAGAGG+CGG | + | chr8.3:10492051-10492070 | None:intergenic | 50.0% | |
ATGGAGGGAGAGGAATGGTT+TGG | + | chr8.3:10491930-10491949 | None:intergenic | 50.0% | |
CAGAGGTCTCGGTGATAAAC+AGG | + | chr8.3:10492781-10492800 | None:intergenic | 50.0% | |
CAGTTATGGAGGGAGAGGAA+TGG | + | chr8.3:10491935-10491954 | None:intergenic | 50.0% | |
CGACGTAAGCCACACAATGA+AGG | - | chr8.3:10493105-10493124 | MS.gene58009:intron | 50.0% | |
GAACAAGGCTTGTCTATCCC+CGG | - | chr8.3:10494331-10494350 | MS.gene58009:intron | 50.0% | |
GAATTTCGTGAGGATCACGG+CGG | + | chr8.3:10491994-10492013 | None:intergenic | 50.0% | |
GCAAACGCAGCAGAAAAGCT+CGG | + | chr8.3:10492182-10492201 | None:intergenic | 50.0% | |
GCCCAGCAAAGTTCTTGTAC+AGG | - | chr8.3:10492725-10492744 | MS.gene58009:intron | 50.0% | |
GGATGCGGAGTAGATGACAT+AGG | + | chr8.3:10492301-10492320 | None:intergenic | 50.0% | |
GGATTACCGTCCTTCAACTC+CGG | - | chr8.3:10492348-10492367 | MS.gene58009:CDS | 50.0% | |
GGTGACATGTCCAGTGAGAA+TGG | + | chr8.3:10495512-10495531 | None:intergenic | 50.0% | |
GTAGATCCGGAGTTGAAGGA+CGG | + | chr8.3:10492357-10492376 | None:intergenic | 50.0% | |
GTTTGATCCGGAGGCAGTTA+TGG | + | chr8.3:10491949-10491968 | None:intergenic | 50.0% | |
TACCCATACTCCCTCTATGC+AGG | + | chr8.3:10494641-10494660 | None:intergenic | 50.0% | |
TCAACGTTCCTGATTTCCCG+CGG | - | chr8.3:10492413-10492432 | MS.gene58009:CDS | 50.0% | |
TCACACCTGTGCTATCTCGA+TGG | - | chr8.3:10494176-10494195 | MS.gene58009:intron | 50.0% | |
TCACCGAGACCTCTGATCAA+AGG | - | chr8.3:10492786-10492805 | MS.gene58009:intron | 50.0% | |
TCAGCAGTGTAAGGTGAAGC+AGG | - | chr8.3:10495367-10495386 | MS.gene58009:CDS | 50.0% | |
TCAGGCTCATCCCCATCAAA+AGG | + | chr8.3:10495584-10495603 | None:intergenic | 50.0% | |
TCGATTGCGATCTGATGACC+AGG | + | chr8.3:10492148-10492167 | None:intergenic | 50.0% | |
TCTATCCAAGCACCCCATCA+AGG | + | chr8.3:10495303-10495322 | None:intergenic | 50.0% | |
TGCTAAGGCAACTTTCTCCC+GGG | + | chr8.3:10494352-10494371 | None:intergenic | 50.0% | |
TTGCGGGGGTTGAACAATCT+CGG | - | chr8.3:10492439-10492458 | MS.gene58009:CDS | 50.0% | |
TTGCTGGGCTATAGGGAAGA+CGG | + | chr8.3:10492714-10492733 | None:intergenic | 50.0% | |
! | ATCTACCTTGATGGGGTGCT+TGG | - | chr8.3:10495295-10495314 | MS.gene58009:CDS | 50.0% |
! | CTCCTGCATAGAGGGAGTAT+GGG | - | chr8.3:10494636-10494655 | MS.gene58009:CDS | 50.0% |
! | GCCGATTCCAGCCAAAACTT+TGG | - | chr8.3:10495269-10495288 | MS.gene58009:CDS | 50.0% |
! | TTTGCTGTCGTCACTCACTC+TGG | - | chr8.3:10495638-10495657 | MS.gene58009:CDS | 50.0% |
!! | CGACGCTTTCTGAGATTCTC+CGG | + | chr8.3:10492322-10492341 | None:intergenic | 50.0% |
!! | GGAATGGTTTGGTGGAAGAG+CGG | + | chr8.3:10491919-10491938 | None:intergenic | 50.0% |
!! | TTTTTCTCCGTCGCCGATTG+TGG | + | chr8.3:10492266-10492285 | None:intergenic | 50.0% |
AACGTTCCTGATTTCCCGCG+GGG | - | chr8.3:10492415-10492434 | MS.gene58009:CDS | 55.0% | |
AACTCGGCTAAGTGGGGACA+TGG | + | chr8.3:10491893-10491912 | None:intergenic | 55.0% | |
ATTCCTCACTGCAACGCCTG+CGG | - | chr8.3:10492010-10492029 | MS.gene58009:CDS | 55.0% | |
CAACGTTCCTGATTTCCCGC+GGG | - | chr8.3:10492414-10492433 | MS.gene58009:CDS | 55.0% | |
CAGACCGTTGCGTCCACAAT+CGG | - | chr8.3:10492250-10492269 | MS.gene58009:CDS | 55.0% | |
CATGCCGCATCAATGTCTCC+TGG | - | chr8.3:10492127-10492146 | MS.gene58009:CDS | 55.0% | |
CGCATGAGATGCAGGCATAG+AGG | + | chr8.3:10492054-10492073 | None:intergenic | 55.0% | |
GAAATGCAGGGCGAGGGTTT+AGG | - | chr8.3:10494095-10494114 | MS.gene58009:intron | 55.0% | |
GATCCGGAGGCAGTTATGGA+GGG | + | chr8.3:10491945-10491964 | None:intergenic | 55.0% | |
GCTAAGGCAACTTTCTCCCG+GGG | + | chr8.3:10494351-10494370 | None:intergenic | 55.0% | |
GCTAAGTGGGGACATGGTTG+TGG | + | chr8.3:10491887-10491906 | None:intergenic | 55.0% | |
GGACTGCACTCCTGCATAGA+GGG | - | chr8.3:10494628-10494647 | MS.gene58009:CDS | 55.0% | |
TCATGTCACTCTTCCACCGC+CGG | - | chr8.3:10492082-10492101 | MS.gene58009:CDS | 55.0% | |
TCGCGTAGATCCGGAGTTGA+AGG | + | chr8.3:10492361-10492380 | None:intergenic | 55.0% | |
TCGGCCTCACCATTGCAAGA+AGG | + | chr8.3:10495254-10495273 | None:intergenic | 55.0% | |
TCTCCCTCCATAACTGCCTC+CGG | - | chr8.3:10491939-10491958 | MS.gene58009:CDS | 55.0% | |
TGAGATGCAGGCATAGAGGC+GGG | + | chr8.3:10492050-10492069 | None:intergenic | 55.0% | |
TGATCCGGAGGCAGTTATGG+AGG | + | chr8.3:10491946-10491965 | None:intergenic | 55.0% | |
TGGACTGCACTCCTGCATAG+AGG | - | chr8.3:10494627-10494646 | MS.gene58009:CDS | 55.0% | |
TGTTTCACACGCCACCGTTG+AGG | - | chr8.3:10492497-10492516 | MS.gene58009:CDS | 55.0% | |
! | GAGGGAGAGGAATGGTTTGG+TGG | + | chr8.3:10491927-10491946 | None:intergenic | 55.0% |
! | GGTCTCTTGCTTGTTGCCCT+AGG | - | chr8.3:10494116-10494135 | MS.gene58009:intron | 55.0% |
!! | ATGGTTTGGTGGAAGAGCGG+CGG | + | chr8.3:10491916-10491935 | None:intergenic | 55.0% |
AGAGCGCGTTCGCGTAGATC+CGG | + | chr8.3:10492370-10492389 | None:intergenic | 60.0% | |
ATGCAGGCATAGAGGCGGGA+AGG | + | chr8.3:10492046-10492065 | None:intergenic | 60.0% | |
CATTGATGCGGCATGTGCGG+CGG | + | chr8.3:10492122-10492141 | None:intergenic | 60.0% | |
CTACGCGAACGCGCTCTGAT+CGG | - | chr8.3:10492373-10492392 | MS.gene58009:CDS | 60.0% | |
CTGATTTCCCGCGGGGATTG+CGG | - | chr8.3:10492422-10492441 | MS.gene58009:CDS | 60.0% | |
CTGCTGCGTTTGCCGTGATC+AGG | - | chr8.3:10492189-10492208 | MS.gene58009:CDS | 60.0% | |
GGAGGCAGTTATGGAGGGAG+AGG | + | chr8.3:10491940-10491959 | None:intergenic | 60.0% | |
GGCGGCGTGAGAAATGACAC+CGG | + | chr8.3:10492104-10492123 | None:intergenic | 60.0% | |
GGCGTGAGAAATGACACCGG+CGG | + | chr8.3:10492101-10492120 | None:intergenic | 60.0% | |
GGTCTGTGCGATCACGACTG+CGG | + | chr8.3:10492236-10492255 | None:intergenic | 60.0% | |
GTGAGAAATGACACCGGCGG+TGG | + | chr8.3:10492098-10492117 | None:intergenic | 60.0% | |
GTTGCGTCCACAATCGGCGA+CGG | - | chr8.3:10492256-10492275 | MS.gene58009:CDS | 60.0% | |
TACAGCGGCGCATGAGATGC+AGG | + | chr8.3:10492062-10492081 | None:intergenic | 60.0% | |
TGATTTCCCGCGGGGATTGC+GGG | - | chr8.3:10492423-10492442 | MS.gene58009:CDS | 60.0% | |
TGCCTCCGGATCAAACCTCC+CGG | - | chr8.3:10491953-10491972 | MS.gene58009:CDS | 60.0% | |
TTCGTGAGGATCACGGCGGA+GGG | + | chr8.3:10491990-10492009 | None:intergenic | 60.0% | |
TTTCGTGAGGATCACGGCGG+AGG | + | chr8.3:10491991-10492010 | None:intergenic | 60.0% | |
! | GTCGCCGATTGTGGACGCAA+CGG | + | chr8.3:10492257-10492276 | None:intergenic | 60.0% |
!! | TCTCAGAAAGCGTCGCCGAG+TGG | - | chr8.3:10492327-10492346 | MS.gene58009:CDS | 60.0% |
AGCGGCGGAACTCGGCTAAG+TGG | + | chr8.3:10491901-10491920 | None:intergenic | 65.0% | |
ATTTCCCGCGGGGATTGCGG+GGG | - | chr8.3:10492425-10492444 | MS.gene58009:CDS | 65.0% | |
CGCAATCCCCGCGGGAAATC+AGG | + | chr8.3:10492424-10492443 | None:intergenic | 65.0% | |
CGGCGGAACTCGGCTAAGTG+GGG | + | chr8.3:10491899-10491918 | None:intergenic | 65.0% | |
CTCCGGATCAAACCTCCCGG+CGG | - | chr8.3:10491956-10491975 | MS.gene58009:CDS | 65.0% | |
GATTTCCCGCGGGGATTGCG+GGG | - | chr8.3:10492424-10492443 | MS.gene58009:CDS | 65.0% | |
GCGGCGGAACTCGGCTAAGT+GGG | + | chr8.3:10491900-10491919 | None:intergenic | 65.0% | |
GGAAGGAGCAGAGAGACCGC+AGG | + | chr8.3:10492029-10492048 | None:intergenic | 65.0% | |
GGTGGAAGAGCGGCGGAACT+CGG | + | chr8.3:10491909-10491928 | None:intergenic | 65.0% | |
TTCAACCCCCGCAATCCCCG+CGG | + | chr8.3:10492433-10492452 | None:intergenic | 65.0% | |
! | AGACCGCAGGCGTTGCAGTG+AGG | + | chr8.3:10492016-10492035 | None:intergenic | 65.0% |
CGCCGGGAGGTTTGATCCGG+AGG | + | chr8.3:10491958-10491977 | None:intergenic | 70.0% | |
GGCCGCCGGGAGGTTTGATC+CGG | + | chr8.3:10491961-10491980 | None:intergenic | 70.0% | |
GTGAGGATCACGGCGGAGGG+AGG | + | chr8.3:10491987-10492006 | None:intergenic | 70.0% | |
TCAACCCCCGCAATCCCCGC+GGG | + | chr8.3:10492432-10492451 | None:intergenic | 70.0% | |
GATCACGGCGGAGGGAGGCG+CGG | + | chr8.3:10491982-10492001 | None:intergenic | 75.0% | |
!! | AGGGAGGCGCGGCCGCCGGG+AGG | + | chr8.3:10491971-10491990 | None:intergenic | 90.0% |
!! | CGGAGGGAGGCGCGGCCGCC+GGG | + | chr8.3:10491974-10491993 | None:intergenic | 90.0% |
!! | GCGGAGGGAGGCGCGGCCGC+CGG | + | chr8.3:10491975-10491994 | None:intergenic | 90.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 10491854 | 10495841 | 10491854 | ID=MS.gene58009 |
chr8.3 | mRNA | 10491854 | 10495841 | 10491854 | ID=MS.gene58009.t1;Parent=MS.gene58009 |
chr8.3 | exon | 10494949 | 10495841 | 10494949 | ID=MS.gene58009.t1.exon1;Parent=MS.gene58009.t1 |
chr8.3 | CDS | 10494949 | 10495841 | 10494949 | ID=cds.MS.gene58009.t1;Parent=MS.gene58009.t1 |
chr8.3 | exon | 10494569 | 10494699 | 10494569 | ID=MS.gene58009.t1.exon2;Parent=MS.gene58009.t1 |
chr8.3 | CDS | 10494569 | 10494699 | 10494569 | ID=cds.MS.gene58009.t1;Parent=MS.gene58009.t1 |
chr8.3 | exon | 10491854 | 10492614 | 10491854 | ID=MS.gene58009.t1.exon3;Parent=MS.gene58009.t1 |
chr8.3 | CDS | 10491854 | 10492614 | 10491854 | ID=cds.MS.gene58009.t1;Parent=MS.gene58009.t1 |
Gene Sequence |
Protein sequence |