Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58131.t1 | XP_003630170.1 | 79 | 567 | 30 | 2 | 1 | 478 | 1 | 567 | 2.90E-211 | 744.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58131.t1 | Q5RC80 | 44.3 | 388 | 194 | 11 | 96 | 476 | 139 | 511 | 3.5e-72 | 273.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58131.t1 | G7LC87 | 79.0 | 567 | 30 | 2 | 1 | 478 | 1 | 567 | 2.1e-211 | 744.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051003 | MS.gene58131 | 0.807352 | 5.27E-50 | -1.69E-46 |
| MS.gene051903 | MS.gene58131 | 0.814477 | 1.51E-51 | -1.69E-46 |
| MS.gene056403 | MS.gene58131 | 0.804377 | 2.22E-49 | -1.69E-46 |
| MS.gene056605 | MS.gene58131 | 0.813176 | 2.92E-51 | -1.69E-46 |
| MS.gene06011 | MS.gene58131 | 0.84187 | 3.65E-58 | -1.69E-46 |
| MS.gene060763 | MS.gene58131 | 0.813396 | 2.61E-51 | -1.69E-46 |
| MS.gene060830 | MS.gene58131 | 0.84338 | 1.45E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene064542 | MS.gene58131 | PPI |
| MS.gene58131 | MS.gene73119 | PPI |
| MS.gene049629 | MS.gene58131 | PPI |
| MS.gene58131 | MS.gene008393 | PPI |
| MS.gene55683 | MS.gene58131 | PPI |
| MS.gene035805 | MS.gene58131 | PPI |
| MS.gene05085 | MS.gene58131 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58131.t1 | MTR_8g092550 | 96.500 | 400 | 14 | 0 | 79 | 478 | 168 | 567 | 0.0 | 800 |
| MS.gene58131.t1 | MTR_8g092550 | 98.571 | 70 | 1 | 0 | 1 | 70 | 1 | 70 | 1.66e-36 | 142 |
| MS.gene58131.t1 | MTR_3g095230 | 84.518 | 394 | 52 | 4 | 92 | 477 | 194 | 586 | 0.0 | 690 |
| MS.gene58131.t1 | MTR_3g095230 | 84.334 | 383 | 51 | 4 | 92 | 466 | 194 | 575 | 0.0 | 671 |
| MS.gene58131.t1 | MTR_7g106440 | 27.411 | 197 | 131 | 5 | 99 | 288 | 95 | 286 | 1.37e-12 | 68.9 |
| MS.gene58131.t1 | MTR_4g104470 | 25.510 | 196 | 110 | 6 | 107 | 288 | 117 | 290 | 1.94e-12 | 68.2 |
| MS.gene58131.t1 | MTR_7g094660 | 27.179 | 195 | 113 | 8 | 107 | 287 | 634 | 813 | 3.13e-12 | 69.3 |
| MS.gene58131.t1 | MTR_1g020080 | 27.869 | 183 | 114 | 7 | 114 | 288 | 191 | 363 | 4.45e-12 | 68.2 |
| MS.gene58131.t1 | MTR_5g037180 | 29.843 | 191 | 117 | 6 | 104 | 287 | 32 | 212 | 1.32e-11 | 65.1 |
| MS.gene58131.t1 | MTR_7g096260 | 28.497 | 193 | 112 | 7 | 107 | 287 | 493 | 671 | 1.98e-11 | 67.0 |
| MS.gene58131.t1 | MTR_7g096260 | 28.497 | 193 | 112 | 7 | 107 | 287 | 479 | 657 | 2.03e-11 | 66.6 |
| MS.gene58131.t1 | MTR_8g463890 | 24.895 | 237 | 164 | 3 | 94 | 330 | 54 | 276 | 2.07e-11 | 66.2 |
| MS.gene58131.t1 | MTR_8g022050 | 28.230 | 209 | 125 | 8 | 101 | 303 | 51 | 240 | 2.36e-11 | 65.9 |
| MS.gene58131.t1 | MTR_3g065190 | 25.954 | 262 | 166 | 10 | 109 | 365 | 20 | 258 | 3.24e-11 | 65.5 |
| MS.gene58131.t1 | MTR_4g122650 | 30.058 | 173 | 101 | 5 | 115 | 282 | 90 | 247 | 3.38e-11 | 66.2 |
| MS.gene58131.t1 | MTR_1g064230 | 28.947 | 190 | 121 | 7 | 111 | 288 | 83 | 270 | 3.42e-11 | 64.3 |
| MS.gene58131.t1 | MTR_3g084040 | 38.462 | 78 | 47 | 1 | 215 | 292 | 37 | 113 | 3.78e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58131.t1 | AT5G09880 | 60.701 | 542 | 130 | 12 | 1 | 475 | 1 | 526 | 0.0 | 579 |
| MS.gene58131.t1 | AT2G16940 | 61.965 | 397 | 136 | 7 | 92 | 474 | 19 | 414 | 2.95e-162 | 466 |
| MS.gene58131.t1 | AT2G16940 | 61.965 | 397 | 136 | 7 | 92 | 474 | 19 | 414 | 2.95e-162 | 466 |
| MS.gene58131.t1 | AT2G16940 | 61.290 | 403 | 138 | 8 | 86 | 474 | 206 | 604 | 1.03e-159 | 466 |
| MS.gene58131.t1 | AT2G16940 | 61.697 | 389 | 135 | 6 | 99 | 474 | 168 | 555 | 7.53e-159 | 462 |
| MS.gene58131.t1 | AT2G16940 | 60.147 | 409 | 139 | 8 | 89 | 474 | 186 | 593 | 4.01e-156 | 456 |
| MS.gene58131.t1 | AT1G48920 | 29.240 | 171 | 112 | 3 | 113 | 276 | 297 | 465 | 6.81e-15 | 77.4 |
| MS.gene58131.t1 | AT3G14100 | 29.000 | 200 | 121 | 8 | 101 | 298 | 48 | 228 | 1.71e-12 | 69.7 |
| MS.gene58131.t1 | AT4G16280 | 30.636 | 173 | 100 | 5 | 115 | 282 | 47 | 204 | 2.46e-12 | 69.7 |
| MS.gene58131.t1 | AT4G16280 | 30.636 | 173 | 100 | 5 | 115 | 282 | 122 | 279 | 2.61e-12 | 69.7 |
| MS.gene58131.t1 | AT4G16280 | 30.636 | 173 | 100 | 5 | 115 | 282 | 122 | 279 | 3.03e-12 | 69.3 |
| MS.gene58131.t1 | AT1G54080 | 27.830 | 212 | 122 | 9 | 101 | 310 | 52 | 234 | 4.55e-12 | 68.2 |
| MS.gene58131.t1 | AT3G52380 | 23.757 | 181 | 126 | 3 | 115 | 288 | 118 | 293 | 1.26e-11 | 66.2 |
| MS.gene58131.t1 | AT4G34110 | 28.743 | 167 | 102 | 4 | 114 | 278 | 37 | 188 | 1.31e-11 | 67.4 |
| MS.gene58131.t1 | AT2G37220 | 42.500 | 80 | 44 | 2 | 211 | 289 | 88 | 166 | 2.04e-11 | 65.1 |
| MS.gene58131.t1 | AT3G18610 | 30.323 | 155 | 96 | 4 | 113 | 262 | 324 | 471 | 2.05e-11 | 66.6 |
| MS.gene58131.t1 | AT3G18610 | 30.323 | 155 | 96 | 4 | 113 | 262 | 354 | 501 | 2.72e-11 | 66.2 |
| MS.gene58131.t1 | AT3G18610 | 30.323 | 155 | 96 | 4 | 113 | 262 | 384 | 531 | 3.61e-11 | 65.9 |
| MS.gene58131.t1 | AT5G61030 | 39.506 | 81 | 47 | 2 | 215 | 294 | 41 | 120 | 5.28e-11 | 64.3 |
| MS.gene58131.t1 | AT5G61030 | 39.506 | 81 | 47 | 2 | 215 | 294 | 41 | 120 | 5.28e-11 | 64.3 |
| MS.gene58131.t1 | AT5G54900 | 27.485 | 171 | 108 | 4 | 122 | 288 | 170 | 328 | 7.85e-11 | 64.3 |
| MS.gene58131.t1 | AT2G41060 | 27.778 | 198 | 119 | 5 | 85 | 271 | 100 | 284 | 8.02e-11 | 64.3 |
| MS.gene58131.t1 | AT2G41060 | 27.778 | 198 | 119 | 5 | 85 | 271 | 100 | 284 | 8.02e-11 | 64.3 |
| MS.gene58131.t1 | AT2G41060 | 27.778 | 198 | 119 | 5 | 85 | 271 | 100 | 284 | 8.02e-11 | 64.3 |
Find 134 sgRNAs with CRISPR-Local
Find 442 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTCTTGAGTGGGCATTTA+AGG | 0.130464 | 4.2:+9726197 | None:intergenic |
| ACAGTTCTCTGATCCCTTTC+TGG | 0.134704 | 4.2:+9729980 | None:intergenic |
| TTTATATGAAGCCAAATTTA+AGG | 0.136565 | 4.2:-9725197 | MS.gene58131:CDS |
| TCAAGATTCGTCCTTAAATT+TGG | 0.179510 | 4.2:+9725186 | None:intergenic |
| ACTTGACTTGCAGGAGATTC+AGG | 0.222696 | 4.2:-9730036 | MS.gene58131:intron |
| AAGGCAGCTCAGAGTTTAAA+TGG | 0.226346 | 4.2:-9727119 | MS.gene58131:CDS |
| ACGGGACACTGCAAGGGTTT+TGG | 0.238665 | 4.2:-9727257 | MS.gene58131:CDS |
| TCAGAGGGTTTCACCATTAC+AGG | 0.275311 | 4.2:+9727749 | None:intergenic |
| TCAGAGTTTAAATGGGAAAT+TGG | 0.278327 | 4.2:-9727111 | MS.gene58131:CDS |
| CGTCGTCGGCGCCGTGCTTC+CGG | 0.318437 | 4.2:+9731739 | None:intergenic |
| TTGGATGAATCCTTGTCTTC+CGG | 0.347395 | 4.2:+9731807 | None:intergenic |
| CTCTCTGGCCAACTACTTCT+CGG | 0.351599 | 4.2:-9727776 | MS.gene58131:CDS |
| CTGTTTGGTTCAATTCTTCA+AGG | 0.356909 | 4.2:-9730410 | MS.gene58131:intron |
| ATGCTAAAAGCCTGCTGAAC+AGG | 0.358990 | 4.2:+9726032 | None:intergenic |
| TTTATGTCTATATCAAAATC+TGG | 0.362952 | 4.2:+9725781 | None:intergenic |
| GCCATTAATTAGTTGCTGTT+TGG | 0.366457 | 4.2:-9730425 | MS.gene58131:intron |
| TCCCTTTCTGGGTCTGCCTC+AGG | 0.382400 | 4.2:+9729992 | None:intergenic |
| CAGTTCTCTGATCCCTTTCT+GGG | 0.389571 | 4.2:+9729981 | None:intergenic |
| AATGGGAAATTGGAGATTGC+TGG | 0.395405 | 4.2:-9727101 | MS.gene58131:CDS |
| AGCATTGCTTATGCAAAGAT+TGG | 0.405628 | 4.2:-9726178 | MS.gene58131:CDS |
| ATTCCTACTGGTTCTGCCAC+AGG | 0.409863 | 4.2:+9725948 | None:intergenic |
| CCAATGGCAATTGCGCTCTC+TGG | 0.422721 | 4.2:-9727791 | MS.gene58131:CDS |
| GATTGCTGGCAGGACTATAA+AGG | 0.425387 | 4.2:-9727087 | MS.gene58131:intron |
| TTTCTGTCCACTGCTCCATA+TGG | 0.427406 | 4.2:+9727671 | None:intergenic |
| GTTGATCACAGCTATCTTCA+TGG | 0.448889 | 4.2:-9725484 | MS.gene58131:intron |
| TACAGATCATGTTGGAAGTC+AGG | 0.450670 | 4.2:-9726961 | MS.gene58131:CDS |
| CCAGAGAGCGCAATTGCCAT+TGG | 0.454319 | 4.2:+9727791 | None:intergenic |
| CTTCGACGAATACGAGTACT+TGG | 0.454962 | 4.2:-9731850 | MS.gene58131:CDS |
| GAAGACGGTGGAGGAGCAAC+CGG | 0.456880 | 4.2:-9731826 | MS.gene58131:CDS |
| CTTGACTTGCAGGAGATTCA+GGG | 0.457008 | 4.2:-9730035 | MS.gene58131:intron |
| ATCTCGACGGCGGCGAAGAT+AGG | 0.458271 | 4.2:-9731716 | MS.gene58131:CDS |
| TTAAATCCGAGAGGACTTAC+CGG | 0.460777 | 4.2:-9731758 | MS.gene58131:CDS |
| TCCTACTACAACAGCTCCAC+TGG | 0.462492 | 4.2:+9727694 | None:intergenic |
| CTTCAATAATAAACACTCGC+TGG | 0.462607 | 4.2:+9725923 | None:intergenic |
| ACTTCTCGGGCAACCTGTAA+TGG | 0.467311 | 4.2:-9727762 | MS.gene58131:CDS |
| ATTGGTGTGCCAACTGTGAA+TGG | 0.468260 | 4.2:-9726062 | MS.gene58131:CDS |
| TCAAGACGATCTAAAGGAGT+TGG | 0.473620 | 4.2:-9729433 | MS.gene58131:CDS |
| TCATCACAAACCTCGGTGCT+TGG | 0.475999 | 4.2:+9725888 | None:intergenic |
| TGAGCCATTTGGTCAGATTG+AGG | 0.478316 | 4.2:-9727306 | MS.gene58131:CDS |
| ACTGGTTCTGCCACAGGGGT+AGG | 0.482776 | 4.2:+9725954 | None:intergenic |
| TGGGTCGGTTCCTGTTCAGC+AGG | 0.500444 | 4.2:-9726042 | MS.gene58131:CDS |
| TATGAGTTCTTCTCGAAAGC+TGG | 0.501029 | 4.2:-9729794 | MS.gene58131:CDS |
| CTGCCTTTGCATGTTCAAGA+TGG | 0.501167 | 4.2:+9727135 | None:intergenic |
| GAGAGATGTCCGTCTGATCA+TGG | 0.501655 | 4.2:-9729464 | MS.gene58131:CDS |
| ACAACCTCAATCTGACCAAA+TGG | 0.502025 | 4.2:+9727302 | None:intergenic |
| AAGATCGTTCACGGTGTTCA+CGG | 0.502710 | 4.2:+9731613 | None:intergenic |
| GGTGTTCACGGTCACGTTCA+CGG | 0.504600 | 4.2:+9731625 | None:intergenic |
| TTGCTTATGCAAAGATTGGC+TGG | 0.505604 | 4.2:-9726174 | MS.gene58131:CDS |
| CAGGTTGCCCGAGAAGTAGT+TGG | 0.506510 | 4.2:+9727768 | None:intergenic |
| CACTCGCTGGGAATTCCTAC+TGG | 0.508916 | 4.2:+9725936 | None:intergenic |
| GCTGTTGTAGTAGGACCATA+TGG | 0.509161 | 4.2:-9727686 | MS.gene58131:CDS |
| GTGCTTCCGGTAAGTCCTCT+CGG | 0.509691 | 4.2:+9731752 | None:intergenic |
| CAAGACGATCTAAAGGAGTT+GGG | 0.512572 | 4.2:-9729432 | MS.gene58131:intron |
| AGACATAAAAGAGGATGTAG+AGG | 0.512949 | 4.2:-9725767 | MS.gene58131:CDS |
| GAGGAAGAGTGTTCTAAATA+CGG | 0.513774 | 4.2:-9725748 | MS.gene58131:CDS |
| TCCAGTGGAGCTGTTGTAGT+AGG | 0.514605 | 4.2:-9727695 | MS.gene58131:CDS |
| TCTCTGGCCAACTACTTCTC+GGG | 0.517772 | 4.2:-9727775 | MS.gene58131:CDS |
| CGACGAGAATGGCTCTAAGA+AGG | 0.519514 | 4.2:-9731667 | MS.gene58131:CDS |
| CTTCCTCTTGACATGGAGAC+GGG | 0.525930 | 4.2:-9727275 | MS.gene58131:CDS |
| TTCAATAATAAACACTCGCT+GGG | 0.527139 | 4.2:+9725924 | None:intergenic |
| TGCCTTTGCATGTTCAAGAT+GGG | 0.529504 | 4.2:+9727136 | None:intergenic |
| AAGAGTGTTCTAAATACGGC+CGG | 0.531925 | 4.2:-9725744 | MS.gene58131:CDS |
| TGATGATGATGAAGGAGGAT+TGG | 0.532759 | 4.2:-9726913 | MS.gene58131:intron |
| AACCTGAGGCAGACCCAGAA+AGG | 0.536328 | 4.2:-9729994 | MS.gene58131:CDS |
| TTCCTACTGGTTCTGCCACA+GGG | 0.541031 | 4.2:+9725949 | None:intergenic |
| AGGCAGCTCAGAGTTTAAAT+GGG | 0.544244 | 4.2:-9727118 | MS.gene58131:CDS |
| AGGAACTCAAGACGATCTAA+AGG | 0.546738 | 4.2:-9729439 | MS.gene58131:CDS |
| CTCTAAGAAGGATCGCGATA+GGG | 0.547806 | 4.2:-9731655 | MS.gene58131:CDS |
| CGCGGCGGAGACGACGAGAA+TGG | 0.548162 | 4.2:-9731678 | MS.gene58131:CDS |
| TGCCCATCTTGAACATGCAA+AGG | 0.550622 | 4.2:-9727138 | MS.gene58131:CDS |
| GCTCTAAGAAGGATCGCGAT+AGG | 0.550790 | 4.2:-9731656 | MS.gene58131:CDS |
| ATAACACCTGGATTGCCAAA+AGG | 0.551187 | 4.2:+9726008 | None:intergenic |
| GGAAATTGGAGATTGCTGGC+AGG | 0.559200 | 4.2:-9727097 | MS.gene58131:CDS |
| ACCTGAGGCAGACCCAGAAA+GGG | 0.563699 | 4.2:-9729993 | MS.gene58131:CDS |
| CATAAGCAATGCTCTTGAGT+GGG | 0.567427 | 4.2:+9726188 | None:intergenic |
| GGGGTAGGCATGACTTGTGT+TGG | 0.567564 | 4.2:+9725969 | None:intergenic |
| AGTGGACAGAAAATTGTATG+TGG | 0.570567 | 4.2:-9727660 | MS.gene58131:CDS |
| CAGGGATAAGAAAGAGAATG+TGG | 0.571250 | 4.2:-9730017 | MS.gene58131:CDS |
| CATGGAGACGGGACACTGCA+AGG | 0.573578 | 4.2:-9727264 | MS.gene58131:CDS |
| GTGGACAGAAAATTGTATGT+GGG | 0.575032 | 4.2:-9727659 | MS.gene58131:CDS |
| GCATAAGCAATGCTCTTGAG+TGG | 0.577589 | 4.2:+9726187 | None:intergenic |
| AAATATCGTACAGACCTTGT+GGG | 0.582490 | 4.2:+9726141 | None:intergenic |
| GTTCTTCTCGAAAGCTGGCA+AGG | 0.584609 | 4.2:-9729789 | MS.gene58131:intron |
| AACGAGCAATGCACATGAGA+TGG | 0.585575 | 4.2:-9725518 | MS.gene58131:CDS |
| GCCGCCGTCGAGATCGTCGT+CGG | 0.592650 | 4.2:+9731725 | None:intergenic |
| AATTTGGCTTCATATAAATG+TGG | 0.592878 | 4.2:+9725202 | None:intergenic |
| TTGGTGTGCCAACTGTGAAT+GGG | 0.595348 | 4.2:-9726061 | MS.gene58131:CDS |
| TCGACGGCGGCGAAGATAGG+CGG | 0.595350 | 4.2:-9731713 | MS.gene58131:CDS |
| TGATGCGATGTCAGTGCCAA+TGG | 0.595501 | 4.2:-9727807 | MS.gene58131:CDS |
| TGTGTACACAGAAGAAGTGC+AGG | 0.600350 | 4.2:-9725588 | MS.gene58131:intron |
| GGAGGAGCAACCGGAAGACA+AGG | 0.602697 | 4.2:-9731817 | MS.gene58131:CDS |
| ACTTCCTCTTGACATGGAGA+CGG | 0.607732 | 4.2:-9727276 | MS.gene58131:CDS |
| TCATCTGTTACAGATCATGT+TGG | 0.607952 | 4.2:-9726969 | MS.gene58131:CDS |
| GAAAGAGAATGTGGAACCTG+AGG | 0.611571 | 4.2:-9730008 | MS.gene58131:CDS |
| TGTACAACTTCCTCTTGACA+TGG | 0.615489 | 4.2:-9727282 | MS.gene58131:CDS |
| GCGAAGATAGGCGGAGCAAG+AGG | 0.616111 | 4.2:-9731704 | MS.gene58131:CDS |
| GAGAGGACTTACCGGAAGCA+CGG | 0.616261 | 4.2:-9731750 | MS.gene58131:CDS |
| GTTCAATCTAATGCTTCCAG+TGG | 0.619478 | 4.2:-9727710 | MS.gene58131:CDS |
| ATGGAGACGGGACACTGCAA+GGG | 0.619950 | 4.2:-9727263 | MS.gene58131:CDS |
| GTACTTGGAGAAGACGGTGG+AGG | 0.620385 | 4.2:-9731835 | MS.gene58131:CDS |
| ACTGACGCGGGTATAACACC+TGG | 0.622167 | 4.2:+9725996 | None:intergenic |
| CGACATAAATATGCAACACC+CGG | 0.623634 | 4.2:+9725725 | None:intergenic |
| ATGTCCGTCTGATCATGGAT+AGG | 0.625620 | 4.2:-9729459 | MS.gene58131:CDS |
| ACAGATGCCGTTAAAAGCAA+CGG | 0.627705 | 4.2:-9729828 | MS.gene58131:intron |
| GCAGACTTTGATGATGATGA+AGG | 0.629623 | 4.2:-9726921 | MS.gene58131:CDS |
| ACATGAGATGGTTTGCACGC+AGG | 0.634613 | 4.2:-9725506 | MS.gene58131:CDS |
| GGAACCGACCCATTCACAGT+TGG | 0.635458 | 4.2:+9726053 | None:intergenic |
| AGTTCCTATCCATGATCAGA+CGG | 0.636518 | 4.2:+9729455 | None:intergenic |
| TGGACAGAAAATTGTATGTG+GGG | 0.636625 | 4.2:-9727658 | MS.gene58131:CDS |
| AGAGTGTTCTAAATACGGCC+GGG | 0.637402 | 4.2:-9725743 | MS.gene58131:CDS |
| TGTCCCGTCTCCATGTCAAG+AGG | 0.648903 | 4.2:+9727272 | None:intergenic |
| AGGCAACCAACCAACCTGGT+AGG | 0.658360 | 4.2:+9729952 | None:intergenic |
| AGGCGGAGCAAGAGGTCACG+CGG | 0.658613 | 4.2:-9731696 | MS.gene58131:CDS |
| AGTCCTCTCGGATTTAATGT+CGG | 0.659142 | 4.2:+9731764 | None:intergenic |
| GACTTTGATGATGATGAAGG+AGG | 0.661760 | 4.2:-9726918 | MS.gene58131:CDS |
| GTACTTGCAGTTTGAAACAG+TGG | 0.665993 | 4.2:-9725559 | MS.gene58131:CDS |
| ATACGAGTACTTGGAGAAGA+CGG | 0.666924 | 4.2:-9731841 | MS.gene58131:CDS |
| GGCGCCGACGACGATCTCGA+CGG | 0.667091 | 4.2:-9731729 | MS.gene58131:CDS |
| GCCGACGACGATCTCGACGG+CGG | 0.668056 | 4.2:-9731726 | MS.gene58131:CDS |
| AGTAGGACCATATGGAGCAG+TGG | 0.670759 | 4.2:-9727678 | MS.gene58131:CDS |
| CTGGTACTGACATTCCCACA+AGG | 0.673381 | 4.2:-9726155 | MS.gene58131:intron |
| ACCCCTGTGGCAGAACCAGT+AGG | 0.679311 | 4.2:-9725951 | MS.gene58131:CDS |
| TGTGCCAACTGTGAATGGGT+CGG | 0.685971 | 4.2:-9726057 | MS.gene58131:CDS |
| TCCTACTGGTTCTGCCACAG+GGG | 0.691418 | 4.2:+9725950 | None:intergenic |
| TCTTCACTTCAACATGACTG+AGG | 0.697877 | 4.2:-9727633 | MS.gene58131:CDS |
| CGAGTACTTGGAGAAGACGG+TGG | 0.704167 | 4.2:-9731838 | MS.gene58131:CDS |
| ACAAGTCATGCCTACCCCTG+TGG | 0.707457 | 4.2:-9725964 | MS.gene58131:CDS |
| GACTGAGGCTAATCTCCGAG+AGG | 0.707679 | 4.2:-9727618 | MS.gene58131:intron |
| TTGTGTTGGTAGAACTGACG+CGG | 0.710439 | 4.2:+9725983 | None:intergenic |
| TGTAATGGTGAAACCCTCTG+AGG | 0.719486 | 4.2:-9727747 | MS.gene58131:CDS |
| CGGAGCAAGAGGTCACGCGG+CGG | 0.728879 | 4.2:-9731693 | MS.gene58131:CDS |
| TATGTTTGATCCAAGCACCG+AGG | 0.738501 | 4.2:-9725898 | MS.gene58131:intron |
| TGTGTTGGTAGAACTGACGC+GGG | 0.742830 | 4.2:+9725984 | None:intergenic |
| TCACCGACATTAAATCCGAG+AGG | 0.753568 | 4.2:-9731767 | MS.gene58131:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAAAGTTTAATGTAT+TGG | - | chr4.2:9725844-9725863 | MS.gene58131:intron | 10.0% |
| !! | TACTTAAAATATTAGAAAAT+TGG | - | chr4.2:9730166-9730185 | MS.gene58131:intron | 10.0% |
| !!! | TTTTTTTTTGTTTTTTTAAG+AGG | + | chr4.2:9728593-9728612 | None:intergenic | 10.0% |
| !! | AATAAATAAAAGGTTAAAAG+TGG | + | chr4.2:9728512-9728531 | None:intergenic | 15.0% |
| !! | AATATATTTAGTCAAACTAT+AGG | + | chr4.2:9729601-9729620 | None:intergenic | 15.0% |
| !! | AATTATACTTTAAACAAAAG+AGG | + | chr4.2:9727536-9727555 | None:intergenic | 15.0% |
| !! | ATTATACTTTAAACAAAAGA+GGG | + | chr4.2:9727535-9727554 | None:intergenic | 15.0% |
| !! | ATTGTTGAATTTAATAAAGA+GGG | + | chr4.2:9731752-9731771 | None:intergenic | 15.0% |
| !! | CAAATTTACTAAAGTTTATA+CGG | - | chr4.2:9730240-9730259 | MS.gene58131:intron | 15.0% |
| !! | TAAATATAAAATGACCTAAA+AGG | + | chr4.2:9728928-9728947 | None:intergenic | 15.0% |
| !! | TATATGATATTAGAACATTA+TGG | - | chr4.2:9726356-9726375 | MS.gene58131:intron | 15.0% |
| !! | TATTATATGAATTAAGAGTA+AGG | + | chr4.2:9728687-9728706 | None:intergenic | 15.0% |
| !! | TCAACAAAATTTAAACAAAA+AGG | + | chr4.2:9729998-9730017 | None:intergenic | 15.0% |
| !!! | AAACATTTATTTTGTTGTTT+CGG | + | chr4.2:9730523-9730542 | None:intergenic | 15.0% |
| !!! | AACAACAAAATAAATGTTTT+TGG | - | chr4.2:9730524-9730543 | MS.gene58131:intron | 15.0% |
| !!! | AACATTTTATCAAACAAAAT+AGG | + | chr4.2:9730470-9730489 | None:intergenic | 15.0% |
| !!! | CTATTTAAAACAAACAAAAA+TGG | + | chr4.2:9727115-9727134 | None:intergenic | 15.0% |
| !!! | TAAAATTGTTTTCTTTAAAC+TGG | - | chr4.2:9729635-9729654 | MS.gene58131:intron | 15.0% |
| !!! | TTCATTAATTTGTTGTTATT+GGG | - | chr4.2:9726759-9726778 | MS.gene58131:intron | 15.0% |
| !!! | TTGCAATTTTTTAATTAGTT+CGG | - | chr4.2:9731430-9731449 | MS.gene58131:intron | 15.0% |
| !!! | TTTCATTAATTTGTTGTTAT+TGG | - | chr4.2:9726758-9726777 | MS.gene58131:intron | 15.0% |
| !!! | TTTTGTTCTTATAAAATAAG+AGG | - | chr4.2:9726564-9726583 | MS.gene58131:intron | 15.0% |
| !! | AAAAAAATTGCATATAACAC+TGG | + | chr4.2:9726545-9726564 | None:intergenic | 20.0% |
| !! | AAATATTAGAAAATTGGTTG+TGG | - | chr4.2:9730172-9730191 | MS.gene58131:intron | 20.0% |
| !! | AGGTATAAGTATATCATTAA+TGG | - | chr4.2:9726651-9726670 | MS.gene58131:intron | 20.0% |
| !! | AGGTTACATGTAAATATATA+AGG | - | chr4.2:9730443-9730462 | MS.gene58131:intron | 20.0% |
| !! | ATTAGTATTACGTAGTTATT+GGG | - | chr4.2:9725886-9725905 | MS.gene58131:intron | 20.0% |
| !! | ATTGTATGCATGAAAAAAAT+GGG | + | chr4.2:9727859-9727878 | None:intergenic | 20.0% |
| !! | GATTGTTGAATTTAATAAAG+AGG | + | chr4.2:9731753-9731772 | None:intergenic | 20.0% |
| !! | GGTTACATGTAAATATATAA+GGG | - | chr4.2:9730444-9730463 | MS.gene58131:intron | 20.0% |
| !! | TATTAGTATTACGTAGTTAT+TGG | - | chr4.2:9725885-9725904 | MS.gene58131:intron | 20.0% |
| !! | TTATACTTTAAACAAAAGAG+GGG | + | chr4.2:9727534-9727553 | None:intergenic | 20.0% |
| !! | TTCTAGATATGAAATTATAC+AGG | - | chr4.2:9730349-9730368 | MS.gene58131:intron | 20.0% |
| !! | TTTATATGAAGCCAAATTTA+AGG | - | chr4.2:9731844-9731863 | MS.gene58131:CDS | 20.0% |
| !! | TTTATGTCTATATCAAAATC+TGG | + | chr4.2:9731263-9731282 | None:intergenic | 20.0% |
| !!! | AAAGGTAAAAATATTTTTGC+TGG | - | chr4.2:9729972-9729991 | MS.gene58131:CDS | 20.0% |
| !!! | AGATTGAACAAGATTTTTTT+CGG | + | chr4.2:9729320-9729339 | None:intergenic | 20.0% |
| !!! | TTTAAAACAAACAAAAATGG+AGG | + | chr4.2:9727112-9727131 | None:intergenic | 20.0% |
| !!! | TTTTGATATAGACATAAAAG+AGG | - | chr4.2:9731265-9731284 | MS.gene58131:intron | 20.0% |
| ! | AAATTGCAACACATAATATG+TGG | + | chr4.2:9731419-9731438 | None:intergenic | 25.0% |
| ! | AACAATAGTACTCATCTATT+GGG | - | chr4.2:9730738-9730757 | MS.gene58131:intron | 25.0% |
| ! | AAGATATTGATCTAGAGAAA+AGG | + | chr4.2:9731795-9731814 | None:intergenic | 25.0% |
| ! | AATATGTGAAAACAATGAAC+AGG | + | chr4.2:9730946-9730965 | None:intergenic | 25.0% |
| ! | AGGATACATGATGATTAATT+CGG | + | chr4.2:9731367-9731386 | None:intergenic | 25.0% |
| ! | ATCTCTAGATCATTCTTAAT+CGG | + | chr4.2:9726313-9726332 | None:intergenic | 25.0% |
| ! | ATTTCTAATTCAATCATGTC+TGG | + | chr4.2:9725994-9726013 | None:intergenic | 25.0% |
| ! | CAGGTTCATAAAAATATAAG+AGG | + | chr4.2:9730927-9730946 | None:intergenic | 25.0% |
| ! | CATTGTATGCATGAAAAAAA+TGG | + | chr4.2:9727860-9727879 | None:intergenic | 25.0% |
| ! | GACTTACAATTCATAAAAGA+AGG | + | chr4.2:9727951-9727970 | None:intergenic | 25.0% |
| ! | GCAATATTTCTTAAGGTTAA+AGG | + | chr4.2:9729832-9729851 | None:intergenic | 25.0% |
| ! | GTGAAAAGCAATATTTCTTA+AGG | + | chr4.2:9729839-9729858 | None:intergenic | 25.0% |
| ! | TAACAATAGTACTCATCTAT+TGG | - | chr4.2:9730737-9730756 | MS.gene58131:intron | 25.0% |
| ! | TATCACAACAAGATTCTAAT+CGG | + | chr4.2:9729671-9729690 | None:intergenic | 25.0% |
| ! | TATTTCTTAAGGTTAAAGGT+TGG | + | chr4.2:9729828-9729847 | None:intergenic | 25.0% |
| ! | TCATAAAAGAAGGAAAAGAT+GGG | + | chr4.2:9727941-9727960 | None:intergenic | 25.0% |
| ! | TTCATAAAAGAAGGAAAAGA+TGG | + | chr4.2:9727942-9727961 | None:intergenic | 25.0% |
| ! | TTGAATTTAATAAAGAGGGA+CGG | + | chr4.2:9731748-9731767 | None:intergenic | 25.0% |
| ! | TTGATTGCATATATTTGTAG+AGG | + | chr4.2:9730555-9730574 | None:intergenic | 25.0% |
| !! | AATTTGGCTTCATATAAATG+TGG | + | chr4.2:9731842-9731861 | None:intergenic | 25.0% |
| !! | ATTGTTTTCTTTAAACTGGT+AGG | - | chr4.2:9729639-9729658 | MS.gene58131:intron | 25.0% |
| !! | TAAAATTTTGCTAATGCACT+AGG | + | chr4.2:9728059-9728078 | None:intergenic | 25.0% |
| !! | TAAACTTGCTTCACTATTTA+TGG | + | chr4.2:9728731-9728750 | None:intergenic | 25.0% |
| !! | TTAAACAAACATGTCCTTTT+AGG | - | chr4.2:9728911-9728930 | MS.gene58131:intron | 25.0% |
| !! | TTTATGAAGTTTTTCTGTGT+TGG | - | chr4.2:9726486-9726505 | MS.gene58131:intron | 25.0% |
| !!! | ACATTAGTTTTTCTTCTGTA+CGG | - | chr4.2:9730788-9730807 | MS.gene58131:intron | 25.0% |
| !!! | TCACTTTAACTTGTATTCAT+TGG | - | chr4.2:9729874-9729893 | MS.gene58131:intron | 25.0% |
| !!! | TGCTCTATTGATTTTTCAAT+TGG | - | chr4.2:9725779-9725798 | MS.gene58131:CDS | 25.0% |
| !!! | TTTTAGATTTTTGAGCCATT+TGG | - | chr4.2:9729724-9729743 | MS.gene58131:intron | 25.0% |
| AAAAACAAAGCCAACAGAAA+AGG | + | chr4.2:9730708-9730727 | None:intergenic | 30.0% | |
| AAAACAAAGCCAACAGAAAA+GGG | + | chr4.2:9730707-9730726 | None:intergenic | 30.0% | |
| AACACATCAGAATGATAATC+TGG | + | chr4.2:9731723-9731742 | None:intergenic | 30.0% | |
| AAGCTGAGTTTCATTATGTA+AGG | + | chr4.2:9728285-9728304 | None:intergenic | 30.0% | |
| AATATTCTTGAGTTCTCTGT+TGG | - | chr4.2:9731589-9731608 | MS.gene58131:intron | 30.0% | |
| AATCAATTCATCACAAACCT+CGG | + | chr4.2:9731163-9731182 | None:intergenic | 30.0% | |
| AATGCCTATTGTAGAAAAGA+TGG | - | chr4.2:9726038-9726057 | MS.gene58131:CDS | 30.0% | |
| ACAATAGTACTCATCTATTG+GGG | - | chr4.2:9730739-9730758 | MS.gene58131:intron | 30.0% | |
| ACCAAACAGCAACTAATTAA+TGG | + | chr4.2:9726620-9726639 | None:intergenic | 30.0% | |
| ACTCTGCTTTCAGTTAAATA+GGG | - | chr4.2:9727360-9727379 | MS.gene58131:intron | 30.0% | |
| AGAGCAAACATGAAATGAAA+AGG | + | chr4.2:9725765-9725784 | None:intergenic | 30.0% | |
| AGAGTAAAATAAGAGATGCA+GGG | - | chr4.2:9725940-9725959 | MS.gene58131:CDS | 30.0% | |
| AGTGTTCATGTTTGATAGAT+AGG | - | chr4.2:9730383-9730402 | MS.gene58131:intron | 30.0% | |
| ATGACAATATTAGAGAGAGT+TGG | - | chr4.2:9726012-9726031 | MS.gene58131:CDS | 30.0% | |
| CAAATTCAACTAGTATGACA+TGG | - | chr4.2:9726947-9726966 | MS.gene58131:CDS | 30.0% | |
| CACACATATATATACACACA+CGG | + | chr4.2:9729531-9729550 | None:intergenic | 30.0% | |
| CATAAAAGAAGGAAAAGATG+GGG | + | chr4.2:9727940-9727959 | None:intergenic | 30.0% | |
| CATGTCATACTAGTTGAATT+TGG | + | chr4.2:9726949-9726968 | None:intergenic | 30.0% | |
| GATCTTGGAAAGAAAAACTA+AGG | + | chr4.2:9730656-9730675 | None:intergenic | 30.0% | |
| GCATTCAGCAATAGTATATA+TGG | - | chr4.2:9728630-9728649 | MS.gene58131:intron | 30.0% | |
| GGATACATGATGATTAATTC+GGG | + | chr4.2:9731366-9731385 | None:intergenic | 30.0% | |
| GTAGTGTGATTAATCATACA+TGG | + | chr4.2:9731694-9731713 | None:intergenic | 30.0% | |
| GTGAGTATGTTAATTGTTCT+GGG | + | chr4.2:9726211-9726230 | None:intergenic | 30.0% | |
| TCAAGATTCGTCCTTAAATT+TGG | + | chr4.2:9731858-9731877 | None:intergenic | 30.0% | |
| TCAGAGTTTAAATGGGAAAT+TGG | - | chr4.2:9729930-9729949 | MS.gene58131:intron | 30.0% | |
| TGACAATATTAGAGAGAGTT+GGG | - | chr4.2:9726013-9726032 | MS.gene58131:CDS | 30.0% | |
| TGATCTAGAGATTAATGAGT+TGG | - | chr4.2:9726321-9726340 | MS.gene58131:intron | 30.0% | |
| TGCATGAAAAAAATGGGAAT+AGG | + | chr4.2:9727853-9727872 | None:intergenic | 30.0% | |
| TGCTTGACTGTATTCTTAAT+TGG | - | chr4.2:9727716-9727735 | MS.gene58131:CDS | 30.0% | |
| TGGAAACTGATAACATGAAA+AGG | + | chr4.2:9731399-9731418 | None:intergenic | 30.0% | |
| TGTGAGTATGTTAATTGTTC+TGG | + | chr4.2:9726212-9726231 | None:intergenic | 30.0% | |
| TTCAATAATAAACACTCGCT+GGG | + | chr4.2:9731120-9731139 | None:intergenic | 30.0% | |
| TTGAAATGTGATGCTAAACT+AGG | - | chr4.2:9726587-9726606 | MS.gene58131:intron | 30.0% | |
| ! | ACAAAAAAGAGTATGTCTGA+TGG | - | chr4.2:9726246-9726265 | MS.gene58131:intron | 30.0% |
| ! | AGAGATTAATGAGTTGGATA+GGG | - | chr4.2:9726327-9726346 | MS.gene58131:intron | 30.0% |
| ! | AGTGAGCTAATTAAAGCATT+AGG | + | chr4.2:9727785-9727804 | None:intergenic | 30.0% |
| ! | ATTTATACGGTCTGAGATAT+TGG | - | chr4.2:9727140-9727159 | MS.gene58131:CDS | 30.0% |
| ! | ATTTGATGTTCCATGTTTTC+AGG | - | chr4.2:9727553-9727572 | MS.gene58131:intron | 30.0% |
| ! | GTGAGCTAATTAAAGCATTA+GGG | + | chr4.2:9727784-9727803 | None:intergenic | 30.0% |
| ! | TAGAGATTAATGAGTTGGAT+AGG | - | chr4.2:9726326-9726345 | MS.gene58131:intron | 30.0% |
| ! | TCGTTATCTGAAACATCATA+TGG | + | chr4.2:9731204-9731223 | None:intergenic | 30.0% |
| ! | TCTACCATCTTTTCTACAAT+AGG | + | chr4.2:9726045-9726064 | None:intergenic | 30.0% |
| ! | TCTGAAACATCATATGGTTA+TGG | + | chr4.2:9731198-9731217 | None:intergenic | 30.0% |
| !! | TAATCTGGGTTGATCTAAAA+AGG | - | chr4.2:9726727-9726746 | MS.gene58131:intron | 30.0% |
| !!! | AGCTTATAAGCTTGTTTTGA+TGG | - | chr4.2:9728385-9728404 | MS.gene58131:intron | 30.0% |
| AAAATATCGTACAGACCTTG+TGG | + | chr4.2:9730904-9730923 | None:intergenic | 35.0% | |
| AAATATCGTACAGACCTTGT+GGG | + | chr4.2:9730903-9730922 | None:intergenic | 35.0% | |
| AAATGGGAATAGGACTGAAA+AGG | + | chr4.2:9727843-9727862 | None:intergenic | 35.0% | |
| AACAACAACCAATCCTAAGT+AGG | + | chr4.2:9726406-9726425 | None:intergenic | 35.0% | |
| ACAACAACCAATCCTAAGTA+GGG | + | chr4.2:9726405-9726424 | None:intergenic | 35.0% | |
| ACACTGGCAACATAAACAAT+AGG | + | chr4.2:9726529-9726548 | None:intergenic | 35.0% | |
| ACCATTTAGACAAGAAGGAT+TGG | + | chr4.2:9728153-9728172 | None:intergenic | 35.0% | |
| ACTTTCATTTGACCAGTAGT+GGG | - | chr4.2:9728019-9728038 | MS.gene58131:intron | 35.0% | |
| AGAATACAGCAAAGAGATGT+AGG | + | chr4.2:9729130-9729149 | None:intergenic | 35.0% | |
| AGACATAAAAGAGGATGTAG+AGG | - | chr4.2:9731274-9731293 | MS.gene58131:intron | 35.0% | |
| AGCATTGCTTATGCAAAGAT+TGG | - | chr4.2:9730863-9730882 | MS.gene58131:intron | 35.0% | |
| AGGTTTGATGCTCATGAATT+TGG | - | chr4.2:9727987-9728006 | MS.gene58131:intron | 35.0% | |
| AGTGGACAGAAAATTGTATG+TGG | - | chr4.2:9729381-9729400 | MS.gene58131:intron | 35.0% | |
| ATAAGGAAAGGGAAAAGGAA+CGG | - | chr4.2:9725577-9725596 | MS.gene58131:CDS | 35.0% | |
| ATACATTGATATCCTCACCA+CGG | + | chr4.2:9729499-9729518 | None:intergenic | 35.0% | |
| ATGATTTCCTGTTTGCTCTT+TGG | - | chr4.2:9727185-9727204 | MS.gene58131:intron | 35.0% | |
| CACTCTGCTTTCAGTTAAAT+AGG | - | chr4.2:9727359-9727378 | MS.gene58131:intron | 35.0% | |
| CACTGGCAACATAAACAATA+GGG | + | chr4.2:9726528-9726547 | None:intergenic | 35.0% | |
| CTGCAAGTCAAGTTAAAATG+AGG | + | chr4.2:9726998-9727017 | None:intergenic | 35.0% | |
| CTTCAATAATAAACACTCGC+TGG | + | chr4.2:9731121-9731140 | None:intergenic | 35.0% | |
| GAATACAGCAAAGAGATGTA+GGG | + | chr4.2:9729129-9729148 | None:intergenic | 35.0% | |
| GACAATATTAGAGAGAGTTG+GGG | - | chr4.2:9726014-9726033 | MS.gene58131:CDS | 35.0% | |
| GAGAGTAAAATAAGAGATGC+AGG | - | chr4.2:9725939-9725958 | MS.gene58131:CDS | 35.0% | |
| GATAAAATTAGCTGCTGAAG+TGG | + | chr4.2:9728955-9728974 | None:intergenic | 35.0% | |
| GTATTACGTAGTTATTGGGA+TGG | - | chr4.2:9725890-9725909 | MS.gene58131:intron | 35.0% | |
| GTCCATATTAGAGTCCAAAT+TGG | + | chr4.2:9726883-9726902 | None:intergenic | 35.0% | |
| GTGGACAGAAAATTGTATGT+GGG | - | chr4.2:9729382-9729401 | MS.gene58131:intron | 35.0% | |
| TCATCTGTTACAGATCATGT+TGG | - | chr4.2:9730072-9730091 | MS.gene58131:intron | 35.0% | |
| TGAGCGGTTATATTAGAAAG+TGG | + | chr4.2:9728566-9728585 | None:intergenic | 35.0% | |
| TGGACAGAAAATTGTATGTG+GGG | - | chr4.2:9729383-9729402 | MS.gene58131:intron | 35.0% | |
| TTCGTATGAGTACAGAGATA+CGG | + | chr4.2:9728177-9728196 | None:intergenic | 35.0% | |
| TTGATGGAATGTGATGTGTT+TGG | - | chr4.2:9728401-9728420 | MS.gene58131:intron | 35.0% | |
| ! | AAAAGCTAGCTTATAGCTGA+TGG | + | chr4.2:9729033-9729052 | None:intergenic | 35.0% |
| ! | AAAGCTAGCTTATAGCTTGT+TGG | - | chr4.2:9728359-9728378 | MS.gene58131:intron | 35.0% |
| ! | AGTTTTTCTGTGTTGGAATG+TGG | - | chr4.2:9726493-9726512 | MS.gene58131:intron | 35.0% |
| ! | ATGAGAATTTTGTGGATGTG+TGG | - | chr4.2:9725963-9725982 | MS.gene58131:CDS | 35.0% |
| ! | CAGAATGATAATCTGGTTCA+TGG | + | chr4.2:9731716-9731735 | None:intergenic | 35.0% |
| ! | CTGTTTGGTTCAATTCTTCA+AGG | - | chr4.2:9726631-9726650 | MS.gene58131:intron | 35.0% |
| ! | GATGTCAGTGTTCTTCTTTT+TGG | + | chr4.2:9725256-9725275 | None:intergenic | 35.0% |
| ! | GCCATTAATTAGTTGCTGTT+TGG | - | chr4.2:9726616-9726635 | MS.gene58131:intron | 35.0% |
| ! | TATGATCCTTACTGCAGTTT+TGG | - | chr4.2:9726807-9726826 | MS.gene58131:intron | 35.0% |
| ! | TTGAAATTTCAGTGCTGTTG+AGG | - | chr4.2:9730410-9730429 | MS.gene58131:intron | 35.0% |
| !! | CTAGAGTTTTTGTTTCCCTA+CGG | - | chr4.2:9728317-9728336 | MS.gene58131:intron | 35.0% |
| !! | GAGGAAGAGTGTTCTAAATA+CGG | - | chr4.2:9731293-9731312 | MS.gene58131:intron | 35.0% |
| !! | GGGAAGTTATTGTTTGTTGT+TGG | - | chr4.2:9730759-9730778 | MS.gene58131:intron | 35.0% |
| !!! | CTCATTTTAACTTGACTTGC+AGG | - | chr4.2:9726996-9727015 | MS.gene58131:intron | 35.0% |
| !!! | TTTTTTAAGAGGAACGTGAG+CGG | + | chr4.2:9728582-9728601 | None:intergenic | 35.0% |
| AAAAGAAGGAAAAGATGGGG+TGG | + | chr4.2:9727937-9727956 | None:intergenic | 40.0% | |
| AAACACGCACAAATACCTCT+CGG | + | chr4.2:9729441-9729460 | None:intergenic | 40.0% | |
| AAAGAGATGTAGGGTGTGTT+TGG | + | chr4.2:9729120-9729139 | None:intergenic | 40.0% | |
| AACCTGAATTTGACGAACGT+CGG | + | chr4.2:9730052-9730071 | None:intergenic | 40.0% | |
| AAGAAGAGTAGATCAGATGC+AGG | - | chr4.2:9726123-9726142 | MS.gene58131:intron | 40.0% | |
| AAGAGATAAGGAGAGAGAGA+AGG | - | chr4.2:9725605-9725624 | MS.gene58131:intron | 40.0% | |
| AAGGCAGCTCAGAGTTTAAA+TGG | - | chr4.2:9729922-9729941 | MS.gene58131:intron | 40.0% | |
| AAGGTTTGCAGCATAACATC+AGG | + | chr4.2:9731776-9731795 | None:intergenic | 40.0% | |
| AATGGGAAATTGGAGATTGC+TGG | - | chr4.2:9729940-9729959 | MS.gene58131:intron | 40.0% | |
| ACAACCTCAATCTGACCAAA+TGG | + | chr4.2:9729742-9729761 | None:intergenic | 40.0% | |
| ACAGATGCCGTTAAAAGCAA+CGG | - | chr4.2:9727213-9727232 | MS.gene58131:intron | 40.0% | |
| ACATCTCTCACCTGAAAACA+TGG | + | chr4.2:9727566-9727585 | None:intergenic | 40.0% | |
| ACATGAAAAGGACACAGCAA+AGG | + | chr4.2:9731387-9731406 | None:intergenic | 40.0% | |
| ACGGAACCATTTAGACAAGA+AGG | + | chr4.2:9728158-9728177 | None:intergenic | 40.0% | |
| AGAAGAGTAGATCAGATGCA+GGG | - | chr4.2:9726124-9726143 | MS.gene58131:intron | 40.0% | |
| AGATGGTAGAAACTCAGCTT+AGG | - | chr4.2:9726055-9726074 | MS.gene58131:CDS | 40.0% | |
| AGGAACTCAAGACGATCTAA+AGG | - | chr4.2:9727602-9727621 | MS.gene58131:intron | 40.0% | |
| AGGCAGCTCAGAGTTTAAAT+GGG | - | chr4.2:9729923-9729942 | MS.gene58131:intron | 40.0% | |
| AGGTAGTAGAGAGAAAGAGA+GGG | - | chr4.2:9725482-9725501 | MS.gene58131:intron | 40.0% | |
| AGGTTTGCAGCATAACATCA+GGG | + | chr4.2:9731775-9731794 | None:intergenic | 40.0% | |
| AGTCAAATCACTAGAGGCAA+GGG | - | chr4.2:9726274-9726293 | MS.gene58131:intron | 40.0% | |
| AGTCCTCTCGGATTTAATGT+CGG | + | chr4.2:9725280-9725299 | None:intergenic | 40.0% | |
| AGTGCGGTGATAAAAGATCT+TGG | + | chr4.2:9730671-9730690 | None:intergenic | 40.0% | |
| AGTTCCTATCCATGATCAGA+CGG | + | chr4.2:9727589-9727608 | None:intergenic | 40.0% | |
| ATAACACCTGGATTGCCAAA+AGG | + | chr4.2:9731036-9731055 | None:intergenic | 40.0% | |
| ATAAGCTAGCTGATAGCTGA+TGG | + | chr4.2:9729052-9729071 | None:intergenic | 40.0% | |
| ATAAGGAGAGAGAGAAGGAA+CGG | - | chr4.2:9725610-9725629 | MS.gene58131:intron | 40.0% | |
| ATACGAGTACTTGGAGAAGA+CGG | - | chr4.2:9725200-9725219 | MS.gene58131:CDS | 40.0% | |
| ATATTTCCCAACTGCAGCAT+TGG | - | chr4.2:9730961-9730980 | MS.gene58131:intron | 40.0% | |
| ATGCAAGTTCTTTATGCTGC+AGG | - | chr4.2:9729197-9729216 | MS.gene58131:intron | 40.0% | |
| ATGTGTGTGTGTGTTAACTG+AGG | - | chr4.2:9729544-9729563 | MS.gene58131:intron | 40.0% | |
| ATTGGGTTTCAATGCTAGCA+CGG | - | chr4.2:9726776-9726795 | MS.gene58131:intron | 40.0% | |
| ATTTCGAAAACAGAGATGGC+AGG | - | chr4.2:9725709-9725728 | MS.gene58131:intron | 40.0% | |
| CAAGACGATCTAAAGGAGTT+GGG | - | chr4.2:9727609-9727628 | MS.gene58131:intron | 40.0% | |
| CAGAGTTCGAATCTTGGTTA+GGG | - | chr4.2:9726174-9726193 | MS.gene58131:CDS | 40.0% | |
| CAGGGATAAGAAAGAGAATG+TGG | - | chr4.2:9727024-9727043 | MS.gene58131:intron | 40.0% | |
| CATAAGCAATGCTCTTGAGT+GGG | + | chr4.2:9730856-9730875 | None:intergenic | 40.0% | |
| CGACATAAATATGCAACACC+CGG | + | chr4.2:9731319-9731338 | None:intergenic | 40.0% | |
| CGAGATTTCGAAAACAGAGA+TGG | - | chr4.2:9725705-9725724 | MS.gene58131:intron | 40.0% | |
| CGCCAATTTGGACTCTAATA+TGG | - | chr4.2:9726878-9726897 | MS.gene58131:intron | 40.0% | |
| GAACGTCGGTAACAAACAAA+TGG | + | chr4.2:9730038-9730057 | None:intergenic | 40.0% | |
| GAAGATCGATGACATAGTCT+TGG | - | chr4.2:9727814-9727833 | MS.gene58131:CDS | 40.0% | |
| GAATTGTAAGTCTCTCACGT+TGG | - | chr4.2:9727959-9727978 | MS.gene58131:intron | 40.0% | |
| GACTTTCATTTGACCAGTAG+TGG | - | chr4.2:9728018-9728037 | MS.gene58131:intron | 40.0% | |
| GAGAGATAAGGAAAGGGAAA+AGG | - | chr4.2:9725572-9725591 | MS.gene58131:CDS | 40.0% | |
| GAGAGTAGTCAAATCACTAG+AGG | - | chr4.2:9726268-9726287 | MS.gene58131:intron | 40.0% | |
| GCCAATCCTTCTTGTCTAAA+TGG | - | chr4.2:9728149-9728168 | MS.gene58131:intron | 40.0% | |
| GGAAAGAAAAACTAAGGACC+CGG | + | chr4.2:9730650-9730669 | None:intergenic | 40.0% | |
| GTTCAATCTAATGCTTCCAG+TGG | - | chr4.2:9729331-9729350 | MS.gene58131:intron | 40.0% | |
| GTTGATCACAGCTATCTTCA+TGG | - | chr4.2:9731557-9731576 | MS.gene58131:intron | 40.0% | |
| TAAGGAAAGGGAAAAGGAAC+GGG | - | chr4.2:9725578-9725597 | MS.gene58131:CDS | 40.0% | |
| TACAGATCATGTTGGAAGTC+AGG | - | chr4.2:9730080-9730099 | MS.gene58131:intron | 40.0% | |
| TAGATCAACCCAGATTATCC+TGG | + | chr4.2:9726724-9726743 | None:intergenic | 40.0% | |
| TAGTCAAATCACTAGAGGCA+AGG | - | chr4.2:9726273-9726292 | MS.gene58131:intron | 40.0% | |
| TAGTTATTGGGATGGAGTGT+TGG | - | chr4.2:9725898-9725917 | MS.gene58131:intron | 40.0% | |
| TATGAGTTCTTCTCGAAAGC+TGG | - | chr4.2:9727247-9727266 | MS.gene58131:CDS | 40.0% | |
| TCAAGACGATCTAAAGGAGT+TGG | - | chr4.2:9727608-9727627 | MS.gene58131:intron | 40.0% | |
| TCTTCACTTCAACATGACTG+AGG | - | chr4.2:9729408-9729427 | MS.gene58131:intron | 40.0% | |
| TGCCACGTTCCTACAAATAA+GGG | - | chr4.2:9727458-9727477 | MS.gene58131:intron | 40.0% | |
| TGCCTTTGCATGTTCAAGAT+GGG | + | chr4.2:9729908-9729927 | None:intergenic | 40.0% | |
| TGTACAACTTCCTCTTGACA+TGG | - | chr4.2:9729759-9729778 | MS.gene58131:intron | 40.0% | |
| TGTGTGTGTGTGTTAACTGA+GGG | - | chr4.2:9729545-9729564 | MS.gene58131:intron | 40.0% | |
| TGTTAGAAACCTGAACGACA+GGG | - | chr4.2:9730279-9730298 | MS.gene58131:intron | 40.0% | |
| TTAAATCCGAGAGGACTTAC+CGG | - | chr4.2:9725283-9725302 | MS.gene58131:intron | 40.0% | |
| TTGCCACGTTCCTACAAATA+AGG | - | chr4.2:9727457-9727476 | MS.gene58131:intron | 40.0% | |
| TTGCTTATGCAAAGATTGGC+TGG | - | chr4.2:9730867-9730886 | MS.gene58131:intron | 40.0% | |
| TTGGATGAATCCTTGTCTTC+CGG | + | chr4.2:9725237-9725256 | None:intergenic | 40.0% | |
| TTGTTAGAAACCTGAACGAC+AGG | - | chr4.2:9730278-9730297 | MS.gene58131:intron | 40.0% | |
| ! | ACATTTTTGCAACGGATGCA+AGG | - | chr4.2:9728119-9728138 | MS.gene58131:intron | 40.0% |
| ! | ATGCAGGGATGAGAATTTTG+TGG | - | chr4.2:9725955-9725974 | MS.gene58131:CDS | 40.0% |
| ! | GTACTTGCAGTTTGAAACAG+TGG | - | chr4.2:9731482-9731501 | MS.gene58131:intron | 40.0% |
| ! | TGATGATGATGAAGGAGGAT+TGG | - | chr4.2:9730128-9730147 | MS.gene58131:intron | 40.0% |
| !! | AAGAGTGTTCTAAATACGGC+CGG | - | chr4.2:9731297-9731316 | MS.gene58131:intron | 40.0% |
| !! | AGGGGAAGTATCATGTATAG+AGG | + | chr4.2:9727516-9727535 | None:intergenic | 40.0% |
| !! | GACTTTGATGATGATGAAGG+AGG | - | chr4.2:9730123-9730142 | MS.gene58131:intron | 40.0% |
| !! | GCAGACTTTGATGATGATGA+AGG | - | chr4.2:9730120-9730139 | MS.gene58131:intron | 40.0% |
| !! | GGCTGCTACTTTATTGTGTA+TGG | - | chr4.2:9727381-9727400 | MS.gene58131:intron | 40.0% |
| !!! | AAGATTTTTTTCGGCCTCAG+AGG | + | chr4.2:9729311-9729330 | None:intergenic | 40.0% |
| !!! | AGATTTTTTTCGGCCTCAGA+GGG | + | chr4.2:9729310-9729329 | None:intergenic | 40.0% |
| !!! | TCTCTCTCCGTTGCTTTTAA+CGG | + | chr4.2:9727223-9727242 | None:intergenic | 40.0% |
| !!! | TGCAGTTTTGGCTCATGTAT+AGG | - | chr4.2:9726819-9726838 | MS.gene58131:intron | 40.0% |
| !!! | TGTTTTTGAGACCAACCAAC+CGG | - | chr4.2:9730628-9730647 | MS.gene58131:intron | 40.0% |
| AACGAGCAATGCACATGAGA+TGG | - | chr4.2:9731523-9731542 | MS.gene58131:intron | 45.0% | |
| AAGAGGAGAAAGAGAGACCA+AGG | - | chr4.2:9725646-9725665 | MS.gene58131:intron | 45.0% | |
| AAGATCGTTCACGGTGTTCA+CGG | + | chr4.2:9725431-9725450 | None:intergenic | 45.0% | |
| ACAGTTCTCTGATCCCTTTC+TGG | + | chr4.2:9727064-9727083 | None:intergenic | 45.0% | |
| ACTTCCTCTTGACATGGAGA+CGG | - | chr4.2:9729765-9729784 | MS.gene58131:intron | 45.0% | |
| AGAAAAACTAAGGACCCGGT+TGG | + | chr4.2:9730646-9730665 | None:intergenic | 45.0% | |
| AGGCAGATGTAAGCATTCAC+TGG | + | chr4.2:9727496-9727515 | None:intergenic | 45.0% | |
| ATAGGGAGAGAGAAAAGGAG+AGG | - | chr4.2:9725544-9725563 | MS.gene58131:CDS | 45.0% | |
| ATGCTAAAAGCCTGCTGAAC+AGG | + | chr4.2:9731012-9731031 | None:intergenic | 45.0% | |
| ATGTCCGTCTGATCATGGAT+AGG | - | chr4.2:9727582-9727601 | MS.gene58131:intron | 45.0% | |
| ATTATCCTGGTATCCCTGGT+CGG | + | chr4.2:9726711-9726730 | None:intergenic | 45.0% | |
| ATTGGTGTGCCAACTGTGAA+TGG | - | chr4.2:9730979-9730998 | MS.gene58131:intron | 45.0% | |
| CAACCAATCCTAAGTAGGGT+TGG | + | chr4.2:9726401-9726420 | None:intergenic | 45.0% | |
| CAGGGATACCAGGATAATCT+GGG | - | chr4.2:9726713-9726732 | MS.gene58131:intron | 45.0% | |
| CAGTTCTCTGATCCCTTTCT+GGG | + | chr4.2:9727063-9727082 | None:intergenic | 45.0% | |
| CATGAGCCAAAACTGCAGTA+AGG | + | chr4.2:9726816-9726835 | None:intergenic | 45.0% | |
| CATGCCATAGTGATGAGGAA+TGG | - | chr4.2:9727745-9727764 | MS.gene58131:CDS | 45.0% | |
| CATTCCTCATCACTATGGCA+TGG | + | chr4.2:9727747-9727766 | None:intergenic | 45.0% | |
| CCACGTTCCTACAAATAAGG+GGG | - | chr4.2:9727460-9727479 | MS.gene58131:intron | 45.0% | |
| CCAGAGTTCGAATCTTGGTT+AGG | - | chr4.2:9726173-9726192 | MS.gene58131:CDS | 45.0% | |
| CCTAACCAAGATTCGAACTC+TGG | + | chr4.2:9726176-9726195 | None:intergenic | 45.0% | |
| CTCACCATTCCTCATCACTA+TGG | + | chr4.2:9727752-9727771 | None:intergenic | 45.0% | |
| CTGCCTTTGCATGTTCAAGA+TGG | + | chr4.2:9729909-9729928 | None:intergenic | 45.0% | |
| CTTCGACGAATACGAGTACT+TGG | - | chr4.2:9725191-9725210 | MS.gene58131:CDS | 45.0% | |
| GAAACTCAGCTTAGGTGGTT+CGG | - | chr4.2:9726063-9726082 | MS.gene58131:CDS | 45.0% | |
| GAAAGAGAATGTGGAACCTG+AGG | - | chr4.2:9727033-9727052 | MS.gene58131:intron | 45.0% | |
| GAGAGATAAGGAGAGGGATA+GGG | - | chr4.2:9725527-9725546 | MS.gene58131:CDS | 45.0% | |
| GAGGTAGTAGAGAGAAAGAG+AGG | - | chr4.2:9725481-9725500 | MS.gene58131:intron | 45.0% | |
| GATTGCTGGCAGGACTATAA+AGG | - | chr4.2:9729954-9729973 | MS.gene58131:intron | 45.0% | |
| GCATAAGCAATGCTCTTGAG+TGG | + | chr4.2:9730857-9730876 | None:intergenic | 45.0% | |
| GCCACGTTCCTACAAATAAG+GGG | - | chr4.2:9727459-9727478 | MS.gene58131:intron | 45.0% | |
| GCTGTTGAGGATTTGCACTT+AGG | - | chr4.2:9730423-9730442 | MS.gene58131:intron | 45.0% | |
| GCTGTTGTAGTAGGACCATA+TGG | - | chr4.2:9729355-9729374 | MS.gene58131:intron | 45.0% | |
| GGAGAGGAGAGATAAGGAAA+GGG | - | chr4.2:9725566-9725585 | MS.gene58131:CDS | 45.0% | |
| GGCAGATGTAAGCATTCACT+GGG | + | chr4.2:9727495-9727514 | None:intergenic | 45.0% | |
| GTGAACACCAAAGAGCAAAC+AGG | + | chr4.2:9727195-9727214 | None:intergenic | 45.0% | |
| TAAGGAGAGAGAGAAGGAAC+GGG | - | chr4.2:9725611-9725630 | MS.gene58131:intron | 45.0% | |
| TAATGCACTAGGCAGTAGGA+TGG | + | chr4.2:9728048-9728067 | None:intergenic | 45.0% | |
| TACCGACGTTCGTCAAATTC+AGG | - | chr4.2:9730047-9730066 | MS.gene58131:intron | 45.0% | |
| TAGAGAGAAAGAGAGGGAGA+AGG | - | chr4.2:9725488-9725507 | MS.gene58131:CDS | 45.0% | |
| TAGCCAACCCTACTTAGGAT+TGG | - | chr4.2:9726395-9726414 | MS.gene58131:intron | 45.0% | |
| TAGGGAGAGAGAAAAGGAGA+GGG | - | chr4.2:9725545-9725564 | MS.gene58131:CDS | 45.0% | |
| TATAGCTGATGGCTGATAGC+TGG | + | chr4.2:9729022-9729041 | None:intergenic | 45.0% | |
| TCACCGACATTAAATCCGAG+AGG | - | chr4.2:9725274-9725293 | MS.gene58131:intron | 45.0% | |
| TCAGAGGGTTTCACCATTAC+AGG | + | chr4.2:9729295-9729314 | None:intergenic | 45.0% | |
| TGAGCCATTTGGTCAGATTG+AGG | - | chr4.2:9729735-9729754 | MS.gene58131:intron | 45.0% | |
| TGCCCATCTTGAACATGCAA+AGG | - | chr4.2:9729903-9729922 | MS.gene58131:intron | 45.0% | |
| TGCTCTTGAGTGGGCATTTA+AGG | + | chr4.2:9730847-9730866 | None:intergenic | 45.0% | |
| TGGTAGAAACTCAGCTTAGG+TGG | - | chr4.2:9726058-9726077 | MS.gene58131:CDS | 45.0% | |
| TGTAATGGTGAAACCCTCTG+AGG | - | chr4.2:9729294-9729313 | MS.gene58131:intron | 45.0% | |
| TGTTACCAAACACAGCCGTA+GGG | + | chr4.2:9728335-9728354 | None:intergenic | 45.0% | |
| TTAGCCATGCCATAGTGATG+AGG | - | chr4.2:9727740-9727759 | MS.gene58131:CDS | 45.0% | |
| TTGCTAATGCACTAGGCAGT+AGG | + | chr4.2:9728052-9728071 | None:intergenic | 45.0% | |
| TTGGTGTGCCAACTGTGAAT+GGG | - | chr4.2:9730980-9730999 | MS.gene58131:intron | 45.0% | |
| TTTCTGTCCACTGCTCCATA+TGG | + | chr4.2:9729373-9729392 | None:intergenic | 45.0% | |
| ! | AGAGTGTTCTAAATACGGCC+GGG | - | chr4.2:9731298-9731317 | MS.gene58131:intron | 45.0% |
| ! | CAGGCTTTTAGCATGCCTTT+TGG | - | chr4.2:9731018-9731037 | MS.gene58131:intron | 45.0% |
| ! | CTCTAAGAAGGATCGCGATA+GGG | - | chr4.2:9725386-9725405 | MS.gene58131:intron | 45.0% |
| ! | GCACGCACACATTTTTGCAA+CGG | - | chr4.2:9728111-9728130 | MS.gene58131:intron | 45.0% |
| ! | TATGTTTGATCCAAGCACCG+AGG | - | chr4.2:9731143-9731162 | MS.gene58131:intron | 45.0% |
| ! | TGTGTACACAGAAGAAGTGC+AGG | - | chr4.2:9731453-9731472 | MS.gene58131:intron | 45.0% |
| ! | TTGTGTTGGTAGAACTGACG+CGG | + | chr4.2:9731061-9731080 | None:intergenic | 45.0% |
| !! | ACTTGACTTGCAGGAGATTC+AGG | - | chr4.2:9727005-9727024 | MS.gene58131:intron | 45.0% |
| !! | CTTGACTTGCAGGAGATTCA+GGG | - | chr4.2:9727006-9727025 | MS.gene58131:intron | 45.0% |
| !! | CTTTTCAGGCCCTTTTCTGT+TGG | - | chr4.2:9730695-9730714 | MS.gene58131:intron | 45.0% |
| !! | TATTGGGATGGAGTGTTGGA+AGG | - | chr4.2:9725902-9725921 | MS.gene58131:CDS | 45.0% |
| !! | TCACCGCACTTTCACTTTTC+AGG | - | chr4.2:9730681-9730700 | MS.gene58131:intron | 45.0% |
| !!! | ACTGTTTTTGCCTACCAGGT+TGG | - | chr4.2:9727079-9727098 | MS.gene58131:intron | 45.0% |
| !!! | GAGAACTGTTTTTGCCTACC+AGG | - | chr4.2:9727075-9727094 | MS.gene58131:intron | 45.0% |
| !!! | GTTTTTGAGACCAACCAACC+GGG | - | chr4.2:9730629-9730648 | MS.gene58131:intron | 45.0% |
| !!! | TTTTTGCCTACCAGGTTGGT+TGG | - | chr4.2:9727083-9727102 | MS.gene58131:intron | 45.0% |
| !! | AACAAAATAAAATAAATAAA+AGG | + | chr4.2:9728522-9728541 | None:intergenic | 5.0% |
| !! | TTAAATAGTATAAATTTATA+CGG | - | chr4.2:9727127-9727146 | MS.gene58131:CDS | 5.0% |
| AAACTAAGGACCCGGTTGGT+TGG | + | chr4.2:9730642-9730661 | None:intergenic | 50.0% | |
| ACTTCTCGGGCAACCTGTAA+TGG | - | chr4.2:9729279-9729298 | MS.gene58131:intron | 50.0% | |
| AGAGAGAAAAGGAGAGGGAG+AGG | - | chr4.2:9725550-9725569 | MS.gene58131:CDS | 50.0% | |
| AGGAGAAAGAGAGACCAAGG+AGG | - | chr4.2:9725649-9725668 | MS.gene58131:intron | 50.0% | |
| AGGTGGGAGAGATAAGGAGA+GGG | - | chr4.2:9725521-9725540 | MS.gene58131:CDS | 50.0% | |
| AGTAGGACCATATGGAGCAG+TGG | - | chr4.2:9729363-9729382 | MS.gene58131:intron | 50.0% | |
| ATGGATCTCAGTACCTCTCG+AGG | - | chr4.2:9726670-9726689 | MS.gene58131:intron | 50.0% | |
| CATCAAACTCCCTGTCGTTC+AGG | + | chr4.2:9730291-9730310 | None:intergenic | 50.0% | |
| CATTACTCCCTCCGAAGACT+GGG | - | chr4.2:9726855-9726874 | MS.gene58131:intron | 50.0% | |
| CCAGATTATCCTGGTATCCC+TGG | + | chr4.2:9726715-9726734 | None:intergenic | 50.0% | |
| CCAGGGATACCAGGATAATC+TGG | - | chr4.2:9726712-9726731 | MS.gene58131:intron | 50.0% | |
| CCATGTAGCCAACCCTACTT+AGG | - | chr4.2:9726390-9726409 | MS.gene58131:intron | 50.0% | |
| CTCTCTGGCCAACTACTTCT+CGG | - | chr4.2:9729265-9729284 | MS.gene58131:intron | 50.0% | |
| CTTCCTCTTGACATGGAGAC+GGG | - | chr4.2:9729766-9729785 | MS.gene58131:intron | 50.0% | |
| GAACACCGTGAACGATCTTC+CGG | - | chr4.2:9725432-9725451 | MS.gene58131:intron | 50.0% | |
| GAGAAAGAGAGGGAGAAGGA+CGG | - | chr4.2:9725492-9725511 | MS.gene58131:CDS | 50.0% | |
| GAGAGATGTCCGTCTGATCA+TGG | - | chr4.2:9727577-9727596 | MS.gene58131:intron | 50.0% | |
| GAGGGATAGGGAGAGAGAAA+AGG | - | chr4.2:9725539-9725558 | MS.gene58131:CDS | 50.0% | |
| GCAGGGATGTGTAACTCACT+TGG | - | chr4.2:9726141-9726160 | MS.gene58131:intron | 50.0% | |
| GCTGTCCAGAGTTCGAATCT+TGG | - | chr4.2:9726168-9726187 | MS.gene58131:CDS | 50.0% | |
| GGAAATTGGAGATTGCTGGC+AGG | - | chr4.2:9729944-9729963 | MS.gene58131:intron | 50.0% | |
| GGAACGGGAGAGAAGAGATA+AGG | - | chr4.2:9725593-9725612 | MS.gene58131:intron | 50.0% | |
| GGAGAGATAAGGAGAGGGAT+AGG | - | chr4.2:9725526-9725545 | MS.gene58131:CDS | 50.0% | |
| GGGAGAGGAGAGATAAGGAA+AGG | - | chr4.2:9725565-9725584 | MS.gene58131:CDS | 50.0% | |
| GGGCCTGAAAAGTGAAAGTG+CGG | + | chr4.2:9730687-9730706 | None:intergenic | 50.0% | |
| GTAGGATGGTTACCCACTAC+TGG | + | chr4.2:9728034-9728053 | None:intergenic | 50.0% | |
| GTGTGCGTGCGTGCAAATAA+AGG | + | chr4.2:9728101-9728120 | None:intergenic | 50.0% | |
| GTGTTACCAAACACAGCCGT+AGG | + | chr4.2:9728336-9728355 | None:intergenic | 50.0% | |
| GTTCTTCTCGAAAGCTGGCA+AGG | - | chr4.2:9727252-9727271 | MS.gene58131:CDS | 50.0% | |
| TCATTACTCCCTCCGAAGAC+TGG | - | chr4.2:9726854-9726873 | MS.gene58131:intron | 50.0% | |
| TCCAGTGGAGCTGTTGTAGT+AGG | - | chr4.2:9729346-9729365 | MS.gene58131:intron | 50.0% | |
| TCCTACTACAACAGCTCCAC+TGG | + | chr4.2:9729350-9729369 | None:intergenic | 50.0% | |
| TCTCTGGCCAACTACTTCTC+GGG | - | chr4.2:9729266-9729285 | MS.gene58131:intron | 50.0% | |
| TGAGAGAGGTGGGAGAGATA+AGG | - | chr4.2:9725515-9725534 | MS.gene58131:CDS | 50.0% | |
| TGATGCGATGTCAGTGCCAA+TGG | - | chr4.2:9729234-9729253 | MS.gene58131:intron | 50.0% | |
| TGGATCTCAGTACCTCTCGA+GGG | - | chr4.2:9726671-9726690 | MS.gene58131:intron | 50.0% | |
| TGTGCCAACTGTGAATGGGT+CGG | - | chr4.2:9730984-9731003 | MS.gene58131:intron | 50.0% | |
| TGTTTCCCTACGGCTGTGTT+TGG | - | chr4.2:9728327-9728346 | MS.gene58131:intron | 50.0% | |
| TTATCCTGGTATCCCTGGTC+GGG | + | chr4.2:9726710-9726729 | None:intergenic | 50.0% | |
| ! | ACATGAGATGGTTTGCACGC+AGG | - | chr4.2:9731535-9731554 | MS.gene58131:intron | 50.0% |
| ! | ACGGGCTGAGAGAGAAAAAG+AGG | - | chr4.2:9725629-9725648 | MS.gene58131:intron | 50.0% |
| ! | AGCATGCCTTTTGGCAATCC+AGG | - | chr4.2:9731027-9731046 | MS.gene58131:intron | 50.0% |
| ! | AGTCTCTCACGTTGGTGTCT+AGG | - | chr4.2:9727967-9727986 | MS.gene58131:intron | 50.0% |
| ! | CATGCAGCCCCCTTATTTGT+AGG | + | chr4.2:9727470-9727489 | None:intergenic | 50.0% |
| ! | CCCCCTTATTTGTAGGAACG+TGG | + | chr4.2:9727463-9727482 | None:intergenic | 50.0% |
| ! | TGTGTTGGTAGAACTGACGC+GGG | + | chr4.2:9731060-9731079 | None:intergenic | 50.0% |
| !! | ATTCCTACTGGTTCTGCCAC+AGG | + | chr4.2:9731096-9731115 | None:intergenic | 50.0% |
| !! | CCTAAGTAGGGTTGGCTACA+TGG | + | chr4.2:9726393-9726412 | None:intergenic | 50.0% |
| !! | CGACGAGAATGGCTCTAAGA+AGG | - | chr4.2:9725374-9725393 | MS.gene58131:intron | 50.0% |
| !! | CTGGTACTGACATTCCCACA+AGG | - | chr4.2:9730886-9730905 | MS.gene58131:intron | 50.0% |
| !! | GCTCTAAGAAGGATCGCGAT+AGG | - | chr4.2:9725385-9725404 | MS.gene58131:intron | 50.0% |
| !! | TCATCACAAACCTCGGTGCT+TGG | + | chr4.2:9731156-9731175 | None:intergenic | 50.0% |
| !! | TTCCTACTGGTTCTGCCACA+GGG | + | chr4.2:9731095-9731114 | None:intergenic | 50.0% |
| AACCTGAGGCAGACCCAGAA+AGG | - | chr4.2:9727047-9727066 | MS.gene58131:intron | 55.0% | |
| AACGATCTTCCGGTCGTCAC+CGG | - | chr4.2:9725442-9725461 | MS.gene58131:intron | 55.0% | |
| AAGATGGGGTGGTGTGTGTG+TGG | + | chr4.2:9727926-9727945 | None:intergenic | 55.0% | |
| ACAAGTCATGCCTACCCCTG+TGG | - | chr4.2:9731077-9731096 | MS.gene58131:intron | 55.0% | |
| ACCTGAGGCAGACCCAGAAA+GGG | - | chr4.2:9727048-9727067 | MS.gene58131:intron | 55.0% | |
| ACTGACGCGGGTATAACACC+TGG | + | chr4.2:9731048-9731067 | None:intergenic | 55.0% | |
| AGAAGGACGGTGAGAGAGGT+GGG | - | chr4.2:9725505-9725524 | MS.gene58131:CDS | 55.0% | |
| AGGCAACCAACCAACCTGGT+AGG | + | chr4.2:9727092-9727111 | None:intergenic | 55.0% | |
| AGTCGTCCTGAGAGAGACAG+AGG | - | chr4.2:9725678-9725697 | MS.gene58131:intron | 55.0% | |
| ATGGAGACGGGACACTGCAA+GGG | - | chr4.2:9729778-9729797 | MS.gene58131:intron | 55.0% | |
| ATGGAGGCAACCAACCAACC+TGG | + | chr4.2:9727096-9727115 | None:intergenic | 55.0% | |
| CACTCGCTGGGAATTCCTAC+TGG | + | chr4.2:9731108-9731127 | None:intergenic | 55.0% | |
| CAGGTTGCCCGAGAAGTAGT+TGG | + | chr4.2:9729276-9729295 | None:intergenic | 55.0% | |
| CCAAATTGGCGCCCAGTCTT+CGG | + | chr4.2:9726869-9726888 | None:intergenic | 55.0% | |
| CCAATGGCAATTGCGCTCTC+TGG | - | chr4.2:9729250-9729269 | MS.gene58131:intron | 55.0% | |
| CGAGTACTTGGAGAAGACGG+TGG | - | chr4.2:9725203-9725222 | MS.gene58131:CDS | 55.0% | |
| GACGACCGGAAGATCGTTCA+CGG | + | chr4.2:9725440-9725459 | None:intergenic | 55.0% | |
| GACTGAGGCTAATCTCCGAG+AGG | - | chr4.2:9729423-9729442 | MS.gene58131:intron | 55.0% | |
| GAGAGGACTTACCGGAAGCA+CGG | - | chr4.2:9725291-9725310 | MS.gene58131:intron | 55.0% | |
| GAGGTGGGAGAGATAAGGAG+AGG | - | chr4.2:9725520-9725539 | MS.gene58131:CDS | 55.0% | |
| GGAACCGACCCATTCACAGT+TGG | + | chr4.2:9730991-9731010 | None:intergenic | 55.0% | |
| GGACGACTCATACTCCTCCT+TGG | + | chr4.2:9725666-9725685 | None:intergenic | 55.0% | |
| GGAGAGGGAGAGGAGAGATA+AGG | - | chr4.2:9725560-9725579 | MS.gene58131:CDS | 55.0% | |
| GGCACACCAATGCTGCAGTT+GGG | + | chr4.2:9730970-9730989 | None:intergenic | 55.0% | |
| GGTGTTCACGGTCACGTTCA+CGG | + | chr4.2:9725419-9725438 | None:intergenic | 55.0% | |
| GTACTTGGAGAAGACGGTGG+AGG | - | chr4.2:9725206-9725225 | MS.gene58131:CDS | 55.0% | |
| GTGCTTCCGGTAAGTCCTCT+CGG | + | chr4.2:9725292-9725311 | None:intergenic | 55.0% | |
| TGGCACACCAATGCTGCAGT+TGG | + | chr4.2:9730971-9730990 | None:intergenic | 55.0% | |
| TGTCCCGTCTCCATGTCAAG+AGG | + | chr4.2:9729772-9729791 | None:intergenic | 55.0% | |
| ! | ACGGGACACTGCAAGGGTTT+TGG | - | chr4.2:9729784-9729803 | MS.gene58131:intron | 55.0% |
| ! | CCAGAGAGCGCAATTGCCAT+TGG | + | chr4.2:9729253-9729272 | None:intergenic | 55.0% |
| ! | CGGGACACTGCAAGGGTTTT+GGG | - | chr4.2:9729785-9729804 | MS.gene58131:intron | 55.0% |
| ! | GGGGTAGGCATGACTTGTGT+TGG | + | chr4.2:9731075-9731094 | None:intergenic | 55.0% |
| !! | ACCTCTCGAGGGATTAGTCC+TGG | - | chr4.2:9726682-9726701 | MS.gene58131:intron | 55.0% |
| !! | TCCTACTGGTTCTGCCACAG+GGG | + | chr4.2:9731094-9731113 | None:intergenic | 55.0% |
| AATTGGCGCCCAGTCTTCGG+AGG | + | chr4.2:9726866-9726885 | None:intergenic | 60.0% | |
| ACCCCTGTGGCAGAACCAGT+AGG | - | chr4.2:9731090-9731109 | MS.gene58131:intron | 60.0% | |
| ACGATCTTCCGGTCGTCACC+GGG | - | chr4.2:9725443-9725462 | MS.gene58131:intron | 60.0% | |
| AGGGAGAAGGACGGTGAGAG+AGG | - | chr4.2:9725501-9725520 | MS.gene58131:CDS | 60.0% | |
| ATCTCGACGGCGGCGAAGAT+AGG | - | chr4.2:9725325-9725344 | MS.gene58131:intron | 60.0% | |
| ATGGGGTGGTGTGTGTGTGG+AGG | + | chr4.2:9727923-9727942 | None:intergenic | 60.0% | |
| ATTAGTCCTGGCTCCCGACC+AGG | - | chr4.2:9726694-9726713 | MS.gene58131:intron | 60.0% | |
| ATTGGCGCCCAGTCTTCGGA+GGG | + | chr4.2:9726865-9726884 | None:intergenic | 60.0% | |
| CATGGAGACGGGACACTGCA+AGG | - | chr4.2:9729777-9729796 | MS.gene58131:intron | 60.0% | |
| CCGAAGACTGGGCGCCAATT+TGG | - | chr4.2:9726866-9726885 | MS.gene58131:intron | 60.0% | |
| CGCTCTCCTCTGTCTCTCTC+AGG | + | chr4.2:9725687-9725706 | None:intergenic | 60.0% | |
| GAAGACGGTGGAGGAGCAAC+CGG | - | chr4.2:9725215-9725234 | MS.gene58131:intron | 60.0% | |
| GAGAAGGACGGTGAGAGAGG+TGG | - | chr4.2:9725504-9725523 | MS.gene58131:CDS | 60.0% | |
| GCCAGGACTAATCCCTCGAG+AGG | + | chr4.2:9726686-9726705 | None:intergenic | 60.0% | |
| GCGAAGATAGGCGGAGCAAG+AGG | - | chr4.2:9725337-9725356 | MS.gene58131:intron | 60.0% | |
| GGAGGAGCAACCGGAAGACA+AGG | - | chr4.2:9725224-9725243 | MS.gene58131:intron | 60.0% | |
| TCCCTTTCTGGGTCTGCCTC+AGG | + | chr4.2:9727052-9727071 | None:intergenic | 60.0% | |
| TGGGGTGGTGTGTGTGTGGA+GGG | + | chr4.2:9727922-9727941 | None:intergenic | 60.0% | |
| TTAGTCCTGGCTCCCGACCA+GGG | - | chr4.2:9726695-9726714 | MS.gene58131:intron | 60.0% | |
| ! | TGGGTCGGTTCCTGTTCAGC+AGG | - | chr4.2:9730999-9731018 | MS.gene58131:intron | 60.0% |
| !! | ACTGGTTCTGCCACAGGGGT+AGG | + | chr4.2:9731090-9731109 | None:intergenic | 60.0% |
| AGGCGGAGCAAGAGGTCACG+CGG | - | chr4.2:9725345-9725364 | MS.gene58131:intron | 65.0% | |
| CTCTCTCTCCGTCCCTCTCC+CGG | + | chr4.2:9725464-9725483 | None:intergenic | 65.0% | |
| GGGGTGGTGTGTGTGTGGAG+GGG | + | chr4.2:9727921-9727940 | None:intergenic | 65.0% | |
| GTGGTGTGTGTGTGGAGGGG+AGG | + | chr4.2:9727918-9727937 | None:intergenic | 65.0% | |
| TCGACGGCGGCGAAGATAGG+CGG | - | chr4.2:9725328-9725347 | MS.gene58131:intron | 65.0% | |
| TTCCGGTCGTCACCGGGAGA+GGG | - | chr4.2:9725449-9725468 | MS.gene58131:intron | 65.0% | |
| CGCGGCGGAGACGACGAGAA+TGG | - | chr4.2:9725363-9725382 | MS.gene58131:intron | 70.0% | |
| CGGAGCAAGAGGTCACGCGG+CGG | - | chr4.2:9725348-9725367 | MS.gene58131:intron | 70.0% | |
| CGGGAGAGGGACGGAGAGAG+AGG | - | chr4.2:9725462-9725481 | MS.gene58131:intron | 70.0% | |
| CTTCCGGTCGTCACCGGGAG+AGG | - | chr4.2:9725448-9725467 | MS.gene58131:intron | 70.0% | |
| GCCGACGACGATCTCGACGG+CGG | - | chr4.2:9725315-9725334 | MS.gene58131:intron | 70.0% | |
| GCCGCCGTCGAGATCGTCGT+CGG | + | chr4.2:9725319-9725338 | None:intergenic | 70.0% | |
| GGCTCCCGACCAGGGATACC+AGG | - | chr4.2:9726703-9726722 | MS.gene58131:intron | 70.0% | |
| GGTATCCCTGGTCGGGAGCC+AGG | + | chr4.2:9726703-9726722 | None:intergenic | 70.0% | |
| GGTCGTCACCGGGAGAGGGA+CGG | - | chr4.2:9725453-9725472 | MS.gene58131:intron | 70.0% | |
| GTCCCTCTCCCGGTGACGAC+CGG | + | chr4.2:9725454-9725473 | None:intergenic | 70.0% | |
| !! | GGCGCCGACGACGATCTCGA+CGG | - | chr4.2:9725312-9725331 | MS.gene58131:intron | 70.0% |
| CGTCGTCGGCGCCGTGCTTC+CGG | + | chr4.2:9725305-9725324 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 9725186 | 9731877 | 9725186 | ID=MS.gene58131 |
| chr4.2 | mRNA | 9725186 | 9731877 | 9725186 | ID=MS.gene58131.t1;Parent=MS.gene58131 |
| chr4.2 | exon | 9731625 | 9731877 | 9731625 | ID=MS.gene58131.t1.exon1;Parent=MS.gene58131.t1 |
| chr4.2 | CDS | 9731625 | 9731877 | 9731625 | ID=cds.MS.gene58131.t1;Parent=MS.gene58131.t1 |
| chr4.2 | exon | 9730411 | 9730435 | 9730411 | ID=MS.gene58131.t1.exon2;Parent=MS.gene58131.t1 |
| chr4.2 | CDS | 9730411 | 9730435 | 9730411 | ID=cds.MS.gene58131.t1;Parent=MS.gene58131.t1 |
| chr4.2 | exon | 9729967 | 9730045 | 9729967 | ID=MS.gene58131.t1.exon3;Parent=MS.gene58131.t1 |
| chr4.2 | CDS | 9729967 | 9730045 | 9729967 | ID=cds.MS.gene58131.t1;Parent=MS.gene58131.t1 |
| chr4.2 | exon | 9729790 | 9729846 | 9729790 | ID=MS.gene58131.t1.exon4;Parent=MS.gene58131.t1 |
| chr4.2 | CDS | 9729790 | 9729846 | 9729790 | ID=cds.MS.gene58131.t1;Parent=MS.gene58131.t1 |
| chr4.2 | exon | 9729433 | 9729488 | 9729433 | ID=MS.gene58131.t1.exon5;Parent=MS.gene58131.t1 |
| chr4.2 | CDS | 9729433 | 9729488 | 9729433 | ID=cds.MS.gene58131.t1;Parent=MS.gene58131.t1 |
| chr4.2 | exon | 9727619 | 9727844 | 9727619 | ID=MS.gene58131.t1.exon6;Parent=MS.gene58131.t1 |
| chr4.2 | CDS | 9727619 | 9727844 | 9727619 | ID=cds.MS.gene58131.t1;Parent=MS.gene58131.t1 |
| chr4.2 | exon | 9727247 | 9727333 | 9727247 | ID=MS.gene58131.t1.exon7;Parent=MS.gene58131.t1 |
| chr4.2 | CDS | 9727247 | 9727333 | 9727247 | ID=cds.MS.gene58131.t1;Parent=MS.gene58131.t1 |
| chr4.2 | exon | 9727088 | 9727162 | 9727088 | ID=MS.gene58131.t1.exon8;Parent=MS.gene58131.t1 |
| chr4.2 | CDS | 9727088 | 9727162 | 9727088 | ID=cds.MS.gene58131.t1;Parent=MS.gene58131.t1 |
| chr4.2 | exon | 9726914 | 9726994 | 9726914 | ID=MS.gene58131.t1.exon9;Parent=MS.gene58131.t1 |
| chr4.2 | CDS | 9726914 | 9726994 | 9726914 | ID=cds.MS.gene58131.t1;Parent=MS.gene58131.t1 |
| chr4.2 | exon | 9726156 | 9726220 | 9726156 | ID=MS.gene58131.t1.exon10;Parent=MS.gene58131.t1 |
| chr4.2 | CDS | 9726156 | 9726220 | 9726156 | ID=cds.MS.gene58131.t1;Parent=MS.gene58131.t1 |
| chr4.2 | exon | 9725899 | 9726085 | 9725899 | ID=MS.gene58131.t1.exon11;Parent=MS.gene58131.t1 |
| chr4.2 | CDS | 9725899 | 9726085 | 9725899 | ID=cds.MS.gene58131.t1;Parent=MS.gene58131.t1 |
| chr4.2 | exon | 9725721 | 9725809 | 9725721 | ID=MS.gene58131.t1.exon12;Parent=MS.gene58131.t1 |
| chr4.2 | CDS | 9725721 | 9725809 | 9725721 | ID=cds.MS.gene58131.t1;Parent=MS.gene58131.t1 |
| chr4.2 | exon | 9725485 | 9725599 | 9725485 | ID=MS.gene58131.t1.exon13;Parent=MS.gene58131.t1 |
| chr4.2 | CDS | 9725485 | 9725599 | 9725485 | ID=cds.MS.gene58131.t1;Parent=MS.gene58131.t1 |
| chr4.2 | exon | 9725186 | 9725227 | 9725186 | ID=MS.gene58131.t1.exon14;Parent=MS.gene58131.t1 |
| chr4.2 | CDS | 9725186 | 9725227 | 9725186 | ID=cds.MS.gene58131.t1;Parent=MS.gene58131.t1 |
| Gene Sequence |
| Protein sequence |
