AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene58775

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58775.t1 MTR_4g116420 96.875 384 12 0 1 384 1 384 0.0 770
MS.gene58775.t1 MTR_3g107880 59.016 305 122 2 79 383 18 319 8.18e-131 378
MS.gene58775.t1 MTR_3g107880 59.016 305 122 2 79 383 76 377 2.72e-130 379
MS.gene58775.t1 MTR_3g107880 59.016 305 122 2 79 383 75 376 2.78e-130 379
MS.gene58775.t1 MTR_5g024340 52.145 303 139 3 80 382 80 376 3.54e-104 312
MS.gene58775.t1 MTR_1g086350 48.308 325 140 6 77 383 55 369 1.80e-98 298
MS.gene58775.t1 MTR_1g086350 48.308 325 140 6 77 383 71 385 2.01e-98 298
MS.gene58775.t1 MTR_4g123080 45.763 354 162 8 44 383 42 379 6.16e-89 273
MS.gene58775.t1 MTR_2g033000 47.321 336 148 6 62 383 46 366 6.82e-89 273
MS.gene58775.t1 MTR_4g123080 48.742 318 142 6 80 383 51 361 9.31e-89 272
MS.gene58775.t1 MTR_1g086350 48.227 282 118 6 120 383 12 283 2.42e-82 253
MS.gene58775.t1 MTR_5g071550 36.330 267 134 7 93 348 131 372 2.24e-45 160
MS.gene58775.t1 MTR_1g050520 31.792 346 180 9 16 348 340 642 1.15e-42 158
MS.gene58775.t1 MTR_1g014640 35.206 267 148 5 87 350 79 323 8.44e-42 150
MS.gene58775.t1 MTR_1g013400 35.206 267 148 5 87 350 79 323 8.44e-42 150
MS.gene58775.t1 MTR_4g123080 48.765 162 74 3 226 383 110 266 5.59e-41 145
MS.gene58775.t1 MTR_3g105730 35.206 267 148 5 87 350 14 258 1.17e-40 145
MS.gene58775.t1 MTR_4g007440 32.288 319 156 5 84 352 22 330 1.17e-40 147
MS.gene58775.t1 MTR_3g105730 36.402 239 135 4 115 350 56 280 1.31e-40 145
MS.gene58775.t1 MTR_3g464650 32.090 268 152 6 93 352 71 316 6.44e-40 144
MS.gene58775.t1 MTR_1g115570 36.134 238 131 5 120 354 122 341 8.84e-40 144
MS.gene58775.t1 MTR_5g071550 37.885 227 107 6 93 310 131 332 6.15e-38 140
MS.gene58775.t1 MTR_6g081850 30.357 336 186 12 39 351 9 319 5.95e-37 136
MS.gene58775.t1 MTR_3g464700 35.242 227 119 5 93 313 95 299 8.75e-36 134
MS.gene58775.t1 MTR_3g091060 33.051 236 141 4 121 353 122 343 2.69e-35 133
MS.gene58775.t1 MTR_3g074610 33.333 282 152 11 79 351 28 282 3.32e-35 130
MS.gene58775.t1 MTR_2g008850 33.333 261 141 9 98 351 1 235 2.61e-34 127
MS.gene58775.t1 MTR_4g094208 33.077 260 143 9 98 351 43 277 3.18e-34 128
MS.gene58775.t1 MTR_2g078760 32.210 267 150 9 92 351 12 254 3.21e-33 125
MS.gene58775.t1 MTR_2g008850 33.333 261 141 9 98 351 47 281 3.46e-33 125
MS.gene58775.t1 MTR_5g063940 32.567 261 143 8 98 351 1 235 6.29e-33 123
MS.gene58775.t1 MTR_2g078760 32.210 267 150 9 92 351 91 333 1.29e-32 125
MS.gene58775.t1 MTR_1g014190 36.126 191 113 2 184 369 158 344 1.36e-32 125
MS.gene58775.t1 MTR_1g014190 36.126 191 113 2 184 369 196 382 1.54e-32 126
MS.gene58775.t1 MTR_5g063940 32.567 261 143 8 98 351 48 282 3.80e-32 122
MS.gene58775.t1 MTR_8g463130 33.195 241 138 6 117 351 31 254 4.46e-32 122
MS.gene58775.t1 MTR_8g463130 33.195 241 138 6 117 351 59 282 5.85e-32 122
MS.gene58775.t1 MTR_3g491830 29.139 302 166 8 82 347 57 346 1.24e-31 124
MS.gene58775.t1 MTR_2g040500 29.006 362 181 11 55 353 190 538 1.50e-29 120
MS.gene58775.t1 MTR_3g104710 29.618 314 159 9 93 353 238 542 1.63e-29 120
MS.gene58775.t1 MTR_1g015110 29.885 261 138 6 124 348 290 541 3.15e-29 119
MS.gene58775.t1 MTR_4g125810 29.167 312 161 11 87 352 208 505 3.53e-29 118
MS.gene58775.t1 MTR_3g105880 34.682 173 108 1 184 351 158 330 7.86e-29 115
MS.gene58775.t1 MTR_1g028300 31.579 285 157 7 84 348 111 377 2.38e-28 114
MS.gene58775.t1 MTR_4g094542 31.557 244 137 8 113 350 145 364 5.38e-28 113
MS.gene58775.t1 MTR_5g009370 31.343 268 142 8 78 320 35 285 8.33e-28 112
MS.gene58775.t1 MTR_3g068200 28.788 264 144 7 120 348 119 373 1.41e-25 107
MS.gene58775.t1 MTR_3g105880 39.552 134 81 0 184 317 158 291 2.89e-25 105
MS.gene58775.t1 MTR_5g071550 40.645 155 71 4 93 242 131 269 5.88e-25 103
MS.gene58775.t1 MTR_2g078760 33.333 219 119 8 92 303 91 289 1.62e-24 102
MS.gene58775.t1 MTR_3g105730 41.406 128 74 1 115 242 56 182 2.43e-24 100
MS.gene58775.t1 MTR_8g102550 28.794 257 143 6 122 353 150 391 2.14e-22 98.2
MS.gene58775.t1 MTR_5g080680 30.093 216 126 4 124 323 132 338 6.23e-22 96.7
MS.gene58775.t1 MTR_4g118340 30.855 269 130 12 122 348 84 338 3.23e-21 94.7
MS.gene58775.t1 MTR_2g020970 28.044 271 137 10 121 348 84 339 7.67e-21 93.2
MS.gene58775.t1 MTR_2g020970 27.473 273 140 9 119 348 82 339 2.86e-20 92.4
MS.gene58775.t1 MTR_7g100240 28.622 283 146 9 123 353 70 348 4.43e-20 90.9
MS.gene58775.t1 MTR_6g087000 27.378 347 159 14 112 383 116 444 7.36e-20 92.0
MS.gene58775.t1 MTR_6g087000 27.378 347 159 15 112 383 116 444 7.65e-20 92.0
MS.gene58775.t1 MTR_1g019760 30.916 262 134 10 123 358 64 304 1.28e-19 90.1
MS.gene58775.t1 MTR_1g019760 30.916 262 134 10 123 358 64 304 1.43e-19 90.1
MS.gene58775.t1 MTR_1g116260 26.531 294 142 11 123 355 79 359 6.64e-19 87.8
MS.gene58775.t1 MTR_8g074930 26.644 289 142 11 123 352 78 355 4.35e-18 85.5
MS.gene58775.t1 MTR_3g101540 28.676 272 145 11 116 360 56 305 6.05e-17 82.4
MS.gene58775.t1 MTR_3g101540 28.676 272 145 11 116 360 56 305 7.97e-17 82.0
MS.gene58775.t1 MTR_4g120410 26.596 282 152 10 118 354 85 356 9.17e-17 81.3
MS.gene58775.t1 MTR_3g032700 29.237 236 128 10 115 315 60 291 1.77e-16 80.9
MS.gene58775.t1 MTR_7g081020 25.796 314 153 13 123 374 75 370 3.19e-16 79.7
MS.gene58775.t1 MTR_7g090550 28.736 261 129 13 124 341 70 316 3.42e-16 80.1
MS.gene58775.t1 MTR_1g112840 26.573 286 146 11 123 352 80 357 3.96e-16 79.7
MS.gene58775.t1 MTR_1g067210 27.500 280 143 9 123 348 75 348 4.83e-16 79.3
MS.gene58775.t1 MTR_3g032660 28.814 236 129 10 115 315 60 291 4.90e-16 79.7
MS.gene58775.t1 MTR_7g090530 26.502 283 140 12 106 341 52 313 7.64e-16 79.0
MS.gene58775.t1 MTR_7g112490 27.347 245 119 8 118 312 103 338 9.86e-16 78.6
MS.gene58775.t1 MTR_7g112490 27.347 245 119 8 118 312 85 320 1.01e-15 78.2
MS.gene58775.t1 MTR_1g083690 26.882 279 151 13 118 352 83 352 1.43e-15 77.8
MS.gene58775.t1 MTR_1g110210 27.473 273 152 11 121 367 65 317 6.60e-15 75.5
MS.gene58775.t1 MTR_7g081020 27.155 232 121 9 123 314 75 298 9.18e-15 75.1
MS.gene58775.t1 MTR_7g070510 28.287 251 117 8 115 312 83 323 9.27e-15 75.9
MS.gene58775.t1 MTR_2g078760 33.987 153 88 6 92 242 91 232 1.01e-14 73.9
MS.gene58775.t1 MTR_4g013295 30.088 226 104 8 124 304 78 294 1.14e-14 75.1
MS.gene58775.t1 MTR_7g112430 30.159 252 131 10 121 348 65 295 1.49e-14 75.1
MS.gene58775.t1 MTR_2g033910 27.092 251 143 9 123 337 74 320 1.70e-14 74.7
MS.gene58775.t1 MTR_4g094208 33.108 148 86 5 98 244 43 178 2.65e-14 71.6
MS.gene58775.t1 MTR_0015s0140 25.000 292 142 11 124 353 79 355 2.95e-14 73.9
MS.gene58775.t1 MTR_8g017240 29.075 227 117 9 120 311 82 299 1.03e-13 72.4
MS.gene58775.t1 MTR_1g083750 29.084 251 135 9 121 348 65 295 1.22e-13 72.4
MS.gene58775.t1 MTR_5g080680 31.788 151 87 3 124 258 132 282 2.46e-13 70.1
MS.gene58775.t1 MTR_1g016620 25.991 227 115 7 123 307 67 282 1.20e-12 68.9
MS.gene58775.t1 MTR_5g005810 25.200 250 162 9 120 352 332 573 1.20e-12 69.7
MS.gene58775.t1 MTR_4g113345 29.918 244 139 11 115 341 53 281 1.51e-12 68.6
MS.gene58775.t1 MTR_4g113480 26.744 258 137 10 124 344 74 316 3.35e-12 68.2
MS.gene58775.t1 MTR_7g029240 28.826 281 154 15 121 378 65 322 9.30e-12 66.6
MS.gene58775.t1 MTR_7g060770 24.535 269 158 10 116 341 254 520 1.20e-11 66.6
MS.gene58775.t1 MTR_8g074930 27.189 217 100 8 186 352 35 243 2.21e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58775.t1 AT2G25620 55.556 342 137 3 44 383 60 388 4.26e-130 379
MS.gene58775.t1 AT2G25620 55.556 342 137 3 44 383 60 388 4.26e-130 379
MS.gene58775.t1 AT2G33700 54.934 304 132 2 80 383 79 377 9.54e-116 342
MS.gene58775.t1 AT3G51470 50.658 304 139 4 79 382 22 314 6.59e-103 307
MS.gene58775.t1 AT3G51470 50.658 304 139 4 79 382 66 358 1.17e-102 308
MS.gene58775.t1 AT3G62260 47.256 328 148 6 72 383 64 382 4.55e-90 276
MS.gene58775.t1 AT3G62260 47.256 328 148 6 72 383 65 383 4.89e-90 276
MS.gene58775.t1 AT1G48040 46.667 315 151 6 79 382 72 380 8.96e-87 268
MS.gene58775.t1 AT3G62260 48.344 302 131 6 98 383 1 293 1.87e-82 254
MS.gene58775.t1 AT3G17250 40.179 336 180 7 61 383 94 421 4.48e-78 247
MS.gene58775.t1 AT5G10740 37.778 270 137 6 87 350 35 279 1.19e-45 160
MS.gene58775.t1 AT5G10740 37.778 270 137 6 87 350 35 279 1.19e-45 160
MS.gene58775.t1 AT5G24940 37.037 270 139 6 87 350 35 279 1.66e-44 159
MS.gene58775.t1 AT1G07160 35.714 266 140 6 93 348 130 374 1.40e-41 150
MS.gene58775.t1 AT4G31750 36.777 242 136 4 115 353 55 282 1.00e-40 146
MS.gene58775.t1 AT4G31750 36.777 242 136 4 115 353 55 282 1.40e-40 146
MS.gene58775.t1 AT4G31750 36.777 242 136 4 115 353 55 282 1.40e-40 146
MS.gene58775.t1 AT2G30020 35.472 265 141 6 93 348 147 390 2.54e-39 144
MS.gene58775.t1 AT1G67820 37.778 225 111 5 93 310 92 294 2.86e-38 142
MS.gene58775.t1 AT1G67820 37.778 225 111 5 93 310 128 330 4.80e-38 142
MS.gene58775.t1 AT1G18030 27.945 365 220 9 10 351 5 349 7.85e-38 139
MS.gene58775.t1 AT1G78200 31.538 260 150 6 98 351 1 238 2.14e-37 135
MS.gene58775.t1 AT1G78200 31.538 260 150 6 98 351 1 238 2.14e-37 135
MS.gene58775.t1 AT1G43900 32.862 283 157 9 78 351 111 369 3.10e-37 138
MS.gene58775.t1 AT1G78200 32.308 260 148 7 98 351 46 283 1.15e-36 135
MS.gene58775.t1 AT1G78200 32.308 260 148 7 98 351 46 283 1.15e-36 135
MS.gene58775.t1 AT1G78200 32.308 260 148 7 98 351 46 283 1.15e-36 135
MS.gene58775.t1 AT5G53140 32.766 235 141 4 120 351 128 348 1.49e-36 137
MS.gene58775.t1 AT5G53140 32.766 235 141 4 120 351 128 348 1.49e-36 137
MS.gene58775.t1 AT1G22280 32.950 261 142 9 98 351 47 281 2.83e-36 134
MS.gene58775.t1 AT2G40180 33.091 275 152 7 93 355 136 390 3.98e-36 136
MS.gene58775.t1 AT2G40860 32.155 283 155 8 80 348 289 548 1.08e-34 134
MS.gene58775.t1 AT2G40860 32.155 283 155 8 80 348 387 646 1.14e-34 135
MS.gene58775.t1 AT2G20630 32.210 267 143 10 94 351 42 279 2.98e-34 128
MS.gene58775.t1 AT2G20630 31.955 266 143 10 94 350 42 278 4.77e-34 128
MS.gene58775.t1 AT1G22280 32.210 267 142 10 98 351 47 287 8.64e-34 127
MS.gene58775.t1 AT4G28400 33.891 239 129 7 122 351 43 261 4.60e-33 124
MS.gene58775.t1 AT4G28400 33.891 239 129 7 122 351 65 283 1.00e-32 124
MS.gene58775.t1 AT2G25070 36.723 177 107 1 184 355 158 334 1.13e-32 125
MS.gene58775.t1 AT2G25070 36.723 177 107 1 184 355 158 334 1.13e-32 125
MS.gene58775.t1 AT1G34750 31.439 264 137 8 111 348 34 279 4.02e-32 122
MS.gene58775.t1 AT1G34750 31.439 264 137 8 111 348 34 279 4.02e-32 122
MS.gene58775.t1 AT1G34750 31.439 264 137 8 111 348 34 279 4.02e-32 122
MS.gene58775.t1 AT4G27800 26.765 340 202 7 68 372 43 370 3.12e-31 122
MS.gene58775.t1 AT4G31860 35.028 177 110 1 184 355 158 334 5.63e-31 121
MS.gene58775.t1 AT3G15260 33.610 241 137 6 117 351 66 289 6.56e-31 119
MS.gene58775.t1 AT3G15260 33.610 241 137 6 117 351 66 289 6.56e-31 119
MS.gene58775.t1 AT2G34740 31.780 236 136 8 122 350 117 334 1.34e-30 120
MS.gene58775.t1 AT2G40860 31.250 272 150 8 80 337 387 635 5.84e-30 122
MS.gene58775.t1 AT4G26080 29.114 316 169 8 75 348 118 420 5.68e-29 117
MS.gene58775.t1 AT1G18030 27.532 316 187 8 10 303 5 300 1.20e-28 114
MS.gene58775.t1 AT5G51760 29.450 309 156 7 90 348 83 379 4.49e-28 114
MS.gene58775.t1 AT4G31860 29.545 264 130 4 84 301 22 275 5.29e-28 111
MS.gene58775.t1 AT5G51760 29.568 301 150 7 98 348 121 409 7.34e-28 114
MS.gene58775.t1 AT4G27800 27.517 298 169 7 68 330 43 328 1.51e-27 111
MS.gene58775.t1 AT4G27800 27.797 295 166 7 68 327 43 325 2.02e-27 111
MS.gene58775.t1 AT1G17550 27.798 277 144 6 124 353 237 504 3.19e-27 113
MS.gene58775.t1 AT1G17550 27.798 277 144 6 124 353 237 504 3.19e-27 113
MS.gene58775.t1 AT2G29380 31.518 257 134 9 124 348 112 358 1.92e-26 108
MS.gene58775.t1 AT1G07430 32.692 208 114 5 124 314 157 355 2.00e-26 110
MS.gene58775.t1 AT4G31860 40.299 134 80 0 184 317 158 291 2.25e-26 107
MS.gene58775.t1 AT1G72770 27.174 276 146 6 124 353 238 504 4.32e-26 109
MS.gene58775.t1 AT1G72770 27.174 276 146 6 124 353 238 504 4.32e-26 109
MS.gene58775.t1 AT1G72770 27.174 276 146 6 124 353 238 504 4.32e-26 109
MS.gene58775.t1 AT5G57050 27.532 316 192 8 49 338 33 337 4.37e-26 108
MS.gene58775.t1 AT5G57050 30.568 229 134 5 124 338 160 377 7.05e-26 108
MS.gene58775.t1 AT4G28400 35.079 191 99 6 122 303 65 239 4.26e-25 103
MS.gene58775.t1 AT2G34740 33.862 189 104 7 122 303 113 287 2.31e-24 102
MS.gene58775.t1 AT2G34740 33.862 189 104 7 122 303 131 305 3.03e-24 102
MS.gene58775.t1 AT1G34750 31.507 219 110 7 111 303 34 238 9.74e-24 99.0
MS.gene58775.t1 AT3G11410 30.556 216 116 5 124 314 137 343 1.50e-23 101
MS.gene58775.t1 AT5G59220 32.057 209 119 4 124 318 148 347 1.92e-23 101
MS.gene58775.t1 AT2G20050 29.054 296 138 13 124 361 143 424 6.44e-23 101
MS.gene58775.t1 AT2G20050 29.054 296 138 13 124 361 143 424 6.63e-23 101
MS.gene58775.t1 AT4G08260 31.897 232 117 7 119 348 14 206 2.71e-22 94.4
MS.gene58775.t1 AT2G40860 31.441 229 123 7 80 294 387 595 3.12e-22 99.0
MS.gene58775.t1 AT5G02760 28.975 283 145 10 123 354 71 348 1.29e-21 95.5
MS.gene58775.t1 AT3G16800 30.147 272 143 11 118 351 87 349 4.94e-20 90.9
MS.gene58775.t1 AT3G16800 30.147 272 143 11 118 351 87 349 4.94e-20 90.9
MS.gene58775.t1 AT3G16800 30.147 272 143 11 118 351 87 349 4.94e-20 90.9
MS.gene58775.t1 AT3G06270 27.407 270 138 10 122 348 86 340 6.76e-20 90.5
MS.gene58775.t1 AT3G27140 28.455 246 110 6 119 362 14 195 3.68e-18 83.6
MS.gene58775.t1 AT1G47380 28.819 288 153 12 121 384 61 320 4.06e-18 85.9
MS.gene58775.t1 AT1G09160 30.147 272 140 11 121 363 65 315 1.01e-17 84.7
MS.gene58775.t1 AT1G09160 30.147 272 140 11 121 363 65 315 1.01e-17 84.7
MS.gene58775.t1 AT3G51370 26.645 304 144 13 123 360 78 368 1.48e-17 84.0
MS.gene58775.t1 AT3G51370 26.645 304 144 13 123 360 78 368 1.48e-17 84.0
MS.gene58775.t1 AT4G32950 26.207 290 171 10 93 356 50 322 2.42e-17 82.8
MS.gene58775.t1 AT3G16800 29.278 263 139 11 127 351 1 254 4.06e-17 80.9
MS.gene58775.t1 AT3G16800 29.278 263 139 11 127 351 1 254 4.06e-17 80.9
MS.gene58775.t1 AT1G22280 32.215 149 86 5 98 244 47 182 5.64e-17 79.0
MS.gene58775.t1 AT5G57050 32.450 151 86 4 124 260 160 308 9.86e-17 80.5
MS.gene58775.t1 AT4G38520 26.573 286 146 9 123 352 80 357 9.94e-17 81.6
MS.gene58775.t1 AT4G38520 26.573 286 146 9 123 352 80 357 9.94e-17 81.6
MS.gene58775.t1 AT3G12620 26.712 292 140 11 123 353 82 360 1.36e-16 80.9
MS.gene58775.t1 AT3G12620 26.712 292 140 11 123 353 82 360 1.36e-16 80.9
MS.gene58775.t1 AT3G05640 26.374 273 153 10 118 351 87 350 3.93e-16 79.3
MS.gene58775.t1 AT3G05640 26.374 273 153 10 118 351 87 350 3.93e-16 79.3
MS.gene58775.t1 AT3G05640 26.374 273 153 10 118 351 87 350 3.93e-16 79.3
MS.gene58775.t1 AT5G66080 27.668 253 138 11 123 337 81 326 1.12e-15 78.2
MS.gene58775.t1 AT3G55050 27.273 286 144 11 123 352 83 360 1.55e-15 77.8
MS.gene58775.t1 AT3G55050 27.273 286 144 11 123 352 83 360 1.55e-15 77.8
MS.gene58775.t1 AT5G59220 34.000 150 85 3 124 259 148 297 3.62e-15 75.9
MS.gene58775.t1 AT1G72770 30.488 164 85 3 124 258 238 401 1.17e-13 72.4
MS.gene58775.t1 AT1G72770 30.488 164 85 3 124 258 238 401 1.17e-13 72.4
MS.gene58775.t1 AT5G19280 27.757 263 152 11 109 352 336 579 3.80e-13 71.2
MS.gene58775.t1 AT3G16560 28.977 176 96 6 162 310 247 420 6.96e-13 70.1
MS.gene58775.t1 AT3G16560 28.977 176 96 6 162 310 247 420 7.59e-13 70.1
MS.gene58775.t1 AT3G16560 28.977 176 96 6 162 310 247 420 7.59e-13 70.1
MS.gene58775.t1 AT3G16560 28.977 176 96 6 162 310 247 420 7.59e-13 70.1
MS.gene58775.t1 AT4G32950 28.571 231 125 9 93 300 50 263 7.70e-13 68.9
MS.gene58775.t1 AT5G26010 24.290 317 175 11 81 356 38 330 1.17e-12 68.9
MS.gene58775.t1 AT5G01700 27.155 232 119 8 119 310 24 245 5.17e-12 67.0
MS.gene58775.t1 AT5G01700 27.155 232 119 8 119 310 73 294 8.96e-12 66.6
MS.gene58775.t1 AT5G27930 30.088 226 105 11 118 300 86 301 3.38e-11 64.3
MS.gene58775.t1 AT1G79630 29.714 175 96 5 156 312 83 248 6.88e-11 63.9
MS.gene58775.t1 AT1G79630 29.714 175 96 5 156 312 83 248 6.88e-11 63.9
MS.gene58775.t1 AT1G79630 29.714 175 96 5 156 312 83 248 6.88e-11 63.9
MS.gene58775.t1 AT1G79630 29.714 175 96 5 156 312 83 248 6.88e-11 63.9
MS.gene58775.t1 AT1G79630 29.714 175 96 5 156 312 123 288 8.20e-11 63.5
MS.gene58775.t1 AT1G79630 29.714 175 96 5 156 312 123 288 8.20e-11 63.5

Find 89 sgRNAs with CRISPR-Local

Find 163 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTGACTGCAATTATATT+TGG 0.173522 8.3:-9513750 MS.gene58775:CDS
GAGGACTTGGCAAAGAAATT+TGG 0.243759 8.3:-9514171 MS.gene58775:CDS
ATTGAGTCTTCCCTGTCTTC+TGG 0.285045 8.3:-9513780 MS.gene58775:CDS
TAATTGGAAGTGATGGAATA+TGG 0.292557 8.3:-9513135 MS.gene58775:CDS
TAGATGGCATACACCATAAA+AGG 0.303590 8.3:+9514119 None:intergenic
ATCCTTTCTTTCATGCATAA+AGG 0.303955 8.3:+9513340 None:intergenic
ACACTAACAGGAAATGAATT+AGG 0.317080 8.3:+9515078 None:intergenic
TAGCAAAATCTACAGCGTTT+TGG 0.332140 8.3:+9513098 None:intergenic
GCATAAAGGCCTATGATCTT+TGG 0.333154 8.3:+9513354 None:intergenic
TAGCCAATGCCGGGGACTGC+AGG 0.348722 8.3:-9513414 MS.gene58775:CDS
TGATCAAGATAATAATAATA+TGG 0.349493 8.3:-9515217 MS.gene58775:CDS
GTGTAGGGACGAAATTTATC+AGG 0.353257 8.3:+9514259 None:intergenic
CAATGTTGCAAGGAAATAAT+AGG 0.358586 8.3:-9513043 MS.gene58775:CDS
TTGATAACAGAAGGATTTCA+TGG 0.366492 8.3:-9515188 MS.gene58775:CDS
ATCAGAACCACCACCACCTT+TGG 0.374581 8.3:-9512963 MS.gene58775:CDS
ATTGATGATGGTTACTTGAA+TGG 0.410247 8.3:-9513292 MS.gene58775:CDS
ATGCTTCTCCTGACTCTGTT+AGG 0.416065 8.3:+9512929 None:intergenic
GAATAATCTATCTTTCTAAC+AGG 0.434832 8.3:+9512876 None:intergenic
TTCTATTACCCCTCCAGCTC+GGG 0.442074 8.3:+9513381 None:intergenic
TATTCTGTGCAGGTATTTGA+TGG 0.443156 8.3:-9513948 MS.gene58775:intron
TTCGTCCCTACACTTCGGTC+GGG 0.443590 8.3:-9514249 MS.gene58775:CDS
ATGTGAGTATCCTCCATGTA+AGG 0.444464 8.3:+9514201 None:intergenic
TCACATATGCATTGAGGACT+TGG 0.445711 8.3:-9514184 MS.gene58775:CDS
ATGAATTAGGAGCACTGATC+TGG 0.445790 8.3:+9515091 None:intergenic
CTTTACTTGTAGCCAATGCC+GGG 0.446990 8.3:-9513423 MS.gene58775:CDS
AAGGAAGTGAGTGGAAGAAA+TGG 0.449462 8.3:-9513220 MS.gene58775:CDS
TCGTCCCTACACTTCGGTCG+GGG 0.449528 8.3:-9514248 MS.gene58775:CDS
CACCACCTTTGGTTGTTGAA+AGG 0.451444 8.3:-9512952 MS.gene58775:CDS
AGTTCTGGCTCAGCACTTAG+TGG 0.454686 8.3:+9513196 None:intergenic
AGCCCTGCAGTCCCCGGCAT+TGG 0.455154 8.3:+9513411 None:intergenic
TCTTTACTTGTAGCCAATGC+CGG 0.457915 8.3:-9513424 MS.gene58775:CDS
TGACGCGGGCTCTAGGCAAC+TGG 0.460183 8.3:-9513258 MS.gene58775:CDS
CTAGGCGTGACGCGGGCTCT+AGG 0.463224 8.3:-9513265 MS.gene58775:CDS
TTGAAAGGCCTAACAGAGTC+AGG 0.464128 8.3:-9512937 MS.gene58775:CDS
AATGTCATCAATTTAAGTTC+TGG 0.464919 8.3:+9513181 None:intergenic
TATTGGAGGTCGCCCTTACA+TGG 0.466728 8.3:-9514214 MS.gene58775:CDS
CTTGGCGGATTTATTGATGA+TGG 0.469287 8.3:-9513304 MS.gene58775:CDS
TAGAATTGTCCAAAGATCAT+AGG 0.470481 8.3:-9513363 MS.gene58775:CDS
CTAGGCAACTGGCATCTTGA+AGG 0.481839 8.3:-9513247 MS.gene58775:CDS
GGCCTTTATGCATGAAAGAA+AGG 0.485159 8.3:-9513342 MS.gene58775:CDS
AGATAATTTAACTGTTGTGT+TGG 0.505944 8.3:-9512996 MS.gene58775:CDS
CAAAACAGCCCTGCAGTCCC+CGG 0.507129 8.3:+9513405 None:intergenic
TTTCGTCCCTACACTTCGGT+CGG 0.508489 8.3:-9514250 MS.gene58775:CDS
AAGCAGTTGTACCAGAAGAC+AGG 0.513476 8.3:+9513769 None:intergenic
CTGGCATCTTGAAGGAATGA+AGG 0.515181 8.3:-9513239 MS.gene58775:CDS
TCAACAACCAAAGGTGGTGG+TGG 0.531756 8.3:+9512956 None:intergenic
AATTGGAAGTGATGGAATAT+GGG 0.533968 8.3:-9513134 MS.gene58775:CDS
TGACTGCAATTATATTTGGA+AGG 0.542508 8.3:-9513746 MS.gene58775:intron
AGGAGCACTGATCTGGTCAC+TGG 0.548106 8.3:+9515098 None:intergenic
AGCCAATGCCGGGGACTGCA+GGG 0.552576 8.3:-9513413 MS.gene58775:CDS
TTGTTCGCGATCATCTGCCG+AGG 0.564331 8.3:-9513899 MS.gene58775:CDS
TGGAGAAACTTGATAACAGA+AGG 0.570639 8.3:-9515197 MS.gene58775:CDS
TATGCATGAAAGAAAGGATG+AGG 0.570968 8.3:-9513336 MS.gene58775:CDS
ATTCTATTACCCCTCCAGCT+CGG 0.573089 8.3:+9513380 None:intergenic
CTTCCCTCTTGAACTCGAGA+AGG 0.574740 8.3:-9513856 MS.gene58775:CDS
ATGAGGATCGAGTCTCTTGG+CGG 0.579884 8.3:-9513319 MS.gene58775:CDS
CGTCCCTACACTTCGGTCGG+GGG 0.582208 8.3:-9514247 MS.gene58775:CDS
GTGCAGGTATTTGATGGACA+TGG 0.586679 8.3:-9513942 MS.gene58775:intron
TTAGGCCTTTCAACAACCAA+AGG 0.587308 8.3:+9512947 None:intergenic
ACCACCTTCTCGAGTTCAAG+AGG 0.589310 8.3:+9513852 None:intergenic
AGGATGAGGATCGAGTCTCT+TGG 0.591958 8.3:-9513322 MS.gene58775:CDS
TGGACAGCTAGGCGTGACGC+GGG 0.593529 8.3:-9513272 MS.gene58775:CDS
AACTCGAGAAGGTGGTCACA+AGG 0.594388 8.3:-9513845 MS.gene58775:CDS
CTTTCAACAACCAAAGGTGG+TGG 0.598090 8.3:+9512953 None:intergenic
CAGGAGAAGCATATCTGCTG+AGG 0.600005 8.3:-9512918 MS.gene58775:CDS
CCCTCTTGAACTCGAGAAGG+TGG 0.601383 8.3:-9513853 MS.gene58775:CDS
AGCAGTTGTACCAGAAGACA+GGG 0.602803 8.3:+9513770 None:intergenic
TGCAAAAGATCACAATGCAA+TGG 0.604015 8.3:+9515165 None:intergenic
ATGGACAGCTAGGCGTGACG+CGG 0.605836 8.3:-9513273 MS.gene58775:CDS
GCATCCTCAACAATCACCCT+CGG 0.609381 8.3:+9513882 None:intergenic
GGTTACTTGAATGGACAGCT+AGG 0.611625 8.3:-9513283 MS.gene58775:CDS
GGCCTTTCAACAACCAAAGG+TGG 0.612573 8.3:+9512950 None:intergenic
TAAATTTCGTCCCTACACTT+CGG 0.613927 8.3:-9514254 MS.gene58775:CDS
GAAGGAATGAAGGAAGTGAG+TGG 0.614412 8.3:-9513229 MS.gene58775:CDS
TTAGCTGGAAAGCATTTGTG+AGG 0.615709 8.3:-9514310 MS.gene58775:intron
AGGAGAAGCATATCTGCTGA+GGG 0.620558 8.3:-9512917 MS.gene58775:CDS
GGGGAGTGGTCTGATATTGG+AGG 0.624136 8.3:-9514228 MS.gene58775:CDS
TGTTCGCGATCATCTGCCGA+GGG 0.626852 8.3:-9513898 MS.gene58775:CDS
TGTGAGTATCCTCCATGTAA+GGG 0.630192 8.3:+9514202 None:intergenic
GTCAACATGTGTGTGCAAGA+AGG 0.652909 8.3:-9515249 None:intergenic
GGATACTCACATATGCATTG+AGG 0.657144 8.3:-9514190 MS.gene58775:CDS
TGATGTGAAACAATGTTGCA+AGG 0.658172 8.3:-9513053 MS.gene58775:CDS
CCACCTTCTCGAGTTCAAGA+GGG 0.662371 8.3:+9513853 None:intergenic
TTTACTTGTAGCCAATGCCG+GGG 0.668453 8.3:-9513422 MS.gene58775:CDS
AGGTATTTGATGGACATGGA+GGG 0.676243 8.3:-9513938 MS.gene58775:CDS
TCTGCCGAGGGTGATTGTTG+AGG 0.686396 8.3:-9513886 MS.gene58775:CDS
CAGGTATTTGATGGACATGG+AGG 0.705749 8.3:-9513939 MS.gene58775:CDS
TGGAGGTCGCCCTTACATGG+AGG 0.715266 8.3:-9514211 MS.gene58775:CDS
ATAGGCGAAGCAATAAAGCG+AGG 0.718434 8.3:-9513025 MS.gene58775:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAATGATAATTAAACA+AGG + chr8.3:9514672-9514691 None:intergenic 10.0%
!! AAAGAATAATAATTTCTAAT+GGG - chr8.3:9514581-9514600 MS.gene58775:intron 10.0%
!!! AAATGAAATTATGATTTTTA+AGG - chr8.3:9513603-9513622 MS.gene58775:intron 10.0%
!!! AATGAAATTATGATTTTTAA+GGG - chr8.3:9513604-9513623 MS.gene58775:intron 10.0%
!! GAAAGAATAATAATTTCTAA+TGG - chr8.3:9514580-9514599 MS.gene58775:intron 15.0%
!! TAATCATGATTTAACATTAA+AGG - chr8.3:9514148-9514167 MS.gene58775:CDS 15.0%
!! TGATCAAGATAATAATAATA+TGG - chr8.3:9512909-9512928 MS.gene58775:CDS 15.0%
!!! AGATAAGAATTTAAAACAAA+AGG + chr8.3:9513508-9513527 None:intergenic 15.0%
!!! CTTTTTTCTAAATTTGAAAT+TGG - chr8.3:9513534-9513553 MS.gene58775:intron 15.0%
!! AAAAGAAAATTTATGACAAC+AGG + chr8.3:9514050-9514069 None:intergenic 20.0%
!! AATGCATAATTAAGCAATTA+AGG + chr8.3:9513464-9513483 None:intergenic 20.0%
!! CTAGCTTATAATATAACATA+GGG + chr8.3:9513141-9513160 None:intergenic 20.0%
!! TAGCTTATAATATAACATAG+GGG + chr8.3:9513140-9513159 None:intergenic 20.0%
!!! AATAAAAATATTGACTGCTA+CGG - chr8.3:9514528-9514547 MS.gene58775:intron 20.0%
!!! ACTAGCTTATAATATAACAT+AGG + chr8.3:9513142-9513161 None:intergenic 20.0%
!!! ATGGTCTTATGATTATAAAA+TGG + chr8.3:9514432-9514451 None:intergenic 20.0%
!!! CATTTTTGTGATTATAAGAT+AGG - chr8.3:9514091-9514110 MS.gene58775:intron 20.0%
!!! GTTATATTATAAGCTAGTTT+TGG - chr8.3:9513144-9513163 MS.gene58775:CDS 20.0%
!!! TAGTTTTGGATTTTTTAAGA+TGG - chr8.3:9513158-9513177 MS.gene58775:CDS 20.0%
! AAGTATAATGAAAGTCTAAG+AGG + chr8.3:9513197-9513216 None:intergenic 25.0%
! ACATATCTAAGAGAATTTCA+AGG + chr8.3:9513638-9513657 None:intergenic 25.0%
! AGATAATTTAACTGTTGTGT+TGG - chr8.3:9515130-9515149 MS.gene58775:CDS 25.0%
! AGTTAACAAAATCAGTTAGA+TGG + chr8.3:9514026-9514045 None:intergenic 25.0%
! CTAATCACATCTTATATCAA+AGG + chr8.3:9513687-9513706 None:intergenic 25.0%
! CTTAGACTTTCATTATACTT+AGG - chr8.3:9513197-9513216 MS.gene58775:CDS 25.0%
! GAAAATTGCATTCATAACAA+AGG - chr8.3:9514113-9514132 MS.gene58775:intron 25.0%
! GAAGAAAAGAAGAACAAAAA+TGG + chr8.3:9513118-9513137 None:intergenic 25.0%
! GATTATAAAATGGCAAAGAA+TGG + chr8.3:9514422-9514441 None:intergenic 25.0%
! GATTTAACATTAAAGGCAAA+TGG - chr8.3:9514155-9514174 MS.gene58775:CDS 25.0%
! TTAAGTTATTTATCCAAACC+AGG - chr8.3:9513438-9513457 MS.gene58775:intron 25.0%
!! AATGTCATCAATTTAAGTTC+TGG + chr8.3:9514948-9514967 None:intergenic 25.0%
!! ATAAAAATATTGACTGCTAC+GGG - chr8.3:9514529-9514548 MS.gene58775:intron 25.0%
!! ATAATCATAAGACCATTTTG+TGG - chr8.3:9514436-9514455 MS.gene58775:intron 25.0%
!! TTATCATTATTTTCCTGTAC+AGG - chr8.3:9514679-9514698 MS.gene58775:intron 25.0%
!!! ATTTTTATTTGTGTCGTGTT+CGG + chr8.3:9514517-9514536 None:intergenic 25.0%
!!! TTTAAGATGGTTTTCCAATA+AGG - chr8.3:9513171-9513190 MS.gene58775:CDS 25.0%
!!! TTTCTTTGCATTATTTTAGC+TGG - chr8.3:9513801-9513820 MS.gene58775:CDS 25.0%
!!! TTTTTGATAATTGGAAGTGA+TGG - chr8.3:9514984-9515003 MS.gene58775:intron 25.0%
ACAAAAATGGCATAACAAGA+AGG + chr8.3:9513105-9513124 None:intergenic 30.0%
ACAAAAGAAAGAGAAGATGA+AGG + chr8.3:9513081-9513100 None:intergenic 30.0%
ACACTAACAGGAAATGAATT+AGG + chr8.3:9513051-9513070 None:intergenic 30.0%
ATAATTAAGCAATTAAGGCC+TGG + chr8.3:9513459-9513478 None:intergenic 30.0%
ATCAGCTGAAAACAACTTAT+AGG + chr8.3:9513308-9513327 None:intergenic 30.0%
ATCCTTTCTTTCATGCATAA+AGG + chr8.3:9514789-9514808 None:intergenic 30.0%
CAATGTTGCAAGGAAATAAT+AGG - chr8.3:9515083-9515102 MS.gene58775:intron 30.0%
GCTTTGACTGCAATTATATT+TGG - chr8.3:9514376-9514395 MS.gene58775:intron 30.0%
TAGAATTGTCCAAAGATCAT+AGG - chr8.3:9514763-9514782 MS.gene58775:intron 30.0%
TATAAAATGGCAAAGAATGG+TGG + chr8.3:9514419-9514438 None:intergenic 30.0%
TGACTGCAATTATATTTGGA+AGG - chr8.3:9514380-9514399 MS.gene58775:intron 30.0%
! AATTGGAAGTGATGGAATAT+GGG - chr8.3:9514992-9515011 MS.gene58775:intron 30.0%
! GATTGACTTATTTGAACCTA+TGG - chr8.3:9513229-9513248 MS.gene58775:CDS 30.0%
! TAATTGGAAGTGATGGAATA+TGG - chr8.3:9514991-9515010 MS.gene58775:intron 30.0%
! TTGATAACAGAAGGATTTCA+TGG - chr8.3:9512938-9512957 MS.gene58775:CDS 30.0%
!! ATAAGATGTGATTAGTCTCT+AGG - chr8.3:9513692-9513711 MS.gene58775:intron 30.0%
!! ATTGATGATGGTTACTTGAA+TGG - chr8.3:9514834-9514853 MS.gene58775:intron 30.0%
!! TAAGATGTGATTAGTCTCTA+GGG - chr8.3:9513693-9513712 MS.gene58775:intron 30.0%
!! TTCATAAGTGTTTTTGCCAT+AGG + chr8.3:9513248-9513267 None:intergenic 30.0%
CAACACGACTATAACTCTAA+TGG + chr8.3:9514558-9514577 None:intergenic 35.0%
CATTAGAGTTATAGTCGTGT+TGG - chr8.3:9514556-9514575 MS.gene58775:intron 35.0%
GAAGGAAATCAAACACTAAC+AGG + chr8.3:9513063-9513082 None:intergenic 35.0%
TAAATTTCGTCCCTACACTT+CGG - chr8.3:9513872-9513891 MS.gene58775:CDS 35.0%
TAGATGGCATACACCATAAA+AGG + chr8.3:9514010-9514029 None:intergenic 35.0%
TATGATTGTATGCATTCCCT+AGG + chr8.3:9514646-9514665 None:intergenic 35.0%
TATGCATGAAAGAAAGGATG+AGG - chr8.3:9514790-9514809 MS.gene58775:intron 35.0%
TATTCTGTGCAGGTATTTGA+TGG - chr8.3:9514178-9514197 MS.gene58775:CDS 35.0%
TGATGTGAAACAATGTTGCA+AGG - chr8.3:9515073-9515092 MS.gene58775:intron 35.0%
TGCAAAAGATCACAATGCAA+TGG + chr8.3:9512964-9512983 None:intergenic 35.0%
! AGCTTGTCAAGATAGCTTTA+TGG - chr8.3:9513335-9513354 MS.gene58775:CDS 35.0%
! TAGCAAAATCTACAGCGTTT+TGG + chr8.3:9515031-9515050 None:intergenic 35.0%
! TGATCTTTTGCATGCTCAAA+TGG - chr8.3:9512972-9512991 MS.gene58775:CDS 35.0%
! TGGAGAAACTTGATAACAGA+AGG - chr8.3:9512929-9512948 MS.gene58775:CDS 35.0%
!! ACACATGTCGTTATTTTCCT+AGG - chr8.3:9514626-9514645 MS.gene58775:intron 35.0%
!! CACATGTCGTTATTTTCCTA+GGG - chr8.3:9514627-9514646 MS.gene58775:intron 35.0%
!! GACGAAGCTATTTCCTTTTA+TGG - chr8.3:9513994-9514013 MS.gene58775:intron 35.0%
!! GACGACGAGTTTTTGATAAT+TGG - chr8.3:9514975-9514994 MS.gene58775:intron 35.0%
AAGGAAGTGAGTGGAAGAAA+TGG - chr8.3:9514906-9514925 MS.gene58775:intron 40.0%
ATGTGAGTATCCTCCATGTA+AGG + chr8.3:9513928-9513947 None:intergenic 40.0%
CTACAAGTAAAGACCTGTAC+AGG + chr8.3:9514695-9514714 None:intergenic 40.0%
GAGGACTTGGCAAAGAAATT+TGG - chr8.3:9513955-9513974 MS.gene58775:intron 40.0%
GCATAAAGGCCTATGATCTT+TGG + chr8.3:9514775-9514794 None:intergenic 40.0%
GGATACTCACATATGCATTG+AGG - chr8.3:9513936-9513955 MS.gene58775:CDS 40.0%
GGCCTTTATGCATGAAAGAA+AGG - chr8.3:9514784-9514803 MS.gene58775:intron 40.0%
GTGTAGGGACGAAATTTATC+AGG + chr8.3:9513870-9513889 None:intergenic 40.0%
TAAGCAATTAAGGCCTGGTT+TGG + chr8.3:9513454-9513473 None:intergenic 40.0%
TCACATATGCATTGAGGACT+TGG - chr8.3:9513942-9513961 MS.gene58775:intron 40.0%
TCTTTACTTGTAGCCAATGC+CGG - chr8.3:9514702-9514721 MS.gene58775:intron 40.0%
TGTGAGTATCCTCCATGTAA+GGG + chr8.3:9513927-9513946 None:intergenic 40.0%
TTAGGCCTTTCAACAACCAA+AGG + chr8.3:9515182-9515201 None:intergenic 40.0%
! ACGCTGTAGATTTTGCTAGA+AGG - chr8.3:9515033-9515052 MS.gene58775:intron 40.0%
! AGGTATTTGATGGACATGGA+GGG - chr8.3:9514188-9514207 MS.gene58775:CDS 40.0%
! CTGTAGATTTTGCTAGAAGG+AGG - chr8.3:9515036-9515055 MS.gene58775:intron 40.0%
! GAAAGTCTAAGAGGCCTTAT+TGG + chr8.3:9513188-9513207 None:intergenic 40.0%
!! ATGAATTAGGAGCACTGATC+TGG + chr8.3:9513038-9513057 None:intergenic 40.0%
!! CTTGGCGGATTTATTGATGA+TGG - chr8.3:9514822-9514841 MS.gene58775:intron 40.0%
!! TTAGCTGGAAAGCATTTGTG+AGG - chr8.3:9513816-9513835 MS.gene58775:CDS 40.0%
AAGCAGTTGTACCAGAAGAC+AGG + chr8.3:9514360-9514379 None:intergenic 45.0%
AGCAGTTGTACCAGAAGACA+GGG + chr8.3:9514359-9514378 None:intergenic 45.0%
AGGCAAATGGTATTCTGTGC+AGG - chr8.3:9514168-9514187 MS.gene58775:CDS 45.0%
ATAGGCGAAGCAATAAAGCG+AGG - chr8.3:9515101-9515120 MS.gene58775:CDS 45.0%
ATGCTTCTCCTGACTCTGTT+AGG + chr8.3:9515200-9515219 None:intergenic 45.0%
ATTCTATTACCCCTCCAGCT+CGG + chr8.3:9514749-9514768 None:intergenic 45.0%
ATTGAGTCTTCCCTGTCTTC+TGG - chr8.3:9514346-9514365 MS.gene58775:intron 45.0%
CACCACCTTTGGTTGTTGAA+AGG - chr8.3:9515174-9515193 MS.gene58775:CDS 45.0%
CTGGCATCTTGAAGGAATGA+AGG - chr8.3:9514887-9514906 MS.gene58775:intron 45.0%
CTTTACTTGTAGCCAATGCC+GGG - chr8.3:9514703-9514722 MS.gene58775:intron 45.0%
CTTTCAACAACCAAAGGTGG+TGG + chr8.3:9515176-9515195 None:intergenic 45.0%
GAAGGAATGAAGGAAGTGAG+TGG - chr8.3:9514897-9514916 MS.gene58775:intron 45.0%
GGTTACTTGAATGGACAGCT+AGG - chr8.3:9514843-9514862 MS.gene58775:intron 45.0%
GTGTCAGACATCTCGTTTAG+AGG + chr8.3:9514610-9514629 None:intergenic 45.0%
TGTTCGGTATCTGTGCATCT+TGG + chr8.3:9514501-9514520 None:intergenic 45.0%
TTGAAAGGCCTAACAGAGTC+AGG - chr8.3:9515189-9515208 MS.gene58775:CDS 45.0%
TTGTGCGACTCTCCACAAAA+TGG + chr8.3:9514451-9514470 None:intergenic 45.0%
TTTACTTGTAGCCAATGCCG+GGG - chr8.3:9514704-9514723 MS.gene58775:intron 45.0%
! AGGAGAAGCATATCTGCTGA+GGG - chr8.3:9515209-9515228 MS.gene58775:CDS 45.0%
! CAGGTATTTGATGGACATGG+AGG - chr8.3:9514187-9514206 MS.gene58775:CDS 45.0%
! GTGCAGGTATTTGATGGACA+TGG - chr8.3:9514184-9514203 MS.gene58775:CDS 45.0%
!! GGTGGTCACAAGGTCATTTT+TGG - chr8.3:9514291-9514310 MS.gene58775:CDS 45.0%
AACTCGAGAAGGTGGTCACA+AGG - chr8.3:9514281-9514300 MS.gene58775:CDS 50.0%
ACCACCTTCTCGAGTTCAAG+AGG + chr8.3:9514277-9514296 None:intergenic 50.0%
AGGATGAGGATCGAGTCTCT+TGG - chr8.3:9514804-9514823 MS.gene58775:intron 50.0%
ATCAGAACCACCACCACCTT+TGG - chr8.3:9515163-9515182 MS.gene58775:CDS 50.0%
ATGAGGATCGAGTCTCTTGG+CGG - chr8.3:9514807-9514826 MS.gene58775:intron 50.0%
CCACCTTCTCGAGTTCAAGA+GGG + chr8.3:9514276-9514295 None:intergenic 50.0%
CTAGGCAACTGGCATCTTGA+AGG - chr8.3:9514879-9514898 MS.gene58775:intron 50.0%
CTTCCCTCTTGAACTCGAGA+AGG - chr8.3:9514270-9514289 MS.gene58775:CDS 50.0%
GCATCCTCAACAATCACCCT+CGG + chr8.3:9514247-9514266 None:intergenic 50.0%
GGCCTTTCAACAACCAAAGG+TGG + chr8.3:9515179-9515198 None:intergenic 50.0%
GGTATCTGTGCATCTTGGCT+AGG + chr8.3:9514496-9514515 None:intergenic 50.0%
GTGGAGAGTCGCACAACTTT+GGG - chr8.3:9514455-9514474 MS.gene58775:intron 50.0%
TATTGGAGGTCGCCCTTACA+TGG - chr8.3:9513912-9513931 MS.gene58775:CDS 50.0%
TGTGGAGAGTCGCACAACTT+TGG - chr8.3:9514454-9514473 MS.gene58775:intron 50.0%
TTCTATTACCCCTCCAGCTC+GGG + chr8.3:9514748-9514767 None:intergenic 50.0%
TTTCGTCCCTACACTTCGGT+CGG - chr8.3:9513876-9513895 MS.gene58775:CDS 50.0%
! CAGGAGAAGCATATCTGCTG+AGG - chr8.3:9515208-9515227 MS.gene58775:CDS 50.0%
! TCAACAACCAAAGGTGGTGG+TGG + chr8.3:9515173-9515192 None:intergenic 50.0%
!! AGTTCTGGCTCAGCACTTAG+TGG + chr8.3:9514933-9514952 None:intergenic 50.0%
CCCTCTTGAACTCGAGAAGG+TGG - chr8.3:9514273-9514292 MS.gene58775:CDS 55.0%
GAGTCGCACAACTTTGGGTC+AGG - chr8.3:9514460-9514479 MS.gene58775:intron 55.0%
GGGGAGTGGTCTGATATTGG+AGG - chr8.3:9513898-9513917 MS.gene58775:CDS 55.0%
TCGGGGGAGTGGTCTGATAT+TGG - chr8.3:9513895-9513914 MS.gene58775:CDS 55.0%
TCTGCCGAGGGTGATTGTTG+AGG - chr8.3:9514240-9514259 MS.gene58775:CDS 55.0%
TGTTCGCGATCATCTGCCGA+GGG - chr8.3:9514228-9514247 MS.gene58775:CDS 55.0%
TTCGTCCCTACACTTCGGTC+GGG - chr8.3:9513877-9513896 MS.gene58775:CDS 55.0%
TTGTTCGCGATCATCTGCCG+AGG - chr8.3:9514227-9514246 MS.gene58775:CDS 55.0%
! CTGTTTTGTCCCGAGCTGGA+GGG - chr8.3:9514736-9514755 MS.gene58775:intron 55.0%
! TGTTTTGTCCCGAGCTGGAG+GGG - chr8.3:9514737-9514756 MS.gene58775:intron 55.0%
!! AGGAGCACTGATCTGGTCAC+TGG + chr8.3:9513031-9513050 None:intergenic 55.0%
ACTCCCCCGACCGAAGTGTA+GGG + chr8.3:9513885-9513904 None:intergenic 60.0%
ATGGACAGCTAGGCGTGACG+CGG - chr8.3:9514853-9514872 MS.gene58775:intron 60.0%
CAAAACAGCCCTGCAGTCCC+CGG + chr8.3:9514724-9514743 None:intergenic 60.0%
TCGTCCCTACACTTCGGTCG+GGG - chr8.3:9513878-9513897 MS.gene58775:CDS 60.0%
TGGAGGTCGCCCTTACATGG+AGG - chr8.3:9513915-9513934 MS.gene58775:CDS 60.0%
!! AGGGCTGTTTTGTCCCGAGC+TGG - chr8.3:9514732-9514751 MS.gene58775:intron 60.0%
!! GCTGTTTTGTCCCGAGCTGG+AGG - chr8.3:9514735-9514754 MS.gene58775:intron 60.0%
AGCCAATGCCGGGGACTGCA+GGG - chr8.3:9514713-9514732 MS.gene58775:intron 65.0%
CACTCCCCCGACCGAAGTGT+AGG + chr8.3:9513886-9513905 None:intergenic 65.0%
CGTCCCTACACTTCGGTCGG+GGG - chr8.3:9513879-9513898 MS.gene58775:CDS 65.0%
CTACACTTCGGTCGGGGGAG+TGG - chr8.3:9513884-9513903 MS.gene58775:CDS 65.0%
TAGCCAATGCCGGGGACTGC+AGG - chr8.3:9514712-9514731 MS.gene58775:intron 65.0%
TGGACAGCTAGGCGTGACGC+GGG - chr8.3:9514854-9514873 MS.gene58775:intron 65.0%
!! TGACGCGGGCTCTAGGCAAC+TGG - chr8.3:9514868-9514887 MS.gene58775:intron 65.0%
AGCCCTGCAGTCCCCGGCAT+TGG + chr8.3:9514718-9514737 None:intergenic 70.0%
CTAGGCGTGACGCGGGCTCT+AGG - chr8.3:9514861-9514880 MS.gene58775:intron 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 9512883 9515265 9512883 ID=MS.gene58775
chr8.3 mRNA 9512883 9515265 9512883 ID=MS.gene58775.t1;Parent=MS.gene58775
chr8.3 exon 9515086 9515265 9515086 ID=MS.gene58775.t1.exon1;Parent=MS.gene58775.t1
chr8.3 CDS 9515086 9515265 9515086 ID=cds.MS.gene58775.t1;Parent=MS.gene58775.t1
chr8.3 exon 9514131 9514328 9514131 ID=MS.gene58775.t1.exon2;Parent=MS.gene58775.t1
chr8.3 CDS 9514131 9514328 9514131 ID=cds.MS.gene58775.t1;Parent=MS.gene58775.t1
chr8.3 exon 9513747 9513958 9513747 ID=MS.gene58775.t1.exon3;Parent=MS.gene58775.t1
chr8.3 CDS 9513747 9513958 9513747 ID=cds.MS.gene58775.t1;Parent=MS.gene58775.t1
chr8.3 exon 9512883 9513447 9512883 ID=MS.gene58775.t1.exon4;Parent=MS.gene58775.t1
chr8.3 CDS 9512883 9513447 9512883 ID=cds.MS.gene58775.t1;Parent=MS.gene58775.t1
Gene Sequence

>MS.gene58775

ATGTGTGTGCAAGAAGGTGAACAAGTTGATCAAGATAATAATAATATGGAGAAACTTGATAACAGAAGGATTTCATGGCCATTGCATTGTGATCTTTTGCATGCTCAAATGGATAAATCAGAAAGAGACTCTTCTATTAGAATTTCCAGTGACCAGATCAGTGCTCCTAATTCATTTCCTGTTAGTGTTTGATTTCCTTCATCTTCTCTTTCTTTTGTTCCTTCTTGTTATGCCATTTTTGTTCTTCTTTTCTTCCCCTATGTTATATTATAAGCTAGTTTTGGATTTTTTAAGATGGTTTTCCAATAAGGCCTCTTAGACTTTCATTATACTTAGGATATGTTTAGATTGACTTATTTGAACCTATGGCAAAAACACTTATGAAACTGTTTGAGAGAGCTTGTGAAAACAACTTTGACTTGCCTATAAGTTGTTTTCAGCTGATTTTCATAAGCTTGTCAAGATAGCTTTATGGAAACAGTTTATAACACATTTAGAAACTGTTTGACTTTATATTGTCTTTGTTAAATAAATAACATATACGTAAGTGCTTAATTAAGTTATTTATCCAAACCAGGCCTTAATTGCTTAATTATGCATTTTTGTTTTGAGTTTTGTTTTTCCTTTTGTTTTAAATTCTTATCTAATTATCTTTTTTCTAAATTTGAAATTGGTCTTTTCTTGTTTGCTTCTTCTTCATCTTTGCTTGAAGAGAGCTGCAAATGAAATTATGATTTTTAAGGGTTGCTTGACCTTGAAATTCTCTTAGATATGTTTTTCAAAGACTATAGATGATGTTAGCCTTTGATATAAGATGTGATTAGTCTCTAGGGATGTATTTGTTAGCACAAATTGTTGATAAGATAAATGTAAGTTGCAGTGTTTAATTATCTACATTCATTTTCTAATTATAATAATTTTCTTTGCATTATTTTAGCTGGAAAGCATTTGTGAGGATGCAGTGATTGCTGATAAAAAACAGAACCTGATAAATTTCGTCCCTACACTTCGGTCGGGGGAGTGGTCTGATATTGGAGGTCGCCCTTACATGGAGGATACTCACATATGCATTGAGGACTTGGCAAAGAAATTTGGTTACGATGTTGTCTGCGACGAAGCTATTTCCTTTTATGGTGTATGCCATCTAACTGATTTTGTTAACTGCCTGTTGTCATAAATTTTCTTTTATCTCTTACAACATATTATCTCATTTTTGTGATTATAAGATAGGAAAATTGCATTCATAACAAAGGATAAACATCTTTTAATCATGATTTAACATTAAAGGCAAATGGTATTCTGTGCAGGTATTTGATGGACATGGAGGGAAGAGTGCTGCACAATTTGTTCGCGATCATCTGCCGAGGGTGATTGTTGAGGATGCTGACTTCCCTCTTGAACTCGAGAAGGTGGTCACAAGGTCATTTTTGGAGACTGATTCAGAGTTTGCAAAAACATGCTCTATTGAGTCTTCCCTGTCTTCTGGTACAACTGCTTTGACTGCAATTATATTTGGAAGGTAAGCACTCGTCTCCACCATTCTTTGCCATTTTATAATCATAAGACCATTTTGTGGAGAGTCGCACAACTTTGGGTCAGGTGCAATACTTCCTAGCCAAGATGCACAGATACCGAACACGACACAAATAAAAATATTGACTGCTACGGGTGTCCATTAGAGTTATAGTCGTGTTGGAGAAAGAATAATAATTTCTAATGGGATACCTCTAAACGAGATGTCTGACACATGTCGTTATTTTCCTAGGGAATGCATACAATCATAGCACCTTGTTTAATTATCATTATTTTCCTGTACAGGTCTTTACTTGTAGCCAATGCCGGGGACTGCAGGGCTGTTTTGTCCCGAGCTGGAGGGGTAATAGAATTGTCCAAAGATCATAGGCCTTTATGCATGAAAGAAAGGATGAGGATCGAGTCTCTTGGCGGATTTATTGATGATGGTTACTTGAATGGACAGCTAGGCGTGACGCGGGCTCTAGGCAACTGGCATCTTGAAGGAATGAAGGAAGTGAGTGGAAGAAATGGACCACTAAGTGCTGAGCCAGAACTTAAATTGATGACATTGACAAAAGACGACGAGTTTTTGATAATTGGAAGTGATGGAATATGGGATGTTTTTCGTAGCCAAAACGCTGTAGATTTTGCTAGAAGGAGGCTTCAAGAGCACAATGATGTGAAACAATGTTGCAAGGAAATAATAGGCGAAGCAATAAAGCGAGGAGCAACAGATAATTTAACTGTTGTGTTGGTATGTTTTCAATCAGAACCACCACCACCTTTGGTTGTTGAAAGGCCTAACAGAGTCAGGAGAAGCATATCTGCTGAGGGACTTCAGAATCTTAAATACCTGTTAGAAAGATAG
Protein sequence

>MS.gene58775.t1

MCVQEGEQVDQDNNNMEKLDNRRISWPLHCDLLHAQMDKSERDSSIRISSDQISAPNSFPLESICEDAVIADKKQNLINFVPTLRSGEWSDIGGRPYMEDTHICIEDLAKKFGYDVVCDEAISFYGVFDGHGGKSAAQFVRDHLPRVIVEDADFPLELEKVVTRSFLETDSEFAKTCSIESSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRAGGVIELSKDHRPLCMKERMRIESLGGFIDDGYLNGQLGVTRALGNWHLEGMKEVSGRNGPLSAEPELKLMTLTKDDEFLIIGSDGIWDVFRSQNAVDFARRRLQEHNDVKQCCKEIIGEAIKRGATDNLTVVLVCFQSEPPPPLVVERPNRVRRSISAEGLQNLKYLLER