Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58850.t1 | XP_003624959.1 | 99.5 | 372 | 2 | 0 | 1 | 372 | 55 | 426 | 4.70E-217 | 763.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58850.t1 | Q9ZVN9 | 75.6 | 369 | 85 | 2 | 2 | 369 | 53 | 417 | 3.2e-166 | 585.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58850.t1 | G7L5Y2 | 99.5 | 372 | 2 | 0 | 1 | 372 | 55 | 426 | 3.4e-217 | 763.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054291 | MS.gene58850 | 0.803323 | 3.68E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATACAAATTATATATCAT+CGG | + | 50879:104982-105001 | None:intergenic | 10.0% |
| !! | ATCTAATAAATAAAAAAATC+TGG | + | 50879:104391-104410 | None:intergenic | 10.0% |
| !! | GTAATATAAAAATAACAAAT+AGG | - | 50879:104269-104288 | MS.gene58850:intron | 10.0% |
| !! | ATATACTATATAGTATAGTT+GGG | + | 50879:104902-104921 | None:intergenic | 15.0% |
| !! | TTATTGAAATACATAAATTG+TGG | - | 50879:104337-104356 | MS.gene58850:CDS | 15.0% |
| !! | AATAAGATACTTGTAATTGT+AGG | + | 50879:103086-103105 | None:intergenic | 20.0% |
| !! | AATTAATAAAACCAATACCT+TGG | + | 50879:102808-102827 | None:intergenic | 20.0% |
| !! | CATATACTATATAGTATAGT+TGG | + | 50879:104903-104922 | None:intergenic | 20.0% |
| !!! | AAGAATTAACTCTTTAAAGT+GGG | + | 50879:103761-103780 | None:intergenic | 20.0% |
| !!! | AGAAGTTCTGATTTTATATT+CGG | - | 50879:103472-103491 | MS.gene58850:intron | 20.0% |
| !!! | ATTCAAAAAGCATTTGTAAA+AGG | + | 50879:102960-102979 | None:intergenic | 20.0% |
| !!! | CAAAAATTATTGACTATTAC+AGG | + | 50879:104617-104636 | None:intergenic | 20.0% |
| !!! | GTATTGATTACTTGAAAATT+GGG | - | 50879:102872-102891 | MS.gene58850:intron | 20.0% |
| !!! | TATTGATTACTTGAAAATTG+GGG | - | 50879:102873-102892 | MS.gene58850:intron | 20.0% |
| !!! | TGTATTGATTACTTGAAAAT+TGG | - | 50879:102871-102890 | MS.gene58850:intron | 20.0% |
| !!! | TTTTACTCTTTTTGCATTTT+TGG | + | 50879:103538-103557 | None:intergenic | 20.0% |
| !!! | TTTTCAAGTAATCAATACAA+TGG | + | 50879:102870-102889 | None:intergenic | 20.0% |
| ! | AAAGAGTAAAATAAGATGCT+CGG | - | 50879:103547-103566 | MS.gene58850:intron | 25.0% |
| ! | AAGTATAGATGTACTTCTAA+AGG | + | 50879:102994-103013 | None:intergenic | 25.0% |
| ! | AATTTCATAAATTCTTCCCA+GGG | - | 50879:104297-104316 | MS.gene58850:CDS | 25.0% |
| ! | AGGAAATATAGATAAGACAT+TGG | + | 50879:102940-102959 | None:intergenic | 25.0% |
| ! | TAATTTCATAAATTCTTCCC+AGG | - | 50879:104296-104315 | MS.gene58850:CDS | 25.0% |
| ! | TACATTTGACATAGCATATT+AGG | + | 50879:104223-104242 | None:intergenic | 25.0% |
| ! | TAGAAACTAGTTATGTTACA+AGG | + | 50879:103158-103177 | None:intergenic | 25.0% |
| !! | AATAGTCAATAATTTTTGCG+AGG | - | 50879:104619-104638 | MS.gene58850:CDS | 25.0% |
| !! | CAAGAATTAACTCTTTAAAG+TGG | + | 50879:103762-103781 | None:intergenic | 25.0% |
| !!! | ACTTTTTTCTCATCCATATT+TGG | + | 50879:104730-104749 | None:intergenic | 25.0% |
| !!! | AGAATTGTTGTTTGCATTTT+GGG | + | 50879:105135-105154 | None:intergenic | 25.0% |
| !!! | CTTTTTTCTCATCCATATTT+GGG | + | 50879:104729-104748 | None:intergenic | 25.0% |
| !!! | TTTTTTCTCATCCATATTTG+GGG | + | 50879:104728-104747 | None:intergenic | 25.0% |
| AAAAATGCTGACACATTCTA+AGG | + | 50879:103695-103714 | None:intergenic | 30.0% | |
| AATCTTCAAGAATAAATCCC+TGG | + | 50879:104317-104336 | None:intergenic | 30.0% | |
| AATTTGTACATGTCATGAAG+AGG | - | 50879:103876-103895 | MS.gene58850:CDS | 30.0% | |
| ACGATACTTATACATTGTTG+TGG | - | 50879:102776-102795 | MS.gene58850:CDS | 30.0% | |
| ACGGCTAATTTGATTAAGAT+GGG | - | 50879:103820-103839 | MS.gene58850:CDS | 30.0% | |
| AGACACAGTACTCAATTATT+TGG | + | 50879:104833-104852 | None:intergenic | 30.0% | |
| AGTATGAAAGCTATGTTTGA+TGG | - | 50879:104684-104703 | MS.gene58850:CDS | 30.0% | |
| ATCTTCAAGAATAAATCCCT+GGG | + | 50879:104316-104335 | None:intergenic | 30.0% | |
| ATGACATGTACAAATTGCAA+CGG | + | 50879:103872-103891 | None:intergenic | 30.0% | |
| ATGACCTAACCATTGTAAAA+GGG | - | 50879:104422-104441 | MS.gene58850:CDS | 30.0% | |
| CTAAATCAAATCCCATCATA+TGG | - | 50879:103443-103462 | MS.gene58850:intron | 30.0% | |
| TACGGCTAATTTGATTAAGA+TGG | - | 50879:103819-103838 | MS.gene58850:CDS | 30.0% | |
| TAGTTTCTAACATCATGTGA+AGG | - | 50879:103169-103188 | MS.gene58850:intron | 30.0% | |
| TATGGATGAGAAAAAAGTCA+TGG | - | 50879:104732-104751 | MS.gene58850:intron | 30.0% | |
| TGACAACCAAAACAAGTATT+GGG | + | 50879:104093-104112 | None:intergenic | 30.0% | |
| TTGACAACCAAAACAAGTAT+TGG | + | 50879:104094-104113 | None:intergenic | 30.0% | |
| ! | AAAGCTTTGATATGTGATTC+AGG | + | 50879:103356-103375 | None:intergenic | 30.0% |
| ! | AGTTTTCCCAATACTTGTTT+TGG | - | 50879:104084-104103 | MS.gene58850:CDS | 30.0% |
| ! | ATCACATATCAAAGCTTTGA+TGG | - | 50879:103358-103377 | MS.gene58850:intron | 30.0% |
| ! | TAATCCCTTTTACAATGGTT+AGG | + | 50879:104429-104448 | None:intergenic | 30.0% |
| ! | TCACATATCAAAGCTTTGAT+GGG | - | 50879:103359-103378 | MS.gene58850:intron | 30.0% |
| !! | AACAAGTATTGGGAAAACTA+TGG | + | 50879:104083-104102 | None:intergenic | 30.0% |
| !! | AAGTTCTAGTGCATTTTGTA+GGG | + | 50879:103411-103430 | None:intergenic | 30.0% |
| !! | TCATGGTTTGTTAAAGTAAC+AGG | - | 50879:104749-104768 | MS.gene58850:intron | 30.0% |
| !!! | CAGAATTGTTGTTTGCATTT+TGG | + | 50879:105136-105155 | None:intergenic | 30.0% |
| AAAATAAGATGCTCGGTCAT+TGG | - | 50879:103554-103573 | MS.gene58850:intron | 35.0% | |
| AAACCTGTAAAAGCAGTGTT+TGG | + | 50879:105076-105095 | None:intergenic | 35.0% | |
| AACCTGTAAAAGCAGTGTTT+GGG | + | 50879:105075-105094 | None:intergenic | 35.0% | |
| AGACTCATGATACTGCTTAA+AGG | - | 50879:104242-104261 | MS.gene58850:intron | 35.0% | |
| ATAAAACCAATACCTTGGAC+AGG | + | 50879:102803-102822 | None:intergenic | 35.0% | |
| ATGATATGACCTTGCCAAAT+GGG | + | 50879:104001-104020 | None:intergenic | 35.0% | |
| CATGACCTAACCATTGTAAA+AGG | - | 50879:104421-104440 | MS.gene58850:CDS | 35.0% | |
| CTCAATGCTAGTATCTTACA+AGG | - | 50879:104559-104578 | MS.gene58850:CDS | 35.0% | |
| GAAAATTGGGGTTCAATTAG+AGG | - | 50879:102885-102904 | MS.gene58850:intron | 35.0% | |
| GAATGTACATGTCACAATCA+AGG | + | 50879:105159-105178 | None:intergenic | 35.0% | |
| GACTCATGATACTGCTTAAA+GGG | - | 50879:104243-104262 | MS.gene58850:intron | 35.0% | |
| ! | AGCAGGTTGAGTTATTTATC+AGG | - | 50879:103240-103259 | MS.gene58850:intron | 35.0% |
| ! | GCAGGTTGAGTTATTTATCA+GGG | - | 50879:103241-103260 | MS.gene58850:intron | 35.0% |
| ! | GTTGCTAATCCCTTTTACAA+TGG | + | 50879:104434-104453 | None:intergenic | 35.0% |
| ! | TAGTCGCACTAATTTTCATG+TGG | - | 50879:103045-103064 | MS.gene58850:intron | 35.0% |
| ! | TATTGACTATTACAGGCTCA+CGG | + | 50879:104610-104629 | None:intergenic | 35.0% |
| !! | AACACTGCTTTTACAGGTTT+TGG | - | 50879:105076-105095 | MS.gene58850:intron | 35.0% |
| !! | CAAGTTCTAGTGCATTTTGT+AGG | + | 50879:103412-103431 | None:intergenic | 35.0% |
| !! | TGGTTTGTTAAAGTAACAGG+TGG | - | 50879:104752-104771 | MS.gene58850:intron | 35.0% |
| !!! | CTTGGATCATTTTGAGATGA+TGG | + | 50879:104060-104079 | None:intergenic | 35.0% |
| AACTAGAGCTACAACTCACA+AGG | + | 50879:104479-104498 | None:intergenic | 40.0% | |
| AACTCACAAGGTGGTTAACA+GGG | + | 50879:104467-104486 | None:intergenic | 40.0% | |
| AAGCATCTTTGCCAAGAAAC+TGG | - | 50879:103602-103621 | MS.gene58850:intron | 40.0% | |
| AAGGTGGTTAACAGGGAATA+AGG | + | 50879:104460-104479 | None:intergenic | 40.0% | |
| AATACGTTCCTCCAGTTTCT+TGG | + | 50879:103616-103635 | None:intergenic | 40.0% | |
| AATGGCTGTTATTGCAAAGC+AGG | - | 50879:103223-103242 | MS.gene58850:intron | 40.0% | |
| AATTGCTTGACAGATCTTGG+TGG | - | 50879:103326-103345 | MS.gene58850:intron | 40.0% | |
| ACACAGTTGTACCCCAAATA+TGG | - | 50879:104714-104733 | MS.gene58850:CDS | 40.0% | |
| ACCAAACCAACATGACTAAG+TGG | + | 50879:103284-103303 | None:intergenic | 40.0% | |
| ACTTCTCGATGACCATATGA+TGG | + | 50879:103458-103477 | None:intergenic | 40.0% | |
| AGCAATAGCAGAGTATGCTA+CGG | - | 50879:103801-103820 | MS.gene58850:intron | 40.0% | |
| ATAGTTTCCATGAGATCACC+AGG | + | 50879:103515-103534 | None:intergenic | 40.0% | |
| ATCTCAGCAAATGGCACTAT+AGG | + | 50879:104033-104052 | None:intergenic | 40.0% | |
| ATGGGTAAACTAGAATGCTC+AGG | - | 50879:103377-103396 | MS.gene58850:intron | 40.0% | |
| ATTGGGGTTCAATTAGAGGT+TGG | - | 50879:102889-102908 | MS.gene58850:intron | 40.0% | |
| CAAATGGGGCGAAGAAATAA+GGG | + | 50879:103986-104005 | None:intergenic | 40.0% | |
| CAACAAAGTCTCCTTAGTCA+GGG | - | 50879:104111-104130 | MS.gene58850:CDS | 40.0% | |
| CAATTAGAGGTTGGGTATGT+TGG | - | 50879:102898-102917 | MS.gene58850:intron | 40.0% | |
| CAGAATCCACTTAGTCATGT+TGG | - | 50879:103275-103294 | MS.gene58850:intron | 40.0% | |
| CTACTGTATATTCTCAGCAG+CGG | + | 50879:104957-104976 | None:intergenic | 40.0% | |
| CTTCTCGATGACCATATGAT+GGG | + | 50879:103457-103476 | None:intergenic | 40.0% | |
| GATGATATGACCTTGCCAAA+TGG | + | 50879:104002-104021 | None:intergenic | 40.0% | |
| GCAATAACAGCCATTCTACT+TGG | + | 50879:103218-103237 | None:intergenic | 40.0% | |
| GCATTGAGACACTTTAGCAT+GGG | + | 50879:104547-104566 | None:intergenic | 40.0% | |
| GCTAATTGCTTGACAGATCT+TGG | - | 50879:103323-103342 | MS.gene58850:intron | 40.0% | |
| GTATTCAGTTGCACTAGATG+AGG | - | 50879:103631-103650 | MS.gene58850:intron | 40.0% | |
| GTATTGGGAAAACTATGGCT+TGG | + | 50879:104078-104097 | None:intergenic | 40.0% | |
| TACTGTATATTCTCAGCAGC+GGG | + | 50879:104956-104975 | None:intergenic | 40.0% | |
| TCAACAAAGTCTCCTTAGTC+AGG | - | 50879:104110-104129 | MS.gene58850:CDS | 40.0% | |
| TCTCAGCAAATGGCACTATA+GGG | + | 50879:104032-104051 | None:intergenic | 40.0% | |
| TGATATGACCTTGCCAAATG+GGG | + | 50879:104000-104019 | None:intergenic | 40.0% | |
| TTGCGAGGCATAAAAGTCTT+AGG | - | 50879:104634-104653 | MS.gene58850:CDS | 40.0% | |
| TTGGGGTTCAATTAGAGGTT+GGG | - | 50879:102890-102909 | MS.gene58850:intron | 40.0% | |
| ! | AGCATTGAGACACTTTAGCA+TGG | + | 50879:104548-104567 | None:intergenic | 40.0% |
| ! | GTTTGGTGACTACCAAAGAT+GGG | - | 50879:103297-103316 | MS.gene58850:intron | 40.0% |
| ! | TCCACTTAGTCATGTTGGTT+TGG | - | 50879:103280-103299 | MS.gene58850:intron | 40.0% |
| ! | TTCTAGTGCATTTTGTAGGG+AGG | + | 50879:103408-103427 | None:intergenic | 40.0% |
| ! | TTTGCATTTTGGGCAAGAGA+CGG | + | 50879:105125-105144 | None:intergenic | 40.0% |
| ! | TTTGGTGACTACCAAAGATG+GGG | - | 50879:103298-103317 | MS.gene58850:intron | 40.0% |
| !! | TTCCCAAACACTGCTTTTAC+AGG | - | 50879:105070-105089 | MS.gene58850:intron | 40.0% |
| AAGTAACAGGTGGATGACAG+TGG | - | 50879:104762-104781 | MS.gene58850:intron | 45.0% | |
| ACCAGGATCACATGTACTGA+GGG | + | 50879:103498-103517 | None:intergenic | 45.0% | |
| ACGATACTGGGCATGATGAA+TGG | + | 50879:102697-102716 | None:intergenic | 45.0% | |
| AGCTACTGCGCGAATTCAAA+AGG | - | 50879:102746-102765 | MS.gene58850:CDS | 45.0% | |
| AGTAGCTGCATTGGAAGCAA+GGG | + | 50879:102733-102752 | None:intergenic | 45.0% | |
| ATGAAGAGGCCAAAACTGGA+GGG | - | 50879:103890-103909 | MS.gene58850:CDS | 45.0% | |
| ATGTGATCCTGGTGATCTCA+TGG | - | 50879:103505-103524 | MS.gene58850:intron | 45.0% | |
| CAACTCACAAGGTGGTTAAC+AGG | + | 50879:104468-104487 | None:intergenic | 45.0% | |
| CAATCCACAATCCAACTGCT+TGG | - | 50879:104510-104529 | MS.gene58850:CDS | 45.0% | |
| CAGACACGAACTTTGCATCT+TGG | + | 50879:103928-103947 | None:intergenic | 45.0% | |
| CATCTTTGCCAAGAAACTGG+AGG | - | 50879:103605-103624 | MS.gene58850:intron | 45.0% | |
| CCAAATGGGGCGAAGAAATA+AGG | + | 50879:103987-104006 | None:intergenic | 45.0% | |
| GACTGCACGAGATGTATACA+TGG | + | 50879:103739-103758 | None:intergenic | 45.0% | |
| GAGAGCTTACATAATTGCCC+AGG | - | 50879:105181-105200 | MS.gene58850:CDS | 45.0% | |
| GATGGAGAGATCTCAGCAAA+TGG | + | 50879:104042-104061 | None:intergenic | 45.0% | |
| GCAATTAGCTACCCCATCTT+TGG | + | 50879:103312-103331 | None:intergenic | 45.0% | |
| GCTACTGCGCGAATTCAAAA+GGG | - | 50879:102747-102766 | MS.gene58850:CDS | 45.0% | |
| GGACTTTCGACCAAGTAGAA+TGG | - | 50879:103205-103224 | MS.gene58850:intron | 45.0% | |
| GTAGCATACTCTGCTATTGC+TGG | + | 50879:103802-103821 | None:intergenic | 45.0% | |
| TAGAGCTACAACTCACAAGG+TGG | + | 50879:104476-104495 | None:intergenic | 45.0% | |
| TGTCATGAAGAGGCCAAAAC+TGG | - | 50879:103886-103905 | MS.gene58850:CDS | 45.0% | |
| ! | CCTTATTTCTTCGCCCCATT+TGG | - | 50879:103984-104003 | MS.gene58850:CDS | 45.0% |
| !! | GGTTTGGTGACTACCAAAGA+TGG | - | 50879:103296-103315 | MS.gene58850:intron | 45.0% |
| !!! | AGGTTTTGGAGCAGGAAACA+AGG | - | 50879:105090-105109 | MS.gene58850:intron | 45.0% |
| !!! | GCTTTTACAGGTTTTGGAGC+AGG | - | 50879:105082-105101 | MS.gene58850:intron | 45.0% |
| AATTCGCGCAGTAGCTGCAT+TGG | + | 50879:102742-102761 | None:intergenic | 50.0% | |
| ATGTGAAGGCAGCTTCAGAG+AGG | - | 50879:103183-103202 | MS.gene58850:intron | 50.0% | |
| CACCAGGATCACATGTACTG+AGG | + | 50879:103499-103518 | None:intergenic | 50.0% | |
| CAGTAGCTGCATTGGAAGCA+AGG | + | 50879:102734-102753 | None:intergenic | 50.0% | |
| CATGAAGAGGCCAAAACTGG+AGG | - | 50879:103889-103908 | MS.gene58850:CDS | 50.0% | |
| CATTGTTGTGGACCTGTCCA+AGG | - | 50879:102788-102807 | MS.gene58850:CDS | 50.0% | |
| CTTTAGCATGGGCACATTGC+AGG | + | 50879:104536-104555 | None:intergenic | 50.0% | |
| GCAGATGCTTACCCTGACTA+AGG | + | 50879:104125-104144 | None:intergenic | 50.0% | |
| GCATACTCTGCTATTGCTGG+AGG | + | 50879:103799-103818 | None:intergenic | 50.0% | |
| TAAGGGTCAATCCACAGACG+CGG | + | 50879:103969-103988 | None:intergenic | 50.0% | |
| TACTCTGCTATTGCTGGAGG+TGG | + | 50879:103796-103815 | None:intergenic | 50.0% | |
| TGAAGAGGCCAAAACTGGAG+GGG | - | 50879:103891-103910 | MS.gene58850:CDS | 50.0% | |
| TGTGAAGGCAGCTTCAGAGA+GGG | - | 50879:103184-103203 | MS.gene58850:intron | 50.0% | |
| TGTGGACCTGTCCAAGGTAT+TGG | - | 50879:102794-102813 | MS.gene58850:CDS | 50.0% | |
| TTTCTTCGCCCCATTTGGCA+AGG | - | 50879:103989-104008 | MS.gene58850:CDS | 50.0% | |
| ! | AGTGTATCCCCCTCCAGTTT+TGG | + | 50879:103902-103921 | None:intergenic | 50.0% |
| CACATTGCAGGCCAAGCAGT+TGG | + | 50879:104524-104543 | None:intergenic | 55.0% | |
| CAGGCCAAGCAGTTGGATTG+TGG | + | 50879:104517-104536 | None:intergenic | 55.0% | |
| GAAGAGGCCAAAACTGGAGG+GGG | - | 50879:103892-103911 | MS.gene58850:CDS | 55.0% | |
| GCCCTCAGTACATGTGATCC+TGG | - | 50879:103494-103513 | MS.gene58850:intron | 55.0% | |
| TCTGCTATTGCTGGAGGTGG+TGG | + | 50879:103793-103812 | None:intergenic | 55.0% | |
| AACCCTCAGCTGCTCTCTGC+GGG | + | 50879:103849-103868 | None:intergenic | 60.0% | |
| CCACAGACGCGGCATTCAGT+AGG | + | 50879:103958-103977 | None:intergenic | 60.0% | |
| CCTACTGAATGCCGCGTCTG+TGG | - | 50879:103955-103974 | MS.gene58850:CDS | 60.0% | |
| CTGCATTGGAAGCAAGGGCG+CGG | + | 50879:102728-102747 | None:intergenic | 60.0% | |
| GAACCCTCAGCTGCTCTCTG+CGG | + | 50879:103850-103869 | None:intergenic | 60.0% | |
| GCCTGAAGCTCTCACAGCCT+GGG | + | 50879:105201-105220 | None:intergenic | 60.0% | |
| TGCCTGAAGCTCTCACAGCC+TGG | + | 50879:105202-105221 | None:intergenic | 60.0% | |
| TTCCCGCAGAGAGCAGCTGA+GGG | - | 50879:103844-103863 | MS.gene58850:CDS | 60.0% | |
| TTTCCCGCAGAGAGCAGCTG+AGG | - | 50879:103843-103862 | MS.gene58850:CDS | 60.0% | |
| !! | GCGGAGGCGTCTACGATACT+GGG | + | 50879:102709-102728 | None:intergenic | 60.0% |
| GCCCAGGCTGTGAGAGCTTC+AGG | - | 50879:105197-105216 | MS.gene58850:CDS | 65.0% | |
| ! | CATTGGAAGCAAGGGCGCGG+AGG | + | 50879:102725-102744 | None:intergenic | 65.0% |
| !! | CGCGGAGGCGTCTACGATAC+TGG | + | 50879:102710-102729 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 50879 | gene | 102685 | 105249 | 102685 | ID=MS.gene58850 |
| 50879 | mRNA | 102685 | 105249 | 102685 | ID=MS.gene58850.t1;Parent=MS.gene58850 |
| 50879 | exon | 105125 | 105249 | 105125 | ID=MS.gene58850.t1.exon1;Parent=MS.gene58850.t1 |
| 50879 | CDS | 105125 | 105249 | 105125 | ID=cds.MS.gene58850.t1;Parent=MS.gene58850.t1 |
| 50879 | exon | 104282 | 104743 | 104282 | ID=MS.gene58850.t1.exon2;Parent=MS.gene58850.t1 |
| 50879 | CDS | 104282 | 104743 | 104282 | ID=cds.MS.gene58850.t1;Parent=MS.gene58850.t1 |
| 50879 | exon | 103802 | 104177 | 103802 | ID=MS.gene58850.t1.exon3;Parent=MS.gene58850.t1 |
| 50879 | CDS | 103802 | 104177 | 103802 | ID=cds.MS.gene58850.t1;Parent=MS.gene58850.t1 |
| 50879 | exon | 102685 | 102842 | 102685 | ID=MS.gene58850.t1.exon4;Parent=MS.gene58850.t1 |
| 50879 | CDS | 102685 | 102842 | 102685 | ID=cds.MS.gene58850.t1;Parent=MS.gene58850.t1 |
| Gene Sequence |
| Protein sequence |
