Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58862.t1 | BBG97541.1 | 81.8 | 336 | 55 | 1 | 1 | 330 | 546 | 881 | 4.60E-135 | 491.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58862.t1 | P10978 | 29.8 | 339 | 215 | 7 | 7 | 329 | 5 | 336 | 3.5e-35 | 151.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58862.t1 | A0A4Y1RCM7 | 81.8 | 336 | 55 | 1 | 1 | 330 | 1 | 336 | 3.3e-135 | 491.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene58862 | 0.806855 | 6.72E-50 | -1.69E-46 |
| MS.gene054893 | MS.gene58862 | 0.801526 | 8.64E-49 | -1.69E-46 |
| MS.gene05615 | MS.gene58862 | 0.854085 | 1.56E-61 | -1.69E-46 |
| MS.gene05624 | MS.gene58862 | 0.804197 | 2.42E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58862.t1 | MTR_2g039140 | 40.217 | 184 | 77 | 2 | 1 | 183 | 120 | 271 | 1.94e-31 | 122 |
| MS.gene58862.t1 | MTR_4g036430 | 89.744 | 39 | 4 | 0 | 1 | 39 | 31 | 69 | 4.25e-19 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58862.t1 | AT3G29785 | 57.778 | 90 | 37 | 1 | 11 | 100 | 7 | 95 | 8.28e-30 | 112 |
Find 115 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATACCAACTGAACTTAAT+TGG | 0.095422 | 6.2:-78793524 | None:intergenic |
| AATTCTTGAACAATTCTTTC+TGG | 0.139133 | 6.2:-78794034 | None:intergenic |
| CTGAGAACTACGATGATTTC+TGG | 0.189947 | 6.2:-78793808 | None:intergenic |
| CTAGAAGATCTTCTTAATTC+AGG | 0.229154 | 6.2:-78795407 | None:intergenic |
| ATCTCATCTGTGGGACTTCC+TGG | 0.243179 | 6.2:-78795311 | None:intergenic |
| TCATCATCCTTCATCGATTC+TGG | 0.247368 | 6.2:-78793264 | None:intergenic |
| TTCGCCTCTTGATTCTTTGC+TGG | 0.253882 | 6.2:-78793897 | None:intergenic |
| ACTACGATGATTTCTGGATT+TGG | 0.314338 | 6.2:-78793802 | None:intergenic |
| TGACGCGTTGATATGTTCTT+TGG | 0.328692 | 6.2:+78793956 | MS.gene58862:CDS |
| CATTGTTATTCTTTCAAACT+TGG | 0.330356 | 6.2:-78797146 | None:intergenic |
| GTAGAGATGGACGATGTTCC+AGG | 0.354784 | 6.2:+78795293 | MS.gene58862:CDS |
| TCGCCTCTTGATTCTTTGCT+GGG | 0.374564 | 6.2:-78793896 | None:intergenic |
| ATGGTGCGGACTTTGGCTTT+TGG | 0.377376 | 6.2:+78793178 | MS.gene58862:CDS |
| GATACCAACTGAACTTAATT+GGG | 0.381678 | 6.2:-78793523 | None:intergenic |
| ATTTCTGGATTTGGATCGTC+TGG | 0.389287 | 6.2:-78793793 | None:intergenic |
| CATGCTTCATCATAATCTTC+AGG | 0.392057 | 6.2:-78795488 | None:intergenic |
| GATCTTCTTAATTCAGGAAC+TGG | 0.394192 | 6.2:-78795401 | None:intergenic |
| TACCGTGTGCTATTTATAGA+AGG | 0.395875 | 6.2:-78797276 | None:intergenic |
| ATTCTTGAACAATTCTTTCT+GGG | 0.401861 | 6.2:-78794033 | None:intergenic |
| TGTCTTCCCTACCAGATAGT+TGG | 0.404400 | 6.2:+78793580 | MS.gene58862:CDS |
| ACAGTAGCGCTCCAACTATC+TGG | 0.408688 | 6.2:-78793591 | None:intergenic |
| TCGTCCATCTCTACATAAAC+AGG | 0.414877 | 6.2:-78795284 | None:intergenic |
| AGAAATTCAACCAGAGGAAA+TGG | 0.417568 | 6.2:+78793753 | MS.gene58862:CDS |
| TGGAAATGAACAATCTTGTA+AGG | 0.417574 | 6.2:+78794088 | MS.gene58862:CDS |
| CTCTGGTCTCTTACTCTAGC+AGG | 0.427805 | 6.2:-78797023 | None:intergenic |
| ATTTGATGATGTTCGTGATC+TGG | 0.433721 | 6.2:+78793653 | MS.gene58862:CDS |
| TGAACAATCTTGTAAGGTTG+TGG | 0.438789 | 6.2:+78794094 | MS.gene58862:CDS |
| GAGATCCGACGGAGAGAGTT+GGG | 0.442215 | 6.2:+78793687 | MS.gene58862:CDS |
| GCAAATGTTGCTTCCACCTC+AGG | 0.445655 | 6.2:+78793927 | MS.gene58862:CDS |
| GGAGAGCAAGGAAGAGTCTT+GGG | 0.448480 | 6.2:+78793977 | MS.gene58862:CDS |
| AAGTTCGATGGTGCGGACTT+TGG | 0.452497 | 6.2:+78793171 | MS.gene58862:CDS |
| ATTCTGACAATTCCTCTGAC+TGG | 0.453532 | 6.2:-78795337 | None:intergenic |
| GACTGGGGAATCTCATCTGT+GGG | 0.463843 | 6.2:-78795320 | None:intergenic |
| TGAACTTTATTTGATGCTGA+AGG | 0.474628 | 6.2:-78793417 | None:intergenic |
| TAAACTTTACCAAGGTTACC+AGG | 0.478940 | 6.2:-78794062 | None:intergenic |
| TTCTGACAATTCCTCTGACT+GGG | 0.483574 | 6.2:-78795336 | None:intergenic |
| TACAAGATTGTTCATTTCCA+AGG | 0.487050 | 6.2:-78794085 | None:intergenic |
| TTTACCACGTCCATTTCCTC+TGG | 0.487326 | 6.2:-78793763 | None:intergenic |
| AACCTTGGTAAAGTTTACCT+TGG | 0.487612 | 6.2:+78794068 | MS.gene58862:CDS |
| ACCTTTGTTAACATATCTGC+GGG | 0.491781 | 6.2:-78796958 | None:intergenic |
| GAACAATCTTGTAAGGTTGT+GGG | 0.497160 | 6.2:+78794095 | MS.gene58862:CDS |
| TGGAGAGCAAGGAAGAGTCT+TGG | 0.501744 | 6.2:+78793976 | MS.gene58862:CDS |
| TGAGGCGGTTGTTTACGCTT+CGG | 0.506448 | 6.2:+78793445 | MS.gene58862:CDS |
| TCTATCGAGTGTTGGAATTG+TGG | 0.512167 | 6.2:+78793840 | MS.gene58862:CDS |
| TTTGAAAGAATAACAATGGT+TGG | 0.512292 | 6.2:+78797151 | MS.gene58862:CDS |
| CGCGTCACCTCCTCCTGAGG+TGG | 0.515832 | 6.2:-78793940 | None:intergenic |
| GAGTCTTGGGTGTTAGACTC+TGG | 0.518950 | 6.2:+78793990 | MS.gene58862:CDS |
| AATTATGTCCCTGGTAACCT+TGG | 0.520579 | 6.2:+78794053 | MS.gene58862:CDS |
| CACAGCTGTGAGTAGCTCCT+CGG | 0.527844 | 6.2:+78793614 | MS.gene58862:CDS |
| ACAGCTGTGAGTAGCTCCTC+GGG | 0.532462 | 6.2:+78793615 | MS.gene58862:CDS |
| GACTACATGTTGTTAACTGA+TGG | 0.536892 | 6.2:+78795458 | MS.gene58862:CDS |
| TAGCGCTCCAACTATCTGGT+AGG | 0.539026 | 6.2:-78793587 | None:intergenic |
| CTCCCACTTACTGGCATCCG+TGG | 0.539194 | 6.2:-78795516 | None:intergenic |
| AAAGAAACCAGAATCGATGA+AGG | 0.539324 | 6.2:+78793257 | MS.gene58862:CDS |
| TGTTGGAATTGTGGAAAGAC+GGG | 0.540082 | 6.2:+78793849 | MS.gene58862:CDS |
| GAAAGAATAACAATGGTTGG+TGG | 0.545382 | 6.2:+78797154 | MS.gene58862:CDS |
| GCCACCAACTAGTCAATTGT+GGG | 0.547388 | 6.2:-78797120 | None:intergenic |
| CGCAGATATGTTAACAAAGG+TGG | 0.548479 | 6.2:+78796960 | MS.gene58862:CDS |
| AGAGATCCGACGGAGAGAGT+TGG | 0.549236 | 6.2:+78793686 | MS.gene58862:CDS |
| AGCCACCAACTAGTCAATTG+TGG | 0.549621 | 6.2:-78797121 | None:intergenic |
| TGACTGGGGAATCTCATCTG+TGG | 0.549923 | 6.2:-78795321 | None:intergenic |
| CAAATAAAGTTCATTTGATG+AGG | 0.550433 | 6.2:+78793427 | MS.gene58862:CDS |
| TCTTGTAAGGTTGTGGGCAA+AGG | 0.550702 | 6.2:+78794101 | MS.gene58862:CDS |
| GGAACTGGAGTAAGATGCAC+TGG | 0.552002 | 6.2:-78795386 | None:intergenic |
| AGGACCCACAATTGACTAGT+TGG | 0.555500 | 6.2:+78797116 | MS.gene58862:intron |
| AACCACCGCTGGTCTTATGA+AGG | 0.557775 | 6.2:+78793371 | MS.gene58862:CDS |
| ACTCGAAATCTATCGAGTGT+TGG | 0.561027 | 6.2:+78793832 | MS.gene58862:CDS |
| ACCCACAATTGACTAGTTGG+TGG | 0.561885 | 6.2:+78797119 | MS.gene58862:CDS |
| TTTACGCTTCGGATGACAGA+AGG | 0.562705 | 6.2:+78793456 | MS.gene58862:CDS |
| GTGAAAATTGAAAAGTTCGA+TGG | 0.563926 | 6.2:+78793159 | MS.gene58862:CDS |
| CAAGTTTGAAAGAATAACAA+TGG | 0.566630 | 6.2:+78797147 | MS.gene58862:CDS |
| GTGTTGGAATTGTGGAAAGA+CGG | 0.567490 | 6.2:+78793848 | MS.gene58862:CDS |
| CTCTGTATGCAATACTGAAG+AGG | 0.567853 | 6.2:-78793721 | None:intergenic |
| ACAACCCAATTAAGTTCAGT+TGG | 0.568124 | 6.2:+78793519 | MS.gene58862:CDS |
| AAGTTGTGCTCAACTTCAGT+TGG | 0.568559 | 6.2:+78797000 | MS.gene58862:CDS |
| GTTGCTTCCACCTCAGGAGG+AGG | 0.568689 | 6.2:+78793933 | MS.gene58862:CDS |
| CGAGCCTGTTTATGTAGAGA+TGG | 0.573317 | 6.2:+78795280 | MS.gene58862:CDS |
| TTGTTCAAGAATTATGTCCC+TGG | 0.586171 | 6.2:+78794044 | MS.gene58862:CDS |
| TATTGCATACAGAGTCAAGA+GGG | 0.589523 | 6.2:+78793730 | MS.gene58862:CDS |
| AGCGCTCCAACTATCTGGTA+GGG | 0.594325 | 6.2:-78793586 | None:intergenic |
| CACCTTTGTTAACATATCTG+CGG | 0.595625 | 6.2:-78796959 | None:intergenic |
| AAATGGACGTGGTAAATCAA+AGG | 0.596335 | 6.2:+78793770 | MS.gene58862:CDS |
| TTCTCAGTGAAGAGATCCGA+CGG | 0.596721 | 6.2:+78793676 | MS.gene58862:CDS |
| GATATGTTCTTTGGAGAGCA+AGG | 0.598084 | 6.2:+78793965 | MS.gene58862:CDS |
| ATAAAGTTCATTTGATGAGG+CGG | 0.598437 | 6.2:+78793430 | MS.gene58862:CDS |
| CTTCTCGATAGACAAGCACT+TGG | 0.601850 | 6.2:+78793294 | MS.gene58862:CDS |
| AATGTTGCTTCCACCTCAGG+AGG | 0.603928 | 6.2:+78793930 | MS.gene58862:CDS |
| GATGACAGAAGGCGGATCAG+TGG | 0.605385 | 6.2:+78793467 | MS.gene58862:CDS |
| AATCGATGAAGGATGATGAG+TGG | 0.606445 | 6.2:+78793268 | MS.gene58862:CDS |
| AATTGAAAAGTTCGATGGTG+CGG | 0.608192 | 6.2:+78793164 | MS.gene58862:CDS |
| ACCGTGTGCTATTTATAGAA+GGG | 0.609729 | 6.2:-78797275 | None:intergenic |
| CAAGTGCTTGTCTATCGAGA+AGG | 0.612004 | 6.2:-78793293 | None:intergenic |
| TATGGCTGCAGACGAAGGAA+AGG | 0.614378 | 6.2:+78793137 | None:intergenic |
| TTCCAAGGTAAACTTTACCA+AGG | 0.615217 | 6.2:-78794070 | None:intergenic |
| GGAGTTATGGCTGCAGACGA+AGG | 0.617375 | 6.2:+78793132 | None:intergenic |
| AGCCTTCATAAGACCAGCGG+TGG | 0.620835 | 6.2:-78793373 | None:intergenic |
| GAATCAAGAGGCGAAAGATG+AGG | 0.623736 | 6.2:+78793905 | MS.gene58862:CDS |
| AGATGAGATTCCCCAGTCAG+AGG | 0.624521 | 6.2:+78795325 | MS.gene58862:CDS |
| GCAAAAGAGAAAACCACCGC+TGG | 0.626545 | 6.2:+78793360 | MS.gene58862:CDS |
| TCTGACAATTCCTCTGACTG+GGG | 0.630248 | 6.2:-78795335 | None:intergenic |
| CAACGCGTCACCTCCTCCTG+AGG | 0.630580 | 6.2:-78793943 | None:intergenic |
| TACATGTTGTTAACTGATGG+AGG | 0.633818 | 6.2:+78795461 | MS.gene58862:CDS |
| TGGTATCGAATTTGACGATG+AGG | 0.639552 | 6.2:+78793539 | MS.gene58862:CDS |
| ATTCACCCAACTCTCTCCGT+CGG | 0.641975 | 6.2:-78793692 | None:intergenic |
| AAACTTTACCAAGGTTACCA+GGG | 0.648516 | 6.2:-78794061 | None:intergenic |
| TCCCGCAGATATGTTAACAA+AGG | 0.657588 | 6.2:+78796957 | MS.gene58862:CDS |
| AGTAAGATGCACTGGTGTGT+CGG | 0.658744 | 6.2:-78795378 | None:intergenic |
| AGAGGGAGAAATTCAACCAG+AGG | 0.663485 | 6.2:+78793747 | MS.gene58862:CDS |
| TCAACCAGAGGAAATGGACG+TGG | 0.665050 | 6.2:+78793759 | MS.gene58862:CDS |
| GTATTGCATACAGAGTCAAG+AGG | 0.665368 | 6.2:+78793729 | MS.gene58862:CDS |
| GCTCCCAGCAAAGAATCAAG+AGG | 0.671318 | 6.2:+78793893 | MS.gene58862:CDS |
| AGATGCACTGGTGTGTCGGA+CGG | 0.673844 | 6.2:-78795374 | None:intergenic |
| TGATGAAGCATGTCAGACCA+CGG | 0.691661 | 6.2:+78795499 | MS.gene58862:CDS |
| ACGCTTCGGATGACAGAAGG+CGG | 0.696916 | 6.2:+78793459 | MS.gene58862:CDS |
| AAGAGCCTTCATAAGACCAG+CGG | 0.707222 | 6.2:-78793376 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTTAAGATTAAGTTGAAT+GGG | + | chr6.2:78794126-78794145 | MS.gene58862:intron | 20.0% |
| !!! | CTAACATTGATTAAAATTCA+AGG | + | chr6.2:78796925-78796944 | MS.gene58862:intron | 20.0% |
| ! | AATTCTTGAACAATTCTTTC+TGG | - | chr6.2:78794037-78794056 | None:intergenic | 25.0% |
| ! | ACTGGTTATATATTTACTGT+TGG | + | chr6.2:78796631-78796650 | MS.gene58862:intron | 25.0% |
| ! | ATTCTTGAACAATTCTTTCT+GGG | - | chr6.2:78794036-78794055 | None:intergenic | 25.0% |
| ! | CAAATAAAGTTCATTTGATG+AGG | + | chr6.2:78793427-78793446 | MS.gene58862:CDS | 25.0% |
| ! | CAAATGAAAATCCTAATCTA+TGG | + | chr6.2:78794357-78794376 | MS.gene58862:intron | 25.0% |
| ! | CAAGTTTGAAAGAATAACAA+TGG | + | chr6.2:78797147-78797166 | MS.gene58862:CDS | 25.0% |
| ! | TATATATTTACTGTTGGTAC+TGG | + | chr6.2:78796637-78796656 | MS.gene58862:intron | 25.0% |
| ! | TTTGAAAGAATAACAATGGT+TGG | + | chr6.2:78797151-78797170 | MS.gene58862:CDS | 25.0% |
| !! | CATTGTTATTCTTTCAAACT+TGG | - | chr6.2:78797149-78797168 | None:intergenic | 25.0% |
| !!! | GAAGTTAAGATTAAGTTGAA+TGG | + | chr6.2:78794125-78794144 | MS.gene58862:intron | 25.0% |
| !!! | TTCATTTTTGCTTCTTTAGT+TGG | - | chr6.2:78797184-78797203 | None:intergenic | 25.0% |
| AAAGAATTGATATGGCTTCA+AGG | + | chr6.2:78796745-78796764 | MS.gene58862:intron | 30.0% | |
| AAAGGAGAGATAAAAGTAGA+AGG | + | chr6.2:78796559-78796578 | MS.gene58862:intron | 30.0% | |
| AAAGTGCACTTCTTAGATTT+GGG | - | chr6.2:78795116-78795135 | None:intergenic | 30.0% | |
| AAATGTTTGTACTTCAGCAA+AGG | + | chr6.2:78796541-78796560 | MS.gene58862:intron | 30.0% | |
| AAGCTAGCAAAGAATTGATA+TGG | + | chr6.2:78796737-78796756 | MS.gene58862:intron | 30.0% | |
| AGAAAAAGGGAAAGAGAATA+TGG | + | chr6.2:78795889-78795908 | MS.gene58862:intron | 30.0% | |
| ATAAAATACCAGAAGAGGTA+TGG | + | chr6.2:78795000-78795019 | MS.gene58862:intron | 30.0% | |
| ATAAAGTTCATTTGATGAGG+CGG | + | chr6.2:78793430-78793449 | MS.gene58862:CDS | 30.0% | |
| ATATGTGAAGACTGTATACT+TGG | + | chr6.2:78794470-78794489 | MS.gene58862:intron | 30.0% | |
| ATTGAAATCAGTCTTCAAGT+GGG | + | chr6.2:78797078-78797097 | MS.gene58862:intron | 30.0% | |
| CTAGAAGATCTTCTTAATTC+AGG | - | chr6.2:78795410-78795429 | None:intergenic | 30.0% | |
| GAATTTGACATGAAGGATTT+AGG | + | chr6.2:78796145-78796164 | MS.gene58862:intron | 30.0% | |
| GATACCAACTGAACTTAATT+GGG | - | chr6.2:78793526-78793545 | None:intergenic | 30.0% | |
| GATGATTGGAAGATTTCAAA+AGG | + | chr6.2:78794254-78794273 | MS.gene58862:intron | 30.0% | |
| GGATGATGAAAACAAAAAGA+TGG | + | chr6.2:78795175-78795194 | MS.gene58862:intron | 30.0% | |
| GTAGCAAAACTTCTTGAATT+TGG | - | chr6.2:78794784-78794803 | None:intergenic | 30.0% | |
| GTCAAAAGAATTTGACATGA+AGG | + | chr6.2:78796138-78796157 | MS.gene58862:intron | 30.0% | |
| GTGAAAATTGAAAAGTTCGA+TGG | + | chr6.2:78793159-78793178 | MS.gene58862:CDS | 30.0% | |
| TACAAGATTGTTCATTTCCA+AGG | - | chr6.2:78794088-78794107 | None:intergenic | 30.0% | |
| TATAACCAGTTGTACTTCTT+CGG | - | chr6.2:78796621-78796640 | None:intergenic | 30.0% | |
| TATGTGCATATTAGTGATCA+AGG | + | chr6.2:78795074-78795093 | MS.gene58862:intron | 30.0% | |
| TGGAAATGAACAATCTTGTA+AGG | + | chr6.2:78794088-78794107 | MS.gene58862:CDS | 30.0% | |
| TGTTGAATCTTTGCAAAACA+CGG | - | chr6.2:78796255-78796274 | None:intergenic | 30.0% | |
| TTTGATCTCAAATCAGACAT+GGG | + | chr6.2:78795565-78795584 | MS.gene58862:intron | 30.0% | |
| ! | ATACCAAGAATTTTCTTTGC+CGG | - | chr6.2:78796172-78796191 | None:intergenic | 30.0% |
| ! | GTTTTGCAAAGATTCAACAT+GGG | + | chr6.2:78796256-78796275 | MS.gene58862:intron | 30.0% |
| ! | TATTTGAAGCTTTCAAGAGA+TGG | + | chr6.2:78794681-78794700 | MS.gene58862:intron | 30.0% |
| ! | TGAACTTTATTTGATGCTGA+AGG | - | chr6.2:78793420-78793439 | None:intergenic | 30.0% |
| ! | TGTTTTGCAAAGATTCAACA+TGG | + | chr6.2:78796255-78796274 | MS.gene58862:intron | 30.0% |
| AAACTTTACCAAGGTTACCA+GGG | - | chr6.2:78794064-78794083 | None:intergenic | 35.0% | |
| AAAGAAACCAGAATCGATGA+AGG | + | chr6.2:78793257-78793276 | MS.gene58862:CDS | 35.0% | |
| AAAGAGTGATGTACAAAGAC+AGG | + | chr6.2:78795225-78795244 | MS.gene58862:intron | 35.0% | |
| AAATCCAGGTAAAGCTCATT+GGG | + | chr6.2:78796474-78796493 | MS.gene58862:intron | 35.0% | |
| AAATGGACGTGGTAAATCAA+AGG | + | chr6.2:78793770-78793789 | MS.gene58862:CDS | 35.0% | |
| AACCTTGGTAAAGTTTACCT+TGG | + | chr6.2:78794068-78794087 | MS.gene58862:CDS | 35.0% | |
| AAGGAAAACTACCAAGTCTT+CGG | + | chr6.2:78794432-78794451 | MS.gene58862:intron | 35.0% | |
| AATCTATGGCACAAGAGATT+AGG | + | chr6.2:78794371-78794390 | MS.gene58862:intron | 35.0% | |
| AATCTCTTGTGCCATAGATT+AGG | - | chr6.2:78794371-78794390 | None:intergenic | 35.0% | |
| AATTGAAAAGTTCGATGGTG+CGG | + | chr6.2:78793164-78793183 | MS.gene58862:CDS | 35.0% | |
| ACAACCCAATTAAGTTCAGT+TGG | + | chr6.2:78793519-78793538 | MS.gene58862:CDS | 35.0% | |
| ACCTTTGTTAACATATCTGC+GGG | - | chr6.2:78796961-78796980 | None:intergenic | 35.0% | |
| ACGAAAAACTTAATCTCCGT+AGG | + | chr6.2:78794191-78794210 | MS.gene58862:intron | 35.0% | |
| AGAAATTCAACCAGAGGAAA+TGG | + | chr6.2:78793753-78793772 | MS.gene58862:CDS | 35.0% | |
| AGACTTCATTTCGTCTTTCA+TGG | - | chr6.2:78795546-78795565 | None:intergenic | 35.0% | |
| AGAGGAAGAAAAAGAACTCA+TGG | + | chr6.2:78796348-78796367 | MS.gene58862:intron | 35.0% | |
| AGGTTAAAGAAGAGCTTGTA+TGG | + | chr6.2:78795917-78795936 | MS.gene58862:intron | 35.0% | |
| ATCACGAGAGATAAGCAAAA+AGG | + | chr6.2:78796196-78796215 | MS.gene58862:intron | 35.0% | |
| ATCTCTTGAAGAAGCAACAA+TGG | - | chr6.2:78796024-78796043 | None:intergenic | 35.0% | |
| ATGAAGGTTATGCACTCAAA+AGG | + | chr6.2:78794413-78794432 | MS.gene58862:intron | 35.0% | |
| ATTTCTATTGACCGAAGACT+TGG | - | chr6.2:78794446-78794465 | None:intergenic | 35.0% | |
| CACCTTTGTTAACATATCTG+CGG | - | chr6.2:78796962-78796981 | None:intergenic | 35.0% | |
| CAGAAGGATTCTCAGAAAAA+GGG | + | chr6.2:78795876-78795895 | MS.gene58862:intron | 35.0% | |
| CATGCTTCATCATAATCTTC+AGG | - | chr6.2:78795491-78795510 | None:intergenic | 35.0% | |
| CGATACCAACTGAACTTAAT+TGG | - | chr6.2:78793527-78793546 | None:intergenic | 35.0% | |
| CTTCATTAGATCTCTTCTTG+AGG | + | chr6.2:78796894-78796913 | MS.gene58862:intron | 35.0% | |
| CTTTGATCTCAAATCAGACA+TGG | + | chr6.2:78795564-78795583 | MS.gene58862:intron | 35.0% | |
| GAAAGAATAACAATGGTTGG+TGG | + | chr6.2:78797154-78797173 | MS.gene58862:CDS | 35.0% | |
| GAACAATCTTGTAAGGTTGT+GGG | + | chr6.2:78794095-78794114 | MS.gene58862:CDS | 35.0% | |
| GAAGTACAAACATTTCTCTG+TGG | - | chr6.2:78796536-78796555 | None:intergenic | 35.0% | |
| GACACTTCAAAAATCAGTGT+AGG | + | chr6.2:78793871-78793890 | MS.gene58862:CDS | 35.0% | |
| GACTACATGTTGTTAACTGA+TGG | + | chr6.2:78795458-78795477 | MS.gene58862:CDS | 35.0% | |
| GATCTTCTTAATTCAGGAAC+TGG | - | chr6.2:78795404-78795423 | None:intergenic | 35.0% | |
| GATTGAAATCAGTCTTCAAG+TGG | + | chr6.2:78797077-78797096 | MS.gene58862:intron | 35.0% | |
| GTTTGAAAACTTCATGCACA+AGG | + | chr6.2:78795973-78795992 | MS.gene58862:intron | 35.0% | |
| TAAACTTTACCAAGGTTACC+AGG | - | chr6.2:78794065-78794084 | None:intergenic | 35.0% | |
| TACATGTTGTTAACTGATGG+AGG | + | chr6.2:78795461-78795480 | MS.gene58862:CDS | 35.0% | |
| TAGGCCATATGAGTGAAAAA+GGG | + | chr6.2:78794390-78794409 | MS.gene58862:intron | 35.0% | |
| TATGAGTGAAAAAGGGATGA+AGG | + | chr6.2:78794397-78794416 | MS.gene58862:intron | 35.0% | |
| TATTGCATACAGAGTCAAGA+GGG | + | chr6.2:78793730-78793749 | MS.gene58862:CDS | 35.0% | |
| TCTTCATGGAGACTTAAATG+AGG | + | chr6.2:78795835-78795854 | MS.gene58862:intron | 35.0% | |
| TGAACAATCTTGTAAGGTTG+TGG | + | chr6.2:78794094-78794113 | MS.gene58862:CDS | 35.0% | |
| TTAGGCCATATGAGTGAAAA+AGG | + | chr6.2:78794389-78794408 | MS.gene58862:intron | 35.0% | |
| TTCATATTCACCACCATTGT+CGG | - | chr6.2:78794757-78794776 | None:intergenic | 35.0% | |
| TTCCAAGGTAAACTTTACCA+AGG | - | chr6.2:78794073-78794092 | None:intergenic | 35.0% | |
| TTGTTCAAGAATTATGTCCC+TGG | + | chr6.2:78794044-78794063 | MS.gene58862:CDS | 35.0% | |
| TTGTTGCAACTGCAATCAAA+TGG | - | chr6.2:78794340-78794359 | None:intergenic | 35.0% | |
| ! | ACTACGATGATTTCTGGATT+TGG | - | chr6.2:78793805-78793824 | None:intergenic | 35.0% |
| ! | ATTAAGTTTTTCGTGAGGTC+GGG | - | chr6.2:78794185-78794204 | None:intergenic | 35.0% |
| ! | CTCTCACATCTTAGAGTTTT+CGG | + | chr6.2:78795041-78795060 | MS.gene58862:intron | 35.0% |
| ! | CTTTTATCGATGATCACTCT+AGG | + | chr6.2:78794621-78794640 | MS.gene58862:intron | 35.0% |
| ! | GAAAGTGCACTTCTTAGATT+TGG | - | chr6.2:78795117-78795136 | None:intergenic | 35.0% |
| ! | GATTAAGTTTTTCGTGAGGT+CGG | - | chr6.2:78794186-78794205 | None:intergenic | 35.0% |
| ! | TAAGTTGAATGGGTCTGTAT+GGG | + | chr6.2:78794136-78794155 | MS.gene58862:intron | 35.0% |
| ! | TCTAAGAAGTGCACTTTCAT+CGG | + | chr6.2:78795119-78795138 | MS.gene58862:intron | 35.0% |
| ! | TCTGGTATTTTATGCTCCAA+TGG | - | chr6.2:78794993-78795012 | None:intergenic | 35.0% |
| !! | AAGCGGTTAAATGGATTTTG+AGG | + | chr6.2:78796497-78796516 | MS.gene58862:intron | 35.0% |
| !! | ATTTGATGATGTTCGTGATC+TGG | + | chr6.2:78793653-78793672 | MS.gene58862:CDS | 35.0% |
| !! | GTTGATGATATGTTAGTAGC+AGG | + | chr6.2:78796076-78796095 | MS.gene58862:intron | 35.0% |
| !! | TCATCCCTTTTTCACTCATA+TGG | - | chr6.2:78794397-78794416 | None:intergenic | 35.0% |
| !! | TTAAGTTGAATGGGTCTGTA+TGG | + | chr6.2:78794135-78794154 | MS.gene58862:intron | 35.0% |
| !!! | TGGATTTTGAGGTATCTAAG+AGG | + | chr6.2:78796508-78796527 | MS.gene58862:intron | 35.0% |
| !!! | TTTTGTTTTCATCATCCCAG+AGG | - | chr6.2:78795172-78795191 | None:intergenic | 35.0% |
| AAAAAGCTCAGAACCGACAA+TGG | + | chr6.2:78794741-78794760 | MS.gene58862:intron | 40.0% | |
| AAAGGATTCCAGCAGAAAGA+AGG | + | chr6.2:78795695-78795714 | MS.gene58862:intron | 40.0% | |
| AAATCTTCCAATCATCACCG+TGG | - | chr6.2:78794250-78794269 | None:intergenic | 40.0% | |
| AACTTCATATACCACTGCCT+TGG | - | chr6.2:78795956-78795975 | None:intergenic | 40.0% | |
| AAGTTGTGCTCAACTTCAGT+TGG | + | chr6.2:78797000-78797019 | MS.gene58862:CDS | 40.0% | |
| AATCGATGAAGGATGATGAG+TGG | + | chr6.2:78793268-78793287 | MS.gene58862:CDS | 40.0% | |
| AATTATGTCCCTGGTAACCT+TGG | + | chr6.2:78794053-78794072 | MS.gene58862:CDS | 40.0% | |
| ACTCGAAATCTATCGAGTGT+TGG | + | chr6.2:78793832-78793851 | MS.gene58862:CDS | 40.0% | |
| AGCAGGTTTATGTCAAATCC+AGG | + | chr6.2:78796460-78796479 | MS.gene58862:intron | 40.0% | |
| AGCTCAAGTTTCTCCTTCTT+TGG | - | chr6.2:78794536-78794555 | None:intergenic | 40.0% | |
| AGGCTTACCAAAGAACTTCT+GGG | + | chr6.2:78794917-78794936 | MS.gene58862:intron | 40.0% | |
| AGTCAATTCCTTCTTTCTGC+TGG | - | chr6.2:78795706-78795725 | None:intergenic | 40.0% | |
| ATATACATGCACCAACCAGA+AGG | + | chr6.2:78795860-78795879 | MS.gene58862:intron | 40.0% | |
| ATTCCATATGCTTCGGCAAT+TGG | + | chr6.2:78796376-78796395 | MS.gene58862:intron | 40.0% | |
| ATTCTGACAATTCCTCTGAC+TGG | - | chr6.2:78795340-78795359 | None:intergenic | 40.0% | |
| CAAATCCAGGTAAAGCTCAT+TGG | + | chr6.2:78796473-78796492 | MS.gene58862:intron | 40.0% | |
| CAAATGGGTGTATCGAGTAA+AGG | + | chr6.2:78795628-78795647 | MS.gene58862:intron | 40.0% | |
| CAAGGATTGTTGACAGAGTT+AGG | + | chr6.2:78796763-78796782 | MS.gene58862:intron | 40.0% | |
| CATTCGAGAACAAAGCACAT+AGG | + | chr6.2:78796859-78796878 | MS.gene58862:intron | 40.0% | |
| CCAGAAGGATTCTCAGAAAA+AGG | + | chr6.2:78795875-78795894 | MS.gene58862:intron | 40.0% | |
| CGCAGATATGTTAACAAAGG+TGG | + | chr6.2:78796960-78796979 | MS.gene58862:CDS | 40.0% | |
| CTCAAGTTTCTCCTTCTTTG+GGG | - | chr6.2:78794534-78794553 | None:intergenic | 40.0% | |
| CTCTGTATGCAATACTGAAG+AGG | - | chr6.2:78793724-78793743 | None:intergenic | 40.0% | |
| CTGAGAACTACGATGATTTC+TGG | - | chr6.2:78793811-78793830 | None:intergenic | 40.0% | |
| CTTGAAGAAGCAACAATGGT+CGG | - | chr6.2:78796020-78796039 | None:intergenic | 40.0% | |
| GAAAACTTCATGCACAAGGA+AGG | + | chr6.2:78795977-78795996 | MS.gene58862:intron | 40.0% | |
| GAACTAGCTAAGTTACCCAT+GGG | + | chr6.2:78795587-78795606 | MS.gene58862:intron | 40.0% | |
| GCTCAAGTTTCTCCTTCTTT+GGG | - | chr6.2:78794535-78794554 | None:intergenic | 40.0% | |
| GGAGCATAAAATACCAGAAG+AGG | + | chr6.2:78794995-78795014 | MS.gene58862:intron | 40.0% | |
| GGCTAAGATTCCATATGCTT+CGG | + | chr6.2:78796369-78796388 | MS.gene58862:intron | 40.0% | |
| GGTTATGGTGAAGATGAGTT+TGG | + | chr6.2:78795140-78795159 | MS.gene58862:intron | 40.0% | |
| GTATTGCATACAGAGTCAAG+AGG | + | chr6.2:78793729-78793748 | MS.gene58862:CDS | 40.0% | |
| GTGAAGACTGCATTTCTTCA+TGG | + | chr6.2:78795821-78795840 | MS.gene58862:intron | 40.0% | |
| GTGTTGGAATTGTGGAAAGA+CGG | + | chr6.2:78793848-78793867 | MS.gene58862:CDS | 40.0% | |
| TAAGTTACCCATGGGAAAGA+AGG | + | chr6.2:78795595-78795614 | MS.gene58862:intron | 40.0% | |
| TAGATCTCTTCTTGAGGATG+AGG | + | chr6.2:78796900-78796919 | MS.gene58862:intron | 40.0% | |
| TATGTAGATGCAGACTTTGC+TGG | + | chr6.2:78796583-78796602 | MS.gene58862:intron | 40.0% | |
| TCAGCTTACTTAATCAACCG+AGG | + | chr6.2:78794957-78794976 | MS.gene58862:intron | 40.0% | |
| TCCCGCAGATATGTTAACAA+AGG | + | chr6.2:78796957-78796976 | MS.gene58862:CDS | 40.0% | |
| TCGTCCATCTCTACATAAAC+AGG | - | chr6.2:78795287-78795306 | None:intergenic | 40.0% | |
| TGACATGAAGGATTTAGGTC+CGG | + | chr6.2:78796150-78796169 | MS.gene58862:intron | 40.0% | |
| TGGAAGTTTGATGTACGCAA+TGG | + | chr6.2:78796396-78796415 | MS.gene58862:intron | 40.0% | |
| TGGTGAAGCTCAATACTATC+AGG | + | chr6.2:78795747-78795766 | MS.gene58862:intron | 40.0% | |
| TGTATCTCTTAGAGCCATCA+TGG | - | chr6.2:78795658-78795677 | None:intergenic | 40.0% | |
| TGTTGGAATTGTGGAAAGAC+GGG | + | chr6.2:78793849-78793868 | MS.gene58862:CDS | 40.0% | |
| TTCTGACAATTCCTCTGACT+GGG | - | chr6.2:78795339-78795358 | None:intergenic | 40.0% | |
| TTTCAAGAGATGGAAAGCCA+TGG | + | chr6.2:78794691-78794710 | MS.gene58862:intron | 40.0% | |
| ! | AAGAAGTTTTGCTACGAGCA+CGG | + | chr6.2:78794789-78794808 | MS.gene58862:intron | 40.0% |
| ! | AAGTGCACTTTCATCGGTTA+TGG | + | chr6.2:78795125-78795144 | MS.gene58862:intron | 40.0% |
| ! | ACTTGTCTCATTTTCCACCA+TGG | - | chr6.2:78794711-78794730 | None:intergenic | 40.0% |
| ! | ATAGTATTGAGCTTCACCAC+TGG | - | chr6.2:78795746-78795765 | None:intergenic | 40.0% |
| ! | ATGATCACTCTAGGAAGGTA+TGG | + | chr6.2:78794630-78794649 | MS.gene58862:intron | 40.0% |
| ! | ATTTCTGGATTTGGATCGTC+TGG | - | chr6.2:78793796-78793815 | None:intergenic | 40.0% |
| ! | CGGAGATTAAGTTTTTCGTG+AGG | - | chr6.2:78794190-78794209 | None:intergenic | 40.0% |
| ! | CTCAAGATAGAGATTTTCGC+TGG | - | chr6.2:78795792-78795811 | None:intergenic | 40.0% |
| ! | GATATGTTCTTTGGAGAGCA+AGG | + | chr6.2:78793965-78793984 | MS.gene58862:CDS | 40.0% |
| ! | TATCGATGATCACTCTAGGA+AGG | + | chr6.2:78794625-78794644 | MS.gene58862:intron | 40.0% |
| ! | TCTTTTTCTTCCTCTGTCTG+AGG | - | chr6.2:78796343-78796362 | None:intergenic | 40.0% |
| ! | TGACGCGTTGATATGTTCTT+TGG | + | chr6.2:78793956-78793975 | MS.gene58862:CDS | 40.0% |
| ! | TGATCACTCTAGGAAGGTAT+GGG | + | chr6.2:78794631-78794650 | MS.gene58862:intron | 40.0% |
| ! | TGGTATCGAATTTGACGATG+AGG | + | chr6.2:78793539-78793558 | MS.gene58862:CDS | 40.0% |
| ! | TGTCTGAGGTGATTGTTCTT+TGG | - | chr6.2:78796329-78796348 | None:intergenic | 40.0% |
| ! | TTTCATCTTTTTGCTTCCCG+AGG | - | chr6.2:78793634-78793653 | None:intergenic | 40.0% |
| ! | TTTCTGAGAATCCTTCTGGT+TGG | - | chr6.2:78795874-78795893 | None:intergenic | 40.0% |
| !! | AGAAGGCACTTCACAACAAA+TGG | + | chr6.2:78795612-78795631 | MS.gene58862:intron | 40.0% |
| !! | CCTTTTTCTGAGAATCCTTC+TGG | - | chr6.2:78795878-78795897 | None:intergenic | 40.0% |
| !! | GAAGGCACTTCACAACAAAT+GGG | + | chr6.2:78795613-78795632 | MS.gene58862:intron | 40.0% |
| !! | TCATCATCCTTCATCGATTC+TGG | - | chr6.2:78793267-78793286 | None:intergenic | 40.0% |
| !! | TCTATCGAGTGTTGGAATTG+TGG | + | chr6.2:78793840-78793859 | MS.gene58862:CDS | 40.0% |
| !! | TCTGGTTTCTTTTCTGTGAG+AGG | - | chr6.2:78793249-78793268 | None:intergenic | 40.0% |
| AAGAGCCTTCATAAGACCAG+CGG | - | chr6.2:78793379-78793398 | None:intergenic | 45.0% | |
| AAGTGGAAGAACCCCAAAGA+AGG | + | chr6.2:78794520-78794539 | MS.gene58862:intron | 45.0% | |
| AATGCTTCCCACCAATGGAT+GGG | - | chr6.2:78794592-78794611 | None:intergenic | 45.0% | |
| AGAACAATCACCTCAGACAG+AGG | + | chr6.2:78796330-78796349 | MS.gene58862:intron | 45.0% | |
| AGAGGGAGAAATTCAACCAG+AGG | + | chr6.2:78793747-78793766 | MS.gene58862:CDS | 45.0% | |
| AGAGTCAGCTTTCAGACAAG+TGG | + | chr6.2:78794503-78794522 | MS.gene58862:intron | 45.0% | |
| AGGTAAAGCTCATTGGGAAG+CGG | + | chr6.2:78796480-78796499 | MS.gene58862:intron | 45.0% | |
| ATGGGTGTATCGAGTAAAGG+AGG | + | chr6.2:78795631-78795650 | MS.gene58862:intron | 45.0% | |
| CAAGTGCTTGTCTATCGAGA+AGG | - | chr6.2:78793296-78793315 | None:intergenic | 45.0% | |
| CACCACTGGAGCAAAAATCT+CGG | - | chr6.2:78795732-78795751 | None:intergenic | 45.0% | |
| CAGGCTTACCAAAGAACTTC+TGG | + | chr6.2:78794916-78794935 | MS.gene58862:intron | 45.0% | |
| CGAGCCTGTTTATGTAGAGA+TGG | + | chr6.2:78795280-78795299 | MS.gene58862:CDS | 45.0% | |
| CTAGAGTAAGAGACCAGAGA+AGG | + | chr6.2:78797027-78797046 | MS.gene58862:intron | 45.0% | |
| CTCAGCTACACCATTGTGTT+GGG | - | chr6.2:78794847-78794866 | None:intergenic | 45.0% | |
| CTCATTGGGAAGCGGTTAAA+TGG | + | chr6.2:78796488-78796507 | MS.gene58862:intron | 45.0% | |
| CTGGCACAGTTCTTTCCATT+CGG | - | chr6.2:78794818-78794837 | None:intergenic | 45.0% | |
| CTTAATCAACCGAGGTCCAT+CGG | + | chr6.2:78794965-78794984 | MS.gene58862:intron | 45.0% | |
| CTTCCAATTGCCGAAGCATA+TGG | - | chr6.2:78796382-78796401 | None:intergenic | 45.0% | |
| CTTCTCGATAGACAAGCACT+TGG | + | chr6.2:78793294-78793313 | MS.gene58862:CDS | 45.0% | |
| CTTGTTCACTCCGATGTTTG+GGG | + | chr6.2:78794554-78794573 | MS.gene58862:intron | 45.0% | |
| GAAGTAATGCTTCCCACCAA+TGG | - | chr6.2:78794597-78794616 | None:intergenic | 45.0% | |
| GAATCAAGAGGCGAAAGATG+AGG | + | chr6.2:78793905-78793924 | MS.gene58862:CDS | 45.0% | |
| GAATCCTTTGACCACTAGTC+GGG | - | chr6.2:78795684-78795703 | None:intergenic | 45.0% | |
| GACAGAGTTAGGATTCATGC+AGG | + | chr6.2:78796774-78796793 | MS.gene58862:intron | 45.0% | |
| GAGGTGATTGTTCTTTGGCT+AGG | - | chr6.2:78796324-78796343 | None:intergenic | 45.0% | |
| GCTTGTTCACTCCGATGTTT+GGG | + | chr6.2:78794553-78794572 | MS.gene58862:intron | 45.0% | |
| GGAAAGAGAATATGGTGTGC+AGG | + | chr6.2:78795897-78795916 | MS.gene58862:intron | 45.0% | |
| GGAACTAGCTAAGTTACCCA+TGG | + | chr6.2:78795586-78795605 | MS.gene58862:intron | 45.0% | |
| GGAATCCTTTGACCACTAGT+CGG | - | chr6.2:78795685-78795704 | None:intergenic | 45.0% | |
| GGTACTCTTTACAAGACAGC+TGG | + | chr6.2:78794308-78794327 | MS.gene58862:intron | 45.0% | |
| GGTCCGGCAAAGAAAATTCT+TGG | + | chr6.2:78796166-78796185 | MS.gene58862:intron | 45.0% | |
| GTCTTCAAGTGGGAGATTGT+TGG | + | chr6.2:78797088-78797107 | MS.gene58862:intron | 45.0% | |
| TAATGCTTCCCACCAATGGA+TGG | - | chr6.2:78794593-78794612 | None:intergenic | 45.0% | |
| TACATACTCAGCCTCTGTAG+TGG | - | chr6.2:78796707-78796726 | None:intergenic | 45.0% | |
| TAGTCAGAGTGCGATACATC+TGG | + | chr6.2:78796819-78796838 | MS.gene58862:intron | 45.0% | |
| TCAGCTACACCATTGTGTTG+GGG | - | chr6.2:78794846-78794865 | None:intergenic | 45.0% | |
| TCGCCTCTTGATTCTTTGCT+GGG | - | chr6.2:78793899-78793918 | None:intergenic | 45.0% | |
| TCTGACAATTCCTCTGACTG+GGG | - | chr6.2:78795338-78795357 | None:intergenic | 45.0% | |
| TCTTGTAAGGTTGTGGGCAA+AGG | + | chr6.2:78794101-78794120 | MS.gene58862:CDS | 45.0% | |
| TGATGAAGCATGTCAGACCA+CGG | + | chr6.2:78795499-78795518 | MS.gene58862:CDS | 45.0% | |
| TGTCTTCCCTACCAGATAGT+TGG | + | chr6.2:78793580-78793599 | MS.gene58862:CDS | 45.0% | |
| TGTTGTTGGACCCCAAACAT+CGG | - | chr6.2:78794567-78794586 | None:intergenic | 45.0% | |
| TTCGCCTCTTGATTCTTTGC+TGG | - | chr6.2:78793900-78793919 | None:intergenic | 45.0% | |
| TTCTCAGTGAAGAGATCCGA+CGG | + | chr6.2:78793676-78793695 | MS.gene58862:CDS | 45.0% | |
| TTTACCACGTCCATTTCCTC+TGG | - | chr6.2:78793766-78793785 | None:intergenic | 45.0% | |
| TTTACGCTTCGGATGACAGA+AGG | + | chr6.2:78793456-78793475 | MS.gene58862:CDS | 45.0% | |
| TTTCCACTCCATACCTCTTC+TGG | - | chr6.2:78795011-78795030 | None:intergenic | 45.0% | |
| ! | AGAAGTTTTGCTACGAGCAC+GGG | + | chr6.2:78794790-78794809 | MS.gene58862:intron | 45.0% |
| ! | AGAGGTATGGAGTGGAAAAG+AGG | + | chr6.2:78795013-78795032 | MS.gene58862:intron | 45.0% |
| ! | AGCTTGTTCACTCCGATGTT+TGG | + | chr6.2:78794552-78794571 | MS.gene58862:intron | 45.0% |
| ! | AGGCGAAAATGACTTGCCAA+CGG | - | chr6.2:78796304-78796323 | None:intergenic | 45.0% |
| ! | AGTAAGATGCACTGGTGTGT+CGG | - | chr6.2:78795381-78795400 | None:intergenic | 45.0% |
| ! | ATACCAGAAGAGGTATGGAG+TGG | + | chr6.2:78795005-78795024 | MS.gene58862:intron | 45.0% |
| ! | GATCACCGAAGAAGTACAAC+TGG | + | chr6.2:78796613-78796632 | MS.gene58862:intron | 45.0% |
| ! | TGAAGTGCCTTCTTTCCCAT+GGG | - | chr6.2:78795605-78795624 | None:intergenic | 45.0% |
| ! | TGTTTTCATCATCCCAGAGG+CGG | - | chr6.2:78795169-78795188 | None:intergenic | 45.0% |
| ! | TTGGTACTGGAGCAGTTAGT+TGG | + | chr6.2:78796650-78796669 | MS.gene58862:intron | 45.0% |
| !! | TGTCGCTTTATCCACTACAG+AGG | + | chr6.2:78796693-78796712 | MS.gene58862:intron | 45.0% |
| AAAGCCCGACTAGTGGTCAA+AGG | + | chr6.2:78795677-78795696 | MS.gene58862:intron | 50.0% | |
| AAGCTCAGAACCGACAATGG+TGG | + | chr6.2:78794744-78794763 | MS.gene58862:intron | 50.0% | |
| AAGTTCGATGGTGCGGACTT+TGG | + | chr6.2:78793171-78793190 | MS.gene58862:CDS | 50.0% | |
| ACAGTAGCGCTCCAACTATC+TGG | - | chr6.2:78793594-78793613 | None:intergenic | 50.0% | |
| AGATGAGATTCCCCAGTCAG+AGG | + | chr6.2:78795325-78795344 | MS.gene58862:CDS | 50.0% | |
| AGCGCTCCAACTATCTGGTA+GGG | - | chr6.2:78793589-78793608 | None:intergenic | 50.0% | |
| ATAGCTCGCGGTAGAAAGAG+TGG | + | chr6.2:78794287-78794306 | MS.gene58862:intron | 50.0% | |
| ATCTCATCTGTGGGACTTCC+TGG | - | chr6.2:78795314-78795333 | None:intergenic | 50.0% | |
| ATGCAGTGGGAGTTGTTAGC+AGG | + | chr6.2:78796443-78796462 | MS.gene58862:intron | 50.0% | |
| ATGCTTCCCACCAATGGATG+GGG | - | chr6.2:78794591-78794610 | None:intergenic | 50.0% | |
| ATGGCCTGAAACAAGCTCCA+AGG | + | chr6.2:78795936-78795955 | MS.gene58862:intron | 50.0% | |
| ATTCACCCAACTCTCTCCGT+CGG | - | chr6.2:78793695-78793714 | None:intergenic | 50.0% | |
| CAACATGGGTGATGCCAAAC+CGG | + | chr6.2:78796270-78796289 | MS.gene58862:intron | 50.0% | |
| CAAGAGATGGAAAGCCATGG+TGG | + | chr6.2:78794694-78794713 | MS.gene58862:intron | 50.0% | |
| CAGTCTTCCACGGTGATGAT+TGG | + | chr6.2:78794240-78794259 | MS.gene58862:intron | 50.0% | |
| CGAATGGAAAGAACTGTGCC+AGG | + | chr6.2:78794816-78794835 | MS.gene58862:intron | 50.0% | |
| CGAGTAAAGGAGGACCATGA+TGG | + | chr6.2:78795641-78795660 | MS.gene58862:intron | 50.0% | |
| CTCTGGTCTCTTACTCTAGC+AGG | - | chr6.2:78797026-78797045 | None:intergenic | 50.0% | |
| CTTAATCTCCGTAGGCCAGT+TGG | + | chr6.2:78794199-78794218 | MS.gene58862:intron | 50.0% | |
| GACTGGGGAATCTCATCTGT+GGG | - | chr6.2:78795323-78795342 | None:intergenic | 50.0% | |
| GAGATACAAAGCCCGACTAG+TGG | + | chr6.2:78795670-78795689 | MS.gene58862:intron | 50.0% | |
| GAGTCTTGGGTGTTAGACTC+TGG | + | chr6.2:78793990-78794009 | MS.gene58862:CDS | 50.0% | |
| GCAAAAGAGAAAACCACCGC+TGG | + | chr6.2:78793360-78793379 | MS.gene58862:CDS | 50.0% | |
| GCTCAGCTACACCATTGTGT+TGG | - | chr6.2:78794848-78794867 | None:intergenic | 50.0% | |
| GCTCCCAGCAAAGAATCAAG+AGG | + | chr6.2:78793893-78793912 | MS.gene58862:CDS | 50.0% | |
| GCTTCCCAATGAGCTTTACC+TGG | - | chr6.2:78796481-78796500 | None:intergenic | 50.0% | |
| GCTTCTGCCCAGAAGTTCTT+TGG | - | chr6.2:78794927-78794946 | None:intergenic | 50.0% | |
| GGAACTGGAGTAAGATGCAC+TGG | - | chr6.2:78795389-78795408 | None:intergenic | 50.0% | |
| GGAGAGCAAGGAAGAGTCTT+GGG | + | chr6.2:78793977-78793996 | MS.gene58862:CDS | 50.0% | |
| GGCTACACAACAGTCTTCCA+CGG | + | chr6.2:78794230-78794249 | MS.gene58862:intron | 50.0% | |
| GTAGAGATGGACGATGTTCC+AGG | + | chr6.2:78795293-78795312 | MS.gene58862:CDS | 50.0% | |
| TAGCGCTCCAACTATCTGGT+AGG | - | chr6.2:78793590-78793609 | None:intergenic | 50.0% | |
| TCAACCAGAGGAAATGGACG+TGG | + | chr6.2:78793759-78793778 | MS.gene58862:CDS | 50.0% | |
| TGAAACAAGCTCCAAGGCAG+TGG | + | chr6.2:78795942-78795961 | MS.gene58862:intron | 50.0% | |
| TGACTGGGGAATCTCATCTG+TGG | - | chr6.2:78795324-78795343 | None:intergenic | 50.0% | |
| TGAGGCGGTTGTTTACGCTT+CGG | + | chr6.2:78793445-78793464 | MS.gene58862:CDS | 50.0% | |
| TGGAGAGCAAGGAAGAGTCT+TGG | + | chr6.2:78793976-78793995 | MS.gene58862:CDS | 50.0% | |
| TGTACGCAATGGTCTGTACG+AGG | + | chr6.2:78796407-78796426 | MS.gene58862:intron | 50.0% | |
| ! | AATGTTGCTTCCACCTCAGG+AGG | + | chr6.2:78793930-78793949 | MS.gene58862:CDS | 50.0% |
| ! | ACTGCCTTGGAGCTTGTTTC+AGG | - | chr6.2:78795943-78795962 | None:intergenic | 50.0% |
| ! | CACCGAGATTTTTGCTCCAG+TGG | + | chr6.2:78795727-78795746 | MS.gene58862:intron | 50.0% |
| ! | CCAGACATTGGCTATGCAGT+GGG | + | chr6.2:78796430-78796449 | MS.gene58862:intron | 50.0% |
| ! | GCAAATGTTGCTTCCACCTC+AGG | + | chr6.2:78793927-78793946 | MS.gene58862:CDS | 50.0% |
| ! | GTGAAGTGCCTTCTTTCCCA+TGG | - | chr6.2:78795606-78795625 | None:intergenic | 50.0% |
| ! | TTATGCTCCAATGGCACCGA+TGG | - | chr6.2:78794984-78795003 | None:intergenic | 50.0% |
| !! | AACCACCGCTGGTCTTATGA+AGG | + | chr6.2:78793371-78793390 | MS.gene58862:CDS | 50.0% |
| !!! | ATGGTGCGGACTTTGGCTTT+TGG | + | chr6.2:78793178-78793197 | MS.gene58862:CDS | 50.0% |
| !!! | GACTCTGGAGCGTCTTTTCA+TGG | + | chr6.2:78794005-78794024 | MS.gene58862:CDS | 50.0% |
| AATGGTCGGCGTTGCACTTC+TGG | - | chr6.2:78796006-78796025 | None:intergenic | 55.0% | |
| ACAACAGCCCCATCCATTGG+TGG | + | chr6.2:78794581-78794600 | MS.gene58862:intron | 55.0% | |
| ACAGCTGTGAGTAGCTCCTC+GGG | + | chr6.2:78793615-78793634 | MS.gene58862:CDS | 55.0% | |
| ACGCTTCGGATGACAGAAGG+CGG | + | chr6.2:78793459-78793478 | MS.gene58862:CDS | 55.0% | |
| AGAAGCTTGCGTGTGCAGTC+AGG | + | chr6.2:78794897-78794916 | MS.gene58862:intron | 55.0% | |
| AGAAGGCTGCTGCATGATCG+AGG | + | chr6.2:78797044-78797063 | MS.gene58862:intron | 55.0% | |
| AGACCACGGATGCCAGTAAG+TGG | + | chr6.2:78795513-78795532 | MS.gene58862:intron | 55.0% | |
| AGAGATCCGACGGAGAGAGT+TGG | + | chr6.2:78793686-78793705 | MS.gene58862:CDS | 55.0% | |
| AGCCTTCATAAGACCAGCGG+TGG | - | chr6.2:78793376-78793395 | None:intergenic | 55.0% | |
| ATGAGTTTGGCTACCGCCTC+TGG | + | chr6.2:78795153-78795172 | MS.gene58862:intron | 55.0% | |
| CAAACCGGTTAGCACACCGT+TGG | + | chr6.2:78796285-78796304 | MS.gene58862:intron | 55.0% | |
| CAACAGCCCCATCCATTGGT+GGG | + | chr6.2:78794582-78794601 | MS.gene58862:intron | 55.0% | |
| CAACGGTGTGCTAACCGGTT+TGG | - | chr6.2:78796287-78796306 | None:intergenic | 55.0% | |
| CACAGCTGTGAGTAGCTCCT+CGG | + | chr6.2:78793614-78793633 | MS.gene58862:CDS | 55.0% | |
| CATGGCAAGCTCCCACTTAC+TGG | - | chr6.2:78795528-78795547 | None:intergenic | 55.0% | |
| CCAACAACAGCCCCATCCAT+TGG | + | chr6.2:78794578-78794597 | MS.gene58862:intron | 55.0% | |
| CCAATGGATGGGGCTGTTGT+TGG | - | chr6.2:78794581-78794600 | None:intergenic | 55.0% | |
| CCAGGTACTCCCCAACACAA+TGG | + | chr6.2:78794834-78794853 | MS.gene58862:intron | 55.0% | |
| CCCACTGCATAGCCAATGTC+TGG | - | chr6.2:78796433-78796452 | None:intergenic | 55.0% | |
| CTCGCTCAATCCTGAGTCGT+TGG | - | chr6.2:78795264-78795283 | None:intergenic | 55.0% | |
| CTTGCCAACGGTGTGCTAAC+CGG | - | chr6.2:78796292-78796311 | None:intergenic | 55.0% | |
| GACACAACCACCAACGACTC+AGG | + | chr6.2:78795251-78795270 | MS.gene58862:intron | 55.0% | |
| GACCACGGATGCCAGTAAGT+GGG | + | chr6.2:78795514-78795533 | MS.gene58862:intron | 55.0% | |
| GAGATCCGACGGAGAGAGTT+GGG | + | chr6.2:78793687-78793706 | MS.gene58862:CDS | 55.0% | |
| GATCATGCAGCAGCCTTCTC+TGG | - | chr6.2:78797043-78797062 | None:intergenic | 55.0% | |
| GATGACAGAAGGCGGATCAG+TGG | + | chr6.2:78793467-78793486 | MS.gene58862:CDS | 55.0% | |
| GCTCAATCCTGAGTCGTTGG+TGG | - | chr6.2:78795261-78795280 | None:intergenic | 55.0% | |
| GGTGCAATGACGATAGCTCG+CGG | + | chr6.2:78794275-78794294 | MS.gene58862:intron | 55.0% | |
| GTCTGTACGAGGCCAGACAT+TGG | + | chr6.2:78796418-78796437 | MS.gene58862:intron | 55.0% | |
| GTGGGAGATTGTTGGTGTGC+AGG | + | chr6.2:78797096-78797115 | MS.gene58862:intron | 55.0% | |
| TGACTGCACACGCAAGCTTC+TGG | - | chr6.2:78794898-78794917 | None:intergenic | 55.0% | |
| TGAGTTTGGCTACCGCCTCT+GGG | + | chr6.2:78795154-78795173 | MS.gene58862:intron | 55.0% | |
| TGTAGCCTTCGTCAGCCAAC+TGG | - | chr6.2:78794217-78794236 | None:intergenic | 55.0% | |
| ! | AGATGCACTGGTGTGTCGGA+CGG | - | chr6.2:78795377-78795396 | None:intergenic | 55.0% |
| ! | GCCAGACATTGGCTATGCAG+TGG | + | chr6.2:78796429-78796448 | MS.gene58862:intron | 55.0% |
| ! | TTCGTCAGCCAACTGGCCTA+CGG | - | chr6.2:78794210-78794229 | None:intergenic | 55.0% |
| !! | CCATTGTGTTGGGGAGTACC+TGG | - | chr6.2:78794837-78794856 | None:intergenic | 55.0% |
| CTACGAGCACGGGATCCGAA+TGG | + | chr6.2:78794800-78794819 | MS.gene58862:intron | 60.0% | |
| CTCCCACTTACTGGCATCCG+TGG | - | chr6.2:78795519-78795538 | None:intergenic | 60.0% | |
| GTAGGCCAGTTGGCTGACGA+AGG | + | chr6.2:78794209-78794228 | MS.gene58862:intron | 60.0% | |
| GTTGCTTCCACCTCAGGAGG+AGG | + | chr6.2:78793933-78793952 | MS.gene58862:CDS | 60.0% | |
| !! | CCAATGGCACCGATGGACCT+CGG | - | chr6.2:78794977-78794996 | None:intergenic | 60.0% |
| CAACGCGTCACCTCCTCCTG+AGG | - | chr6.2:78793946-78793965 | None:intergenic | 65.0% | |
| !! | CCGAGGTCCATCGGTGCCAT+TGG | + | chr6.2:78794974-78794993 | MS.gene58862:intron | 65.0% |
| CGCGTCACCTCCTCCTGAGG+TGG | - | chr6.2:78793943-78793962 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 78793138 | 78797285 | 78793138 | ID=MS.gene58862 |
| chr6.2 | mRNA | 78793138 | 78797285 | 78793138 | ID=MS.gene58862.t1;Parent=MS.gene58862 |
| chr6.2 | exon | 78793138 | 78794122 | 78793138 | ID=MS.gene58862.t1.exon1;Parent=MS.gene58862.t1 |
| chr6.2 | CDS | 78793138 | 78794122 | 78793138 | ID=cds.MS.gene58862.t1;Parent=MS.gene58862.t1 |
| chr6.2 | exon | 78795273 | 78795527 | 78795273 | ID=MS.gene58862.t1.exon2;Parent=MS.gene58862.t1 |
| chr6.2 | CDS | 78795273 | 78795527 | 78795273 | ID=cds.MS.gene58862.t1;Parent=MS.gene58862.t1 |
| chr6.2 | exon | 78796955 | 78797031 | 78796955 | ID=MS.gene58862.t1.exon3;Parent=MS.gene58862.t1 |
| chr6.2 | CDS | 78796955 | 78797031 | 78796955 | ID=cds.MS.gene58862.t1;Parent=MS.gene58862.t1 |
| chr6.2 | exon | 78797118 | 78797285 | 78797118 | ID=MS.gene58862.t1.exon4;Parent=MS.gene58862.t1 |
| chr6.2 | CDS | 78797118 | 78797285 | 78797118 | ID=cds.MS.gene58862.t1;Parent=MS.gene58862.t1 |
| Gene Sequence |
| Protein sequence |
