Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58912.t1 | XP_013442679.1 | 95.9 | 320 | 12 | 1 | 16 | 335 | 18 | 336 | 1.30E-162 | 582.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58912.t1 | Q9SUC9 | 40.4 | 324 | 159 | 9 | 10 | 325 | 7 | 304 | 2.9e-49 | 197.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58912.t1 | G8A0D6 | 95.9 | 320 | 12 | 1 | 16 | 335 | 18 | 336 | 9.6e-163 | 582.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055428 | MS.gene58912 | 0.804893 | 1.74E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58912.t1 | MTR_0110s0010 | 95.821 | 335 | 13 | 1 | 1 | 335 | 3 | 336 | 0.0 | 640 |
| MS.gene58912.t1 | MTR_8g106870 | 60.580 | 345 | 114 | 9 | 3 | 335 | 1 | 335 | 6.79e-132 | 379 |
| MS.gene58912.t1 | MTR_2g047975 | 39.871 | 311 | 157 | 12 | 26 | 323 | 20 | 313 | 2.92e-67 | 214 |
| MS.gene58912.t1 | MTR_4g051000 | 42.909 | 275 | 123 | 8 | 45 | 307 | 25 | 277 | 1.92e-64 | 206 |
| MS.gene58912.t1 | MTR_2g089530 | 42.909 | 275 | 123 | 8 | 45 | 307 | 25 | 277 | 1.92e-64 | 206 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58912.t1 | AT3G18050 | 53.012 | 332 | 125 | 9 | 10 | 325 | 11 | 327 | 2.32e-103 | 307 |
| MS.gene58912.t1 | AT4G28100 | 41.481 | 270 | 135 | 8 | 36 | 301 | 26 | 276 | 8.71e-65 | 207 |
Find 63 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTAATGTTGTTGGGAAAA+TGG | 0.205495 | 6.1:-71597879 | None:intergenic |
| CTTTAACATAAGATTGTTCT+TGG | 0.214285 | 6.1:-71597913 | None:intergenic |
| CAAGAACAATCTTATGTTAA+AGG | 0.223232 | 6.1:+71597914 | MS.gene58912:CDS |
| AATGCATCAGGACAATTAAA+AGG | 0.223886 | 6.1:-71598274 | None:intergenic |
| ATGCTTGAATAGTCTCTATT+TGG | 0.231094 | 6.1:+71598414 | MS.gene58912:CDS |
| TTGTTGGGAAAATGGGATTA+AGG | 0.244672 | 6.1:-71597871 | None:intergenic |
| TTTGTTCTTGTTACTTTGTT+TGG | 0.257627 | 6.1:+71600162 | MS.gene58912:CDS |
| TGTATTGTTATTGTGGAATT+AGG | 0.288348 | 6.1:+71598245 | MS.gene58912:CDS |
| AGTTCATTTGAGAGAGATAA+AGG | 0.312739 | 6.1:-71597941 | None:intergenic |
| CAACAAAGATTGTGAGCTAA+TGG | 0.313129 | 6.1:+71599937 | MS.gene58912:CDS |
| AGACAAAGTTGGTTGGAGTT+TGG | 0.338347 | 6.1:-71600134 | None:intergenic |
| AGGGTTGATGATGTTGAGTT+TGG | 0.342737 | 6.1:-71597851 | None:intergenic |
| ATCTTTGTTGTGAATCTTTG+TGG | 0.352616 | 6.1:-71599924 | None:intergenic |
| AAGAACAATCTTATGTTAAA+GGG | 0.360626 | 6.1:+71597915 | MS.gene58912:CDS |
| GTTAATGTTGTTGGGAAAAT+GGG | 0.361945 | 6.1:-71597878 | None:intergenic |
| GGTAATGGATTTCAAGGTCT+TGG | 0.363694 | 6.1:+71598379 | MS.gene58912:CDS |
| TGTTGGGAAAATGGGATTAA+GGG | 0.381048 | 6.1:-71597870 | None:intergenic |
| AGAAGAGAATGTAGAGGAAA+AGG | 0.401985 | 6.1:-71597802 | None:intergenic |
| ATCATCATTTGACATGCCTT+TGG | 0.404706 | 6.1:+71598126 | MS.gene58912:CDS |
| ACCAGATCACAACTCTCATT+TGG | 0.407968 | 6.1:-71598223 | None:intergenic |
| GAAGGGATTGTTAATGTTGT+TGG | 0.415245 | 6.1:-71597887 | None:intergenic |
| TAAGATTGTTCTTGGAATGA+AGG | 0.431330 | 6.1:-71597905 | None:intergenic |
| CATGGCTTCTGTCGAAGAAT+CGG | 0.431525 | 6.1:+71599966 | MS.gene58912:CDS |
| AGGAAAAGGATCATGAGATA+TGG | 0.433767 | 6.1:-71597788 | None:intergenic |
| TTGGAGATGGAAGTGTTAGA+AGG | 0.438920 | 6.1:+71598323 | MS.gene58912:CDS |
| AAGGGATTGTTAATGTTGTT+GGG | 0.448059 | 6.1:-71597886 | None:intergenic |
| AGATGGAAGTGTTAGAAGGT+TGG | 0.448408 | 6.1:+71598327 | MS.gene58912:CDS |
| GATCTGGTGTATTGTTATTG+TGG | 0.449930 | 6.1:+71598238 | MS.gene58912:CDS |
| TTTGTAACAGAAAATGCATC+AGG | 0.450155 | 6.1:-71598286 | None:intergenic |
| TGGAGAAGAATTGCTTGAGT+AGG | 0.462891 | 6.1:+71598347 | MS.gene58912:CDS |
| TATAACCATGCTGCAAGAAC+AGG | 0.468658 | 6.1:-71598040 | None:intergenic |
| AACAAAGATTGTGAGCTAAT+GGG | 0.472319 | 6.1:+71599938 | MS.gene58912:CDS |
| CGCGCTTTGCTGTTGAACAA+AGG | 0.483927 | 6.1:+71600022 | MS.gene58912:CDS |
| AGTGGAGAACTTGTTGGAGA+TGG | 0.493754 | 6.1:+71598310 | MS.gene58912:CDS |
| CTCTCAAATGAACTCTTCAA+TGG | 0.501979 | 6.1:+71597950 | MS.gene58912:CDS |
| AAGATTGTTCTTGGAATGAA+GGG | 0.502562 | 6.1:-71597904 | None:intergenic |
| TCAGATGAATCAACAGCTAA+AGG | 0.503505 | 6.1:-71600088 | None:intergenic |
| ATGTGTGGATGGTTTGGAAA+AGG | 0.516088 | 6.1:+71598168 | MS.gene58912:CDS |
| GAAAAGGCTTTGAAAGTGAG+AGG | 0.517885 | 6.1:+71598184 | MS.gene58912:CDS |
| ATGCATCAGGACAATTAAAA+GGG | 0.535777 | 6.1:-71598273 | None:intergenic |
| TCTGAGTCATCTGGTACCAA+AGG | 0.542932 | 6.1:-71598142 | None:intergenic |
| ATTCAAGCAAAGAAGAAGAC+AGG | 0.547183 | 6.1:+71599900 | MS.gene58912:CDS |
| TTGGTCTGATTTAAGTCATG+AGG | 0.554554 | 6.1:-71600212 | None:intergenic |
| CTATTTAGAGTGCATGATTG+TGG | 0.557315 | 6.1:-71600055 | None:intergenic |
| AATGGATTTCAAGGTCTTGG+AGG | 0.558012 | 6.1:+71598382 | MS.gene58912:CDS |
| GCCAAATGAGAGTTGTGATC+TGG | 0.559658 | 6.1:+71598222 | MS.gene58912:CDS |
| AACAAAGAAAGAGACAAAGT+TGG | 0.568133 | 6.1:-71600145 | None:intergenic |
| AAGAAAGAGACAAAGTTGGT+TGG | 0.568482 | 6.1:-71600141 | None:intergenic |
| ACGACGACGATGATGATGAA+TGG | 0.569447 | 6.1:-71598093 | None:intergenic |
| TCATGCACTCTAAATAGTGA+TGG | 0.573743 | 6.1:+71600061 | MS.gene58912:CDS |
| AGGATCATGAGATATGGAAG+TGG | 0.574801 | 6.1:-71597782 | None:intergenic |
| TGAGTGAGACTCATGTAGGA+AGG | 0.575617 | 6.1:-71597827 | None:intergenic |
| GTGAGCTAATGGGCTTGACA+TGG | 0.576016 | 6.1:+71599948 | MS.gene58912:CDS |
| GAACAGGACAACATCGGCTA+CGG | 0.579954 | 6.1:-71598024 | None:intergenic |
| AAGGGAAGAAGAGAATGTAG+AGG | 0.587484 | 6.1:-71597808 | None:intergenic |
| GCTTTGCTGTTGAACAAAGG+TGG | 0.597774 | 6.1:+71600025 | MS.gene58912:CDS |
| GTTGTCCTGTTCTTGCAGCA+TGG | 0.598312 | 6.1:+71598035 | MS.gene58912:CDS |
| GAGTGAGACTCATGTAGGAA+GGG | 0.607216 | 6.1:-71597826 | None:intergenic |
| TGGATGAGTGAGACTCATGT+AGG | 0.607867 | 6.1:-71597831 | None:intergenic |
| CTGCAAGAACAGGACAACAT+CGG | 0.659169 | 6.1:-71598030 | None:intergenic |
| GCATGTAGTTCATCAAAACA+TGG | 0.668065 | 6.1:+71597983 | MS.gene58912:CDS |
| GCTTCTGTCGAAGAATCGGA+CGG | 0.672965 | 6.1:+71599970 | MS.gene58912:CDS |
| TCGGACGGCTTATATTCACA+TGG | 0.704145 | 6.1:+71599985 | MS.gene58912:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTATAATTTTTGTAGA+AGG | - | chr6.1:71598448-71598467 | None:intergenic | 10.0% |
| !!! | TTTTTAAGTAAAAAACATTT+TGG | - | chr6.1:71599766-71599785 | None:intergenic | 10.0% |
| !! | AATAAGATTAAAACAACTTA+TGG | - | chr6.1:71598808-71598827 | None:intergenic | 15.0% |
| !! | GTTTATAGTTTATATGAAAA+CGG | + | chr6.1:71598861-71598880 | MS.gene58912:intron | 15.0% |
| !!! | AAATCTTGTTTTACAAATAT+AGG | - | chr6.1:71599313-71599332 | None:intergenic | 15.0% |
| !!! | CAATTATTTATGTATTGTTT+TGG | - | chr6.1:71599484-71599503 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTCAAATGTAAG+TGG | + | chr6.1:71599526-71599545 | MS.gene58912:intron | 15.0% |
| !! | AAGAACAATCTTATGTTAAA+GGG | + | chr6.1:71597915-71597934 | MS.gene58912:CDS | 20.0% |
| !! | GAAAGAAATATAAGCAAAAA+TGG | - | chr6.1:71598684-71598703 | None:intergenic | 20.0% |
| !! | GATATATGACTCAAAAAAAA+TGG | + | chr6.1:71599286-71599305 | MS.gene58912:intron | 20.0% |
| !! | TTGTTTATATTTCATTCCAA+AGG | - | chr6.1:71598621-71598640 | None:intergenic | 20.0% |
| !!! | CTTAATTTCTAGAAACATTA+AGG | - | chr6.1:71599098-71599117 | None:intergenic | 20.0% |
| !!! | GTTTTAATCTTATTTCCATA+AGG | + | chr6.1:71598814-71598833 | MS.gene58912:intron | 20.0% |
| !!! | TTTAGAATATGAAACAAAAG+TGG | - | chr6.1:71599838-71599857 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATATTTCTTTC+CGG | + | chr6.1:71598684-71598703 | MS.gene58912:intron | 20.0% |
| ! | AACCATCATACATTAATGTT+TGG | - | chr6.1:71598983-71599002 | None:intergenic | 25.0% |
| ! | ATCCAAACATTAATGTATGA+TGG | + | chr6.1:71598978-71598997 | MS.gene58912:intron | 25.0% |
| ! | CAAGAACAATCTTATGTTAA+AGG | + | chr6.1:71597914-71597933 | MS.gene58912:CDS | 25.0% |
| ! | CTTTAACATAAGATTGTTCT+TGG | - | chr6.1:71597916-71597935 | None:intergenic | 25.0% |
| ! | TGTTGAAAATTGATGAAGAT+TGG | + | chr6.1:71598536-71598555 | MS.gene58912:intron | 25.0% |
| ! | TTGGTTGCAAAATAATTTCA+AGG | + | chr6.1:71599242-71599261 | MS.gene58912:intron | 25.0% |
| !! | TAACTCTCTTTTGTTAACTT+TGG | + | chr6.1:71599223-71599242 | MS.gene58912:intron | 25.0% |
| !! | TGTATTGTTATTGTGGAATT+AGG | + | chr6.1:71598245-71598264 | MS.gene58912:CDS | 25.0% |
| !!! | AAAAATGGTAATGGATTTCA+AGG | + | chr6.1:71598373-71598392 | MS.gene58912:CDS | 25.0% |
| !!! | ATGTTTTGATGTTCTTTGTT+TGG | + | chr6.1:71598484-71598503 | MS.gene58912:intron | 25.0% |
| !!! | TTTATGTATTGTTTTGGTTG+AGG | - | chr6.1:71599478-71599497 | None:intergenic | 25.0% |
| !!! | TTTGTTCTTGTTACTTTGTT+TGG | + | chr6.1:71600162-71600181 | MS.gene58912:CDS | 25.0% |
| AACAAAGAAAGAGACAAAGT+TGG | - | chr6.1:71600148-71600167 | None:intergenic | 30.0% | |
| AACAAAGATTGTGAGCTAAT+GGG | + | chr6.1:71599938-71599957 | MS.gene58912:CDS | 30.0% | |
| AAGATTGTTCTTGGAATGAA+GGG | - | chr6.1:71597907-71597926 | None:intergenic | 30.0% | |
| AAGGGATTGTTAATGTTGTT+GGG | - | chr6.1:71597889-71597908 | None:intergenic | 30.0% | |
| AATGCATCAGGACAATTAAA+AGG | - | chr6.1:71598277-71598296 | None:intergenic | 30.0% | |
| AGTAGGAAGAAAAATGGTAA+TGG | + | chr6.1:71598364-71598383 | MS.gene58912:CDS | 30.0% | |
| AGTTCATTTGAGAGAGATAA+AGG | - | chr6.1:71597944-71597963 | None:intergenic | 30.0% | |
| ATCTTCAAAACTCTACTTCA+AGG | - | chr6.1:71599717-71599736 | None:intergenic | 30.0% | |
| ATGATAGCATAAAAGAGGTT+TGG | - | chr6.1:71599800-71599819 | None:intergenic | 30.0% | |
| ATGCATCAGGACAATTAAAA+GGG | - | chr6.1:71598276-71598295 | None:intergenic | 30.0% | |
| ATGCTTGAATAGTCTCTATT+TGG | + | chr6.1:71598414-71598433 | MS.gene58912:CDS | 30.0% | |
| ATGTGTAATTCATAGACTAC+TGG | + | chr6.1:71599035-71599054 | MS.gene58912:intron | 30.0% | |
| CACACACTTAAACTTTGATT+AGG | + | chr6.1:71599672-71599691 | MS.gene58912:intron | 30.0% | |
| CTACATAAACCTAGTCAATT+TGG | + | chr6.1:71599380-71599399 | MS.gene58912:intron | 30.0% | |
| CTTTGTGACATTGAATTTGA+TGG | + | chr6.1:71598509-71598528 | MS.gene58912:intron | 30.0% | |
| GAATGATGATAGCATAAAAG+AGG | - | chr6.1:71599805-71599824 | None:intergenic | 30.0% | |
| GTTAATGTTGTTGGGAAAAT+GGG | - | chr6.1:71597881-71597900 | None:intergenic | 30.0% | |
| TAAGATTGTTCTTGGAATGA+AGG | - | chr6.1:71597908-71597927 | None:intergenic | 30.0% | |
| TGTTAATGTTGTTGGGAAAA+TGG | - | chr6.1:71597882-71597901 | None:intergenic | 30.0% | |
| TTTGTAACAGAAAATGCATC+AGG | - | chr6.1:71598289-71598308 | None:intergenic | 30.0% | |
| ! | ATCTTTGTTGTGAATCTTTG+TGG | - | chr6.1:71599927-71599946 | None:intergenic | 30.0% |
| ! | GCATTTTCTGTTACAAAAAG+TGG | + | chr6.1:71598292-71598311 | MS.gene58912:CDS | 30.0% |
| ! | TGGTACAACAGAATAACTTT+TGG | + | chr6.1:71599138-71599157 | MS.gene58912:intron | 30.0% |
| ! | TTTCATTCCAAAGGAGTATA+TGG | - | chr6.1:71598612-71598631 | None:intergenic | 30.0% |
| !! | ATGATGATGAATGGTTTTCA+AGG | - | chr6.1:71598087-71598106 | None:intergenic | 30.0% |
| !! | TGATGATGAATGGTTTTCAA+GGG | - | chr6.1:71598086-71598105 | None:intergenic | 30.0% |
| !! | TTGGTTCTGTAGTTTAGATA+TGG | + | chr6.1:71599157-71599176 | MS.gene58912:intron | 30.0% |
| !!! | GAAGTGTTTTTTCAATGCTT+TGG | + | chr6.1:71599010-71599029 | MS.gene58912:intron | 30.0% |
| AAGGTGTAGCTCGATAATAT+GGG | - | chr6.1:71599636-71599655 | None:intergenic | 35.0% | |
| ACAAAAAGTGGAGAACTTGT+TGG | + | chr6.1:71598304-71598323 | MS.gene58912:CDS | 35.0% | |
| AGAAAAATGTGTGGATGGTT+TGG | + | chr6.1:71598162-71598181 | MS.gene58912:CDS | 35.0% | |
| AGAAGAGAATGTAGAGGAAA+AGG | - | chr6.1:71597805-71597824 | None:intergenic | 35.0% | |
| AGATGACTCAGAAAAATGTG+TGG | + | chr6.1:71598153-71598172 | MS.gene58912:CDS | 35.0% | |
| AGGAAAAGGATCATGAGATA+TGG | - | chr6.1:71597791-71597810 | None:intergenic | 35.0% | |
| ATATTATCGAGCTACACCTT+CGG | + | chr6.1:71599636-71599655 | MS.gene58912:intron | 35.0% | |
| ATCATCATTTGACATGCCTT+TGG | + | chr6.1:71598126-71598145 | MS.gene58912:CDS | 35.0% | |
| ATGTTCTTCTTCTTAGTGCA+AGG | + | chr6.1:71599403-71599422 | MS.gene58912:intron | 35.0% | |
| ATTCAAGCAAAGAAGAAGAC+AGG | + | chr6.1:71599900-71599919 | MS.gene58912:CDS | 35.0% | |
| CAACAAAGATTGTGAGCTAA+TGG | + | chr6.1:71599937-71599956 | MS.gene58912:CDS | 35.0% | |
| CTCTCAAATGAACTCTTCAA+TGG | + | chr6.1:71597950-71597969 | MS.gene58912:CDS | 35.0% | |
| GAAGAACATCCAAATTGACT+AGG | - | chr6.1:71599392-71599411 | None:intergenic | 35.0% | |
| GAAGGGATTGTTAATGTTGT+TGG | - | chr6.1:71597890-71597909 | None:intergenic | 35.0% | |
| GCATGTAGTTCATCAAAACA+TGG | + | chr6.1:71597983-71598002 | MS.gene58912:CDS | 35.0% | |
| GTACTTACCATATACTCCTT+TGG | + | chr6.1:71598602-71598621 | MS.gene58912:intron | 35.0% | |
| TCAGATGAATCAACAGCTAA+AGG | - | chr6.1:71600091-71600110 | None:intergenic | 35.0% | |
| TCATGCACTCTAAATAGTGA+TGG | + | chr6.1:71600061-71600080 | MS.gene58912:CDS | 35.0% | |
| TGCTTGAGTAGGAAGAAAAA+TGG | + | chr6.1:71598358-71598377 | MS.gene58912:CDS | 35.0% | |
| TGTTGGGAAAATGGGATTAA+GGG | - | chr6.1:71597873-71597892 | None:intergenic | 35.0% | |
| TTGTTGGGAAAATGGGATTA+AGG | - | chr6.1:71597874-71597893 | None:intergenic | 35.0% | |
| ! | AAGAAAGAGACAAAGTTGGT+TGG | - | chr6.1:71600144-71600163 | None:intergenic | 35.0% |
| ! | ACACATTTTTCTGAGTCATC+TGG | - | chr6.1:71598154-71598173 | None:intergenic | 35.0% |
| ! | AGCTTGTTTGTGAGAGTTTA+TGG | + | chr6.1:71598764-71598783 | MS.gene58912:intron | 35.0% |
| ! | CTATTTAGAGTGCATGATTG+TGG | - | chr6.1:71600058-71600077 | None:intergenic | 35.0% |
| ! | GATCTGGTGTATTGTTATTG+TGG | + | chr6.1:71598238-71598257 | MS.gene58912:CDS | 35.0% |
| AAGCTATGCTAGAGACCTTA+TGG | - | chr6.1:71598832-71598851 | None:intergenic | 40.0% | |
| AAGGGAAGAAGAGAATGTAG+AGG | - | chr6.1:71597811-71597830 | None:intergenic | 40.0% | |
| ACCAGATCACAACTCTCATT+TGG | - | chr6.1:71598226-71598245 | None:intergenic | 40.0% | |
| AGGATCATGAGATATGGAAG+TGG | - | chr6.1:71597785-71597804 | None:intergenic | 40.0% | |
| CACATGCAATGTCACTATCT+TGG | + | chr6.1:71599118-71599137 | MS.gene58912:intron | 40.0% | |
| GACTCAGAAAAATGTGTGGA+TGG | + | chr6.1:71598157-71598176 | MS.gene58912:CDS | 40.0% | |
| GATGAAGATTGGACTCTGTT+TGG | + | chr6.1:71598547-71598566 | MS.gene58912:intron | 40.0% | |
| GTAGCTCGATAATATGGGTT+AGG | - | chr6.1:71599631-71599650 | None:intergenic | 40.0% | |
| TATAACCATGCTGCAAGAAC+AGG | - | chr6.1:71598043-71598062 | None:intergenic | 40.0% | |
| TGGAGAAGAATTGCTTGAGT+AGG | + | chr6.1:71598347-71598366 | MS.gene58912:CDS | 40.0% | |
| TTCCGGAGTAAGTGTTTCAT+GGG | + | chr6.1:71598701-71598720 | MS.gene58912:intron | 40.0% | |
| TTTCCGGAGTAAGTGTTTCA+TGG | + | chr6.1:71598700-71598719 | MS.gene58912:intron | 40.0% | |
| ! | AATGGATTTCAAGGTCTTGG+AGG | + | chr6.1:71598382-71598401 | MS.gene58912:CDS | 40.0% |
| ! | AGACAAAGTTGGTTGGAGTT+TGG | - | chr6.1:71600137-71600156 | None:intergenic | 40.0% |
| ! | ATGTGTGGATGGTTTGGAAA+AGG | + | chr6.1:71598168-71598187 | MS.gene58912:CDS | 40.0% |
| ! | GAAGGTGTAGCTCGATAATA+TGG | - | chr6.1:71599637-71599656 | None:intergenic | 40.0% |
| !! | AGATGGAAGTGTTAGAAGGT+TGG | + | chr6.1:71598327-71598346 | MS.gene58912:CDS | 40.0% |
| !! | AGGGTTGATGATGTTGAGTT+TGG | - | chr6.1:71597854-71597873 | None:intergenic | 40.0% |
| !! | GAAAAGGCTTTGAAAGTGAG+AGG | + | chr6.1:71598184-71598203 | MS.gene58912:CDS | 40.0% |
| !! | GGTAATGGATTTCAAGGTCT+TGG | + | chr6.1:71598379-71598398 | MS.gene58912:CDS | 40.0% |
| !! | GGTTAATTTGTTAGAGCGAG+AGG | + | chr6.1:71599547-71599566 | MS.gene58912:intron | 40.0% |
| !! | TTGGAGATGGAAGTGTTAGA+AGG | + | chr6.1:71598323-71598342 | MS.gene58912:CDS | 40.0% |
| AGCCCATGAAACACTTACTC+CGG | - | chr6.1:71598706-71598725 | None:intergenic | 45.0% | |
| CATGGCTTCTGTCGAAGAAT+CGG | + | chr6.1:71599966-71599985 | MS.gene58912:CDS | 45.0% | |
| CTGCAAGAACAGGACAACAT+CGG | - | chr6.1:71598033-71598052 | None:intergenic | 45.0% | |
| GAGTGAGACTCATGTAGGAA+GGG | - | chr6.1:71597829-71597848 | None:intergenic | 45.0% | |
| GCCAAATGAGAGTTGTGATC+TGG | + | chr6.1:71598222-71598241 | MS.gene58912:CDS | 45.0% | |
| GTGACAAAATGTGTGTCCGA+AGG | - | chr6.1:71599655-71599674 | None:intergenic | 45.0% | |
| TCGGACGGCTTATATTCACA+TGG | + | chr6.1:71599985-71600004 | MS.gene58912:CDS | 45.0% | |
| TCTGAGTCATCTGGTACCAA+AGG | - | chr6.1:71598145-71598164 | None:intergenic | 45.0% | |
| TGAGTGAGACTCATGTAGGA+AGG | - | chr6.1:71597830-71597849 | None:intergenic | 45.0% | |
| TGGATGAGTGAGACTCATGT+AGG | - | chr6.1:71597834-71597853 | None:intergenic | 45.0% | |
| ! | ACGACGACGATGATGATGAA+TGG | - | chr6.1:71598096-71598115 | None:intergenic | 45.0% |
| !! | AGTGGAGAACTTGTTGGAGA+TGG | + | chr6.1:71598310-71598329 | MS.gene58912:CDS | 45.0% |
| !! | GCTTTGCTGTTGAACAAAGG+TGG | + | chr6.1:71600025-71600044 | MS.gene58912:CDS | 45.0% |
| !! | TGAATGGTTTTCAAGGGCAG+TGG | - | chr6.1:71598080-71598099 | None:intergenic | 45.0% |
| GCTTCTGTCGAAGAATCGGA+CGG | + | chr6.1:71599970-71599989 | MS.gene58912:CDS | 50.0% | |
| GTTGTCCTGTTCTTGCAGCA+TGG | + | chr6.1:71598035-71598054 | MS.gene58912:CDS | 50.0% | |
| ! | GAACAGGACAACATCGGCTA+CGG | - | chr6.1:71598027-71598046 | None:intergenic | 50.0% |
| !! | ATGGTTTTCAAGGGCAGTGG+AGG | - | chr6.1:71598077-71598096 | None:intergenic | 50.0% |
| !! | CGCGCTTTGCTGTTGAACAA+AGG | + | chr6.1:71600022-71600041 | MS.gene58912:CDS | 50.0% |
| !! | GTGAGCTAATGGGCTTGACA+TGG | + | chr6.1:71599948-71599967 | MS.gene58912:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 71597767 | 71600219 | 71597767 | ID=MS.gene58912 |
| chr6.1 | mRNA | 71597767 | 71600219 | 71597767 | ID=MS.gene58912.t1;Parent=MS.gene58912 |
| chr6.1 | exon | 71597767 | 71598435 | 71597767 | ID=MS.gene58912.t1.exon1;Parent=MS.gene58912.t1 |
| chr6.1 | CDS | 71597767 | 71598435 | 71597767 | ID=cds.MS.gene58912.t1;Parent=MS.gene58912.t1 |
| chr6.1 | exon | 71599881 | 71600219 | 71599881 | ID=MS.gene58912.t1.exon2;Parent=MS.gene58912.t1 |
| chr6.1 | CDS | 71599881 | 71600219 | 71599881 | ID=cds.MS.gene58912.t1;Parent=MS.gene58912.t1 |
| Gene Sequence |
| Protein sequence |