Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58952.t1 | RHN64213.1 | 99.6 | 230 | 1 | 0 | 1 | 230 | 1153 | 1382 | 1.80E-126 | 461.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58952.t1 | F4IHS2 | 87.4 | 230 | 29 | 0 | 1 | 230 | 918 | 1147 | 1.1e-113 | 410.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58952.t1 | G7JJ22 | 99.6 | 230 | 1 | 0 | 1 | 230 | 1169 | 1398 | 1.3e-126 | 461.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene58952.t1 | TR | SNF2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053486 | MS.gene58952 | 0.811599 | 6.46E-51 | -1.69E-46 |
| MS.gene060347 | MS.gene58952 | 0.829394 | 5.28E-55 | -1.69E-46 |
| MS.gene060349 | MS.gene58952 | 0.921434 | 3.60E-88 | -1.69E-46 |
| MS.gene060350 | MS.gene58952 | 0.964555 | 1.79E-123 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58952.t1 | MTR_4g118720 | 99.565 | 230 | 1 | 0 | 1 | 230 | 1169 | 1398 | 5.00e-157 | 482 |
| MS.gene58952.t1 | MTR_1g105050 | 51.709 | 234 | 97 | 5 | 1 | 230 | 539 | 760 | 4.14e-70 | 232 |
| MS.gene58952.t1 | MTR_5g005840 | 50.427 | 234 | 99 | 5 | 1 | 230 | 526 | 746 | 4.17e-69 | 229 |
| MS.gene58952.t1 | MTR_4g118845 | 44.828 | 232 | 108 | 5 | 1 | 230 | 163 | 376 | 2.96e-54 | 186 |
| MS.gene58952.t1 | MTR_4g118845 | 44.828 | 232 | 108 | 5 | 1 | 230 | 350 | 563 | 3.63e-54 | 187 |
| MS.gene58952.t1 | MTR_2g020000 | 46.121 | 232 | 105 | 6 | 1 | 230 | 353 | 566 | 5.69e-48 | 169 |
| MS.gene58952.t1 | MTR_8g030550 | 41.935 | 248 | 118 | 5 | 1 | 230 | 1148 | 1387 | 4.29e-45 | 161 |
| MS.gene58952.t1 | MTR_8g030550 | 41.270 | 252 | 114 | 5 | 1 | 230 | 1148 | 1387 | 4.39e-45 | 161 |
| MS.gene58952.t1 | MTR_8g030550 | 41.270 | 252 | 114 | 5 | 1 | 230 | 1148 | 1387 | 4.87e-45 | 160 |
| MS.gene58952.t1 | MTR_7g078090 | 40.637 | 251 | 117 | 5 | 1 | 230 | 1156 | 1395 | 9.95e-45 | 160 |
| MS.gene58952.t1 | MTR_5g020000 | 39.004 | 241 | 127 | 6 | 1 | 230 | 349 | 580 | 2.15e-43 | 155 |
| MS.gene58952.t1 | MTR_5g090090 | 38.589 | 241 | 118 | 5 | 1 | 230 | 786 | 1007 | 7.11e-36 | 134 |
| MS.gene58952.t1 | MTR_5g090090 | 38.589 | 241 | 118 | 5 | 1 | 230 | 786 | 1007 | 8.42e-36 | 134 |
| MS.gene58952.t1 | MTR_1g013190 | 37.607 | 234 | 122 | 6 | 1 | 230 | 469 | 682 | 5.63e-35 | 132 |
| MS.gene58952.t1 | MTR_3g106210 | 36.910 | 233 | 125 | 4 | 1 | 230 | 471 | 684 | 9.77e-35 | 131 |
| MS.gene58952.t1 | MTR_3g106210 | 36.910 | 233 | 125 | 4 | 1 | 230 | 471 | 684 | 9.95e-35 | 131 |
| MS.gene58952.t1 | MTR_3g106210 | 36.910 | 233 | 125 | 4 | 1 | 230 | 471 | 684 | 1.01e-34 | 131 |
| MS.gene58952.t1 | MTR_3g106210 | 36.910 | 233 | 125 | 4 | 1 | 230 | 471 | 684 | 1.16e-34 | 131 |
| MS.gene58952.t1 | MTR_3g053910 | 37.860 | 243 | 117 | 7 | 1 | 230 | 769 | 990 | 2.14e-34 | 130 |
| MS.gene58952.t1 | MTR_3g053910 | 37.860 | 243 | 117 | 7 | 1 | 230 | 740 | 961 | 2.22e-34 | 130 |
| MS.gene58952.t1 | MTR_4g096930 | 36.287 | 237 | 124 | 7 | 1 | 230 | 908 | 1124 | 3.01e-27 | 109 |
| MS.gene58952.t1 | MTR_7g045505 | 35.217 | 230 | 125 | 8 | 1 | 219 | 163 | 379 | 5.94e-25 | 103 |
| MS.gene58952.t1 | MTR_7g045505 | 35.217 | 230 | 125 | 8 | 1 | 219 | 163 | 379 | 6.24e-25 | 102 |
| MS.gene58952.t1 | MTR_7g090960 | 34.356 | 163 | 87 | 4 | 1 | 150 | 665 | 820 | 1.44e-23 | 99.0 |
| MS.gene58952.t1 | MTR_7g090960 | 44.737 | 76 | 41 | 1 | 155 | 230 | 1110 | 1184 | 9.78e-14 | 70.5 |
| MS.gene58952.t1 | MTR_7g090960 | 34.356 | 163 | 87 | 4 | 1 | 150 | 746 | 901 | 1.56e-23 | 99.0 |
| MS.gene58952.t1 | MTR_7g090960 | 44.737 | 76 | 41 | 1 | 155 | 230 | 1191 | 1265 | 9.30e-14 | 70.5 |
| MS.gene58952.t1 | MTR_1g069755 | 31.780 | 236 | 141 | 8 | 1 | 230 | 587 | 808 | 1.82e-23 | 99.0 |
| MS.gene58952.t1 | MTR_1g053955 | 39.416 | 137 | 67 | 3 | 1 | 131 | 683 | 809 | 4.14e-22 | 94.7 |
| MS.gene58952.t1 | MTR_1g053955 | 43.421 | 76 | 42 | 1 | 155 | 230 | 1061 | 1135 | 8.57e-13 | 67.8 |
| MS.gene58952.t1 | MTR_8g010750 | 84.314 | 51 | 8 | 0 | 10 | 60 | 416 | 466 | 3.04e-20 | 89.0 |
| MS.gene58952.t1 | MTR_7g039320 | 29.224 | 219 | 106 | 6 | 1 | 219 | 212 | 381 | 3.09e-17 | 80.5 |
| MS.gene58952.t1 | MTR_7g039320 | 29.224 | 219 | 106 | 6 | 1 | 219 | 212 | 381 | 3.16e-17 | 80.5 |
| MS.gene58952.t1 | MTR_8g094070 | 27.206 | 272 | 140 | 10 | 1 | 228 | 557 | 814 | 1.19e-16 | 79.0 |
| MS.gene58952.t1 | MTR_8g094070 | 27.206 | 272 | 140 | 10 | 1 | 228 | 557 | 814 | 1.40e-16 | 78.6 |
| MS.gene58952.t1 | MTR_4g035100 | 26.592 | 267 | 143 | 8 | 1 | 219 | 1617 | 1878 | 2.18e-16 | 78.2 |
| MS.gene58952.t1 | MTR_4g035100 | 26.592 | 267 | 143 | 8 | 1 | 219 | 1617 | 1878 | 2.20e-16 | 78.2 |
| MS.gene58952.t1 | MTR_4g077600 | 38.614 | 101 | 53 | 3 | 114 | 211 | 47 | 141 | 1.10e-15 | 72.4 |
| MS.gene58952.t1 | MTR_4g077600 | 34.286 | 140 | 77 | 5 | 82 | 215 | 56 | 186 | 1.14e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58952.t1 | AT2G28290 | 87.391 | 230 | 29 | 0 | 1 | 230 | 918 | 1147 | 1.34e-130 | 406 |
| MS.gene58952.t1 | AT2G28290 | 87.391 | 230 | 29 | 0 | 1 | 230 | 918 | 1147 | 1.34e-130 | 406 |
| MS.gene58952.t1 | AT2G28290 | 87.391 | 230 | 29 | 0 | 1 | 230 | 918 | 1147 | 1.34e-130 | 406 |
| MS.gene58952.t1 | AT2G28290 | 87.391 | 230 | 29 | 0 | 1 | 230 | 919 | 1148 | 1.34e-130 | 406 |
| MS.gene58952.t1 | AT2G28290 | 87.391 | 230 | 29 | 0 | 1 | 230 | 918 | 1147 | 1.34e-130 | 406 |
| MS.gene58952.t1 | AT2G28290 | 87.391 | 230 | 29 | 0 | 1 | 230 | 919 | 1148 | 1.34e-130 | 406 |
| MS.gene58952.t1 | AT5G19310 | 51.709 | 234 | 97 | 5 | 1 | 230 | 284 | 505 | 5.45e-72 | 234 |
| MS.gene58952.t1 | AT3G06010 | 50.000 | 238 | 95 | 5 | 1 | 230 | 566 | 787 | 2.88e-71 | 235 |
| MS.gene58952.t1 | AT5G19310 | 51.709 | 234 | 97 | 5 | 1 | 230 | 548 | 769 | 1.17e-70 | 233 |
| MS.gene58952.t1 | AT5G18620 | 44.397 | 232 | 109 | 6 | 1 | 230 | 356 | 569 | 9.45e-47 | 166 |
| MS.gene58952.t1 | AT3G06400 | 45.690 | 232 | 106 | 6 | 1 | 230 | 351 | 564 | 1.01e-46 | 166 |
| MS.gene58952.t1 | AT3G06400 | 45.690 | 232 | 106 | 6 | 1 | 230 | 351 | 564 | 1.07e-46 | 165 |
| MS.gene58952.t1 | AT3G06400 | 45.690 | 232 | 106 | 6 | 1 | 230 | 351 | 564 | 1.10e-46 | 165 |
| MS.gene58952.t1 | AT5G18620 | 44.397 | 232 | 109 | 6 | 1 | 230 | 356 | 569 | 1.25e-46 | 165 |
| MS.gene58952.t1 | AT2G46020 | 41.434 | 251 | 115 | 5 | 1 | 230 | 1143 | 1382 | 4.09e-45 | 161 |
| MS.gene58952.t1 | AT2G46020 | 41.434 | 251 | 115 | 5 | 1 | 230 | 1143 | 1382 | 4.09e-45 | 161 |
| MS.gene58952.t1 | AT2G46020 | 41.434 | 251 | 115 | 5 | 1 | 230 | 1143 | 1382 | 4.09e-45 | 161 |
| MS.gene58952.t1 | AT2G46020 | 41.434 | 251 | 115 | 5 | 1 | 230 | 1142 | 1381 | 4.59e-45 | 161 |
| MS.gene58952.t1 | AT2G46020 | 41.434 | 251 | 115 | 5 | 1 | 230 | 1142 | 1381 | 4.59e-45 | 161 |
| MS.gene58952.t1 | AT2G46020 | 41.434 | 251 | 115 | 5 | 1 | 230 | 1142 | 1381 | 4.59e-45 | 161 |
| MS.gene58952.t1 | AT2G25170 | 35.622 | 233 | 128 | 4 | 1 | 230 | 473 | 686 | 1.28e-35 | 134 |
| MS.gene58952.t1 | AT2G25170 | 35.622 | 233 | 128 | 4 | 1 | 230 | 456 | 669 | 1.31e-35 | 134 |
| MS.gene58952.t1 | AT2G25170 | 35.622 | 233 | 128 | 4 | 1 | 230 | 456 | 669 | 1.31e-35 | 134 |
| MS.gene58952.t1 | AT2G25170 | 35.622 | 233 | 128 | 4 | 1 | 230 | 482 | 695 | 1.37e-35 | 134 |
| MS.gene58952.t1 | AT5G66750 | 38.333 | 240 | 130 | 6 | 1 | 230 | 367 | 598 | 1.38e-35 | 133 |
| MS.gene58952.t1 | AT2G13370 | 38.589 | 241 | 116 | 6 | 1 | 230 | 794 | 1013 | 1.96e-35 | 133 |
| MS.gene58952.t1 | AT2G13370 | 38.589 | 241 | 116 | 6 | 1 | 230 | 794 | 1013 | 1.96e-35 | 133 |
| MS.gene58952.t1 | AT2G13370 | 38.589 | 241 | 116 | 6 | 1 | 230 | 794 | 1013 | 1.96e-35 | 133 |
| MS.gene58952.t1 | AT4G31900 | 35.776 | 232 | 124 | 5 | 1 | 230 | 349 | 557 | 2.27e-32 | 124 |
| MS.gene58952.t1 | AT4G31900 | 35.776 | 232 | 124 | 5 | 1 | 230 | 390 | 598 | 2.51e-32 | 124 |
| MS.gene58952.t1 | AT4G31900 | 35.776 | 232 | 124 | 5 | 1 | 230 | 390 | 598 | 2.56e-32 | 124 |
| MS.gene58952.t1 | AT2G44980 | 32.083 | 240 | 138 | 7 | 1 | 230 | 218 | 442 | 1.47e-23 | 99.0 |
| MS.gene58952.t1 | AT3G12810 | 40.146 | 137 | 66 | 3 | 1 | 131 | 698 | 824 | 1.84e-22 | 95.9 |
| MS.gene58952.t1 | AT3G12810 | 43.421 | 76 | 42 | 1 | 155 | 230 | 1074 | 1148 | 1.86e-11 | 63.9 |
| MS.gene58952.t1 | AT3G12810 | 40.146 | 137 | 66 | 3 | 1 | 131 | 694 | 820 | 1.89e-22 | 95.9 |
| MS.gene58952.t1 | AT3G12810 | 43.421 | 76 | 42 | 1 | 155 | 230 | 1070 | 1144 | 1.91e-11 | 63.9 |
| MS.gene58952.t1 | AT2G18760 | 30.213 | 235 | 146 | 7 | 1 | 230 | 638 | 859 | 2.10e-22 | 95.9 |
| MS.gene58952.t1 | AT2G18760 | 30.213 | 235 | 146 | 7 | 1 | 230 | 579 | 800 | 2.60e-22 | 95.5 |
| MS.gene58952.t1 | AT2G18760 | 30.213 | 235 | 146 | 7 | 1 | 230 | 579 | 800 | 2.60e-22 | 95.5 |
| MS.gene58952.t1 | AT2G18760 | 30.213 | 235 | 146 | 7 | 1 | 230 | 579 | 800 | 2.60e-22 | 95.5 |
| MS.gene58952.t1 | AT2G18760 | 30.213 | 235 | 146 | 7 | 1 | 230 | 579 | 800 | 2.60e-22 | 95.5 |
| MS.gene58952.t1 | AT2G18760 | 30.213 | 235 | 146 | 7 | 1 | 230 | 579 | 800 | 2.60e-22 | 95.5 |
| MS.gene58952.t1 | AT2G18760 | 30.213 | 235 | 146 | 7 | 1 | 230 | 579 | 800 | 2.60e-22 | 95.5 |
| MS.gene58952.t1 | AT5G44800 | 34.599 | 237 | 128 | 7 | 1 | 230 | 863 | 1079 | 4.08e-22 | 95.1 |
| MS.gene58952.t1 | AT3G57300 | 34.752 | 141 | 75 | 3 | 1 | 131 | 754 | 887 | 5.74e-22 | 94.4 |
| MS.gene58952.t1 | AT3G57300 | 34.752 | 141 | 75 | 3 | 1 | 131 | 787 | 920 | 6.00e-22 | 94.4 |
| MS.gene58952.t1 | AT3G57300 | 43.421 | 76 | 42 | 1 | 155 | 230 | 1238 | 1312 | 2.39e-13 | 69.3 |
| MS.gene58952.t1 | AT3G57300 | 34.752 | 141 | 75 | 3 | 1 | 131 | 754 | 887 | 6.34e-22 | 94.4 |
| MS.gene58952.t1 | AT3G57300 | 43.421 | 76 | 42 | 1 | 155 | 230 | 1205 | 1279 | 2.50e-13 | 69.3 |
| MS.gene58952.t1 | AT3G57300 | 34.752 | 141 | 75 | 3 | 1 | 131 | 754 | 887 | 6.34e-22 | 94.4 |
| MS.gene58952.t1 | AT3G57300 | 43.421 | 76 | 42 | 1 | 155 | 230 | 1205 | 1279 | 2.50e-13 | 69.3 |
| MS.gene58952.t1 | AT2G44980 | 32.314 | 229 | 133 | 7 | 1 | 219 | 223 | 439 | 7.37e-22 | 94.0 |
| MS.gene58952.t1 | AT2G44980 | 32.314 | 229 | 133 | 7 | 1 | 219 | 224 | 440 | 7.80e-22 | 94.0 |
| MS.gene58952.t1 | AT2G02090 | 28.866 | 291 | 127 | 8 | 1 | 229 | 389 | 661 | 5.39e-21 | 91.7 |
Find 52 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATCTGTTGCCTTCAATTT+AGG | 0.199353 | 8.4:-12790311 | None:intergenic |
| CTGAGTAAGAAAATAAAATA+TGG | 0.241222 | 8.4:-12790727 | None:intergenic |
| GGGAATCAGGTTTGTTAAAT+AGG | 0.275446 | 8.4:-12790705 | None:intergenic |
| TTCAACGATGACTAGGCTTC+TGG | 0.299032 | 8.4:+12790591 | MS.gene58952:CDS |
| TTCCCACAAAGTCTAATAAT+TGG | 0.302423 | 8.4:-12790263 | None:intergenic |
| AAAATAAAATATGGGGAATC+AGG | 0.331015 | 8.4:-12790718 | None:intergenic |
| GACTAGGCTTCTGGATGTTA+TGG | 0.361626 | 8.4:+12790600 | MS.gene58952:CDS |
| CCACCAATTATTAGACTTTG+TGG | 0.371297 | 8.4:+12790260 | MS.gene58952:CDS |
| GAAGATAATCTTGGTGCTAT+TGG | 0.389929 | 8.4:+12788719 | MS.gene58952:CDS |
| TGAGTAAGAAAATAAAATAT+GGG | 0.403065 | 8.4:-12790726 | None:intergenic |
| TTGTGGGAAGCTTGAGATGC+TGG | 0.413428 | 8.4:+12790277 | MS.gene58952:CDS |
| AATAAGCCATTTGAGAGTAC+TGG | 0.421189 | 8.4:+12787711 | MS.gene58952:CDS |
| GAGTGAAGCTGGCTGAGATA+TGG | 0.433609 | 8.4:-12789152 | None:intergenic |
| TATCGGTACCTCCGGTTGGA+TGG | 0.443271 | 8.4:+12790646 | MS.gene58952:CDS |
| TCAGATGAATTGAATATGTT+AGG | 0.446716 | 8.4:-12787669 | None:intergenic |
| CGGTTGGATGGGCATACATC+AGG | 0.462017 | 8.4:+12790658 | MS.gene58952:CDS |
| AGAACAACCTTGAAGAACTC+TGG | 0.464831 | 8.4:+12787625 | None:intergenic |
| GGTCCATAACTTACTTCATC+GGG | 0.467580 | 8.4:-12787744 | None:intergenic |
| CACCAATTATTAGACTTTGT+GGG | 0.469881 | 8.4:+12790261 | MS.gene58952:CDS |
| TTATCTCCAGTACTCTCAAA+TGG | 0.497413 | 8.4:-12787717 | None:intergenic |
| GTAGTGCCCAGAGTTCTTCA+AGG | 0.497845 | 8.4:-12787632 | None:intergenic |
| AAGAGAGTGGAAGATAATCT+TGG | 0.502358 | 8.4:+12788710 | MS.gene58952:CDS |
| GTACAAATGGTCTCAAAACT+TGG | 0.503024 | 8.4:-12787909 | None:intergenic |
| CTGATGTATGCCCATCCAAC+CGG | 0.507554 | 8.4:-12790657 | None:intergenic |
| ATCGGTACCTCCGGTTGGAT+GGG | 0.515675 | 8.4:+12790647 | MS.gene58952:CDS |
| ATACCTCCTCTGAGTGAAGC+TGG | 0.516305 | 8.4:-12789163 | None:intergenic |
| TTAAGCCTCCGAAGTACAAA+TGG | 0.527849 | 8.4:-12787922 | None:intergenic |
| TAACTAGGCTTTACTGTCTG+AGG | 0.531178 | 8.4:+12787855 | MS.gene58952:intron |
| TGGTGCTATTGGCACTTCAA+AGG | 0.533753 | 8.4:+12788730 | MS.gene58952:CDS |
| AATTGAAGGCAACAGATCAC+CGG | 0.537031 | 8.4:+12790315 | MS.gene58952:CDS |
| TGGTCCATAACTTACTTCAT+CGG | 0.540847 | 8.4:-12787745 | None:intergenic |
| CCACAAAGTCTAATAATTGG+TGG | 0.541494 | 8.4:-12790260 | None:intergenic |
| GAACAACCTTGAAGAACTCT+GGG | 0.544637 | 8.4:+12787626 | None:intergenic |
| CAAAACAGTATCGGTACCTC+CGG | 0.544822 | 8.4:+12790638 | MS.gene58952:CDS |
| ATTGGTGGCAGATAATGCTT+AGG | 0.546210 | 8.4:-12790245 | None:intergenic |
| GTCAGTGCACAACTCTGTCA+TGG | 0.547166 | 8.4:+12789106 | MS.gene58952:CDS |
| ACAGTATCGGTACCTCCGGT+TGG | 0.566904 | 8.4:+12790642 | MS.gene58952:CDS |
| TGAGACCATTTGTACTTCGG+AGG | 0.576819 | 8.4:+12787917 | MS.gene58952:CDS |
| CCTTCAATTTAGGTAAAACA+CGG | 0.578291 | 8.4:-12790301 | None:intergenic |
| ACTTAACTTCAAAACAGTAT+CGG | 0.588455 | 8.4:+12790629 | MS.gene58952:CDS |
| ATAAGTCTCTCAATCTTCGA+AGG | 0.602056 | 8.4:-12788650 | None:intergenic |
| TGAGAGACTTATAAGATGTG+AGG | 0.619035 | 8.4:+12788661 | MS.gene58952:CDS |
| TAACATATTCAATTCATCTG+AGG | 0.623873 | 8.4:+12787671 | MS.gene58952:CDS |
| GAGTAAGAAAATAAAATATG+GGG | 0.631151 | 8.4:-12790725 | None:intergenic |
| TCTCAGCCAGCTTCACTCAG+AGG | 0.638451 | 8.4:+12789157 | MS.gene58952:CDS |
| ATTGAAGGCAACAGATCACC+GGG | 0.638971 | 8.4:+12790316 | MS.gene58952:CDS |
| CATACATCAGGAGGTGATCG+TGG | 0.646200 | 8.4:+12790670 | MS.gene58952:CDS |
| ACTTCGGAGGCTTAAACACA+AGG | 0.649914 | 8.4:+12787930 | MS.gene58952:CDS |
| CAGCCAGCTTCACTCAGAGG+AGG | 0.657729 | 8.4:+12789160 | MS.gene58952:CDS |
| CTAGGCTTTACTGTCTGAGG+AGG | 0.660304 | 8.4:+12787858 | MS.gene58952:intron |
| TTGGATGGGCATACATCAGG+AGG | 0.660334 | 8.4:+12790661 | MS.gene58952:CDS |
| ATGTATGCCCATCCAACCGG+AGG | 0.684533 | 8.4:-12790654 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAATACAAAATCA+AGG | - | chr8.4:12787820-12787839 | None:intergenic | 10.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr8.4:12790034-12790053 | None:intergenic | 15.0% |
| !! | AAGAATAATGAATGTATAAA+TGG | - | chr8.4:12788183-12788202 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr8.4:12790033-12790052 | MS.gene58952:intron | 15.0% |
| !! | ATTTACAAACCAAAAAAAAA+AGG | - | chr8.4:12789776-12789795 | None:intergenic | 15.0% |
| !! | TGAAAATATGATATTGAAAT+CGG | + | chr8.4:12788509-12788528 | MS.gene58952:intron | 15.0% |
| !! | TGAGTAAGAAAATAAAATAT+GGG | - | chr8.4:12790729-12790748 | None:intergenic | 15.0% |
| !! | TTAAAAAATAAAGCAATGTA+TGG | + | chr8.4:12789531-12789550 | MS.gene58952:intron | 15.0% |
| !!! | CTTTTACTAGTAAATTTTTT+GGG | - | chr8.4:12788257-12788276 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr8.4:12790010-12790029 | None:intergenic | 15.0% |
| !!! | TCTTTTACTAGTAAATTTTT+TGG | - | chr8.4:12788258-12788277 | None:intergenic | 15.0% |
| !!! | TTCAAGATCATTTTATAAAT+TGG | + | chr8.4:12789357-12789376 | MS.gene58952:intron | 15.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr8.4:12790024-12790043 | MS.gene58952:intron | 20.0% |
| !! | AATCATCAATAAGTACATTA+GGG | - | chr8.4:12789219-12789238 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr8.4:12789947-12789966 | None:intergenic | 20.0% |
| !! | CCTATAATATAAGAAAACAT+TGG | - | chr8.4:12788616-12788635 | None:intergenic | 20.0% |
| !! | CTAAAAAATAAAGCAATGTA+TGG | + | chr8.4:12789404-12789423 | MS.gene58952:intron | 20.0% |
| !! | CTGAGTAAGAAAATAAAATA+TGG | - | chr8.4:12790730-12790749 | None:intergenic | 20.0% |
| !! | GAGTAAGAAAATAAAATATG+GGG | - | chr8.4:12790728-12790747 | None:intergenic | 20.0% |
| !! | TGAGATTTAAATTACATCTT+GGG | + | chr8.4:12789282-12789301 | MS.gene58952:intron | 20.0% |
| !! | TTGAGATTTAAATTACATCT+TGG | + | chr8.4:12789281-12789300 | MS.gene58952:intron | 20.0% |
| !!! | ATTTCTCTTCCTTTTTTTTT+TGG | + | chr8.4:12789764-12789783 | MS.gene58952:intron | 20.0% |
| !!! | CATACATTGCTTTATTTTTT+AGG | - | chr8.4:12789406-12789425 | None:intergenic | 20.0% |
| !!! | CCAATGTTTTCTTATATTAT+AGG | + | chr8.4:12788613-12788632 | MS.gene58952:intron | 20.0% |
| !!! | GATTGTTGTTTTTCAATTAA+AGG | + | chr8.4:12788960-12788979 | MS.gene58952:intron | 20.0% |
| !!! | GTGGAAAGATATTTTAATTA+GGG | - | chr8.4:12789037-12789056 | None:intergenic | 20.0% |
| !!! | TATTCTTTTAATTTTGCTTG+AGG | + | chr8.4:12788196-12788215 | MS.gene58952:intron | 20.0% |
| !!! | TCTTTTCTTTTTAATCAGAA+GGG | + | chr8.4:12788831-12788850 | MS.gene58952:intron | 20.0% |
| !!! | TGTGGAAAGATATTTTAATT+AGG | - | chr8.4:12789038-12789057 | None:intergenic | 20.0% |
| !!! | TGTGTAAGTTTTATATAGAT+GGG | - | chr8.4:12787773-12787792 | None:intergenic | 20.0% |
| !!! | TTCTTTTCTTTTTAATCAGA+AGG | + | chr8.4:12788830-12788849 | MS.gene58952:intron | 20.0% |
| !!! | TTGAATGGTTTTATATATGT+AGG | + | chr8.4:12788386-12788405 | MS.gene58952:intron | 20.0% |
| !!! | TTGTGTAAGTTTTATATAGA+TGG | - | chr8.4:12787774-12787793 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGGTTTGTAAATC+CGG | + | chr8.4:12789777-12789796 | MS.gene58952:intron | 20.0% |
| !!! | TTTTTTTTTTTTCCATTTGC+AGG | + | chr8.4:12790208-12790227 | MS.gene58952:intron | 20.0% |
| ! | AAAAGGAAGAGAAATAAACA+TGG | - | chr8.4:12789759-12789778 | None:intergenic | 25.0% |
| ! | AAAATAAAATATGGGGAATC+AGG | - | chr8.4:12790721-12790740 | None:intergenic | 25.0% |
| ! | AATTTATATTCCCAATTGTC+AGG | + | chr8.4:12789079-12789098 | MS.gene58952:intron | 25.0% |
| ! | ACTTAACTTCAAAACAGTAT+CGG | + | chr8.4:12790629-12790648 | MS.gene58952:CDS | 25.0% |
| ! | AGAAGCTAATAATATCAGTA+AGG | - | chr8.4:12788559-12788578 | None:intergenic | 25.0% |
| ! | ATAAACGTTAGTTCAATTTC+TGG | + | chr8.4:12788328-12788347 | MS.gene58952:intron | 25.0% |
| ! | ATAAATGGAAAAACATACAC+TGG | - | chr8.4:12788168-12788187 | None:intergenic | 25.0% |
| ! | ATCATTCAACAAAAAGCAAA+AGG | - | chr8.4:12788770-12788789 | None:intergenic | 25.0% |
| ! | CAATCATCAATAAGTACATT+AGG | - | chr8.4:12789220-12789239 | None:intergenic | 25.0% |
| ! | CAATGATTAAAGAAAGAGAA+TGG | - | chr8.4:12790067-12790086 | None:intergenic | 25.0% |
| ! | CACGAGTATACAAAAATTTA+AGG | - | chr8.4:12787993-12788012 | None:intergenic | 25.0% |
| ! | GTAATATAGAATTTGATGCA+TGG | + | chr8.4:12788352-12788371 | MS.gene58952:intron | 25.0% |
| ! | GTTACATTAGTAAATGTTAG+AGG | - | chr8.4:12788308-12788327 | None:intergenic | 25.0% |
| ! | GTTTGAAAAACATTCTGTTA+TGG | + | chr8.4:12789330-12789349 | MS.gene58952:intron | 25.0% |
| ! | TAAATGGAAAAACATACACT+GGG | - | chr8.4:12788167-12788186 | None:intergenic | 25.0% |
| ! | TAACATATTCAATTCATCTG+AGG | + | chr8.4:12787671-12787690 | MS.gene58952:CDS | 25.0% |
| ! | TCAGATGAATTGAATATGTT+AGG | - | chr8.4:12787672-12787691 | None:intergenic | 25.0% |
| !! | ATGGTATCTTTAAGTTTGAA+TGG | + | chr8.4:12788371-12788390 | MS.gene58952:intron | 25.0% |
| !! | TTAGGATATTTCTTTTTGTC+AGG | - | chr8.4:12789388-12789407 | None:intergenic | 25.0% |
| !!! | AAGTTTTATATAGATGGGAT+TGG | - | chr8.4:12787768-12787787 | None:intergenic | 25.0% |
| AATAAACATGGAATCTGAAG+TGG | - | chr8.4:12789747-12789766 | None:intergenic | 30.0% | |
| CACCAATTATTAGACTTTGT+GGG | + | chr8.4:12790261-12790280 | MS.gene58952:CDS | 30.0% | |
| CCTTCAATTTAGGTAAAACA+CGG | - | chr8.4:12790304-12790323 | None:intergenic | 30.0% | |
| GCATCTAATTTCTTTCACAT+TGG | + | chr8.4:12790372-12790391 | MS.gene58952:intron | 30.0% | |
| TAAGCTATTCACCAAACTAA+TGG | - | chr8.4:12789722-12789741 | None:intergenic | 30.0% | |
| TGCAAATATTGCTTTGATAC+CGG | - | chr8.4:12789799-12789818 | None:intergenic | 30.0% | |
| TTCCCACAAAGTCTAATAAT+TGG | - | chr8.4:12790266-12790285 | None:intergenic | 30.0% | |
| ! | AAAACTTTTGATGAAGAGAG+TGG | + | chr8.4:12788697-12788716 | MS.gene58952:CDS | 30.0% |
| ! | TTAGTGATTTGTGTGAGTAT+AGG | + | chr8.4:12789696-12789715 | MS.gene58952:intron | 30.0% |
| ! | TTTCAAGTCATTGTAAGTGA+TGG | - | chr8.4:12788494-12788513 | None:intergenic | 30.0% |
| ! | TTTTCTTTTCAACGATGACT+AGG | + | chr8.4:12790584-12790603 | MS.gene58952:CDS | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr8.4:12790115-12790134 | MS.gene58952:intron | 30.0% |
| !! | AAGTGACACTCATTTTGAAA+CGG | - | chr8.4:12789882-12789901 | None:intergenic | 30.0% |
| !! | GATATTTTGTAAACTTGCTC+TGG | + | chr8.4:12790427-12790446 | MS.gene58952:intron | 30.0% |
| !! | GTTGTTTTCTGTTTGTAACT+AGG | + | chr8.4:12787840-12787859 | MS.gene58952:intron | 30.0% |
| !! | TTCAAAATGAGTGTCACTTT+AGG | + | chr8.4:12789883-12789902 | MS.gene58952:intron | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr8.4:12790114-12790133 | None:intergenic | 30.0% |
| !!! | TTTTGAGACCATTTGTACTT+CGG | + | chr8.4:12787914-12787933 | MS.gene58952:CDS | 30.0% |
| AAATAAAGCAATGTATGGCG+AGG | + | chr8.4:12789409-12789428 | MS.gene58952:intron | 35.0% | |
| AAGAGAGTGGAAGATAATCT+TGG | + | chr8.4:12788710-12788729 | MS.gene58952:CDS | 35.0% | |
| ACTGCATTTCACTTAGAGAA+TGG | + | chr8.4:12789253-12789272 | MS.gene58952:intron | 35.0% | |
| AGCATATAGGATTTCATACC+CGG | - | chr8.4:12790337-12790356 | None:intergenic | 35.0% | |
| ATAAGTCTCTCAATCTTCGA+AGG | - | chr8.4:12788653-12788672 | None:intergenic | 35.0% | |
| ATAATATCAGTAAGGCAGAC+TGG | - | chr8.4:12788551-12788570 | None:intergenic | 35.0% | |
| ATGTATGGCGAGGTATAAAA+TGG | + | chr8.4:12789419-12789438 | MS.gene58952:intron | 35.0% | |
| CCACAAAGTCTAATAATTGG+TGG | - | chr8.4:12790263-12790282 | None:intergenic | 35.0% | |
| CCACCAATTATTAGACTTTG+TGG | + | chr8.4:12790260-12790279 | MS.gene58952:CDS | 35.0% | |
| GAAAAACATACACTGGGATA+AGG | - | chr8.4:12788161-12788180 | None:intergenic | 35.0% | |
| GTAACTTGACCATTTGATAG+TGG | + | chr8.4:12788790-12788809 | MS.gene58952:intron | 35.0% | |
| GTACAAATGGTCTCAAAACT+TGG | - | chr8.4:12787912-12787931 | None:intergenic | 35.0% | |
| GTGCAATATTGCACATGTTA+AGG | - | chr8.4:12789027-12789008 | None:intergenic | 35.0% | |
| TATAGTGATCTACCTGCAAA+TGG | - | chr8.4:12790223-12790242 | None:intergenic | 35.0% | |
| TGAGAGACTTATAAGATGTG+AGG | + | chr8.4:12788661-12788680 | MS.gene58952:CDS | 35.0% | |
| TGATCTGTTGCCTTCAATTT+AGG | - | chr8.4:12790314-12790333 | None:intergenic | 35.0% | |
| TGCATCAGATAGCTTAAACA+TGG | - | chr8.4:12788423-12788442 | None:intergenic | 35.0% | |
| TGGTCCATAACTTACTTCAT+CGG | - | chr8.4:12787748-12787767 | None:intergenic | 35.0% | |
| TTATCTCCAGTACTCTCAAA+TGG | - | chr8.4:12787720-12787739 | None:intergenic | 35.0% | |
| TTGGAAACACAAGAACAACA+AGG | - | chr8.4:12788597-12788616 | None:intergenic | 35.0% | |
| TTGGGTCATATATTAGTGCA+AGG | - | chr8.4:12789462-12789481 | None:intergenic | 35.0% | |
| ! | AATAAGCCATTTGAGAGTAC+TGG | + | chr8.4:12787711-12787730 | MS.gene58952:CDS | 35.0% |
| ! | CATACTGCTAATGCTTTTAC+AGG | + | chr8.4:12790558-12790577 | MS.gene58952:intron | 35.0% |
| ! | CCGTGTTTTACCTAAATTGA+AGG | + | chr8.4:12790301-12790320 | MS.gene58952:CDS | 35.0% |
| ! | GAAGAAGCGTATATAGGATA+TGG | - | chr8.4:12789191-12789210 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr8.4:12789985-12790004 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr8.4:12789981-12790000 | None:intergenic | 35.0% |
| !! | GAAGATAATCTTGGTGCTAT+TGG | + | chr8.4:12788719-12788738 | MS.gene58952:CDS | 35.0% |
| !! | GGGAATCAGGTTTGTTAAAT+AGG | - | chr8.4:12790708-12790727 | None:intergenic | 35.0% |
| !!! | AGTACTATTTTTGAAGGAGG+GGG | + | chr8.4:12790142-12790161 | MS.gene58952:intron | 35.0% |
| !!! | GAGTACTATTTTTGAAGGAG+GGG | + | chr8.4:12790141-12790160 | MS.gene58952:intron | 35.0% |
| !!! | GGAGTACTATTTTTGAAGGA+GGG | + | chr8.4:12790140-12790159 | MS.gene58952:intron | 35.0% |
| AAATCCTATATGCTTGTCGC+TGG | + | chr8.4:12790343-12790362 | MS.gene58952:intron | 40.0% | |
| AATTGAAGGCAACAGATCAC+CGG | + | chr8.4:12790315-12790334 | MS.gene58952:CDS | 40.0% | |
| ATATTCCCAATTGTCAGGCT+CGG | + | chr8.4:12789084-12789103 | MS.gene58952:intron | 40.0% | |
| ATCCTCAGTCCACTATCAAA+TGG | - | chr8.4:12788802-12788821 | None:intergenic | 40.0% | |
| CCACAAAAGTTGTTCATGTG+TGG | - | chr8.4:12789056-12789075 | None:intergenic | 40.0% | |
| GCACTAATATATGACCCAAC+CGG | + | chr8.4:12789463-12789482 | MS.gene58952:intron | 40.0% | |
| GGTCCATAACTTACTTCATC+GGG | - | chr8.4:12787747-12787766 | None:intergenic | 40.0% | |
| GTAAATGTTAGAGGCAACAC+AGG | - | chr8.4:12788299-12788318 | None:intergenic | 40.0% | |
| GTGAAGTCTAGGAACTAAAC+TGG | + | chr8.4:12790484-12790503 | MS.gene58952:intron | 40.0% | |
| GTGAGTATAGGCCATTAGTT+TGG | + | chr8.4:12789708-12789727 | MS.gene58952:intron | 40.0% | |
| TAACTAGGCTTTACTGTCTG+AGG | + | chr8.4:12787855-12787874 | MS.gene58952:intron | 40.0% | |
| TAATCCAGCGACAAGCATAT+AGG | - | chr8.4:12790350-12790369 | None:intergenic | 40.0% | |
| TAGTTCCTAGACTTCACAGA+GGG | - | chr8.4:12790481-12790500 | None:intergenic | 40.0% | |
| TATTTGACTACTGCAGCAAG+AGG | + | chr8.4:12789821-12789840 | MS.gene58952:intron | 40.0% | |
| TCACCCGATGAAGTAAGTTA+TGG | + | chr8.4:12787741-12787760 | MS.gene58952:intron | 40.0% | |
| TGTGACATCATGTCACAACA+GGG | + | chr8.4:12789498-12789517 | MS.gene58952:intron | 40.0% | |
| TTAAGCCTCCGAAGTACAAA+TGG | - | chr8.4:12787925-12787944 | None:intergenic | 40.0% | |
| TTAGTTCCTAGACTTCACAG+AGG | - | chr8.4:12790482-12790501 | None:intergenic | 40.0% | |
| TTGTGACATCATGTCACAAC+AGG | + | chr8.4:12789497-12789516 | MS.gene58952:intron | 40.0% | |
| ! | ATTGGTGGCAGATAATGCTT+AGG | - | chr8.4:12790248-12790267 | None:intergenic | 40.0% |
| ! | CATCTGAGGACTTTTCTCAA+TGG | + | chr8.4:12787685-12787704 | MS.gene58952:CDS | 40.0% |
| ! | CCACACATGAACAACTTTTG+TGG | + | chr8.4:12789053-12789072 | MS.gene58952:intron | 40.0% |
| ! | GTCAGAGAAGAAGCGTATAT+AGG | - | chr8.4:12789197-12789216 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr8.4:12789982-12790001 | None:intergenic | 40.0% |
| ! | TAAGTGATGGAGAGACAAGA+TGG | - | chr8.4:12788481-12788500 | None:intergenic | 40.0% |
| ! | TGTCACAACAAGAGCTTTTC+CGG | - | chr8.4:12789485-12789504 | None:intergenic | 40.0% |
| !! | CTAAACTGGTTCTGATGTTC+TGG | + | chr8.4:12790498-12790517 | MS.gene58952:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr8.4:12790119-12790138 | MS.gene58952:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr8.4:12790138-12790119 | None:intergenic | 40.0% |
| !!! | GGAGGGAGTACTATTTTTGA+AGG | + | chr8.4:12790136-12790155 | MS.gene58952:intron | 40.0% |
| !!! | GGGAGTACTATTTTTGAAGG+AGG | + | chr8.4:12790139-12790158 | MS.gene58952:intron | 40.0% |
| !!! | GTACTATTTTTGAAGGAGGG+GGG | + | chr8.4:12790143-12790162 | MS.gene58952:intron | 40.0% |
| !!! | TACTATTTTTGAAGGAGGGG+GGG | + | chr8.4:12790144-12790163 | MS.gene58952:intron | 40.0% |
| !!! | TGACACTCATTTTGAAACGG+AGG | - | chr8.4:12789879-12789898 | None:intergenic | 40.0% |
| ACTTCGGAGGCTTAAACACA+AGG | + | chr8.4:12787930-12787949 | MS.gene58952:CDS | 45.0% | |
| ATGTTCCCTCTGTGAAGTCT+AGG | + | chr8.4:12790473-12790492 | MS.gene58952:intron | 45.0% | |
| ATTGAAGGCAACAGATCACC+GGG | + | chr8.4:12790316-12790335 | MS.gene58952:CDS | 45.0% | |
| GACTAGGCTTCTGGATGTTA+TGG | + | chr8.4:12790600-12790619 | MS.gene58952:CDS | 45.0% | |
| TCATGTCACAACAGGGAATG+AGG | + | chr8.4:12789505-12789524 | MS.gene58952:intron | 45.0% | |
| TGAGACCATTTGTACTTCGG+AGG | + | chr8.4:12787917-12787936 | MS.gene58952:CDS | 45.0% | |
| TTCAACGATGACTAGGCTTC+TGG | + | chr8.4:12790591-12790610 | MS.gene58952:CDS | 45.0% | |
| ! | ACAACAAGAGCTTTTCCGGT+TGG | - | chr8.4:12789481-12789500 | None:intergenic | 45.0% |
| ! | CAACAAGAGCTTTTCCGGTT+GGG | - | chr8.4:12789480-12789499 | None:intergenic | 45.0% |
| !! | CAAAACAGTATCGGTACCTC+CGG | + | chr8.4:12790638-12790657 | MS.gene58952:CDS | 45.0% |
| !! | GACCATTTGATAGTGGACTG+AGG | + | chr8.4:12788797-12788816 | MS.gene58952:intron | 45.0% |
| !! | TGGTGCTATTGGCACTTCAA+AGG | + | chr8.4:12788730-12788749 | MS.gene58952:CDS | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr8.4:12790118-12790137 | MS.gene58952:intron | 45.0% |
| ACTGACCGAGCCTGACAATT+GGG | - | chr8.4:12789092-12789111 | None:intergenic | 50.0% | |
| ATACCTCCTCTGAGTGAAGC+TGG | - | chr8.4:12789166-12789185 | None:intergenic | 50.0% | |
| CATACATCAGGAGGTGATCG+TGG | + | chr8.4:12790670-12790689 | MS.gene58952:CDS | 50.0% | |
| CTAGGCTTTACTGTCTGAGG+AGG | + | chr8.4:12787858-12787877 | MS.gene58952:intron | 50.0% | |
| CTGATGTATGCCCATCCAAC+CGG | - | chr8.4:12790660-12790679 | None:intergenic | 50.0% | |
| GAGTGAAGCTGGCTGAGATA+TGG | - | chr8.4:12789155-12789174 | None:intergenic | 50.0% | |
| GTAGTGCCCAGAGTTCTTCA+AGG | - | chr8.4:12787635-12787654 | None:intergenic | 50.0% | |
| GTCAGTGCACAACTCTGTCA+TGG | + | chr8.4:12789106-12789125 | MS.gene58952:CDS | 50.0% | |
| TTGGATGGGCATACATCAGG+AGG | + | chr8.4:12790661-12790680 | MS.gene58952:CDS | 50.0% | |
| TTGTGGGAAGCTTGAGATGC+TGG | + | chr8.4:12790277-12790296 | MS.gene58952:CDS | 50.0% | |
| ATCGGTACCTCCGGTTGGAT+GGG | + | chr8.4:12790647-12790666 | MS.gene58952:CDS | 55.0% | |
| ATGTATGCCCATCCAACCGG+AGG | - | chr8.4:12790657-12790676 | None:intergenic | 55.0% | |
| CACTGACCGAGCCTGACAAT+TGG | - | chr8.4:12789093-12789112 | None:intergenic | 55.0% | |
| CGGTTGGATGGGCATACATC+AGG | + | chr8.4:12790658-12790677 | MS.gene58952:CDS | 55.0% | |
| TATCGGTACCTCCGGTTGGA+TGG | + | chr8.4:12790646-12790665 | MS.gene58952:CDS | 55.0% | |
| TCTCAGCCAGCTTCACTCAG+AGG | + | chr8.4:12789157-12789176 | MS.gene58952:CDS | 55.0% | |
| !! | ACAGTATCGGTACCTCCGGT+TGG | + | chr8.4:12790642-12790661 | MS.gene58952:CDS | 55.0% |
| CAGCCAGCTTCACTCAGAGG+AGG | + | chr8.4:12789160-12789179 | MS.gene58952:CDS | 60.0% | |
| TTGAAGGAGGGGGGGAGACA+GGG | + | chr8.4:12790152-12790171 | MS.gene58952:intron | 60.0% | |
| TTTGAAGGAGGGGGGGAGAC+AGG | + | chr8.4:12790151-12790170 | MS.gene58952:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 12787627 | 12790749 | 12787627 | ID=MS.gene58952 |
| chr8.4 | mRNA | 12787627 | 12790749 | 12787627 | ID=MS.gene58952.t1;Parent=MS.gene58952 |
| chr8.4 | exon | 12787627 | 12787752 | 12787627 | ID=MS.gene58952.t1.exon1;Parent=MS.gene58952.t1 |
| chr8.4 | CDS | 12787627 | 12787752 | 12787627 | ID=cds.MS.gene58952.t1;Parent=MS.gene58952.t1 |
| chr8.4 | exon | 12787862 | 12787951 | 12787862 | ID=MS.gene58952.t1.exon2;Parent=MS.gene58952.t1 |
| chr8.4 | CDS | 12787862 | 12787951 | 12787862 | ID=cds.MS.gene58952.t1;Parent=MS.gene58952.t1 |
| chr8.4 | exon | 12788635 | 12788751 | 12788635 | ID=MS.gene58952.t1.exon3;Parent=MS.gene58952.t1 |
| chr8.4 | CDS | 12788635 | 12788751 | 12788635 | ID=cds.MS.gene58952.t1;Parent=MS.gene58952.t1 |
| chr8.4 | exon | 12789101 | 12789181 | 12789101 | ID=MS.gene58952.t1.exon4;Parent=MS.gene58952.t1 |
| chr8.4 | CDS | 12789101 | 12789181 | 12789101 | ID=cds.MS.gene58952.t1;Parent=MS.gene58952.t1 |
| chr8.4 | exon | 12790230 | 12790337 | 12790230 | ID=MS.gene58952.t1.exon5;Parent=MS.gene58952.t1 |
| chr8.4 | CDS | 12790230 | 12790337 | 12790230 | ID=cds.MS.gene58952.t1;Parent=MS.gene58952.t1 |
| chr8.4 | exon | 12790580 | 12790749 | 12790580 | ID=MS.gene58952.t1.exon6;Parent=MS.gene58952.t1 |
| chr8.4 | CDS | 12790580 | 12790749 | 12790580 | ID=cds.MS.gene58952.t1;Parent=MS.gene58952.t1 |
| Gene Sequence |
| Protein sequence |
