Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060350.t1 | RHN64213.1 | 99.6 | 230 | 1 | 0 | 1 | 230 | 1153 | 1382 | 1.80E-126 | 461.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060350.t1 | F4IHS2 | 87.4 | 230 | 29 | 0 | 1 | 230 | 918 | 1147 | 1.1e-113 | 410.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060350.t1 | G7JJ22 | 99.6 | 230 | 1 | 0 | 1 | 230 | 1169 | 1398 | 1.3e-126 | 461.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene060350.t1 | TR | SNF2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060347 | MS.gene060350 | 0.850165 | 2.03E-60 | -1.69E-46 |
| MS.gene060349 | MS.gene060350 | 0.925696 | 1.29E-90 | -1.69E-46 |
| MS.gene060350 | MS.gene072981 | 0.821847 | 3.25E-53 | -1.69E-46 |
| MS.gene060350 | MS.gene32949 | 0.831496 | 1.62E-55 | -1.69E-46 |
| MS.gene060350 | MS.gene38564 | 0.810389 | 1.18E-50 | -1.69E-46 |
| MS.gene060350 | MS.gene38565 | 0.805772 | 1.14E-49 | -1.69E-46 |
| MS.gene060350 | MS.gene58951 | 0.846433 | 2.18E-59 | -1.69E-46 |
| MS.gene060350 | MS.gene58952 | 0.964555 | 1.79E-123 | -1.69E-46 |
| MS.gene060350 | MS.gene84839 | 0.862354 | 5.38E-64 | -1.69E-46 |
| MS.gene060350 | MS.gene84841 | 0.802258 | 6.11E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060350.t1 | MTR_4g118720 | 99.565 | 230 | 1 | 0 | 1 | 230 | 1169 | 1398 | 5.00e-157 | 482 |
| MS.gene060350.t1 | MTR_1g105050 | 51.709 | 234 | 97 | 5 | 1 | 230 | 539 | 760 | 4.14e-70 | 232 |
| MS.gene060350.t1 | MTR_5g005840 | 50.427 | 234 | 99 | 5 | 1 | 230 | 526 | 746 | 4.17e-69 | 229 |
| MS.gene060350.t1 | MTR_4g118845 | 44.828 | 232 | 108 | 5 | 1 | 230 | 163 | 376 | 2.96e-54 | 186 |
| MS.gene060350.t1 | MTR_4g118845 | 44.828 | 232 | 108 | 5 | 1 | 230 | 350 | 563 | 3.63e-54 | 187 |
| MS.gene060350.t1 | MTR_2g020000 | 46.121 | 232 | 105 | 6 | 1 | 230 | 353 | 566 | 5.69e-48 | 169 |
| MS.gene060350.t1 | MTR_8g030550 | 41.935 | 248 | 118 | 5 | 1 | 230 | 1148 | 1387 | 4.29e-45 | 161 |
| MS.gene060350.t1 | MTR_8g030550 | 41.270 | 252 | 114 | 5 | 1 | 230 | 1148 | 1387 | 4.39e-45 | 161 |
| MS.gene060350.t1 | MTR_8g030550 | 41.270 | 252 | 114 | 5 | 1 | 230 | 1148 | 1387 | 4.87e-45 | 160 |
| MS.gene060350.t1 | MTR_7g078090 | 40.637 | 251 | 117 | 5 | 1 | 230 | 1156 | 1395 | 9.95e-45 | 160 |
| MS.gene060350.t1 | MTR_5g020000 | 39.004 | 241 | 127 | 6 | 1 | 230 | 349 | 580 | 2.15e-43 | 155 |
| MS.gene060350.t1 | MTR_5g090090 | 38.589 | 241 | 118 | 5 | 1 | 230 | 786 | 1007 | 7.11e-36 | 134 |
| MS.gene060350.t1 | MTR_5g090090 | 38.589 | 241 | 118 | 5 | 1 | 230 | 786 | 1007 | 8.42e-36 | 134 |
| MS.gene060350.t1 | MTR_1g013190 | 37.607 | 234 | 122 | 6 | 1 | 230 | 469 | 682 | 5.63e-35 | 132 |
| MS.gene060350.t1 | MTR_3g106210 | 36.910 | 233 | 125 | 4 | 1 | 230 | 471 | 684 | 9.77e-35 | 131 |
| MS.gene060350.t1 | MTR_3g106210 | 36.910 | 233 | 125 | 4 | 1 | 230 | 471 | 684 | 9.95e-35 | 131 |
| MS.gene060350.t1 | MTR_3g106210 | 36.910 | 233 | 125 | 4 | 1 | 230 | 471 | 684 | 1.01e-34 | 131 |
| MS.gene060350.t1 | MTR_3g106210 | 36.910 | 233 | 125 | 4 | 1 | 230 | 471 | 684 | 1.16e-34 | 131 |
| MS.gene060350.t1 | MTR_3g053910 | 37.860 | 243 | 117 | 7 | 1 | 230 | 769 | 990 | 2.14e-34 | 130 |
| MS.gene060350.t1 | MTR_3g053910 | 37.860 | 243 | 117 | 7 | 1 | 230 | 740 | 961 | 2.22e-34 | 130 |
| MS.gene060350.t1 | MTR_4g096930 | 36.287 | 237 | 124 | 7 | 1 | 230 | 908 | 1124 | 3.01e-27 | 109 |
| MS.gene060350.t1 | MTR_7g045505 | 35.217 | 230 | 125 | 8 | 1 | 219 | 163 | 379 | 5.94e-25 | 103 |
| MS.gene060350.t1 | MTR_7g045505 | 35.217 | 230 | 125 | 8 | 1 | 219 | 163 | 379 | 6.24e-25 | 102 |
| MS.gene060350.t1 | MTR_7g090960 | 34.356 | 163 | 87 | 4 | 1 | 150 | 665 | 820 | 1.44e-23 | 99.0 |
| MS.gene060350.t1 | MTR_7g090960 | 44.737 | 76 | 41 | 1 | 155 | 230 | 1110 | 1184 | 9.78e-14 | 70.5 |
| MS.gene060350.t1 | MTR_7g090960 | 34.356 | 163 | 87 | 4 | 1 | 150 | 746 | 901 | 1.56e-23 | 99.0 |
| MS.gene060350.t1 | MTR_7g090960 | 44.737 | 76 | 41 | 1 | 155 | 230 | 1191 | 1265 | 9.30e-14 | 70.5 |
| MS.gene060350.t1 | MTR_1g069755 | 31.780 | 236 | 141 | 8 | 1 | 230 | 587 | 808 | 1.82e-23 | 99.0 |
| MS.gene060350.t1 | MTR_1g053955 | 39.416 | 137 | 67 | 3 | 1 | 131 | 683 | 809 | 4.14e-22 | 94.7 |
| MS.gene060350.t1 | MTR_1g053955 | 43.421 | 76 | 42 | 1 | 155 | 230 | 1061 | 1135 | 8.57e-13 | 67.8 |
| MS.gene060350.t1 | MTR_8g010750 | 84.314 | 51 | 8 | 0 | 10 | 60 | 416 | 466 | 3.04e-20 | 89.0 |
| MS.gene060350.t1 | MTR_7g039320 | 29.224 | 219 | 106 | 6 | 1 | 219 | 212 | 381 | 3.09e-17 | 80.5 |
| MS.gene060350.t1 | MTR_7g039320 | 29.224 | 219 | 106 | 6 | 1 | 219 | 212 | 381 | 3.16e-17 | 80.5 |
| MS.gene060350.t1 | MTR_8g094070 | 27.206 | 272 | 140 | 10 | 1 | 228 | 557 | 814 | 1.19e-16 | 79.0 |
| MS.gene060350.t1 | MTR_8g094070 | 27.206 | 272 | 140 | 10 | 1 | 228 | 557 | 814 | 1.40e-16 | 78.6 |
| MS.gene060350.t1 | MTR_4g035100 | 26.592 | 267 | 143 | 8 | 1 | 219 | 1617 | 1878 | 2.18e-16 | 78.2 |
| MS.gene060350.t1 | MTR_4g035100 | 26.592 | 267 | 143 | 8 | 1 | 219 | 1617 | 1878 | 2.20e-16 | 78.2 |
| MS.gene060350.t1 | MTR_4g077600 | 38.614 | 101 | 53 | 3 | 114 | 211 | 47 | 141 | 1.10e-15 | 72.4 |
| MS.gene060350.t1 | MTR_4g077600 | 34.286 | 140 | 77 | 5 | 82 | 215 | 56 | 186 | 1.14e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060350.t1 | AT2G28290 | 87.391 | 230 | 29 | 0 | 1 | 230 | 918 | 1147 | 1.34e-130 | 406 |
| MS.gene060350.t1 | AT2G28290 | 87.391 | 230 | 29 | 0 | 1 | 230 | 918 | 1147 | 1.34e-130 | 406 |
| MS.gene060350.t1 | AT2G28290 | 87.391 | 230 | 29 | 0 | 1 | 230 | 918 | 1147 | 1.34e-130 | 406 |
| MS.gene060350.t1 | AT2G28290 | 87.391 | 230 | 29 | 0 | 1 | 230 | 919 | 1148 | 1.34e-130 | 406 |
| MS.gene060350.t1 | AT2G28290 | 87.391 | 230 | 29 | 0 | 1 | 230 | 918 | 1147 | 1.34e-130 | 406 |
| MS.gene060350.t1 | AT2G28290 | 87.391 | 230 | 29 | 0 | 1 | 230 | 919 | 1148 | 1.34e-130 | 406 |
| MS.gene060350.t1 | AT5G19310 | 51.709 | 234 | 97 | 5 | 1 | 230 | 284 | 505 | 5.45e-72 | 234 |
| MS.gene060350.t1 | AT3G06010 | 50.000 | 238 | 95 | 5 | 1 | 230 | 566 | 787 | 2.88e-71 | 235 |
| MS.gene060350.t1 | AT5G19310 | 51.709 | 234 | 97 | 5 | 1 | 230 | 548 | 769 | 1.17e-70 | 233 |
| MS.gene060350.t1 | AT5G18620 | 44.397 | 232 | 109 | 6 | 1 | 230 | 356 | 569 | 9.45e-47 | 166 |
| MS.gene060350.t1 | AT3G06400 | 45.690 | 232 | 106 | 6 | 1 | 230 | 351 | 564 | 1.01e-46 | 166 |
| MS.gene060350.t1 | AT3G06400 | 45.690 | 232 | 106 | 6 | 1 | 230 | 351 | 564 | 1.07e-46 | 165 |
| MS.gene060350.t1 | AT3G06400 | 45.690 | 232 | 106 | 6 | 1 | 230 | 351 | 564 | 1.10e-46 | 165 |
| MS.gene060350.t1 | AT5G18620 | 44.397 | 232 | 109 | 6 | 1 | 230 | 356 | 569 | 1.25e-46 | 165 |
| MS.gene060350.t1 | AT2G46020 | 41.434 | 251 | 115 | 5 | 1 | 230 | 1143 | 1382 | 4.09e-45 | 161 |
| MS.gene060350.t1 | AT2G46020 | 41.434 | 251 | 115 | 5 | 1 | 230 | 1143 | 1382 | 4.09e-45 | 161 |
| MS.gene060350.t1 | AT2G46020 | 41.434 | 251 | 115 | 5 | 1 | 230 | 1143 | 1382 | 4.09e-45 | 161 |
| MS.gene060350.t1 | AT2G46020 | 41.434 | 251 | 115 | 5 | 1 | 230 | 1142 | 1381 | 4.59e-45 | 161 |
| MS.gene060350.t1 | AT2G46020 | 41.434 | 251 | 115 | 5 | 1 | 230 | 1142 | 1381 | 4.59e-45 | 161 |
| MS.gene060350.t1 | AT2G46020 | 41.434 | 251 | 115 | 5 | 1 | 230 | 1142 | 1381 | 4.59e-45 | 161 |
| MS.gene060350.t1 | AT2G25170 | 35.622 | 233 | 128 | 4 | 1 | 230 | 473 | 686 | 1.28e-35 | 134 |
| MS.gene060350.t1 | AT2G25170 | 35.622 | 233 | 128 | 4 | 1 | 230 | 456 | 669 | 1.31e-35 | 134 |
| MS.gene060350.t1 | AT2G25170 | 35.622 | 233 | 128 | 4 | 1 | 230 | 456 | 669 | 1.31e-35 | 134 |
| MS.gene060350.t1 | AT2G25170 | 35.622 | 233 | 128 | 4 | 1 | 230 | 482 | 695 | 1.37e-35 | 134 |
| MS.gene060350.t1 | AT5G66750 | 38.333 | 240 | 130 | 6 | 1 | 230 | 367 | 598 | 1.38e-35 | 133 |
| MS.gene060350.t1 | AT2G13370 | 38.589 | 241 | 116 | 6 | 1 | 230 | 794 | 1013 | 1.96e-35 | 133 |
| MS.gene060350.t1 | AT2G13370 | 38.589 | 241 | 116 | 6 | 1 | 230 | 794 | 1013 | 1.96e-35 | 133 |
| MS.gene060350.t1 | AT2G13370 | 38.589 | 241 | 116 | 6 | 1 | 230 | 794 | 1013 | 1.96e-35 | 133 |
| MS.gene060350.t1 | AT4G31900 | 35.776 | 232 | 124 | 5 | 1 | 230 | 349 | 557 | 2.27e-32 | 124 |
| MS.gene060350.t1 | AT4G31900 | 35.776 | 232 | 124 | 5 | 1 | 230 | 390 | 598 | 2.51e-32 | 124 |
| MS.gene060350.t1 | AT4G31900 | 35.776 | 232 | 124 | 5 | 1 | 230 | 390 | 598 | 2.56e-32 | 124 |
| MS.gene060350.t1 | AT2G44980 | 32.083 | 240 | 138 | 7 | 1 | 230 | 218 | 442 | 1.47e-23 | 99.0 |
| MS.gene060350.t1 | AT3G12810 | 40.146 | 137 | 66 | 3 | 1 | 131 | 698 | 824 | 1.84e-22 | 95.9 |
| MS.gene060350.t1 | AT3G12810 | 43.421 | 76 | 42 | 1 | 155 | 230 | 1074 | 1148 | 1.86e-11 | 63.9 |
| MS.gene060350.t1 | AT3G12810 | 40.146 | 137 | 66 | 3 | 1 | 131 | 694 | 820 | 1.89e-22 | 95.9 |
| MS.gene060350.t1 | AT3G12810 | 43.421 | 76 | 42 | 1 | 155 | 230 | 1070 | 1144 | 1.91e-11 | 63.9 |
| MS.gene060350.t1 | AT2G18760 | 30.213 | 235 | 146 | 7 | 1 | 230 | 638 | 859 | 2.10e-22 | 95.9 |
| MS.gene060350.t1 | AT2G18760 | 30.213 | 235 | 146 | 7 | 1 | 230 | 579 | 800 | 2.60e-22 | 95.5 |
| MS.gene060350.t1 | AT2G18760 | 30.213 | 235 | 146 | 7 | 1 | 230 | 579 | 800 | 2.60e-22 | 95.5 |
| MS.gene060350.t1 | AT2G18760 | 30.213 | 235 | 146 | 7 | 1 | 230 | 579 | 800 | 2.60e-22 | 95.5 |
| MS.gene060350.t1 | AT2G18760 | 30.213 | 235 | 146 | 7 | 1 | 230 | 579 | 800 | 2.60e-22 | 95.5 |
| MS.gene060350.t1 | AT2G18760 | 30.213 | 235 | 146 | 7 | 1 | 230 | 579 | 800 | 2.60e-22 | 95.5 |
| MS.gene060350.t1 | AT2G18760 | 30.213 | 235 | 146 | 7 | 1 | 230 | 579 | 800 | 2.60e-22 | 95.5 |
| MS.gene060350.t1 | AT5G44800 | 34.599 | 237 | 128 | 7 | 1 | 230 | 863 | 1079 | 4.08e-22 | 95.1 |
| MS.gene060350.t1 | AT3G57300 | 34.752 | 141 | 75 | 3 | 1 | 131 | 754 | 887 | 5.74e-22 | 94.4 |
| MS.gene060350.t1 | AT3G57300 | 34.752 | 141 | 75 | 3 | 1 | 131 | 787 | 920 | 6.00e-22 | 94.4 |
| MS.gene060350.t1 | AT3G57300 | 43.421 | 76 | 42 | 1 | 155 | 230 | 1238 | 1312 | 2.39e-13 | 69.3 |
| MS.gene060350.t1 | AT3G57300 | 34.752 | 141 | 75 | 3 | 1 | 131 | 754 | 887 | 6.34e-22 | 94.4 |
| MS.gene060350.t1 | AT3G57300 | 43.421 | 76 | 42 | 1 | 155 | 230 | 1205 | 1279 | 2.50e-13 | 69.3 |
| MS.gene060350.t1 | AT3G57300 | 34.752 | 141 | 75 | 3 | 1 | 131 | 754 | 887 | 6.34e-22 | 94.4 |
| MS.gene060350.t1 | AT3G57300 | 43.421 | 76 | 42 | 1 | 155 | 230 | 1205 | 1279 | 2.50e-13 | 69.3 |
| MS.gene060350.t1 | AT2G44980 | 32.314 | 229 | 133 | 7 | 1 | 219 | 223 | 439 | 7.37e-22 | 94.0 |
| MS.gene060350.t1 | AT2G44980 | 32.314 | 229 | 133 | 7 | 1 | 219 | 224 | 440 | 7.80e-22 | 94.0 |
| MS.gene060350.t1 | AT2G02090 | 28.866 | 291 | 127 | 8 | 1 | 229 | 389 | 661 | 5.39e-21 | 91.7 |
Find 52 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATCTGTTGCCTTCAATTT+AGG | 0.199353 | 8.4:-12803029 | None:intergenic |
| CTGAGTAAGAAAATAAAATA+TGG | 0.241222 | 8.4:-12803446 | None:intergenic |
| GGGAATCAGGTTTGTTAAAT+AGG | 0.275446 | 8.4:-12803424 | None:intergenic |
| TTCAACGATGACTAGGCTTC+TGG | 0.299032 | 8.4:+12803310 | MS.gene060350:CDS |
| TTCCCACAAAGTCTAATAAT+TGG | 0.302423 | 8.4:-12802981 | None:intergenic |
| AAAATAAAATATGGGGAATC+AGG | 0.331015 | 8.4:-12803437 | None:intergenic |
| GACTAGGCTTCTGGATGTTA+TGG | 0.361626 | 8.4:+12803319 | MS.gene060350:CDS |
| CCACCAATTATTAGACTTTG+TGG | 0.371297 | 8.4:+12802978 | MS.gene060350:CDS |
| GAAGATAATCTTGGTGCTAT+TGG | 0.389929 | 8.4:+12801434 | MS.gene060350:CDS |
| TGAGTAAGAAAATAAAATAT+GGG | 0.403065 | 8.4:-12803445 | None:intergenic |
| TTGTGGGAAGCTTGAGATGC+TGG | 0.413428 | 8.4:+12802995 | MS.gene060350:CDS |
| AATAAGCCATTTGAGAGTAC+TGG | 0.421189 | 8.4:+12800427 | MS.gene060350:CDS |
| GAGTGAAGCTGGCTGAGATA+TGG | 0.433609 | 8.4:-12801867 | None:intergenic |
| TATCGGTACCTCCGGTTGGA+TGG | 0.443271 | 8.4:+12803365 | MS.gene060350:CDS |
| TCAGATGAATTGAATATGTT+AGG | 0.446716 | 8.4:-12800385 | None:intergenic |
| CGGTTGGATGGGCATACATC+AGG | 0.462017 | 8.4:+12803377 | MS.gene060350:CDS |
| AGAACAACCTTGAAGAACTC+TGG | 0.464831 | 8.4:+12800341 | None:intergenic |
| GGTCCATAACTTACTTCATC+GGG | 0.467580 | 8.4:-12800460 | None:intergenic |
| CACCAATTATTAGACTTTGT+GGG | 0.469881 | 8.4:+12802979 | MS.gene060350:CDS |
| TTATCTCCAGTACTCTCAAA+TGG | 0.497413 | 8.4:-12800433 | None:intergenic |
| GTAGTGCCCAGAGTTCTTCA+AGG | 0.497845 | 8.4:-12800348 | None:intergenic |
| AAGAGAGTGGAAGATAATCT+TGG | 0.502358 | 8.4:+12801425 | MS.gene060350:CDS |
| GTACAAATGGTCTCAAAACT+TGG | 0.503024 | 8.4:-12800625 | None:intergenic |
| CTGATGTATGCCCATCCAAC+CGG | 0.507554 | 8.4:-12803376 | None:intergenic |
| ATCGGTACCTCCGGTTGGAT+GGG | 0.515675 | 8.4:+12803366 | MS.gene060350:CDS |
| ATACCTCCTCTGAGTGAAGC+TGG | 0.516305 | 8.4:-12801878 | None:intergenic |
| TTAAGCCTCCGAAGTACAAA+TGG | 0.527849 | 8.4:-12800638 | None:intergenic |
| TAACTAGGCTTTACTGTCTG+AGG | 0.531178 | 8.4:+12800571 | MS.gene060350:intron |
| TGGTGCTATTGGCACTTCAA+AGG | 0.533753 | 8.4:+12801445 | MS.gene060350:CDS |
| AATTGAAGGCAACAGATCAC+CGG | 0.537031 | 8.4:+12803033 | MS.gene060350:CDS |
| TGGTCCATAACTTACTTCAT+CGG | 0.540847 | 8.4:-12800461 | None:intergenic |
| CCACAAAGTCTAATAATTGG+TGG | 0.541494 | 8.4:-12802978 | None:intergenic |
| GAACAACCTTGAAGAACTCT+GGG | 0.544637 | 8.4:+12800342 | None:intergenic |
| CAAAACAGTATCGGTACCTC+CGG | 0.544822 | 8.4:+12803357 | MS.gene060350:CDS |
| ATTGGTGGCAGATAATGCTT+AGG | 0.546210 | 8.4:-12802963 | None:intergenic |
| GTCAGTGCACAACTCTGTCA+TGG | 0.547166 | 8.4:+12801821 | MS.gene060350:CDS |
| ACAGTATCGGTACCTCCGGT+TGG | 0.566904 | 8.4:+12803361 | MS.gene060350:CDS |
| TGAGACCATTTGTACTTCGG+AGG | 0.576819 | 8.4:+12800633 | MS.gene060350:CDS |
| CCTTCAATTTAGGTAAAACA+CGG | 0.578291 | 8.4:-12803019 | None:intergenic |
| ACTTAACTTCAAAACAGTAT+CGG | 0.588455 | 8.4:+12803348 | MS.gene060350:CDS |
| ATAAGTCTCTCAATCTTCGA+AGG | 0.602056 | 8.4:-12801365 | None:intergenic |
| TGAGAGACTTATAAGATGTG+AGG | 0.619035 | 8.4:+12801376 | MS.gene060350:CDS |
| TAACATATTCAATTCATCTG+AGG | 0.623873 | 8.4:+12800387 | MS.gene060350:CDS |
| GAGTAAGAAAATAAAATATG+GGG | 0.631151 | 8.4:-12803444 | None:intergenic |
| TCTCAGCCAGCTTCACTCAG+AGG | 0.638451 | 8.4:+12801872 | MS.gene060350:CDS |
| ATTGAAGGCAACAGATCACC+GGG | 0.638971 | 8.4:+12803034 | MS.gene060350:CDS |
| CATACATCAGGAGGTGATCG+TGG | 0.646200 | 8.4:+12803389 | MS.gene060350:CDS |
| ACTTCGGAGGCTTAAACACA+AGG | 0.649914 | 8.4:+12800646 | MS.gene060350:CDS |
| CAGCCAGCTTCACTCAGAGG+AGG | 0.657729 | 8.4:+12801875 | MS.gene060350:CDS |
| CTAGGCTTTACTGTCTGAGG+AGG | 0.660304 | 8.4:+12800574 | MS.gene060350:intron |
| TTGGATGGGCATACATCAGG+AGG | 0.660334 | 8.4:+12803380 | MS.gene060350:CDS |
| ATGTATGCCCATCCAACCGG+AGG | 0.684533 | 8.4:-12803373 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAATACAAAATCA+AGG | - | chr8.4:12800536-12800555 | None:intergenic | 10.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr8.4:12802749-12802768 | None:intergenic | 15.0% |
| !! | AAGAATAATGAATGTATAAA+TGG | - | chr8.4:12800899-12800918 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr8.4:12802748-12802767 | MS.gene060350:intron | 15.0% |
| !! | ATTTACAAACCAAAAAAAAA+AGG | - | chr8.4:12802491-12802510 | None:intergenic | 15.0% |
| !! | TGAAAATATGATATTGAAAT+CGG | + | chr8.4:12801224-12801243 | MS.gene060350:intron | 15.0% |
| !! | TGAGTAAGAAAATAAAATAT+GGG | - | chr8.4:12803448-12803467 | None:intergenic | 15.0% |
| !! | TTAAAAAATAAAGCAATGTA+TGG | + | chr8.4:12802246-12802265 | MS.gene060350:intron | 15.0% |
| !!! | CTTTTACTAGTAAATTTTTT+GGG | - | chr8.4:12800973-12800992 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr8.4:12802725-12802744 | None:intergenic | 15.0% |
| !!! | TCTTTTACTAGTAAATTTTT+TGG | - | chr8.4:12800974-12800993 | None:intergenic | 15.0% |
| !!! | TTCAAGATCATTTTATAAAT+TGG | + | chr8.4:12802072-12802091 | MS.gene060350:intron | 15.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr8.4:12802739-12802758 | MS.gene060350:intron | 20.0% |
| !! | AATCATCAATAAGTACATTA+GGG | - | chr8.4:12801934-12801953 | None:intergenic | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr8.4:12802782-12802801 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr8.4:12802662-12802681 | None:intergenic | 20.0% |
| !! | CCTATAATATAAGAAAACAT+TGG | - | chr8.4:12801331-12801350 | None:intergenic | 20.0% |
| !! | CTAAAAAATAAAGCAATGTA+TGG | + | chr8.4:12802119-12802138 | MS.gene060350:intron | 20.0% |
| !! | CTGAGTAAGAAAATAAAATA+TGG | - | chr8.4:12803449-12803468 | None:intergenic | 20.0% |
| !! | GAGTAAGAAAATAAAATATG+GGG | - | chr8.4:12803447-12803466 | None:intergenic | 20.0% |
| !! | TGAGATTTAAATTACATCTT+GGG | + | chr8.4:12801997-12802016 | MS.gene060350:intron | 20.0% |
| !! | TTGAGATTTAAATTACATCT+TGG | + | chr8.4:12801996-12802015 | MS.gene060350:intron | 20.0% |
| !!! | ATTTCTCTTCCTTTTTTTTT+TGG | + | chr8.4:12802479-12802498 | MS.gene060350:intron | 20.0% |
| !!! | CATACATTGCTTTATTTTTT+AGG | - | chr8.4:12802121-12802140 | None:intergenic | 20.0% |
| !!! | CCAATGTTTTCTTATATTAT+AGG | + | chr8.4:12801328-12801347 | MS.gene060350:intron | 20.0% |
| !!! | GATTGTTGTTTTTCAATTAA+AGG | + | chr8.4:12801675-12801694 | MS.gene060350:intron | 20.0% |
| !!! | GTGGAAAGATATTTTAATTA+GGG | - | chr8.4:12801752-12801771 | None:intergenic | 20.0% |
| !!! | TATTCTTTTAATTTTGCTTG+AGG | + | chr8.4:12800912-12800931 | MS.gene060350:intron | 20.0% |
| !!! | TCTTTTCTTTTTAATCAGAA+GGG | + | chr8.4:12801546-12801565 | MS.gene060350:intron | 20.0% |
| !!! | TGTGGAAAGATATTTTAATT+AGG | - | chr8.4:12801753-12801772 | None:intergenic | 20.0% |
| !!! | TGTGTAAGTTTTATATAGAT+GGG | - | chr8.4:12800489-12800508 | None:intergenic | 20.0% |
| !!! | TTCTTTTCTTTTTAATCAGA+AGG | + | chr8.4:12801545-12801564 | MS.gene060350:intron | 20.0% |
| !!! | TTGAATGGTTTTATATATGT+AGG | + | chr8.4:12801102-12801121 | MS.gene060350:intron | 20.0% |
| !!! | TTGTGTAAGTTTTATATAGA+TGG | - | chr8.4:12800490-12800509 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGGTTTGTAAATC+CGG | + | chr8.4:12802492-12802511 | MS.gene060350:intron | 20.0% |
| !!! | TTTTTTTTTTTTCCATTTGC+AGG | + | chr8.4:12802926-12802945 | MS.gene060350:intron | 20.0% |
| ! | AAAAGGAAGAGAAATAAACA+TGG | - | chr8.4:12802474-12802493 | None:intergenic | 25.0% |
| ! | AAAATAAAATATGGGGAATC+AGG | - | chr8.4:12803440-12803459 | None:intergenic | 25.0% |
| ! | AATTTATATTCCCAATTGTC+AGG | + | chr8.4:12801794-12801813 | MS.gene060350:intron | 25.0% |
| ! | ACTTAACTTCAAAACAGTAT+CGG | + | chr8.4:12803348-12803367 | MS.gene060350:CDS | 25.0% |
| ! | AGAAGCTAATAATATCAGTA+AGG | - | chr8.4:12801274-12801293 | None:intergenic | 25.0% |
| ! | ATAAACGTTAGTTCAATTTC+TGG | + | chr8.4:12801044-12801063 | MS.gene060350:intron | 25.0% |
| ! | ATAAATGGAAAAACATACAC+TGG | - | chr8.4:12800884-12800903 | None:intergenic | 25.0% |
| ! | ATCATTCAACAAAAAGCAAA+AGG | - | chr8.4:12801485-12801504 | None:intergenic | 25.0% |
| ! | CAATCATCAATAAGTACATT+AGG | - | chr8.4:12801935-12801954 | None:intergenic | 25.0% |
| ! | CACGAGTATACAAAAATTTA+AGG | - | chr8.4:12800709-12800728 | None:intergenic | 25.0% |
| ! | GTAATATAGAATTTGATGCA+TGG | + | chr8.4:12801068-12801087 | MS.gene060350:intron | 25.0% |
| ! | GTTACATTAGTAAATGTTAG+AGG | - | chr8.4:12801024-12801043 | None:intergenic | 25.0% |
| ! | GTTTGAAAAACATTCTGTTA+TGG | + | chr8.4:12802045-12802064 | MS.gene060350:intron | 25.0% |
| ! | TAAATGGAAAAACATACACT+GGG | - | chr8.4:12800883-12800902 | None:intergenic | 25.0% |
| ! | TAACATATTCAATTCATCTG+AGG | + | chr8.4:12800387-12800406 | MS.gene060350:CDS | 25.0% |
| ! | TCAGATGAATTGAATATGTT+AGG | - | chr8.4:12800388-12800407 | None:intergenic | 25.0% |
| !! | ATGGTATCTTTAAGTTTGAA+TGG | + | chr8.4:12801087-12801106 | MS.gene060350:intron | 25.0% |
| !! | TTAGGATATTTCTTTTTGTC+AGG | - | chr8.4:12802103-12802122 | None:intergenic | 25.0% |
| !!! | AAGTTTTATATAGATGGGAT+TGG | - | chr8.4:12800484-12800503 | None:intergenic | 25.0% |
| AATAAACATGGAATCTGAAG+TGG | - | chr8.4:12802462-12802481 | None:intergenic | 30.0% | |
| CACCAATTATTAGACTTTGT+GGG | + | chr8.4:12802979-12802998 | MS.gene060350:CDS | 30.0% | |
| CCTTCAATTTAGGTAAAACA+CGG | - | chr8.4:12803022-12803041 | None:intergenic | 30.0% | |
| GCATCTAATTTCTTTCACAT+TGG | + | chr8.4:12803090-12803109 | MS.gene060350:intron | 30.0% | |
| TAAGCTATTCACCAAACTAA+TGG | - | chr8.4:12802437-12802456 | None:intergenic | 30.0% | |
| TGCAAATATTGCTTTGATAC+CGG | - | chr8.4:12802514-12802533 | None:intergenic | 30.0% | |
| TTCCCACAAAGTCTAATAAT+TGG | - | chr8.4:12802984-12803003 | None:intergenic | 30.0% | |
| ! | AAAACTTTTGATGAAGAGAG+TGG | + | chr8.4:12801412-12801431 | MS.gene060350:CDS | 30.0% |
| ! | TTAGTGATTTGTGTGAGTAT+AGG | + | chr8.4:12802411-12802430 | MS.gene060350:intron | 30.0% |
| ! | TTTCAAGTCATTGTAAGTGA+TGG | - | chr8.4:12801209-12801228 | None:intergenic | 30.0% |
| ! | TTTTCTTTTCAACGATGACT+AGG | + | chr8.4:12803303-12803322 | MS.gene060350:CDS | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr8.4:12802831-12802850 | MS.gene060350:intron | 30.0% |
| !! | AAGTGACACTCATTTTGAAA+CGG | - | chr8.4:12802597-12802616 | None:intergenic | 30.0% |
| !! | GATATTTTGTAAACTTGCTC+TGG | + | chr8.4:12803145-12803164 | MS.gene060350:intron | 30.0% |
| !! | GTTGTTTTCTGTTTGTAACT+AGG | + | chr8.4:12800556-12800575 | MS.gene060350:intron | 30.0% |
| !! | TTCAAAATGAGTGTCACTTT+AGG | + | chr8.4:12802598-12802617 | MS.gene060350:intron | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr8.4:12802830-12802849 | None:intergenic | 30.0% |
| !!! | TTTTGAGACCATTTGTACTT+CGG | + | chr8.4:12800630-12800649 | MS.gene060350:CDS | 30.0% |
| AAATAAAGCAATGTATGGCG+AGG | + | chr8.4:12802124-12802143 | MS.gene060350:intron | 35.0% | |
| AAGAGAGTGGAAGATAATCT+TGG | + | chr8.4:12801425-12801444 | MS.gene060350:CDS | 35.0% | |
| ACTGCATTTCACTTAGAGAA+TGG | + | chr8.4:12801968-12801987 | MS.gene060350:intron | 35.0% | |
| AGCATATAGGATTTCATACC+CGG | - | chr8.4:12803055-12803074 | None:intergenic | 35.0% | |
| ATAAGTCTCTCAATCTTCGA+AGG | - | chr8.4:12801368-12801387 | None:intergenic | 35.0% | |
| ATAATATCAGTAAGGCAGAC+TGG | - | chr8.4:12801266-12801285 | None:intergenic | 35.0% | |
| ATGTATGGCGAGGTATAAAA+TGG | + | chr8.4:12802134-12802153 | MS.gene060350:intron | 35.0% | |
| CCACAAAGTCTAATAATTGG+TGG | - | chr8.4:12802981-12803000 | None:intergenic | 35.0% | |
| CCACCAATTATTAGACTTTG+TGG | + | chr8.4:12802978-12802997 | MS.gene060350:CDS | 35.0% | |
| GAAAAACATACACTGGGATA+AGG | - | chr8.4:12800877-12800896 | None:intergenic | 35.0% | |
| GTAACTTGACCATTTGATAG+TGG | + | chr8.4:12801505-12801524 | MS.gene060350:intron | 35.0% | |
| GTACAAATGGTCTCAAAACT+TGG | - | chr8.4:12800628-12800647 | None:intergenic | 35.0% | |
| GTGCAATATTGCACATGTTA+AGG | - | chr8.4:12801742-12801723 | None:intergenic | 35.0% | |
| TATAGTGATCTACCTGCAAA+TGG | - | chr8.4:12802941-12802960 | None:intergenic | 35.0% | |
| TGAAGTCTAGGAAACTAAAC+TGG | + | chr8.4:12803203-12803222 | MS.gene060350:intron | 35.0% | |
| TGAGAGACTTATAAGATGTG+AGG | + | chr8.4:12801376-12801395 | MS.gene060350:CDS | 35.0% | |
| TGATCTGTTGCCTTCAATTT+AGG | - | chr8.4:12803032-12803051 | None:intergenic | 35.0% | |
| TGCATCAGATAGCTTAAACA+TGG | - | chr8.4:12801139-12801158 | None:intergenic | 35.0% | |
| TGGTCCATAACTTACTTCAT+CGG | - | chr8.4:12800464-12800483 | None:intergenic | 35.0% | |
| TTATCTCCAGTACTCTCAAA+TGG | - | chr8.4:12800436-12800455 | None:intergenic | 35.0% | |
| TTGGAAACACAAGAACAACA+AGG | - | chr8.4:12801312-12801331 | None:intergenic | 35.0% | |
| TTGGGTCATATATTAGTGCA+AGG | - | chr8.4:12802177-12802196 | None:intergenic | 35.0% | |
| ! | AATAAGCCATTTGAGAGTAC+TGG | + | chr8.4:12800427-12800446 | MS.gene060350:CDS | 35.0% |
| ! | CATACTGCTAATGCTTTTAC+AGG | + | chr8.4:12803277-12803296 | MS.gene060350:intron | 35.0% |
| ! | CCGTGTTTTACCTAAATTGA+AGG | + | chr8.4:12803019-12803038 | MS.gene060350:CDS | 35.0% |
| ! | GAAGAAGCGTATATAGGATA+TGG | - | chr8.4:12801906-12801925 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr8.4:12802700-12802719 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr8.4:12802696-12802715 | None:intergenic | 35.0% |
| !! | GAAGATAATCTTGGTGCTAT+TGG | + | chr8.4:12801434-12801453 | MS.gene060350:CDS | 35.0% |
| !! | GGGAATCAGGTTTGTTAAAT+AGG | - | chr8.4:12803427-12803446 | None:intergenic | 35.0% |
| !!! | AGTACTATTTTTGAAGGAGG+GGG | + | chr8.4:12802858-12802877 | MS.gene060350:intron | 35.0% |
| !!! | GAGTACTATTTTTGAAGGAG+GGG | + | chr8.4:12802857-12802876 | MS.gene060350:intron | 35.0% |
| !!! | GGAGTACTATTTTTGAAGGA+GGG | + | chr8.4:12802856-12802875 | MS.gene060350:intron | 35.0% |
| AAATCCTATATGCTTGTCGC+TGG | + | chr8.4:12803061-12803080 | MS.gene060350:intron | 40.0% | |
| AATTGAAGGCAACAGATCAC+CGG | + | chr8.4:12803033-12803052 | MS.gene060350:CDS | 40.0% | |
| AGTTTCCTAGACTTCACAGA+GGG | - | chr8.4:12803199-12803218 | None:intergenic | 40.0% | |
| ATATTCCCAATTGTCAGGCT+CGG | + | chr8.4:12801799-12801818 | MS.gene060350:intron | 40.0% | |
| ATCCTCAGTCCACTATCAAA+TGG | - | chr8.4:12801517-12801536 | None:intergenic | 40.0% | |
| CCACAAAAGTTGTTCATGTG+TGG | - | chr8.4:12801771-12801790 | None:intergenic | 40.0% | |
| GCACTAATATATGACCCAAC+CGG | + | chr8.4:12802178-12802197 | MS.gene060350:intron | 40.0% | |
| GGTCCATAACTTACTTCATC+GGG | - | chr8.4:12800463-12800482 | None:intergenic | 40.0% | |
| GTAAATGTTAGAGGCAACAC+AGG | - | chr8.4:12801015-12801034 | None:intergenic | 40.0% | |
| GTGAGTATAGGCCATTAGTT+TGG | + | chr8.4:12802423-12802442 | MS.gene060350:intron | 40.0% | |
| TAACTAGGCTTTACTGTCTG+AGG | + | chr8.4:12800571-12800590 | MS.gene060350:intron | 40.0% | |
| TAATCCAGCGACAAGCATAT+AGG | - | chr8.4:12803068-12803087 | None:intergenic | 40.0% | |
| TAGTTTCCTAGACTTCACAG+AGG | - | chr8.4:12803200-12803219 | None:intergenic | 40.0% | |
| TATTTGACTACTGCAGCAAG+AGG | + | chr8.4:12802536-12802555 | MS.gene060350:intron | 40.0% | |
| TCACCCGATGAAGTAAGTTA+TGG | + | chr8.4:12800457-12800476 | MS.gene060350:intron | 40.0% | |
| TGTGACATCATGTCACAACA+GGG | + | chr8.4:12802213-12802232 | MS.gene060350:intron | 40.0% | |
| TTAAGCCTCCGAAGTACAAA+TGG | - | chr8.4:12800641-12800660 | None:intergenic | 40.0% | |
| TTGTGACATCATGTCACAAC+AGG | + | chr8.4:12802212-12802231 | MS.gene060350:intron | 40.0% | |
| ! | ATTGGTGGCAGATAATGCTT+AGG | - | chr8.4:12802966-12802985 | None:intergenic | 40.0% |
| ! | CATCTGAGGACTTTTCTCAA+TGG | + | chr8.4:12800401-12800420 | MS.gene060350:CDS | 40.0% |
| ! | CCACACATGAACAACTTTTG+TGG | + | chr8.4:12801768-12801787 | MS.gene060350:intron | 40.0% |
| ! | GTCAGAGAAGAAGCGTATAT+AGG | - | chr8.4:12801912-12801931 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr8.4:12802697-12802716 | None:intergenic | 40.0% |
| ! | TAAGTGATGGAGAGACAAGA+TGG | - | chr8.4:12801196-12801215 | None:intergenic | 40.0% |
| ! | TGTCACAACAAGAGCTTTTC+CGG | - | chr8.4:12802200-12802219 | None:intergenic | 40.0% |
| !! | CTAAACTGGTTCTGATGTTC+TGG | + | chr8.4:12803217-12803236 | MS.gene060350:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr8.4:12802835-12802854 | MS.gene060350:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr8.4:12802854-12802835 | None:intergenic | 40.0% |
| !!! | GGAGGGAGTACTATTTTTGA+AGG | + | chr8.4:12802852-12802871 | MS.gene060350:intron | 40.0% |
| !!! | GGGAGTACTATTTTTGAAGG+AGG | + | chr8.4:12802855-12802874 | MS.gene060350:intron | 40.0% |
| !!! | GTACTATTTTTGAAGGAGGG+GGG | + | chr8.4:12802859-12802878 | MS.gene060350:intron | 40.0% |
| !!! | TGACACTCATTTTGAAACGG+AGG | - | chr8.4:12802594-12802613 | None:intergenic | 40.0% |
| ACTTCGGAGGCTTAAACACA+AGG | + | chr8.4:12800646-12800665 | MS.gene060350:CDS | 45.0% | |
| ATGTTCCCTCTGTGAAGTCT+AGG | + | chr8.4:12803191-12803210 | MS.gene060350:intron | 45.0% | |
| ATTGAAGGCAACAGATCACC+GGG | + | chr8.4:12803034-12803053 | MS.gene060350:CDS | 45.0% | |
| GACTAGGCTTCTGGATGTTA+TGG | + | chr8.4:12803319-12803338 | MS.gene060350:CDS | 45.0% | |
| TCATGTCACAACAGGGAATG+AGG | + | chr8.4:12802220-12802239 | MS.gene060350:intron | 45.0% | |
| TGAGACCATTTGTACTTCGG+AGG | + | chr8.4:12800633-12800652 | MS.gene060350:CDS | 45.0% | |
| TTCAACGATGACTAGGCTTC+TGG | + | chr8.4:12803310-12803329 | MS.gene060350:CDS | 45.0% | |
| ! | ACAACAAGAGCTTTTCCGGT+TGG | - | chr8.4:12802196-12802215 | None:intergenic | 45.0% |
| ! | CAACAAGAGCTTTTCCGGTT+GGG | - | chr8.4:12802195-12802214 | None:intergenic | 45.0% |
| !! | CAAAACAGTATCGGTACCTC+CGG | + | chr8.4:12803357-12803376 | MS.gene060350:CDS | 45.0% |
| !! | GACCATTTGATAGTGGACTG+AGG | + | chr8.4:12801512-12801531 | MS.gene060350:intron | 45.0% |
| !! | TGGTGCTATTGGCACTTCAA+AGG | + | chr8.4:12801445-12801464 | MS.gene060350:CDS | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr8.4:12802834-12802853 | MS.gene060350:intron | 45.0% |
| ACTGACCGAGCCTGACAATT+GGG | - | chr8.4:12801807-12801826 | None:intergenic | 50.0% | |
| ATACCTCCTCTGAGTGAAGC+TGG | - | chr8.4:12801881-12801900 | None:intergenic | 50.0% | |
| CATACATCAGGAGGTGATCG+TGG | + | chr8.4:12803389-12803408 | MS.gene060350:CDS | 50.0% | |
| CTAGGCTTTACTGTCTGAGG+AGG | + | chr8.4:12800574-12800593 | MS.gene060350:intron | 50.0% | |
| CTGATGTATGCCCATCCAAC+CGG | - | chr8.4:12803379-12803398 | None:intergenic | 50.0% | |
| GAGTGAAGCTGGCTGAGATA+TGG | - | chr8.4:12801870-12801889 | None:intergenic | 50.0% | |
| GTAGTGCCCAGAGTTCTTCA+AGG | - | chr8.4:12800351-12800370 | None:intergenic | 50.0% | |
| GTCAGTGCACAACTCTGTCA+TGG | + | chr8.4:12801821-12801840 | MS.gene060350:CDS | 50.0% | |
| TTGGATGGGCATACATCAGG+AGG | + | chr8.4:12803380-12803399 | MS.gene060350:CDS | 50.0% | |
| TTGTGGGAAGCTTGAGATGC+TGG | + | chr8.4:12802995-12803014 | MS.gene060350:CDS | 50.0% | |
| ATCGGTACCTCCGGTTGGAT+GGG | + | chr8.4:12803366-12803385 | MS.gene060350:CDS | 55.0% | |
| ATGTATGCCCATCCAACCGG+AGG | - | chr8.4:12803376-12803395 | None:intergenic | 55.0% | |
| CACTGACCGAGCCTGACAAT+TGG | - | chr8.4:12801808-12801827 | None:intergenic | 55.0% | |
| CGGTTGGATGGGCATACATC+AGG | + | chr8.4:12803377-12803396 | MS.gene060350:CDS | 55.0% | |
| TATCGGTACCTCCGGTTGGA+TGG | + | chr8.4:12803365-12803384 | MS.gene060350:CDS | 55.0% | |
| TCTCAGCCAGCTTCACTCAG+AGG | + | chr8.4:12801872-12801891 | MS.gene060350:CDS | 55.0% | |
| TTTGAAGGAGGGGGGAGACA+GGG | + | chr8.4:12802867-12802886 | MS.gene060350:intron | 55.0% | |
| !! | ACAGTATCGGTACCTCCGGT+TGG | + | chr8.4:12803361-12803380 | MS.gene060350:CDS | 55.0% |
| !! | TTTTGAAGGAGGGGGGAGAC+AGG | + | chr8.4:12802866-12802885 | MS.gene060350:intron | 55.0% |
| CAGCCAGCTTCACTCAGAGG+AGG | + | chr8.4:12801875-12801894 | MS.gene060350:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 12800343 | 12803468 | 12800343 | ID=MS.gene060350 |
| chr8.4 | mRNA | 12800343 | 12803468 | 12800343 | ID=MS.gene060350.t1;Parent=MS.gene060350 |
| chr8.4 | exon | 12800343 | 12800468 | 12800343 | ID=MS.gene060350.t1.exon1;Parent=MS.gene060350.t1 |
| chr8.4 | CDS | 12800343 | 12800468 | 12800343 | ID=cds.MS.gene060350.t1;Parent=MS.gene060350.t1 |
| chr8.4 | exon | 12800578 | 12800667 | 12800578 | ID=MS.gene060350.t1.exon2;Parent=MS.gene060350.t1 |
| chr8.4 | CDS | 12800578 | 12800667 | 12800578 | ID=cds.MS.gene060350.t1;Parent=MS.gene060350.t1 |
| chr8.4 | exon | 12801350 | 12801466 | 12801350 | ID=MS.gene060350.t1.exon3;Parent=MS.gene060350.t1 |
| chr8.4 | CDS | 12801350 | 12801466 | 12801350 | ID=cds.MS.gene060350.t1;Parent=MS.gene060350.t1 |
| chr8.4 | exon | 12801816 | 12801896 | 12801816 | ID=MS.gene060350.t1.exon4;Parent=MS.gene060350.t1 |
| chr8.4 | CDS | 12801816 | 12801896 | 12801816 | ID=cds.MS.gene060350.t1;Parent=MS.gene060350.t1 |
| chr8.4 | exon | 12802948 | 12803055 | 12802948 | ID=MS.gene060350.t1.exon5;Parent=MS.gene060350.t1 |
| chr8.4 | CDS | 12802948 | 12803055 | 12802948 | ID=cds.MS.gene060350.t1;Parent=MS.gene060350.t1 |
| chr8.4 | exon | 12803299 | 12803468 | 12803299 | ID=MS.gene060350.t1.exon6;Parent=MS.gene060350.t1 |
| chr8.4 | CDS | 12803299 | 12803468 | 12803299 | ID=cds.MS.gene060350.t1;Parent=MS.gene060350.t1 |
| Gene Sequence |
| Protein sequence |
