Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58973.t1 | XP_003615684.2 | 83.1 | 568 | 28 | 4 | 1 | 526 | 39 | 580 | 8.90E-254 | 885.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58973.t1 | Q8GV43 | 53.3 | 546 | 175 | 5 | 25 | 526 | 90 | 599 | 3.6e-163 | 576.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58973.t1 | G7KE98 | 83.1 | 568 | 28 | 4 | 1 | 526 | 39 | 580 | 6.4e-254 | 885.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049660 | MS.gene58973 | 0.802056 | 6.72E-49 | -1.69E-46 |
| MS.gene05054 | MS.gene58973 | 0.80727 | 5.49E-50 | -1.69E-46 |
| MS.gene055251 | MS.gene58973 | 0.801117 | 1.05E-48 | -1.69E-46 |
| MS.gene056526 | MS.gene58973 | 0.809792 | 1.59E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58973.t1 | MTR_5g071010 | 83.803 | 568 | 24 | 4 | 1 | 526 | 39 | 580 | 0.0 | 926 |
| MS.gene58973.t1 | MTR_5g082620 | 52.890 | 571 | 189 | 9 | 1 | 526 | 40 | 575 | 0.0 | 582 |
| MS.gene58973.t1 | MTR_5g082590 | 50.609 | 575 | 193 | 8 | 1 | 526 | 36 | 568 | 0.0 | 556 |
| MS.gene58973.t1 | MTR_3g070720 | 51.754 | 570 | 196 | 8 | 1 | 526 | 45 | 579 | 0.0 | 550 |
| MS.gene58973.t1 | MTR_3g069280 | 53.143 | 525 | 173 | 7 | 47 | 526 | 62 | 558 | 0.0 | 528 |
| MS.gene58973.t1 | MTR_5g082580 | 44.330 | 582 | 234 | 8 | 1 | 526 | 46 | 593 | 8.89e-165 | 481 |
| MS.gene58973.t1 | MTR_3g070710 | 45.804 | 572 | 224 | 12 | 1 | 526 | 42 | 573 | 5.15e-159 | 465 |
| MS.gene58973.t1 | MTR_3g070560 | 43.881 | 572 | 237 | 10 | 1 | 526 | 41 | 574 | 4.73e-151 | 445 |
| MS.gene58973.t1 | MTR_5g071040 | 44.190 | 568 | 213 | 11 | 1 | 526 | 54 | 559 | 1.12e-144 | 428 |
| MS.gene58973.t1 | MTR_3g070720 | 48.361 | 488 | 173 | 8 | 1 | 444 | 45 | 497 | 1.46e-142 | 420 |
| MS.gene58973.t1 | MTR_3g070720 | 47.826 | 460 | 161 | 8 | 1 | 416 | 45 | 469 | 3.06e-124 | 373 |
| MS.gene58973.t1 | MTR_3g070560 | 41.743 | 436 | 174 | 7 | 135 | 526 | 2 | 401 | 5.18e-108 | 329 |
| MS.gene58973.t1 | MTR_3g070720 | 47.355 | 397 | 145 | 7 | 1 | 368 | 45 | 406 | 4.93e-100 | 308 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58973.t1 | AT2G40116 | 52.531 | 573 | 182 | 8 | 1 | 526 | 70 | 599 | 0.0 | 591 |
| MS.gene58973.t1 | AT5G58700 | 53.860 | 570 | 186 | 8 | 1 | 525 | 45 | 582 | 0.0 | 588 |
| MS.gene58973.t1 | AT5G58700 | 53.860 | 570 | 186 | 8 | 1 | 525 | 45 | 582 | 0.0 | 588 |
| MS.gene58973.t1 | AT5G58690 | 51.056 | 568 | 190 | 6 | 1 | 526 | 24 | 545 | 0.0 | 552 |
| MS.gene58973.t1 | AT5G58690 | 51.056 | 568 | 190 | 6 | 1 | 526 | 43 | 564 | 0.0 | 552 |
| MS.gene58973.t1 | AT5G58690 | 51.056 | 568 | 190 | 6 | 1 | 526 | 43 | 564 | 0.0 | 552 |
| MS.gene58973.t1 | AT3G08510 | 52.189 | 571 | 185 | 11 | 1 | 526 | 40 | 567 | 0.0 | 542 |
| MS.gene58973.t1 | AT3G08510 | 52.189 | 571 | 185 | 11 | 1 | 526 | 40 | 567 | 0.0 | 542 |
| MS.gene58973.t1 | AT3G55940 | 50.963 | 571 | 193 | 9 | 1 | 525 | 40 | 569 | 0.0 | 528 |
| MS.gene58973.t1 | AT5G58700 | 55.090 | 501 | 150 | 7 | 70 | 525 | 4 | 474 | 0.0 | 522 |
| MS.gene58973.t1 | AT3G08510 | 49.037 | 571 | 174 | 12 | 1 | 526 | 40 | 538 | 2.54e-165 | 480 |
| MS.gene58973.t1 | AT3G08510 | 49.037 | 571 | 174 | 12 | 1 | 526 | 40 | 538 | 2.54e-165 | 480 |
| MS.gene58973.t1 | AT5G58670 | 42.281 | 570 | 222 | 8 | 1 | 526 | 39 | 545 | 5.82e-145 | 428 |
| MS.gene58973.t1 | AT4G38530 | 42.207 | 571 | 220 | 12 | 1 | 526 | 39 | 544 | 1.25e-138 | 412 |
| MS.gene58973.t1 | AT3G47290 | 37.500 | 560 | 238 | 11 | 3 | 526 | 34 | 517 | 6.60e-114 | 348 |
| MS.gene58973.t1 | AT3G47290 | 37.455 | 558 | 237 | 11 | 3 | 524 | 34 | 515 | 2.72e-112 | 345 |
| MS.gene58973.t1 | AT3G47220 | 37.611 | 561 | 235 | 15 | 3 | 526 | 35 | 517 | 1.16e-105 | 327 |
Find 98 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTCAATGCCTTTATAAT+AGG | 0.127135 | 5.2:-39760873 | None:intergenic |
| GGATTGAATACCTCATTATT+TGG | 0.164810 | 5.2:-39763376 | None:intergenic |
| CTGCTCAGGTAATTTCTTAT+AGG | 0.203651 | 5.2:+39762093 | MS.gene58973:CDS |
| AACATCATCTTTGGTGGAAT+TGG | 0.217676 | 5.2:-39760928 | None:intergenic |
| AGAATTCTCTCTCACACTTT+TGG | 0.234698 | 5.2:-39762499 | None:intergenic |
| GCAAGTTCAGGCACAGTTAA+AGG | 0.267197 | 5.2:-39764293 | None:intergenic |
| CAAATGTTTGAAATCCATTA+AGG | 0.273167 | 5.2:+39761992 | MS.gene58973:CDS |
| GACCAGTATATATGAAATAA+TGG | 0.273183 | 5.2:-39760800 | None:intergenic |
| AGCGAACGCATGTTCCTTAA+TGG | 0.273224 | 5.2:-39762006 | None:intergenic |
| TTCACTTCCAACTTCTCTTT+AGG | 0.284668 | 5.2:-39763397 | None:intergenic |
| TTGGAATTTAAGTACTCTTT+TGG | 0.290635 | 5.2:-39762480 | None:intergenic |
| ATCCTATACTTCAGTTCTTC+AGG | 0.310159 | 5.2:-39762438 | None:intergenic |
| CAAAGACAATAGAGGATAAC+TGG | 0.310479 | 5.2:+39764240 | MS.gene58973:CDS |
| TCCCATTATTTCATATATAC+TGG | 0.316971 | 5.2:+39760798 | MS.gene58973:CDS |
| TATTCAATGCCTTTATAATA+GGG | 0.323811 | 5.2:-39760872 | None:intergenic |
| CAACCCTCCTATTAGATCTA+AGG | 0.337822 | 5.2:+39759739 | MS.gene58973:CDS |
| ATAAAATTCGAGATAATTAC+AGG | 0.353684 | 5.2:-39762135 | None:intergenic |
| TTCTTCATTGTTACATCAGC+TGG | 0.355429 | 5.2:-39764215 | None:intergenic |
| ATAAACCTCCAGAGCTGTTC+CGG | 0.366121 | 5.2:-39759560 | None:intergenic |
| ATGAGGCAGGTTGGCATAGC+TGG | 0.369626 | 5.2:+39764188 | MS.gene58973:intron |
| TAAAACAAGAACATCATCTT+TGG | 0.382673 | 5.2:-39760937 | None:intergenic |
| ACATCATCTTTGGTGGAATT+GGG | 0.394799 | 5.2:-39760927 | None:intergenic |
| TGTGGGAGATGGATGGAGTA+TGG | 0.405885 | 5.2:+39763524 | MS.gene58973:CDS |
| TGTTCTAATTCAGGTTCATC+AGG | 0.406713 | 5.2:+39760758 | MS.gene58973:intron |
| CCTACATTCATAAGAAAGTC+TGG | 0.411811 | 5.2:-39763352 | None:intergenic |
| GAGTTGATTTCCAGTGAGAT+AGG | 0.412212 | 5.2:-39760829 | None:intergenic |
| GGATTCTGATGAAGATGAAT+GGG | 0.415064 | 5.2:+39762548 | MS.gene58973:CDS |
| TAGTGATATCCCTATTATAA+AGG | 0.415361 | 5.2:+39760863 | MS.gene58973:CDS |
| AGGGATATGGCAGAAATCTT+TGG | 0.418091 | 5.2:+39763278 | MS.gene58973:intron |
| AAACATTTGATCAAATCAAC+AGG | 0.419291 | 5.2:-39761978 | None:intergenic |
| GAGTTGTTGAGCTTGATATT+TGG | 0.429323 | 5.2:+39760904 | MS.gene58973:CDS |
| TACATTACCTTAGATCTAAT+AGG | 0.436253 | 5.2:-39759746 | None:intergenic |
| ACTACAAGCCACTGGTTGGC+TGG | 0.443070 | 5.2:+39763221 | MS.gene58973:CDS |
| ACATGACTCCGGAACAGCTC+TGG | 0.445811 | 5.2:+39759552 | None:intergenic |
| ACCAGTATATATGAAATAAT+GGG | 0.446982 | 5.2:-39760799 | None:intergenic |
| AAGAGTTATTATGACTGGAT+AGG | 0.447144 | 5.2:-39762036 | None:intergenic |
| GCTTCCTTCAAACTACCCTT+AGG | 0.448231 | 5.2:-39762970 | None:intergenic |
| CCAGACTTTCTTATGAATGT+AGG | 0.454137 | 5.2:+39763352 | MS.gene58973:CDS |
| ATTCAATCCTAAAGAGAAGT+TGG | 0.456474 | 5.2:+39763390 | MS.gene58973:CDS |
| CCTTCAAGCAAAAGCTGCTC+AGG | 0.456718 | 5.2:+39762079 | MS.gene58973:CDS |
| GAGAGAGGTTGATGATGAGA+AGG | 0.459589 | 5.2:+39759595 | MS.gene58973:CDS |
| AGGATTCTGATGAAGATGAA+TGG | 0.465159 | 5.2:+39762547 | MS.gene58973:CDS |
| TACACAAAATGAAGATGATA+AGG | 0.467374 | 5.2:+39762596 | MS.gene58973:CDS |
| AGGATAACTGGATACCTACT+TGG | 0.472804 | 5.2:+39764252 | MS.gene58973:CDS |
| CTTGAAGGTCTGAGGTAAGA+TGG | 0.476823 | 5.2:-39762064 | None:intergenic |
| GAGGTTGATGATGAGAAGGA+TGG | 0.479346 | 5.2:+39759599 | MS.gene58973:CDS |
| CGAGGTGACACGTGTACCCT+TGG | 0.479526 | 5.2:-39763194 | None:intergenic |
| CATCGAATGTTTAGATCCAA+TGG | 0.482284 | 5.2:+39763307 | MS.gene58973:CDS |
| GGAAGTGAAGAAGACTCTTA+AGG | 0.485765 | 5.2:+39763411 | MS.gene58973:CDS |
| GTGAATTCTTCTTCCCAAGT+AGG | 0.486822 | 5.2:-39764266 | None:intergenic |
| AGAGTTATTATGACTGGATA+GGG | 0.489103 | 5.2:-39762035 | None:intergenic |
| AAAACCTAAGGGTAGTTTGA+AGG | 0.497454 | 5.2:+39762966 | MS.gene58973:CDS |
| TCTTCAAGAGTTATTATGAC+TGG | 0.499791 | 5.2:-39762041 | None:intergenic |
| ATTATAAAGGCATTGAATAG+AGG | 0.500119 | 5.2:+39760876 | MS.gene58973:CDS |
| ATCGAATGTTTAGATCCAAT+GGG | 0.505076 | 5.2:+39763308 | MS.gene58973:CDS |
| TGGATAGGTTAAAATATATG+TGG | 0.514224 | 5.2:+39763506 | MS.gene58973:intron |
| CACCTGAAGAACTGAAGTAT+AGG | 0.517294 | 5.2:+39762436 | MS.gene58973:CDS |
| GAAGAAAACAAAGACAATAG+AGG | 0.517311 | 5.2:+39764232 | MS.gene58973:CDS |
| GTTCCACTTTACAATCGAAA+AGG | 0.517940 | 5.2:+39764419 | MS.gene58973:CDS |
| GTATCCTCTTCGAGAACTAA+AGG | 0.519491 | 5.2:+39762169 | MS.gene58973:CDS |
| AACAAGAACATCATCTTTGG+TGG | 0.520787 | 5.2:-39760934 | None:intergenic |
| GGTCATAACTCCTATCTCAC+TGG | 0.522887 | 5.2:+39760819 | MS.gene58973:CDS |
| TACTTCAGTTCTTCAGGTGA+CGG | 0.528094 | 5.2:-39762432 | None:intergenic |
| ATTACCTTAGATCTAATAGG+AGG | 0.531527 | 5.2:-39759743 | None:intergenic |
| TGAACTTGCTTTGCTTAGAG+TGG | 0.533590 | 5.2:+39764307 | MS.gene58973:CDS |
| GTTAAAATATATGTGGGAGA+TGG | 0.540418 | 5.2:+39763513 | MS.gene58973:CDS |
| ACTCTAAGCAAAGCAAGTTC+AGG | 0.549966 | 5.2:-39764305 | None:intergenic |
| GGTTGAATTCAGCAGAGAAA+AGG | 0.550704 | 5.2:-39759721 | None:intergenic |
| TGGAGGAAGTGCTGCAGAAG+CGG | 0.552240 | 5.2:+39759642 | MS.gene58973:CDS |
| AAATATATGTGGGAGATGGA+TGG | 0.558373 | 5.2:+39763517 | MS.gene58973:CDS |
| GAGGTGACACGTGTACCCTT+GGG | 0.560335 | 5.2:-39763193 | None:intergenic |
| CCAATCACTGAACTAAAACA+AGG | 0.561367 | 5.2:+39764386 | MS.gene58973:CDS |
| TGATACACAGAAGGTGGTGG+AGG | 0.563976 | 5.2:+39759625 | MS.gene58973:CDS |
| GTTGCTGAAATCAAAATCAA+AGG | 0.564989 | 5.2:+39762527 | MS.gene58973:CDS |
| TATCGTGGAGGTTCAGAGAG+AGG | 0.571463 | 5.2:+39759580 | MS.gene58973:CDS |
| TGATGAAGATGAATGGGGAA+AGG | 0.584071 | 5.2:+39762554 | MS.gene58973:CDS |
| GAATGTAGGTCCAAATAATG+AGG | 0.588015 | 5.2:+39763366 | MS.gene58973:CDS |
| CTCGTCGAACTACAAGCCAC+TGG | 0.588860 | 5.2:+39763213 | MS.gene58973:CDS |
| TGGTGGGGCCCACATGACTC+CGG | 0.590939 | 5.2:+39759541 | None:intergenic |
| CAATCACTGAACTAAAACAA+GGG | 0.591710 | 5.2:+39764387 | MS.gene58973:CDS |
| TTACCTTAGATCTAATAGGA+GGG | 0.601825 | 5.2:-39759742 | None:intergenic |
| TTCAGGCACAGTTAAAGGAA+AGG | 0.610669 | 5.2:-39764288 | None:intergenic |
| AATTGATACACAGAAGGTGG+TGG | 0.611302 | 5.2:+39759622 | MS.gene58973:CDS |
| TATATGAAATAATGGGACAA+TGG | 0.614028 | 5.2:-39760792 | None:intergenic |
| TGACTCCGGAACAGCTCTGG+AGG | 0.614053 | 5.2:+39759555 | MS.gene58973:CDS |
| GATTCTGATGAAGATGAATG+GGG | 0.619806 | 5.2:+39762549 | MS.gene58973:CDS |
| CCAAGCATCCAGCCAACCAG+TGG | 0.621623 | 5.2:-39763229 | None:intergenic |
| GGATAGGTTAAAATATATGT+GGG | 0.623354 | 5.2:+39763507 | MS.gene58973:intron |
| GGATAACTGGATACCTACTT+GGG | 0.627164 | 5.2:+39764253 | MS.gene58973:CDS |
| TGGAATTGATACACAGAAGG+TGG | 0.632697 | 5.2:+39759619 | MS.gene58973:CDS |
| TCGAACTACAAGCCACTGGT+TGG | 0.635611 | 5.2:+39763217 | MS.gene58973:CDS |
| GGATGGAATTGATACACAGA+AGG | 0.635682 | 5.2:+39759616 | MS.gene58973:CDS |
| CACGCCTTTAGTTCTCGAAG+AGG | 0.638865 | 5.2:-39762173 | None:intergenic |
| GCTCTGGAGGTTTATCGTGG+AGG | 0.645693 | 5.2:+39759568 | MS.gene58973:CDS |
| ACAGCTCTGGAGGTTTATCG+TGG | 0.661181 | 5.2:+39759565 | MS.gene58973:CDS |
| CAGTGGCTTGTAGTTCGACG+AGG | 0.682847 | 5.2:-39763212 | None:intergenic |
| TCGAATGTTTAGATCCAATG+GGG | 0.693138 | 5.2:+39763309 | MS.gene58973:CDS |
| CGAATGTTTAGATCCAATGG+GGG | 0.716144 | 5.2:+39763310 | MS.gene58973:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAATAATAAAAATT+TGG | - | chr5.2:39761124-39761143 | None:intergenic | 0.0% |
| !! | GTTTATAACTTATATAAAAA+CGG | - | chr5.2:39762691-39762710 | None:intergenic | 10.0% |
| !!! | TACAATTTGATTTTTTATAA+AGG | - | chr5.2:39761535-39761554 | None:intergenic | 10.0% |
| !!! | ATAAAACGTGTAAATTTTAT+AGG | + | chr5.2:39762243-39762262 | MS.gene58973:intron | 15.0% |
| !!! | TAAAACGTGTAAATTTTATA+GGG | + | chr5.2:39762244-39762263 | MS.gene58973:intron | 15.0% |
| !!! | TTGTTTAAATTTTCATCATT+TGG | - | chr5.2:39762408-39762427 | None:intergenic | 15.0% |
| !! | AAAATAAAGACTGTTTGAAT+TGG | - | chr5.2:39762813-39762832 | None:intergenic | 20.0% |
| !! | AATTCAAAGAAAAAGATTAC+TGG | - | chr5.2:39761870-39761889 | None:intergenic | 20.0% |
| !! | ACCAGTATATATGAAATAAT+GGG | - | chr5.2:39760802-39760821 | None:intergenic | 20.0% |
| !! | AGTAGATTATTTGTATACTT+AGG | - | chr5.2:39763074-39763093 | None:intergenic | 20.0% |
| !! | ATAAAATTCGAGATAATTAC+AGG | - | chr5.2:39762138-39762157 | None:intergenic | 20.0% |
| !! | ATTAACTTAACATCACTAAT+AGG | - | chr5.2:39760735-39760754 | None:intergenic | 20.0% |
| !! | ATTCTACATTCTAATTGTAA+TGG | + | chr5.2:39763120-39763139 | MS.gene58973:intron | 20.0% |
| !! | CAAACATATGCATTAAATTA+AGG | - | chr5.2:39760642-39760661 | None:intergenic | 20.0% |
| !! | TAGATGATTACTTAAACATT+TGG | + | chr5.2:39762366-39762385 | MS.gene58973:intron | 20.0% |
| !! | TATTCAATGCCTTTATAATA+GGG | - | chr5.2:39760875-39760894 | None:intergenic | 20.0% |
| !! | TTAGAATGTAGAATAGTTTA+AGG | - | chr5.2:39763114-39763133 | None:intergenic | 20.0% |
| !! | TTGAAGCTTAAATAACTTTA+AGG | + | chr5.2:39763703-39763722 | MS.gene58973:intron | 20.0% |
| !!! | AATCATTTGTTATATCTGAA+AGG | + | chr5.2:39762282-39762301 | MS.gene58973:intron | 20.0% |
| !!! | AGTTTTGAAGTTAATATGAA+TGG | + | chr5.2:39760491-39760510 | MS.gene58973:intron | 20.0% |
| !!! | ATTATGTTGTTTTGATTCAA+TGG | + | chr5.2:39759783-39759802 | MS.gene58973:intron | 20.0% |
| !!! | ATTATTGAATATTTTCTCTC+TGG | - | chr5.2:39759909-39759928 | None:intergenic | 20.0% |
| !!! | TGTATTTAATTTATTCTCAC+TGG | + | chr5.2:39763486-39763505 | MS.gene58973:intron | 20.0% |
| !!! | TTGGTATTTTTACTAGTTAT+TGG | + | chr5.2:39760583-39760602 | MS.gene58973:intron | 20.0% |
| !!! | TTTATCTTCTTCAACTTTTA+AGG | - | chr5.2:39762995-39763014 | None:intergenic | 20.0% |
| !!! | TTTCTTTCTATTTTCTTACA+GGG | + | chr5.2:39762832-39762851 | MS.gene58973:intron | 20.0% |
| !!! | TTTTCTTTCTATTTTCTTAC+AGG | + | chr5.2:39762831-39762850 | MS.gene58973:intron | 20.0% |
| ! | AAACATCTTATAACATGTTC+AGG | - | chr5.2:39762730-39762749 | None:intergenic | 25.0% |
| ! | AAACATTTGATCAAATCAAC+AGG | - | chr5.2:39761981-39762000 | None:intergenic | 25.0% |
| ! | AAAGTTATTTAAGCTTCAAG+TGG | - | chr5.2:39763702-39763721 | None:intergenic | 25.0% |
| ! | ACATTATCTTGTGAAAATAG+AGG | - | chr5.2:39762654-39762673 | None:intergenic | 25.0% |
| ! | AGGTCTATTTACAAGTTATT+TGG | + | chr5.2:39763793-39763812 | MS.gene58973:intron | 25.0% |
| ! | ATAAATTCACATGTAAGCTA+AGG | - | chr5.2:39764170-39764189 | None:intergenic | 25.0% |
| ! | CAAATTAAGTAAACTTGGAT+TGG | - | chr5.2:39760673-39760692 | None:intergenic | 25.0% |
| ! | CTATTCAATGCCTTTATAAT+AGG | - | chr5.2:39760876-39760895 | None:intergenic | 25.0% |
| ! | CTTTGAATTTACATATTTGC+TGG | + | chr5.2:39761881-39761900 | MS.gene58973:intron | 25.0% |
| ! | GACCAGTATATATGAAATAA+TGG | - | chr5.2:39760803-39760822 | None:intergenic | 25.0% |
| ! | GCAGTTATATTGTAAATCAA+AGG | - | chr5.2:39763632-39763651 | None:intergenic | 25.0% |
| ! | GGATAGGTTAAAATATATGT+GGG | + | chr5.2:39763507-39763526 | MS.gene58973:intron | 25.0% |
| ! | GTTAATTTCTGTTCTAATTC+AGG | + | chr5.2:39760749-39760768 | MS.gene58973:intron | 25.0% |
| ! | TAAAACAAGAACATCATCTT+TGG | - | chr5.2:39760940-39760959 | None:intergenic | 25.0% |
| ! | TAAATAGAAAAAACTTACCC+TGG | - | chr5.2:39763598-39763617 | None:intergenic | 25.0% |
| ! | TACACAAAATGAAGATGATA+AGG | + | chr5.2:39762596-39762615 | MS.gene58973:CDS | 25.0% |
| ! | TACATTACCTTAGATCTAAT+AGG | - | chr5.2:39759749-39759768 | None:intergenic | 25.0% |
| ! | TACTAGTTATTGGATGAAAA+AGG | + | chr5.2:39760593-39760612 | MS.gene58973:intron | 25.0% |
| ! | TAGAATAGTTTAAGGAAAAG+TGG | - | chr5.2:39763106-39763125 | None:intergenic | 25.0% |
| ! | TAGTGATATCCCTATTATAA+AGG | + | chr5.2:39760863-39760882 | MS.gene58973:CDS | 25.0% |
| ! | TCCCATTATTTCATATATAC+TGG | + | chr5.2:39760798-39760817 | MS.gene58973:CDS | 25.0% |
| ! | TGGATAGGTTAAAATATATG+TGG | + | chr5.2:39763506-39763525 | MS.gene58973:intron | 25.0% |
| ! | TTAATTTATTCTCACTGGAT+AGG | + | chr5.2:39763491-39763510 | MS.gene58973:intron | 25.0% |
| ! | TTCTGCAAATTAAGTAAACT+TGG | - | chr5.2:39760678-39760697 | None:intergenic | 25.0% |
| ! | TTGAAGTTAATATGAATGGA+AGG | + | chr5.2:39760495-39760514 | MS.gene58973:intron | 25.0% |
| !! | ATATCCTCAAAAAGTTTTTC+TGG | - | chr5.2:39763171-39763190 | None:intergenic | 25.0% |
| !! | ATTTTGTGTATGTACAACAT+CGG | - | chr5.2:39762586-39762605 | None:intergenic | 25.0% |
| !! | CAAATGTTTGAAATCCATTA+AGG | + | chr5.2:39761992-39762011 | MS.gene58973:CDS | 25.0% |
| !! | TATATGAAATAATGGGACAA+TGG | - | chr5.2:39760795-39760814 | None:intergenic | 25.0% |
| !! | TATCCTCAAAAAGTTTTTCT+GGG | - | chr5.2:39763170-39763189 | None:intergenic | 25.0% |
| !! | TGGTTTCTATTTTGTATGAT+AGG | + | chr5.2:39763140-39763159 | MS.gene58973:intron | 25.0% |
| !! | TTGGAATTTAAGTACTCTTT+TGG | - | chr5.2:39762483-39762502 | None:intergenic | 25.0% |
| !!! | AACAAAGTGTTTTCAAATAG+AGG | + | chr5.2:39760344-39760363 | MS.gene58973:intron | 25.0% |
| !!! | ACACTTTTAAGAAGTACATT+AGG | - | chr5.2:39760185-39760204 | None:intergenic | 25.0% |
| !!! | ATTATAAAGGCATTGAATAG+AGG | + | chr5.2:39760876-39760895 | MS.gene58973:CDS | 25.0% |
| !!! | CACTTTTAAGAAGTACATTA+GGG | - | chr5.2:39760184-39760203 | None:intergenic | 25.0% |
| !!! | CTTCAAAACTGCTTTAAAAA+GGG | - | chr5.2:39761273-39761292 | None:intergenic | 25.0% |
| !!! | TCTTCAAAACTGCTTTAAAA+AGG | - | chr5.2:39761274-39761293 | None:intergenic | 25.0% |
| !!! | TGAAAAAGGCAAGTTTTTTT+AGG | + | chr5.2:39760607-39760626 | MS.gene58973:intron | 25.0% |
| !!! | TTTCTAGAGTACATTTGTTA+AGG | + | chr5.2:39763773-39763792 | MS.gene58973:intron | 25.0% |
| AAACTGAACTGAACAATGAA+TGG | + | chr5.2:39761437-39761456 | MS.gene58973:intron | 30.0% | |
| AACAAATTTCTCTTCTGCTT+TGG | + | chr5.2:39761345-39761364 | MS.gene58973:intron | 30.0% | |
| AACTTGTAGAGACATAAAAG+TGG | + | chr5.2:39762205-39762224 | MS.gene58973:intron | 30.0% | |
| AAGAGTTATTATGACTGGAT+AGG | - | chr5.2:39762039-39762058 | None:intergenic | 30.0% | |
| AAGTTAATATGAATGGAAGG+TGG | + | chr5.2:39760498-39760517 | MS.gene58973:intron | 30.0% | |
| AATAGTTTAAGGAAAAGTGG+AGG | - | chr5.2:39763103-39763122 | None:intergenic | 30.0% | |
| AGAGTTATTATGACTGGATA+GGG | - | chr5.2:39762038-39762057 | None:intergenic | 30.0% | |
| AGCTTACATGTGAATTTATG+AGG | + | chr5.2:39764171-39764190 | MS.gene58973:intron | 30.0% | |
| AGTTAATATGAATGGAAGGT+GGG | + | chr5.2:39760499-39760518 | MS.gene58973:intron | 30.0% | |
| ATCGAATGTTTAGATCCAAT+GGG | + | chr5.2:39763308-39763327 | MS.gene58973:CDS | 30.0% | |
| ATTACCTTAGATCTAATAGG+AGG | - | chr5.2:39759746-39759765 | None:intergenic | 30.0% | |
| ATTCAATCCTAAAGAGAAGT+TGG | + | chr5.2:39763390-39763409 | MS.gene58973:CDS | 30.0% | |
| ATTCATGCTGAAAAACCTAA+GGG | + | chr5.2:39762955-39762974 | MS.gene58973:CDS | 30.0% | |
| CAATCACTGAACTAAAACAA+GGG | + | chr5.2:39764387-39764406 | MS.gene58973:CDS | 30.0% | |
| GAAGAAAACAAAGACAATAG+AGG | + | chr5.2:39764232-39764251 | MS.gene58973:CDS | 30.0% | |
| GGATTGAATACCTCATTATT+TGG | - | chr5.2:39763379-39763398 | None:intergenic | 30.0% | |
| GTTAAAATATATGTGGGAGA+TGG | + | chr5.2:39763513-39763532 | MS.gene58973:CDS | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | - | chr5.2:39761171-39761190 | None:intergenic | 30.0% | |
| GTTGCTGAAATCAAAATCAA+AGG | + | chr5.2:39762527-39762546 | MS.gene58973:CDS | 30.0% | |
| TATTCATGCTGAAAAACCTA+AGG | + | chr5.2:39762954-39762973 | MS.gene58973:CDS | 30.0% | |
| TCTTCAAGAGTTATTATGAC+TGG | - | chr5.2:39762044-39762063 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | + | chr5.2:39761175-39761194 | MS.gene58973:intron | 30.0% | |
| TTACCTTAGATCTAATAGGA+GGG | - | chr5.2:39759745-39759764 | None:intergenic | 30.0% | |
| TTCAAAACAGTGTTCTCAAT+CGG | - | chr5.2:39760434-39760453 | None:intergenic | 30.0% | |
| TTCAAATTTCACTTCACTAC+AGG | - | chr5.2:39760280-39760299 | None:intergenic | 30.0% | |
| TTCACAAAGGAAAAACAGTT+CGG | - | chr5.2:39761587-39761606 | None:intergenic | 30.0% | |
| ! | GAATTTAAGTACTCTTTTGG+AGG | - | chr5.2:39762480-39762499 | None:intergenic | 30.0% |
| ! | GATACGTAAACTTAGGTTTT+TGG | - | chr5.2:39763884-39763903 | None:intergenic | 30.0% |
| ! | GATCTTGTGTTTTCTTTGAT+TGG | + | chr5.2:39760564-39760583 | MS.gene58973:intron | 30.0% |
| ! | TTTTATAGAGGTCAATGAGT+TGG | + | chr5.2:39761143-39761162 | MS.gene58973:intron | 30.0% |
| ! | TTTTCGATTGTAAAGTGGAA+CGG | - | chr5.2:39764420-39764439 | None:intergenic | 30.0% |
| !! | CGATTTTGATACGTAAACTT+AGG | - | chr5.2:39763891-39763910 | None:intergenic | 30.0% |
| !! | TATTGCGCAATAACTGATTT+TGG | + | chr5.2:39761646-39761665 | MS.gene58973:intron | 30.0% |
| !! | TGATTCAATGGTTTGACTTT+TGG | + | chr5.2:39759795-39759814 | MS.gene58973:intron | 30.0% |
| !! | TTTTTGAGGATATATCCCAA+GGG | + | chr5.2:39763178-39763197 | MS.gene58973:CDS | 30.0% |
| !!! | AATTAGTTTTCTGTGTATCG+TGG | - | chr5.2:39760318-39760337 | None:intergenic | 30.0% |
| !!! | ATGTTCTTGTTTTACATGGA+AGG | + | chr5.2:39760946-39760965 | MS.gene58973:CDS | 30.0% |
| !!! | CAATTTGGTTTTGTTCAGTT+CGG | - | chr5.2:39761707-39761726 | None:intergenic | 30.0% |
| !!! | CTCAGGTTCACAATTTTTTT+TGG | + | chr5.2:39762314-39762333 | MS.gene58973:intron | 30.0% |
| !!! | GATGATGTTCTTGTTTTACA+TGG | + | chr5.2:39760942-39760961 | MS.gene58973:CDS | 30.0% |
| !!! | TCTTTGTTTTCAAACAGAAC+TGG | + | chr5.2:39761504-39761523 | MS.gene58973:intron | 30.0% |
| AAAAAGATTACTGGCACAGT+AGG | - | chr5.2:39761861-39761880 | None:intergenic | 35.0% | |
| AAAACCTAAGGGTAGTTTGA+AGG | + | chr5.2:39762966-39762985 | MS.gene58973:CDS | 35.0% | |
| AAATATATGTGGGAGATGGA+TGG | + | chr5.2:39763517-39763536 | MS.gene58973:CDS | 35.0% | |
| AACAAGAACATCATCTTTGG+TGG | - | chr5.2:39760937-39760956 | None:intergenic | 35.0% | |
| AACAGAACCGTTAAACTGAA+TGG | - | chr5.2:39761818-39761837 | None:intergenic | 35.0% | |
| AACAGTTTAACCACTTCCTT+TGG | + | chr5.2:39764034-39764053 | MS.gene58973:intron | 35.0% | |
| AACATCATCTTTGGTGGAAT+TGG | - | chr5.2:39760931-39760950 | None:intergenic | 35.0% | |
| AATGGTTGCATTCAATATGC+AGG | + | chr5.2:39763258-39763277 | MS.gene58973:intron | 35.0% | |
| ACATCATCTTTGGTGGAATT+GGG | - | chr5.2:39760930-39760949 | None:intergenic | 35.0% | |
| ACTACCATGAACTTCTACTT+AGG | - | chr5.2:39759979-39759998 | None:intergenic | 35.0% | |
| AGACTGTTTGAAAGAGCTTT+CGG | - | chr5.2:39762753-39762772 | None:intergenic | 35.0% | |
| AGGATTCATCATAACCAATC+GGG | + | chr5.2:39763938-39763957 | MS.gene58973:intron | 35.0% | |
| AGGATTCTGATGAAGATGAA+TGG | + | chr5.2:39762547-39762566 | MS.gene58973:CDS | 35.0% | |
| ATCCTATACTTCAGTTCTTC+AGG | - | chr5.2:39762441-39762460 | None:intergenic | 35.0% | |
| ATGGTTGCATTCAATATGCA+GGG | + | chr5.2:39763259-39763278 | MS.gene58973:intron | 35.0% | |
| CAAAGACAATAGAGGATAAC+TGG | + | chr5.2:39764240-39764259 | MS.gene58973:CDS | 35.0% | |
| CACGAGTGACATTTCAAAAA+AGG | + | chr5.2:39760466-39760485 | MS.gene58973:intron | 35.0% | |
| CAGGATTCATCATAACCAAT+CGG | + | chr5.2:39763937-39763956 | MS.gene58973:intron | 35.0% | |
| CATCGAATGTTTAGATCCAA+TGG | + | chr5.2:39763307-39763326 | MS.gene58973:CDS | 35.0% | |
| CCAATCACTGAACTAAAACA+AGG | + | chr5.2:39764386-39764405 | MS.gene58973:CDS | 35.0% | |
| CCAGACTTTCTTATGAATGT+AGG | + | chr5.2:39763352-39763371 | MS.gene58973:CDS | 35.0% | |
| CCTACATTCATAAGAAAGTC+TGG | - | chr5.2:39763355-39763374 | None:intergenic | 35.0% | |
| CGTATCAAAATCGAGTTAAC+AGG | + | chr5.2:39763898-39763917 | MS.gene58973:intron | 35.0% | |
| CTGATCAACACATTGCAAAA+TGG | + | chr5.2:39760983-39761002 | MS.gene58973:intron | 35.0% | |
| CTGCTCAGGTAATTTCTTAT+AGG | + | chr5.2:39762093-39762112 | MS.gene58973:CDS | 35.0% | |
| GAATGTAGGTCCAAATAATG+AGG | + | chr5.2:39763366-39763385 | MS.gene58973:CDS | 35.0% | |
| GAGTTGTTGAGCTTGATATT+TGG | + | chr5.2:39760904-39760923 | MS.gene58973:CDS | 35.0% | |
| GATTCTGATGAAGATGAATG+GGG | + | chr5.2:39762549-39762568 | MS.gene58973:CDS | 35.0% | |
| GGATTCTGATGAAGATGAAT+GGG | + | chr5.2:39762548-39762567 | MS.gene58973:CDS | 35.0% | |
| GTTCAATTCAGTCCATGAAT+TGG | - | chr5.2:39761735-39761754 | None:intergenic | 35.0% | |
| GTTCCACTTTACAATCGAAA+AGG | + | chr5.2:39764419-39764438 | MS.gene58973:CDS | 35.0% | |
| TACATGTGAATTTATGAGGC+AGG | + | chr5.2:39764175-39764194 | MS.gene58973:intron | 35.0% | |
| TCAAAACAGTGTTCTCAATC+GGG | - | chr5.2:39760433-39760452 | None:intergenic | 35.0% | |
| TCGAATGTTTAGATCCAATG+GGG | + | chr5.2:39763309-39763328 | MS.gene58973:CDS | 35.0% | |
| TCTTCAAAACTATCTTCACC+TGG | - | chr5.2:39760538-39760557 | None:intergenic | 35.0% | |
| TCTTCCTAAGTAGAAGTTCA+TGG | + | chr5.2:39759972-39759991 | MS.gene58973:intron | 35.0% | |
| TTCACTTCCAACTTCTCTTT+AGG | - | chr5.2:39763400-39763419 | None:intergenic | 35.0% | |
| TTCTTCATTGTTACATCAGC+TGG | - | chr5.2:39764218-39764237 | None:intergenic | 35.0% | |
| TTGAAGAAGATAAAGTGAGC+CGG | + | chr5.2:39763001-39763020 | MS.gene58973:intron | 35.0% | |
| TTTATAGTAGTGCAACGTAG+CGG | + | chr5.2:39760377-39760396 | MS.gene58973:intron | 35.0% | |
| ! | AAAAGGTGCAAGATTCACAA+AGG | - | chr5.2:39761600-39761619 | None:intergenic | 35.0% |
| ! | AATTTCCCTTTTTGTCCCTT+CGG | + | chr5.2:39761015-39761034 | MS.gene58973:intron | 35.0% |
| ! | AGAATTCTCTCTCACACTTT+TGG | - | chr5.2:39762502-39762521 | None:intergenic | 35.0% |
| ! | ATCTCATTTTGAATCCCGAT+TGG | - | chr5.2:39763955-39763974 | None:intergenic | 35.0% |
| ! | ATGTCATTGTCCTTGCTATA+AGG | + | chr5.2:39760148-39760167 | MS.gene58973:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr5.2:39761155-39761174 | MS.gene58973:intron | 35.0% |
| ! | TATGTTTCTGTCTCAAGTGT+TGG | + | chr5.2:39759832-39759851 | MS.gene58973:intron | 35.0% |
| ! | TCACCCAGAAAAACTTTTTG+AGG | + | chr5.2:39763164-39763183 | MS.gene58973:intron | 35.0% |
| ! | TCTCCTTTTCGATTGTAAAG+TGG | - | chr5.2:39764425-39764444 | None:intergenic | 35.0% |
| ! | TGTTCTAATTCAGGTTCATC+AGG | + | chr5.2:39760758-39760777 | MS.gene58973:intron | 35.0% |
| !! | CTATTTCTGTAATCGTCCAA+AGG | - | chr5.2:39764053-39764072 | None:intergenic | 35.0% |
| !! | CTTTTTGAGGATATATCCCA+AGG | + | chr5.2:39763177-39763196 | MS.gene58973:CDS | 35.0% |
| !! | GTCTCAAGTGTTGGATTAAT+TGG | + | chr5.2:39759866-39759885 | MS.gene58973:intron | 35.0% |
| !! | GTTTTAGCGAACAGTTTTAG+TGG | - | chr5.2:39761421-39761440 | None:intergenic | 35.0% |
| !!! | CCTTGTTTTAGTTCAGTGAT+TGG | - | chr5.2:39764389-39764408 | None:intergenic | 35.0% |
| AATTGATACACAGAAGGTGG+TGG | + | chr5.2:39759622-39759641 | MS.gene58973:CDS | 40.0% | |
| ACTCTAAGCAAAGCAAGTTC+AGG | - | chr5.2:39764308-39764327 | None:intergenic | 40.0% | |
| AGCAAAGAACCGAACTATGA+CGG | - | chr5.2:39761787-39761806 | None:intergenic | 40.0% | |
| AGGATAACTGGATACCTACT+TGG | + | chr5.2:39764252-39764271 | MS.gene58973:CDS | 40.0% | |
| AGGGATATGGCAGAAATCTT+TGG | + | chr5.2:39763278-39763297 | MS.gene58973:intron | 40.0% | |
| ATGGAAGTGGTATATGGGTT+TGG | + | chr5.2:39761472-39761491 | MS.gene58973:intron | 40.0% | |
| CAAAACAGTGTTCTCAATCG+GGG | - | chr5.2:39760432-39760451 | None:intergenic | 40.0% | |
| CAAATTGTGACGCCAATTCA+TGG | + | chr5.2:39761720-39761739 | MS.gene58973:intron | 40.0% | |
| CAACCCTCCTATTAGATCTA+AGG | + | chr5.2:39759739-39759758 | MS.gene58973:CDS | 40.0% | |
| CACCTGAAGAACTGAAGTAT+AGG | + | chr5.2:39762436-39762455 | MS.gene58973:CDS | 40.0% | |
| CATGAATTGGCGTCACAATT+TGG | - | chr5.2:39761722-39761741 | None:intergenic | 40.0% | |
| CCAGAATGGAAGTGGTATAT+GGG | + | chr5.2:39761467-39761486 | MS.gene58973:intron | 40.0% | |
| CGAATGTTTAGATCCAATGG+GGG | + | chr5.2:39763310-39763329 | MS.gene58973:CDS | 40.0% | |
| CGATACAGAGAAGATTAGCA+TGG | + | chr5.2:39761059-39761078 | MS.gene58973:intron | 40.0% | |
| CGGTACACAAAGATACAGTT+CGG | - | chr5.2:39761567-39761586 | None:intergenic | 40.0% | |
| CGTAATTGTCCGTCATAGTT+CGG | + | chr5.2:39761775-39761794 | MS.gene58973:intron | 40.0% | |
| CTTACCCTGGCATAAAAATC+TGG | - | chr5.2:39763585-39763604 | None:intergenic | 40.0% | |
| GAACTTCTACTTAGGAAGAG+TGG | - | chr5.2:39759971-39759990 | None:intergenic | 40.0% | |
| GCATTCAATATGCAGGGATA+TGG | + | chr5.2:39763265-39763284 | MS.gene58973:intron | 40.0% | |
| GGAAGTGAAGAAGACTCTTA+AGG | + | chr5.2:39763411-39763430 | MS.gene58973:CDS | 40.0% | |
| GGATAACTGGATACCTACTT+GGG | + | chr5.2:39764253-39764272 | MS.gene58973:CDS | 40.0% | |
| GGATGGAATTGATACACAGA+AGG | + | chr5.2:39759616-39759635 | MS.gene58973:CDS | 40.0% | |
| GGTTGAATTCAGCAGAGAAA+AGG | - | chr5.2:39759724-39759743 | None:intergenic | 40.0% | |
| GTATCCTCTTCGAGAACTAA+AGG | + | chr5.2:39762169-39762188 | MS.gene58973:CDS | 40.0% | |
| GTGAATTCTTCTTCCCAAGT+AGG | - | chr5.2:39764269-39764288 | None:intergenic | 40.0% | |
| TACTTCAGTTCTTCAGGTGA+CGG | - | chr5.2:39762435-39762454 | None:intergenic | 40.0% | |
| TAGTTCGGTTCTTTGCTTTG+CGG | + | chr5.2:39761790-39761809 | MS.gene58973:intron | 40.0% | |
| TCCAGAATGGAAGTGGTATA+TGG | + | chr5.2:39761466-39761485 | MS.gene58973:intron | 40.0% | |
| TCGGGGACATCTGATAAAAT+TGG | + | chr5.2:39761034-39761053 | MS.gene58973:intron | 40.0% | |
| TGAACTTGTCCAGTTCGAAA+AGG | - | chr5.2:39761617-39761636 | None:intergenic | 40.0% | |
| TGAAGAAGACTCTTAAGGTG+AGG | + | chr5.2:39763416-39763435 | MS.gene58973:intron | 40.0% | |
| TGAATGGTATACGTCCAGAA+TGG | + | chr5.2:39761453-39761472 | MS.gene58973:intron | 40.0% | |
| TGATGAAGATGAATGGGGAA+AGG | + | chr5.2:39762554-39762573 | MS.gene58973:CDS | 40.0% | |
| TGGAATTGATACACAGAAGG+TGG | + | chr5.2:39759619-39759638 | MS.gene58973:CDS | 40.0% | |
| TGTCAATGTCCTACATTCAC+AGG | - | chr5.2:39761955-39761974 | None:intergenic | 40.0% | |
| TGTGAATTTATGAGGCAGGT+TGG | + | chr5.2:39764179-39764198 | MS.gene58973:intron | 40.0% | |
| TTCAGGCACAGTTAAAGGAA+AGG | - | chr5.2:39764291-39764310 | None:intergenic | 40.0% | |
| TTCGTAAACCGAACCATGAA+CGG | - | chr5.2:39761372-39761391 | None:intergenic | 40.0% | |
| TTTCGAACTGGACAAGTTCA+AGG | + | chr5.2:39761617-39761636 | MS.gene58973:intron | 40.0% | |
| ! | AATCTTGCACCTTTTCGAAC+TGG | + | chr5.2:39761605-39761624 | MS.gene58973:intron | 40.0% |
| ! | ATTTCCCTTTTTGTCCCTTC+GGG | + | chr5.2:39761016-39761035 | MS.gene58973:intron | 40.0% |
| ! | ATTTTATCAGATGTCCCCGA+AGG | - | chr5.2:39761034-39761053 | None:intergenic | 40.0% |
| ! | CTGAAAGGTGTAAATCACTC+AGG | + | chr5.2:39762297-39762316 | MS.gene58973:intron | 40.0% |
| ! | GAGTTGATTTCCAGTGAGAT+AGG | - | chr5.2:39760832-39760851 | None:intergenic | 40.0% |
| ! | TCCACCAGATTTTTATGCCA+GGG | + | chr5.2:39763578-39763597 | MS.gene58973:CDS | 40.0% |
| ! | TGAACTTGCTTTGCTTAGAG+TGG | + | chr5.2:39764307-39764326 | MS.gene58973:CDS | 40.0% |
| ! | TTGTGTTGACCTGTGAATGT+AGG | + | chr5.2:39761943-39761962 | MS.gene58973:intron | 40.0% |
| ! | TTTTATCAGATGTCCCCGAA+GGG | - | chr5.2:39761033-39761052 | None:intergenic | 40.0% |
| !! | TCTGAGACAGATGATTTTGC+AGG | + | chr5.2:39764350-39764369 | MS.gene58973:CDS | 40.0% |
| ACCCTGGCATAAAAATCTGG+TGG | - | chr5.2:39763582-39763601 | None:intergenic | 45.0% | |
| AGCGAACGCATGTTCCTTAA+TGG | - | chr5.2:39762009-39762028 | None:intergenic | 45.0% | |
| ATAAACCTCCAGAGCTGTTC+CGG | - | chr5.2:39759563-39759582 | None:intergenic | 45.0% | |
| CCCATATACCACTTCCATTC+TGG | - | chr5.2:39761470-39761489 | None:intergenic | 45.0% | |
| CTGTAATCGTCCAAAGGAAG+TGG | - | chr5.2:39764047-39764066 | None:intergenic | 45.0% | |
| GACACGCACAAATCGAGAAA+TGG | + | chr5.2:39761097-39761116 | MS.gene58973:intron | 45.0% | |
| GCAAGTTCAGGCACAGTTAA+AGG | - | chr5.2:39764296-39764315 | None:intergenic | 45.0% | |
| GCTTCCTTCAAACTACCCTT+AGG | - | chr5.2:39762973-39762992 | None:intergenic | 45.0% | |
| GGTCATAACTCCTATCTCAC+TGG | + | chr5.2:39760819-39760838 | MS.gene58973:CDS | 45.0% | |
| GTATACGTCCAGAATGGAAG+TGG | + | chr5.2:39761459-39761478 | MS.gene58973:intron | 45.0% | |
| GTTGACCCAATCAACTGAGT+CGG | + | chr5.2:39760027-39760046 | MS.gene58973:intron | 45.0% | |
| TGCGGCTCCATTCAGTTTAA+CGG | + | chr5.2:39761808-39761827 | MS.gene58973:intron | 45.0% | |
| TTTAGATCCAATGGGGGATG+TGG | + | chr5.2:39763316-39763335 | MS.gene58973:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.2:39761224-39761243 | None:intergenic | 45.0% |
| ! | AGCATGTGTTGACCATTGAC+CGG | + | chr5.2:39760242-39760261 | MS.gene58973:intron | 45.0% |
| ! | AGCTTTTGCTTGAAGGTCTG+AGG | - | chr5.2:39762075-39762094 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.2:39761225-39761244 | None:intergenic | 45.0% |
| ! | CCAAACCGACTCAGTTGATT+GGG | - | chr5.2:39760035-39760054 | None:intergenic | 45.0% |
| ! | CTCCACCAGATTTTTATGCC+AGG | + | chr5.2:39763577-39763596 | MS.gene58973:CDS | 45.0% |
| ! | CTTGAAGGTCTGAGGTAAGA+TGG | - | chr5.2:39762067-39762086 | None:intergenic | 45.0% |
| ! | TTTCCCTTTTTGTCCCTTCG+GGG | + | chr5.2:39761017-39761036 | MS.gene58973:intron | 45.0% |
| !! | GAAGCACTGAGGGTTTGTTT+AGG | - | chr5.2:39764144-39764163 | None:intergenic | 45.0% |
| !! | GAGAGAGGTTGATGATGAGA+AGG | + | chr5.2:39759595-39759614 | MS.gene58973:CDS | 45.0% |
| !! | GAGGTTGATGATGAGAAGGA+TGG | + | chr5.2:39759599-39759618 | MS.gene58973:CDS | 45.0% |
| !! | GGTATATGGGTTTGGTGCAT+TGG | + | chr5.2:39761480-39761499 | MS.gene58973:intron | 45.0% |
| !! | GTTCATGGTTCGGTTTACGA+AGG | + | chr5.2:39761371-39761390 | MS.gene58973:intron | 45.0% |
| !!! | ATTATTTTTTTATTTTATAG+AGG | + | chr5.2:39761131-39761150 | MS.gene58973:intron | 5.0% |
| AGGACTCATCACTGTGAGTC+AGG | + | chr5.2:39763918-39763937 | MS.gene58973:intron | 50.0% | |
| ATGTCCCCGAAGGGACAAAA+AGG | - | chr5.2:39761024-39761043 | None:intergenic | 50.0% | |
| CACATAACCACATCCCCCAT+TGG | - | chr5.2:39763326-39763345 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr5.2:39761223-39761242 | MS.gene58973:intron | 50.0% | |
| CCCAATCAACTGAGTCGGTT+TGG | + | chr5.2:39760032-39760051 | MS.gene58973:intron | 50.0% | |
| CCTTCAAGCAAAAGCTGCTC+AGG | + | chr5.2:39762079-39762098 | MS.gene58973:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr5.2:39761220-39761239 | None:intergenic | 50.0% | |
| GTGGGATTGAACAATGCACC+AGG | + | chr5.2:39760517-39760536 | MS.gene58973:intron | 50.0% | |
| TATCGTGGAGGTTCAGAGAG+AGG | + | chr5.2:39759580-39759599 | MS.gene58973:CDS | 50.0% | |
| TCCTCGACGTCCTTATAGCA+AGG | - | chr5.2:39760161-39760180 | None:intergenic | 50.0% | |
| TCGAACTACAAGCCACTGGT+TGG | + | chr5.2:39763217-39763236 | MS.gene58973:CDS | 50.0% | |
| TGTCCCCGAAGGGACAAAAA+GGG | - | chr5.2:39761023-39761042 | None:intergenic | 50.0% | |
| TGTGGGAGATGGATGGAGTA+TGG | + | chr5.2:39763524-39763543 | MS.gene58973:CDS | 50.0% | |
| TGTTGACCATTGACCGGTAG+TGG | + | chr5.2:39760248-39760267 | MS.gene58973:intron | 50.0% | |
| TTGGGTCAACGTCTCAGACA+AGG | - | chr5.2:39760017-39760036 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr5.2:39761226-39761245 | None:intergenic | 50.0% |
| ! | CCTGAGCAGCTTTTGCTTGA+AGG | - | chr5.2:39762082-39762101 | None:intergenic | 50.0% |
| ! | CTTCTGCTTTGGACCGTTCA+TGG | + | chr5.2:39761356-39761375 | MS.gene58973:intron | 50.0% |
| ! | GCCAAACCGACTCAGTTGAT+TGG | - | chr5.2:39760036-39760055 | None:intergenic | 50.0% |
| ! | GCTTTGGACCGTTCATGGTT+CGG | + | chr5.2:39761361-39761380 | MS.gene58973:intron | 50.0% |
| ! | TCCTTGCTATAAGGACGTCG+AGG | + | chr5.2:39760157-39760176 | MS.gene58973:intron | 50.0% |
| ! | TGATACACAGAAGGTGGTGG+AGG | + | chr5.2:39759625-39759644 | MS.gene58973:CDS | 50.0% |
| !! | ACAGCTCTGGAGGTTTATCG+TGG | + | chr5.2:39759565-39759584 | MS.gene58973:CDS | 50.0% |
| !! | AGCTAAGGCAAGAAGCACTG+AGG | - | chr5.2:39764155-39764174 | None:intergenic | 50.0% |
| !! | CACGCCTTTAGTTCTCGAAG+AGG | - | chr5.2:39762176-39762195 | None:intergenic | 50.0% |
| !! | CTGGATGCTTGGTGCTCAAA+TGG | + | chr5.2:39763240-39763259 | MS.gene58973:intron | 50.0% |
| !! | GCTAAGGCAAGAAGCACTGA+GGG | - | chr5.2:39764154-39764173 | None:intergenic | 50.0% |
| ACTAAGTGGGGTCGGCTACA+GGG | - | chr5.2:39761212-39761231 | None:intergenic | 55.0% | |
| CCTAGTGTCAGCTCAGTAGC+CGG | - | chr5.2:39763023-39763042 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr5.2:39761218-39761237 | MS.gene58973:intron | 55.0% | |
| CTACAGCCACTACCGGTCAA+TGG | - | chr5.2:39760257-39760276 | None:intergenic | 55.0% | |
| CTACAGGCTACAGCCACTAC+CGG | - | chr5.2:39760264-39760283 | None:intergenic | 55.0% | |
| CTCGTCGAACTACAAGCCAC+TGG | + | chr5.2:39763213-39763232 | MS.gene58973:CDS | 55.0% | |
| GAGGTGACACGTGTACCCTT+GGG | - | chr5.2:39763196-39763215 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr5.2:39761212-39761231 | MS.gene58973:intron | 55.0% | |
| ! | ACTACAAGCCACTGGTTGGC+TGG | + | chr5.2:39763221-39763240 | MS.gene58973:CDS | 55.0% |
| ! | ATGAGGCAGGTTGGCATAGC+TGG | + | chr5.2:39764188-39764207 | MS.gene58973:intron | 55.0% |
| ! | CAGTGGCTTGTAGTTCGACG+AGG | - | chr5.2:39763215-39763234 | None:intergenic | 55.0% |
| !! | GCTCTGGAGGTTTATCGTGG+AGG | + | chr5.2:39759568-39759587 | MS.gene58973:CDS | 55.0% |
| !! | TGGAGGAAGTGCTGCAGAAG+CGG | + | chr5.2:39759642-39759661 | MS.gene58973:CDS | 55.0% |
| ATTAGCATGGCCCCTGCGCA+AGG | + | chr5.2:39761072-39761091 | MS.gene58973:intron | 60.0% | |
| CACTAAGTGGGGTCGGCTAC+AGG | - | chr5.2:39761213-39761232 | None:intergenic | 60.0% | |
| CCAAGCATCCAGCCAACCAG+TGG | - | chr5.2:39763232-39763251 | None:intergenic | 60.0% | |
| CCGGCTACTGAGCTGACACT+AGG | + | chr5.2:39763020-39763039 | MS.gene58973:intron | 60.0% | |
| CGAGGTGACACGTGTACCCT+TGG | - | chr5.2:39763197-39763216 | None:intergenic | 60.0% | |
| CTGTAGCCGACCCCACTTAG+TGG | + | chr5.2:39761211-39761230 | MS.gene58973:intron | 60.0% | |
| GTGCGTGTCATCCTTGCGCA+GGG | - | chr5.2:39761086-39761105 | None:intergenic | 60.0% | |
| TGCGTGTCATCCTTGCGCAG+GGG | - | chr5.2:39761085-39761104 | None:intergenic | 60.0% | |
| TGTGCGTGTCATCCTTGCGC+AGG | - | chr5.2:39761087-39761106 | None:intergenic | 60.0% | |
| ! | CCACTGGTTGGCTGGATGCT+TGG | + | chr5.2:39763229-39763248 | MS.gene58973:intron | 60.0% |
| ! | TGACTCCGGAACAGCTCTGG+AGG | + | chr5.2:39759555-39759574 | MS.gene58973:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 39759554 | 39764447 | 39759554 | ID=MS.gene58973 |
| chr5.2 | mRNA | 39759554 | 39764447 | 39759554 | ID=MS.gene58973.t1;Parent=MS.gene58973 |
| chr5.2 | exon | 39759554 | 39759760 | 39759554 | ID=MS.gene58973.t1.exon1;Parent=MS.gene58973.t1 |
| chr5.2 | CDS | 39759554 | 39759760 | 39759554 | ID=cds.MS.gene58973.t1;Parent=MS.gene58973.t1 |
| chr5.2 | exon | 39760771 | 39760967 | 39760771 | ID=MS.gene58973.t1.exon2;Parent=MS.gene58973.t1 |
| chr5.2 | CDS | 39760771 | 39760967 | 39760771 | ID=cds.MS.gene58973.t1;Parent=MS.gene58973.t1 |
| chr5.2 | exon | 39761965 | 39762197 | 39761965 | ID=MS.gene58973.t1.exon3;Parent=MS.gene58973.t1 |
| chr5.2 | CDS | 39761965 | 39762197 | 39761965 | ID=cds.MS.gene58973.t1;Parent=MS.gene58973.t1 |
| chr5.2 | exon | 39762391 | 39762617 | 39762391 | ID=MS.gene58973.t1.exon4;Parent=MS.gene58973.t1 |
| chr5.2 | CDS | 39762391 | 39762617 | 39762391 | ID=cds.MS.gene58973.t1;Parent=MS.gene58973.t1 |
| chr5.2 | exon | 39762853 | 39763014 | 39762853 | ID=MS.gene58973.t1.exon5;Parent=MS.gene58973.t1 |
| chr5.2 | CDS | 39762853 | 39763014 | 39762853 | ID=cds.MS.gene58973.t1;Parent=MS.gene58973.t1 |
| chr5.2 | exon | 39763172 | 39763245 | 39763172 | ID=MS.gene58973.t1.exon6;Parent=MS.gene58973.t1 |
| chr5.2 | CDS | 39763172 | 39763245 | 39763172 | ID=cds.MS.gene58973.t1;Parent=MS.gene58973.t1 |
| chr5.2 | exon | 39763291 | 39763432 | 39763291 | ID=MS.gene58973.t1.exon7;Parent=MS.gene58973.t1 |
| chr5.2 | CDS | 39763291 | 39763432 | 39763291 | ID=cds.MS.gene58973.t1;Parent=MS.gene58973.t1 |
| chr5.2 | exon | 39763513 | 39763599 | 39763513 | ID=MS.gene58973.t1.exon8;Parent=MS.gene58973.t1 |
| chr5.2 | CDS | 39763513 | 39763599 | 39763513 | ID=cds.MS.gene58973.t1;Parent=MS.gene58973.t1 |
| chr5.2 | exon | 39764197 | 39764447 | 39764197 | ID=MS.gene58973.t1.exon9;Parent=MS.gene58973.t1 |
| chr5.2 | CDS | 39764197 | 39764447 | 39764197 | ID=cds.MS.gene58973.t1;Parent=MS.gene58973.t1 |
| Gene Sequence |
| Protein sequence |
