Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59234.t1 | XP_003616489.2 | 92.9 | 435 | 28 | 3 | 1 | 434 | 1 | 433 | 5.70E-230 | 806.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59234.t1 | Q6XBF8 | 51.4 | 432 | 203 | 6 | 6 | 434 | 9 | 436 | 3.5e-119 | 429.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59234.t1 | G7K1Z4 | 92.9 | 435 | 28 | 3 | 1 | 434 | 1 | 433 | 4.1e-230 | 806.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene59234 | MS.gene049227 | PPI |
MS.gene59234 | MS.gene013256 | PPI |
MS.gene59234 | MS.gene40949 | PPI |
MS.gene59234 | MS.gene06341 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59234.t1 | MTR_5g080890 | 92.661 | 436 | 29 | 3 | 1 | 435 | 1 | 434 | 0.0 | 820 |
MS.gene59234.t1 | MTR_5g080960 | 92.661 | 436 | 29 | 3 | 1 | 435 | 1 | 434 | 0.0 | 820 |
MS.gene59234.t1 | MTR_8g096990 | 75.862 | 435 | 102 | 2 | 1 | 435 | 1 | 432 | 0.0 | 679 |
MS.gene59234.t1 | MTR_8g038280 | 71.461 | 438 | 120 | 2 | 1 | 435 | 1 | 436 | 0.0 | 636 |
MS.gene59234.t1 | MTR_5g044770 | 71.954 | 435 | 118 | 3 | 1 | 435 | 1 | 431 | 0.0 | 633 |
MS.gene59234.t1 | MTR_8g038250 | 70.843 | 439 | 101 | 3 | 1 | 435 | 1 | 416 | 0.0 | 619 |
MS.gene59234.t1 | MTR_6g090290 | 68.721 | 438 | 131 | 3 | 1 | 434 | 1 | 436 | 0.0 | 602 |
MS.gene59234.t1 | MTR_4g109760 | 68.966 | 435 | 99 | 4 | 1 | 435 | 1 | 399 | 0.0 | 555 |
MS.gene59234.t1 | MTR_8g038310 | 61.609 | 435 | 144 | 4 | 1 | 434 | 1 | 413 | 0.0 | 543 |
MS.gene59234.t1 | MTR_3g028120 | 54.197 | 417 | 182 | 6 | 25 | 434 | 24 | 438 | 1.43e-151 | 437 |
MS.gene59234.t1 | MTR_5g038360 | 51.598 | 438 | 199 | 8 | 5 | 435 | 6 | 437 | 1.33e-147 | 427 |
MS.gene59234.t1 | MTR_2g067830 | 54.390 | 410 | 176 | 8 | 32 | 434 | 1 | 406 | 1.77e-142 | 413 |
MS.gene59234.t1 | MTR_6g088760 | 54.187 | 406 | 176 | 7 | 1 | 398 | 1 | 404 | 1.06e-141 | 415 |
MS.gene59234.t1 | MTR_0024s0040 | 53.012 | 415 | 180 | 9 | 30 | 434 | 1 | 410 | 6.65e-134 | 391 |
MS.gene59234.t1 | MTR_5g044570 | 48.643 | 442 | 188 | 11 | 1 | 434 | 1 | 411 | 5.24e-131 | 384 |
MS.gene59234.t1 | MTR_2g105300 | 51.351 | 407 | 165 | 9 | 32 | 431 | 1 | 381 | 2.68e-130 | 381 |
MS.gene59234.t1 | MTR_0036s0070 | 42.529 | 435 | 225 | 12 | 11 | 435 | 8 | 427 | 9.37e-109 | 328 |
MS.gene59234.t1 | MTR_0036s0050 | 42.597 | 439 | 226 | 12 | 11 | 434 | 8 | 435 | 1.72e-106 | 322 |
MS.gene59234.t1 | MTR_0036s0110 | 41.060 | 453 | 237 | 10 | 1 | 434 | 1 | 442 | 4.32e-105 | 319 |
MS.gene59234.t1 | MTR_5g008070 | 43.301 | 418 | 217 | 9 | 21 | 433 | 23 | 425 | 8.51e-103 | 312 |
MS.gene59234.t1 | MTR_2g059490 | 47.740 | 354 | 177 | 7 | 87 | 434 | 59 | 410 | 9.87e-101 | 308 |
MS.gene59234.t1 | MTR_2g059460 | 42.381 | 420 | 196 | 12 | 23 | 434 | 25 | 406 | 3.16e-95 | 292 |
MS.gene59234.t1 | MTR_5g008110 | 43.944 | 355 | 189 | 7 | 85 | 434 | 66 | 415 | 2.94e-93 | 287 |
MS.gene59234.t1 | MTR_5g008150 | 40.052 | 382 | 218 | 7 | 59 | 434 | 36 | 412 | 6.32e-92 | 284 |
MS.gene59234.t1 | MTR_3g097150 | 37.882 | 425 | 240 | 12 | 22 | 434 | 36 | 448 | 1.78e-84 | 266 |
MS.gene59234.t1 | MTR_1g060750 | 35.980 | 403 | 222 | 9 | 40 | 434 | 2 | 376 | 6.35e-72 | 231 |
MS.gene59234.t1 | MTR_4g045857 | 42.484 | 306 | 139 | 8 | 14 | 312 | 13 | 288 | 1.29e-65 | 212 |
MS.gene59234.t1 | MTR_5g008090 | 40.468 | 299 | 167 | 7 | 142 | 434 | 21 | 314 | 3.25e-65 | 212 |
MS.gene59234.t1 | MTR_7g117430 | 37.950 | 361 | 195 | 11 | 85 | 432 | 140 | 484 | 1.24e-58 | 199 |
MS.gene59234.t1 | MTR_1g115210 | 33.488 | 430 | 252 | 15 | 21 | 432 | 73 | 486 | 5.33e-57 | 195 |
MS.gene59234.t1 | MTR_1g039270 | 34.174 | 436 | 232 | 17 | 28 | 432 | 58 | 469 | 2.73e-56 | 193 |
MS.gene59234.t1 | MTR_6g088765 | 43.028 | 251 | 104 | 5 | 160 | 407 | 3 | 217 | 7.07e-53 | 177 |
MS.gene59234.t1 | MTR_2g028190 | 34.571 | 431 | 246 | 16 | 28 | 432 | 31 | 451 | 1.15e-52 | 183 |
MS.gene59234.t1 | MTR_1g111350 | 33.413 | 419 | 239 | 14 | 21 | 432 | 82 | 467 | 7.82e-51 | 178 |
MS.gene59234.t1 | MTR_6g085010 | 34.857 | 350 | 209 | 11 | 87 | 432 | 157 | 491 | 4.07e-49 | 174 |
MS.gene59234.t1 | MTR_8g103880 | 32.749 | 342 | 207 | 12 | 87 | 420 | 117 | 443 | 1.80e-44 | 161 |
MS.gene59234.t1 | MTR_3g046300 | 28.603 | 458 | 282 | 12 | 11 | 435 | 16 | 461 | 7.48e-44 | 159 |
MS.gene59234.t1 | MTR_3g053710 | 33.425 | 362 | 216 | 11 | 85 | 432 | 116 | 466 | 3.58e-41 | 152 |
MS.gene59234.t1 | MTR_4g007740 | 32.231 | 363 | 213 | 13 | 87 | 433 | 133 | 478 | 4.94e-41 | 152 |
MS.gene59234.t1 | MTR_5g091130 | 32.546 | 381 | 229 | 11 | 74 | 432 | 179 | 553 | 1.31e-40 | 152 |
MS.gene59234.t1 | MTR_2g055840 | 28.947 | 380 | 234 | 13 | 78 | 432 | 5 | 373 | 2.81e-38 | 142 |
MS.gene59234.t1 | MTR_3g068000 | 27.907 | 387 | 221 | 14 | 89 | 435 | 76 | 444 | 9.24e-33 | 129 |
MS.gene59234.t1 | MTR_7g062360 | 29.243 | 383 | 213 | 17 | 89 | 432 | 62 | 425 | 1.28e-32 | 128 |
MS.gene59234.t1 | MTR_7g080230 | 26.906 | 446 | 263 | 17 | 30 | 435 | 11 | 433 | 1.63e-31 | 125 |
MS.gene59234.t1 | MTR_2g070430 | 27.460 | 437 | 271 | 17 | 28 | 429 | 25 | 450 | 2.65e-31 | 125 |
MS.gene59234.t1 | MTR_2g063110 | 27.919 | 394 | 236 | 11 | 85 | 432 | 117 | 508 | 1.49e-29 | 120 |
MS.gene59234.t1 | MTR_1g078240 | 27.720 | 386 | 232 | 17 | 81 | 435 | 63 | 432 | 1.92e-29 | 120 |
MS.gene59234.t1 | MTR_3g053980 | 31.285 | 358 | 223 | 10 | 85 | 432 | 141 | 485 | 1.96e-29 | 120 |
MS.gene59234.t1 | MTR_1g078240 | 28.351 | 388 | 228 | 18 | 81 | 435 | 63 | 433 | 8.51e-29 | 118 |
MS.gene59234.t1 | MTR_7g021510 | 27.179 | 390 | 240 | 17 | 73 | 435 | 64 | 436 | 9.83e-29 | 118 |
MS.gene59234.t1 | MTR_6g084710 | 27.857 | 420 | 247 | 20 | 49 | 432 | 151 | 550 | 2.16e-28 | 117 |
MS.gene59234.t1 | MTR_8g094590 | 28.307 | 378 | 218 | 17 | 85 | 433 | 72 | 425 | 4.61e-28 | 115 |
MS.gene59234.t1 | MTR_4g008110 | 52.991 | 117 | 31 | 1 | 158 | 274 | 45 | 137 | 1.18e-27 | 107 |
MS.gene59234.t1 | MTR_8g094590 | 32.950 | 261 | 143 | 10 | 85 | 335 | 72 | 310 | 1.26e-26 | 109 |
MS.gene59234.t1 | MTR_6g084710 | 29.217 | 332 | 200 | 15 | 49 | 365 | 151 | 462 | 1.97e-26 | 111 |
MS.gene59234.t1 | MTR_2g084550 | 30.688 | 378 | 218 | 16 | 85 | 433 | 76 | 438 | 2.20e-26 | 111 |
MS.gene59234.t1 | MTR_8g094590 | 30.851 | 282 | 161 | 11 | 85 | 354 | 72 | 331 | 4.08e-26 | 109 |
MS.gene59234.t1 | MTR_7g105850 | 27.329 | 483 | 283 | 21 | 2 | 435 | 5 | 468 | 4.65e-26 | 110 |
MS.gene59234.t1 | MTR_3g065160 | 26.757 | 370 | 231 | 14 | 88 | 434 | 76 | 428 | 6.49e-26 | 109 |
MS.gene59234.t1 | MTR_4g095270 | 25.613 | 367 | 236 | 12 | 85 | 434 | 79 | 425 | 1.04e-25 | 110 |
MS.gene59234.t1 | MTR_4g095270 | 25.613 | 367 | 236 | 12 | 85 | 434 | 79 | 425 | 1.12e-25 | 110 |
MS.gene59234.t1 | MTR_5g016260 | 24.932 | 369 | 236 | 12 | 85 | 434 | 87 | 433 | 3.53e-25 | 108 |
MS.gene59234.t1 | MTR_4g023650 | 27.595 | 395 | 227 | 19 | 75 | 434 | 51 | 421 | 3.97e-25 | 107 |
MS.gene59234.t1 | MTR_1g061940 | 29.178 | 377 | 230 | 16 | 85 | 435 | 82 | 447 | 4.78e-25 | 107 |
MS.gene59234.t1 | MTR_3g087780 | 26.164 | 451 | 260 | 18 | 28 | 432 | 27 | 450 | 5.24e-25 | 107 |
MS.gene59234.t1 | MTR_5g016260 | 24.932 | 369 | 236 | 12 | 85 | 434 | 87 | 433 | 5.99e-25 | 108 |
MS.gene59234.t1 | MTR_1g078240 | 29.560 | 318 | 183 | 15 | 81 | 373 | 63 | 364 | 6.67e-25 | 105 |
MS.gene59234.t1 | MTR_4g056420 | 29.319 | 382 | 217 | 18 | 85 | 433 | 76 | 437 | 7.22e-25 | 107 |
MS.gene59234.t1 | MTR_1g037630 | 27.934 | 426 | 266 | 16 | 26 | 433 | 27 | 429 | 1.30e-24 | 105 |
MS.gene59234.t1 | MTR_1g029810 | 26.455 | 378 | 228 | 18 | 85 | 434 | 56 | 411 | 1.79e-24 | 105 |
MS.gene59234.t1 | MTR_3g096930 | 25.594 | 379 | 230 | 15 | 85 | 435 | 83 | 437 | 1.91e-24 | 105 |
MS.gene59234.t1 | MTR_1g029810 | 26.190 | 378 | 229 | 18 | 85 | 434 | 56 | 411 | 2.07e-24 | 105 |
MS.gene59234.t1 | MTR_0945s0010 | 41.935 | 124 | 70 | 2 | 311 | 433 | 1 | 123 | 4.76e-24 | 98.2 |
MS.gene59234.t1 | MTR_8g075090 | 29.032 | 372 | 207 | 19 | 92 | 434 | 118 | 461 | 9.38e-24 | 103 |
MS.gene59234.t1 | MTR_5g022880 | 26.179 | 424 | 254 | 16 | 45 | 432 | 61 | 461 | 3.49e-23 | 102 |
MS.gene59234.t1 | MTR_8g075090 | 28.919 | 370 | 206 | 19 | 92 | 432 | 118 | 459 | 3.57e-23 | 101 |
MS.gene59234.t1 | MTR_4g023630 | 26.531 | 392 | 235 | 17 | 75 | 434 | 51 | 421 | 5.18e-23 | 100 |
MS.gene59234.t1 | MTR_7g102750 | 27.704 | 379 | 231 | 18 | 85 | 435 | 80 | 443 | 2.88e-22 | 99.4 |
MS.gene59234.t1 | MTR_5g061690 | 26.966 | 445 | 253 | 22 | 28 | 427 | 25 | 442 | 4.28e-22 | 99.0 |
MS.gene59234.t1 | MTR_3g014290 | 28.836 | 378 | 235 | 14 | 72 | 433 | 58 | 417 | 4.71e-22 | 98.2 |
MS.gene59234.t1 | MTR_7g080230 | 26.554 | 354 | 214 | 13 | 110 | 435 | 28 | 363 | 5.40e-22 | 97.8 |
MS.gene59234.t1 | MTR_2g103340 | 43.200 | 125 | 26 | 2 | 21 | 145 | 34 | 113 | 6.81e-22 | 93.2 |
MS.gene59234.t1 | MTR_2g103340 | 50.633 | 79 | 30 | 3 | 352 | 429 | 89 | 159 | 6.91e-11 | 61.6 |
MS.gene59234.t1 | MTR_5g080330 | 28.610 | 367 | 185 | 16 | 103 | 435 | 2 | 325 | 6.69e-21 | 94.7 |
MS.gene59234.t1 | MTR_8g075090 | 29.819 | 332 | 186 | 17 | 92 | 398 | 118 | 427 | 1.10e-20 | 94.4 |
MS.gene59234.t1 | MTR_5g077850 | 25.789 | 380 | 226 | 15 | 88 | 434 | 83 | 439 | 1.23e-20 | 94.0 |
MS.gene59234.t1 | MTR_4g100990 | 27.206 | 408 | 223 | 17 | 87 | 432 | 75 | 470 | 6.33e-20 | 92.4 |
MS.gene59234.t1 | MTR_7g102750 | 29.167 | 312 | 184 | 15 | 85 | 373 | 80 | 377 | 9.47e-19 | 88.6 |
MS.gene59234.t1 | MTR_3g087780 | 28.349 | 321 | 192 | 13 | 129 | 432 | 45 | 344 | 8.84e-18 | 85.5 |
MS.gene59234.t1 | MTR_3g087780 | 28.037 | 321 | 193 | 12 | 129 | 432 | 9 | 308 | 9.78e-18 | 85.1 |
MS.gene59234.t1 | MTR_5g061690 | 29.412 | 306 | 175 | 17 | 138 | 427 | 23 | 303 | 2.75e-17 | 83.6 |
MS.gene59234.t1 | MTR_8g039540 | 26.222 | 450 | 285 | 18 | 9 | 433 | 7 | 434 | 2.87e-17 | 84.0 |
MS.gene59234.t1 | MTR_3g006820 | 24.282 | 383 | 250 | 14 | 78 | 434 | 46 | 414 | 5.65e-17 | 82.8 |
MS.gene59234.t1 | MTR_8g075010 | 25.876 | 371 | 222 | 16 | 90 | 432 | 104 | 449 | 2.35e-16 | 81.6 |
MS.gene59234.t1 | MTR_5g077920 | 25.253 | 396 | 250 | 14 | 72 | 435 | 48 | 429 | 1.67e-15 | 78.6 |
MS.gene59234.t1 | MTR_3g100500 | 29.041 | 365 | 219 | 16 | 85 | 432 | 96 | 437 | 4.30e-15 | 77.4 |
MS.gene59234.t1 | MTR_1g072380 | 22.807 | 399 | 232 | 15 | 87 | 430 | 57 | 434 | 2.04e-12 | 68.9 |
MS.gene59234.t1 | MTR_2g037710 | 27.230 | 213 | 132 | 9 | 224 | 432 | 12 | 205 | 2.42e-12 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59234.t1 | AT1G64830 | 52.068 | 411 | 191 | 5 | 26 | 434 | 24 | 430 | 1.62e-142 | 414 |
MS.gene59234.t1 | AT5G33340 | 52.798 | 411 | 187 | 6 | 27 | 434 | 30 | 436 | 2.50e-138 | 404 |
MS.gene59234.t1 | AT2G35615 | 46.259 | 441 | 213 | 8 | 14 | 433 | 7 | 444 | 3.92e-117 | 350 |
MS.gene59234.t1 | AT1G31450 | 44.921 | 443 | 220 | 9 | 5 | 433 | 10 | 442 | 1.26e-109 | 330 |
MS.gene59234.t1 | AT2G28010 | 39.906 | 426 | 203 | 11 | 13 | 433 | 15 | 392 | 1.38e-87 | 272 |
MS.gene59234.t1 | AT2G28040 | 40.521 | 422 | 199 | 14 | 16 | 433 | 18 | 391 | 3.50e-84 | 263 |
MS.gene59234.t1 | AT2G28040 | 42.037 | 383 | 196 | 11 | 54 | 433 | 23 | 382 | 4.69e-84 | 263 |
MS.gene59234.t1 | AT2G28030 | 42.149 | 363 | 185 | 7 | 74 | 433 | 48 | 388 | 1.96e-81 | 256 |
MS.gene59234.t1 | AT2G28220 | 37.585 | 439 | 220 | 12 | 3 | 433 | 6 | 398 | 1.30e-80 | 254 |
MS.gene59234.t1 | AT2G28225 | 40.489 | 368 | 188 | 9 | 74 | 433 | 54 | 398 | 1.37e-77 | 247 |
MS.gene59234.t1 | AT2G03200 | 36.806 | 432 | 236 | 13 | 26 | 434 | 43 | 460 | 1.66e-75 | 243 |
MS.gene59234.t1 | AT1G01300 | 38.655 | 357 | 198 | 12 | 85 | 432 | 140 | 484 | 2.11e-58 | 199 |
MS.gene59234.t1 | AT3G61820 | 38.228 | 395 | 208 | 16 | 55 | 432 | 108 | 483 | 1.78e-57 | 196 |
MS.gene59234.t1 | AT4G30030 | 36.339 | 366 | 205 | 14 | 79 | 432 | 70 | 419 | 9.86e-57 | 193 |
MS.gene59234.t1 | AT3G18490 | 35.955 | 356 | 205 | 13 | 85 | 432 | 160 | 500 | 2.21e-54 | 189 |
MS.gene59234.t1 | AT3G20015 | 31.390 | 446 | 247 | 17 | 20 | 432 | 51 | 470 | 1.07e-50 | 178 |
MS.gene59234.t1 | AT2G23945 | 28.540 | 459 | 277 | 16 | 9 | 434 | 10 | 450 | 2.37e-50 | 177 |
MS.gene59234.t1 | AT1G25510 | 35.775 | 355 | 204 | 13 | 85 | 432 | 146 | 483 | 1.14e-49 | 176 |
MS.gene59234.t1 | AT3G25700 | 31.455 | 426 | 245 | 18 | 39 | 432 | 39 | 449 | 6.79e-46 | 165 |
MS.gene59234.t1 | AT5G10770 | 34.819 | 359 | 210 | 12 | 85 | 433 | 130 | 474 | 3.77e-44 | 160 |
MS.gene59234.t1 | AT5G10760 | 33.985 | 409 | 232 | 15 | 31 | 432 | 87 | 464 | 4.47e-44 | 160 |
MS.gene59234.t1 | AT4G30040 | 31.663 | 439 | 249 | 20 | 14 | 427 | 15 | 427 | 2.74e-43 | 157 |
MS.gene59234.t1 | AT1G79720 | 36.074 | 377 | 181 | 19 | 87 | 432 | 135 | 482 | 2.45e-42 | 156 |
MS.gene59234.t1 | AT3G12700 | 30.447 | 358 | 236 | 8 | 87 | 433 | 106 | 461 | 1.17e-40 | 151 |
MS.gene59234.t1 | AT5G36260 | 31.117 | 376 | 219 | 16 | 85 | 435 | 76 | 436 | 1.93e-40 | 150 |
MS.gene59234.t1 | AT2G42980 | 32.990 | 388 | 221 | 15 | 74 | 432 | 147 | 524 | 2.10e-40 | 151 |
MS.gene59234.t1 | AT3G59080 | 31.865 | 386 | 226 | 14 | 74 | 432 | 157 | 532 | 2.52e-39 | 148 |
MS.gene59234.t1 | AT2G39710 | 31.300 | 377 | 203 | 16 | 89 | 427 | 67 | 425 | 2.92e-36 | 138 |
MS.gene59234.t1 | AT3G02740 | 29.365 | 378 | 231 | 14 | 76 | 433 | 79 | 440 | 3.71e-36 | 139 |
MS.gene59234.t1 | AT3G02740 | 29.155 | 367 | 229 | 13 | 87 | 433 | 10 | 365 | 5.80e-36 | 137 |
MS.gene59234.t1 | AT1G65240 | 28.763 | 372 | 226 | 15 | 85 | 433 | 72 | 427 | 4.54e-33 | 130 |
MS.gene59234.t1 | AT3G59080 | 29.396 | 381 | 206 | 13 | 74 | 432 | 157 | 496 | 4.40e-29 | 119 |
MS.gene59234.t1 | AT5G02190 | 26.862 | 376 | 221 | 15 | 96 | 432 | 82 | 442 | 8.37e-29 | 118 |
MS.gene59234.t1 | AT1G09750 | 30.130 | 385 | 225 | 16 | 73 | 432 | 83 | 448 | 9.92e-29 | 117 |
MS.gene59234.t1 | AT1G05840 | 28.382 | 377 | 231 | 13 | 85 | 435 | 78 | 441 | 1.96e-28 | 117 |
MS.gene59234.t1 | AT3G54400 | 29.156 | 391 | 237 | 15 | 62 | 433 | 56 | 425 | 3.93e-28 | 115 |
MS.gene59234.t1 | AT3G50050 | 26.164 | 451 | 280 | 18 | 12 | 434 | 13 | 438 | 5.28e-28 | 117 |
MS.gene59234.t1 | AT5G45120 | 27.805 | 410 | 224 | 18 | 84 | 432 | 80 | 478 | 8.08e-28 | 115 |
MS.gene59234.t1 | AT4G33490 | 26.161 | 409 | 236 | 17 | 63 | 432 | 30 | 411 | 4.47e-27 | 112 |
MS.gene59234.t1 | AT1G66180 | 26.005 | 373 | 235 | 14 | 88 | 435 | 73 | 429 | 6.70e-27 | 112 |
MS.gene59234.t1 | AT5G43100 | 26.703 | 367 | 229 | 13 | 85 | 433 | 74 | 418 | 1.27e-26 | 112 |
MS.gene59234.t1 | AT1G44130 | 25.750 | 400 | 244 | 15 | 67 | 434 | 23 | 401 | 1.28e-26 | 111 |
MS.gene59234.t1 | AT5G43100 | 26.703 | 367 | 229 | 13 | 85 | 433 | 74 | 418 | 2.92e-26 | 112 |
MS.gene59234.t1 | AT2G36670 | 27.540 | 374 | 237 | 14 | 85 | 435 | 98 | 460 | 6.96e-26 | 110 |
MS.gene59234.t1 | AT1G49050 | 26.478 | 389 | 237 | 18 | 80 | 434 | 197 | 570 | 7.74e-26 | 110 |
MS.gene59234.t1 | AT1G08210 | 28.495 | 372 | 231 | 13 | 85 | 433 | 82 | 441 | 9.18e-26 | 109 |
MS.gene59234.t1 | AT1G49050 | 25.967 | 362 | 222 | 15 | 105 | 434 | 50 | 397 | 9.63e-26 | 108 |
MS.gene59234.t1 | AT1G08210 | 28.495 | 372 | 231 | 13 | 85 | 433 | 130 | 489 | 1.06e-25 | 109 |
MS.gene59234.t1 | AT1G08210 | 28.495 | 372 | 231 | 13 | 85 | 433 | 116 | 475 | 1.08e-25 | 109 |
MS.gene59234.t1 | AT2G36670 | 27.419 | 372 | 236 | 14 | 87 | 435 | 105 | 465 | 1.37e-25 | 109 |
MS.gene59234.t1 | AT2G36670 | 27.273 | 374 | 234 | 15 | 87 | 435 | 34 | 394 | 1.41e-25 | 108 |
MS.gene59234.t1 | AT2G36670 | 27.273 | 374 | 234 | 15 | 87 | 435 | 34 | 394 | 1.41e-25 | 108 |
MS.gene59234.t1 | AT5G37540 | 26.415 | 371 | 234 | 13 | 88 | 432 | 81 | 438 | 3.68e-25 | 107 |
MS.gene59234.t1 | AT5G22850 | 29.521 | 376 | 229 | 16 | 85 | 435 | 79 | 443 | 5.78e-25 | 107 |
MS.gene59234.t1 | AT1G77480 | 26.455 | 378 | 229 | 17 | 85 | 434 | 65 | 421 | 2.84e-24 | 104 |
MS.gene59234.t1 | AT1G77480 | 26.455 | 378 | 229 | 17 | 85 | 434 | 65 | 421 | 5.06e-24 | 104 |
MS.gene59234.t1 | AT2G17760 | 27.972 | 429 | 248 | 22 | 32 | 432 | 54 | 449 | 1.38e-23 | 103 |
MS.gene59234.t1 | AT4G33490 | 29.934 | 304 | 170 | 13 | 63 | 349 | 27 | 304 | 2.15e-23 | 101 |
MS.gene59234.t1 | AT4G12920 | 26.893 | 383 | 243 | 15 | 61 | 432 | 31 | 387 | 4.13e-23 | 100 |
MS.gene59234.t1 | AT1G49050 | 27.899 | 276 | 173 | 12 | 80 | 343 | 197 | 458 | 6.86e-22 | 98.2 |
MS.gene59234.t1 | AT1G08210 | 26.566 | 399 | 231 | 14 | 85 | 433 | 82 | 468 | 8.75e-21 | 95.1 |
MS.gene59234.t1 | AT3G52500 | 28.389 | 391 | 228 | 17 | 85 | 433 | 88 | 468 | 1.43e-20 | 94.4 |
MS.gene59234.t1 | AT5G10080 | 24.948 | 477 | 275 | 22 | 11 | 434 | 9 | 455 | 2.02e-20 | 94.0 |
MS.gene59234.t1 | AT3G51360 | 28.297 | 364 | 216 | 15 | 92 | 432 | 104 | 445 | 5.79e-20 | 92.4 |
MS.gene59234.t1 | AT3G51360 | 28.297 | 364 | 216 | 15 | 92 | 432 | 94 | 435 | 6.74e-20 | 92.4 |
MS.gene59234.t1 | AT3G51360 | 28.297 | 364 | 216 | 15 | 92 | 432 | 10 | 351 | 8.97e-20 | 91.3 |
MS.gene59234.t1 | AT5G07030 | 25.586 | 469 | 284 | 18 | 2 | 433 | 15 | 455 | 2.48e-18 | 87.4 |
MS.gene59234.t1 | AT3G51350 | 25.336 | 446 | 270 | 19 | 27 | 432 | 30 | 452 | 3.00e-18 | 87.4 |
MS.gene59234.t1 | AT3G51360 | 30.333 | 300 | 168 | 13 | 92 | 372 | 104 | 381 | 4.11e-18 | 86.7 |
MS.gene59234.t1 | AT3G51360 | 30.333 | 300 | 168 | 13 | 92 | 372 | 94 | 371 | 4.81e-18 | 86.3 |
MS.gene59234.t1 | AT3G51360 | 30.333 | 300 | 168 | 13 | 92 | 372 | 104 | 381 | 5.10e-18 | 86.3 |
MS.gene59234.t1 | AT3G51360 | 30.333 | 300 | 168 | 13 | 92 | 372 | 94 | 371 | 5.43e-18 | 85.9 |
MS.gene59234.t1 | AT3G51340 | 25.691 | 362 | 226 | 14 | 92 | 432 | 108 | 447 | 7.01e-17 | 83.2 |
MS.gene59234.t1 | AT4G35880 | 25.886 | 367 | 223 | 16 | 90 | 432 | 110 | 451 | 2.27e-16 | 81.6 |
MS.gene59234.t1 | AT3G51360 | 30.469 | 256 | 146 | 10 | 92 | 334 | 104 | 340 | 5.37e-15 | 76.3 |
MS.gene59234.t1 | AT3G51340 | 27.018 | 285 | 174 | 11 | 92 | 359 | 108 | 375 | 7.06e-15 | 76.6 |
MS.gene59234.t1 | AT3G25700 | 27.317 | 205 | 126 | 7 | 39 | 229 | 39 | 234 | 7.11e-15 | 75.9 |
MS.gene59234.t1 | AT3G51330 | 27.174 | 368 | 220 | 16 | 92 | 432 | 107 | 453 | 8.06e-15 | 76.6 |
MS.gene59234.t1 | AT3G51330 | 27.174 | 368 | 220 | 16 | 92 | 432 | 107 | 453 | 9.13e-15 | 76.6 |
MS.gene59234.t1 | AT3G51340 | 27.113 | 284 | 173 | 11 | 92 | 358 | 108 | 374 | 1.17e-14 | 75.9 |
MS.gene59234.t1 | AT3G51340 | 24.397 | 373 | 229 | 14 | 92 | 432 | 108 | 459 | 2.08e-14 | 75.5 |
MS.gene59234.t1 | AT3G42550 | 36.538 | 104 | 64 | 1 | 87 | 188 | 78 | 181 | 1.60e-13 | 72.4 |
MS.gene59234.t1 | AT4G35880 | 25.914 | 301 | 186 | 13 | 90 | 372 | 110 | 391 | 1.99e-13 | 72.4 |
MS.gene59234.t1 | AT3G51330 | 28.477 | 302 | 179 | 13 | 92 | 373 | 107 | 391 | 8.20e-13 | 70.5 |
Find 95 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTTTGTAGTATGGTGATTT+TGG | 0.132017 | 5.2:-68705559 | None:intergenic |
TCGTGCCAATCATTTCTTTA+AGG | 0.171874 | 5.2:+68705633 | MS.gene59234:CDS |
GCTCGACTTGGTTCCATCTT+TGG | 0.197171 | 5.2:+68706645 | MS.gene59234:CDS |
GGAGATGCCGCTGTGGTTTC+GGG | 0.226097 | 5.2:+68706222 | MS.gene59234:CDS |
TTAAAATGTGCGGTGATTAT+AGG | 0.227453 | 5.2:-68706537 | None:intergenic |
CTCGACTTGGTTCCATCTTT+GGG | 0.248725 | 5.2:+68706646 | MS.gene59234:CDS |
TGGAGATGCCGCTGTGGTTT+CGG | 0.272220 | 5.2:+68706221 | MS.gene59234:CDS |
GGAAACAAAAGAGTAGAATT+TGG | 0.282532 | 5.2:+68706324 | MS.gene59234:CDS |
TCATTTCCTAAAACTGTGAT+AGG | 0.290097 | 5.2:+68706024 | MS.gene59234:CDS |
ATGACATAACCACCCCTATC+AGG | 0.317982 | 5.2:-68705691 | None:intergenic |
TGGTTCCATCTTTGGGAACT+TGG | 0.335588 | 5.2:+68706653 | MS.gene59234:CDS |
TCAGGGATTACAGTTGATTC+AGG | 0.336604 | 5.2:-68705673 | None:intergenic |
CATAGGCCGAATTGTTGATT+AGG | 0.338419 | 5.2:-68706483 | None:intergenic |
GAAATGATTGGCACGATTGA+TGG | 0.352741 | 5.2:-68705626 | None:intergenic |
GCGACAAGTATACTCAGTTT+TGG | 0.364508 | 5.2:+68706201 | MS.gene59234:CDS |
GGTAACATCATAATTGATTC+AGG | 0.364855 | 5.2:+68706372 | MS.gene59234:CDS |
AATCAACTGTAATCCCTGAT+AGG | 0.365381 | 5.2:+68705677 | MS.gene59234:CDS |
TGTCAATATAAAATTAGTTA+TGG | 0.366380 | 5.2:+68705928 | MS.gene59234:CDS |
ACTGATAATGCCGGGACGTT+TGG | 0.369941 | 5.2:+68706054 | MS.gene59234:CDS |
ATACAGGTAGTGACATTGTT+TGG | 0.380232 | 5.2:+68705761 | MS.gene59234:CDS |
GGAATCAGCTGTGGCGGATT+CGG | 0.381615 | 5.2:+68706437 | MS.gene59234:CDS |
ACCCCTCCAACTAAGATATA+CGG | 0.395309 | 5.2:+68705730 | MS.gene59234:CDS |
GGTGTCTCTCATAACACAAT+TGG | 0.397228 | 5.2:+68706116 | MS.gene59234:CDS |
GCAATACCGTATATCTTAGT+TGG | 0.401415 | 5.2:-68705736 | None:intergenic |
TTGAGCCAAGTTCCCAAAGA+TGG | 0.402500 | 5.2:-68706658 | None:intergenic |
CTTGGCTCAACAAAATTTGT+TGG | 0.415034 | 5.2:+68706671 | MS.gene59234:CDS |
CTTCAACACTCGTTACGCTT+TGG | 0.416239 | 5.2:-68706745 | None:intergenic |
GTATAGTTGGCCTTGGAGGC+GGG | 0.418166 | 5.2:+68706091 | MS.gene59234:CDS |
AAAGAAAGAAAGAGTAAGAA+GGG | 0.419999 | 5.2:-68705461 | None:intergenic |
CAAACAATACCCTCAGCAAT+TGG | 0.420182 | 5.2:-68706600 | None:intergenic |
AGGAAATGAAACAGGACTTC+CGG | 0.422734 | 5.2:-68706010 | None:intergenic |
TGGTAAATTCTCTTATTGTT+TGG | 0.432097 | 5.2:+68706152 | MS.gene59234:CDS |
CAACCATCATCTGCTCGACT+TGG | 0.440590 | 5.2:+68706633 | MS.gene59234:CDS |
AAAAGAAAGAAAGAGTAAGA+AGG | 0.440746 | 5.2:-68705462 | None:intergenic |
AGCTCTGGTATAGTTGGCCT+TGG | 0.443123 | 5.2:+68706084 | MS.gene59234:CDS |
GGTATAGTTGGCCTTGGAGG+CGG | 0.452029 | 5.2:+68706090 | MS.gene59234:CDS |
TTCTTTAAGGATTCTGACTC+AGG | 0.452767 | 5.2:+68705646 | MS.gene59234:CDS |
GATGATCCTAATCAACAATT+CGG | 0.454884 | 5.2:+68706477 | MS.gene59234:CDS |
ACGTTTGGAGGCGCAAGCTC+TGG | 0.461431 | 5.2:+68706069 | MS.gene59234:CDS |
ACACAATTGGGATCGTCAAT+TGG | 0.461955 | 5.2:+68706129 | MS.gene59234:CDS |
GCCGCTGTGGTTTCGGGTGA+CGG | 0.464493 | 5.2:+68706228 | MS.gene59234:CDS |
GCTCAACAAAATTTGTTGGT+TGG | 0.464745 | 5.2:+68706675 | MS.gene59234:CDS |
CCTAAAACTGTGATAGGATG+TGG | 0.472735 | 5.2:+68706030 | MS.gene59234:CDS |
AGAATCCTTAAAGAAATGAT+TGG | 0.474578 | 5.2:-68705638 | None:intergenic |
AAAAGAAGCAATGAAACAAA+GGG | 0.475787 | 5.2:-68705485 | None:intergenic |
CTTGCATTGGAGTCCACCTC+CGG | 0.477636 | 5.2:+68705991 | MS.gene59234:CDS |
TCTGGTATAGTTGGCCTTGG+AGG | 0.477995 | 5.2:+68706087 | MS.gene59234:CDS |
GATAATGCCGGGACGTTTGG+AGG | 0.479068 | 5.2:+68706057 | MS.gene59234:CDS |
AGTTGGCCTTGGAGGCGGGC+CGG | 0.481112 | 5.2:+68706095 | MS.gene59234:CDS |
ACATTAGAAGCATTTAGTGT+TGG | 0.483347 | 5.2:+68706303 | MS.gene59234:CDS |
ACCTTTGTTCCAATTGCTGA+GGG | 0.486978 | 5.2:+68706591 | MS.gene59234:CDS |
TAGTGTTGACACTCTTGCAT+TGG | 0.507261 | 5.2:+68705978 | MS.gene59234:CDS |
ATCCGAAGTCTATACTAACT+TGG | 0.511692 | 5.2:+68706416 | MS.gene59234:CDS |
TCTTCAGAAGGTGGTGATGA+AGG | 0.515904 | 5.2:+68706351 | MS.gene59234:CDS |
ATCAACTGTAATCCCTGATA+GGG | 0.516703 | 5.2:+68705678 | MS.gene59234:CDS |
GGCGCAAGCTCTGGTATAGT+TGG | 0.524413 | 5.2:+68706078 | MS.gene59234:CDS |
GTGTCTCTCATAACACAATT+GGG | 0.525876 | 5.2:+68706117 | MS.gene59234:CDS |
GAGACACCGGCCCGCCTCCA+AGG | 0.526730 | 5.2:-68706101 | None:intergenic |
ATATACGGTATTGCTGATAC+AGG | 0.526965 | 5.2:+68705745 | MS.gene59234:CDS |
TACCTTTGTTCCAATTGCTG+AGG | 0.535011 | 5.2:+68706590 | MS.gene59234:CDS |
GGATGTGGAACTGATAATGC+CGG | 0.535589 | 5.2:+68706045 | MS.gene59234:CDS |
TACCGTATATCTTAGTTGGA+GGG | 0.552333 | 5.2:-68705732 | None:intergenic |
TGAAACAGGACTTCCGGAGG+TGG | 0.556306 | 5.2:-68706004 | None:intergenic |
GAACCAAGTCGAGCAGATGA+TGG | 0.559364 | 5.2:-68706636 | None:intergenic |
CAAGTCGAGCAGATGATGGT+TGG | 0.560415 | 5.2:-68706632 | None:intergenic |
GAATTTGGAGGCTCTTCAGA+AGG | 0.562761 | 5.2:+68706339 | MS.gene59234:CDS |
TTTGACTCCTTGTTCAACAA+TGG | 0.563922 | 5.2:-68706177 | None:intergenic |
ATACCGTATATCTTAGTTGG+AGG | 0.568782 | 5.2:-68705733 | None:intergenic |
ACCGTATATCTTAGTTGGAG+GGG | 0.570548 | 5.2:-68705731 | None:intergenic |
AAGTTAGTATAGACTTCGGA+TGG | 0.574451 | 5.2:-68706414 | None:intergenic |
TGACATAACCACCCCTATCA+GGG | 0.581426 | 5.2:-68705690 | None:intergenic |
AACAAAAGAGTAGAATTTGG+AGG | 0.583454 | 5.2:+68706327 | MS.gene59234:CDS |
TTCCAAGTTAGTATAGACTT+CGG | 0.587251 | 5.2:-68706418 | None:intergenic |
TGGTTGTAACATTGTTCACA+AGG | 0.591014 | 5.2:-68705796 | None:intergenic |
TACGCTTTGGTACAATCAGT+AGG | 0.595820 | 5.2:-68706732 | None:intergenic |
GATGTGGAACTGATAATGCC+GGG | 0.599376 | 5.2:+68706046 | MS.gene59234:CDS |
ACCCTCAGCAATTGGAACAA+AGG | 0.601197 | 5.2:-68706592 | None:intergenic |
TTGATGTCAAACTATAGCAT+AGG | 0.608908 | 5.2:-68706500 | None:intergenic |
TTTGGAGGCTCTTCAGAAGG+TGG | 0.613424 | 5.2:+68706342 | MS.gene59234:CDS |
TACTAACTTGGAATCAGCTG+TGG | 0.614064 | 5.2:+68706428 | MS.gene59234:CDS |
TAACTTGGAATCAGCTGTGG+CGG | 0.614924 | 5.2:+68706431 | MS.gene59234:CDS |
TATGTCATGACGTATTCAGT+TGG | 0.616181 | 5.2:+68705706 | MS.gene59234:CDS |
GCTTGCGCCTCCAAACGTCC+CGG | 0.632742 | 5.2:-68706064 | None:intergenic |
ATCGGCACCTTTAAAATGTG+CGG | 0.635428 | 5.2:-68706547 | None:intergenic |
TTTGGTGCCATTGTTGAACA+AGG | 0.640174 | 5.2:+68706170 | MS.gene59234:CDS |
AATAGAATGCAACTCAACAT+CGG | 0.645414 | 5.2:-68706565 | None:intergenic |
CAATTGGGATCGTCAATTGG+TGG | 0.645590 | 5.2:+68706132 | MS.gene59234:CDS |
AATTGTGTTATGAGAGACAC+CGG | 0.647126 | 5.2:-68706114 | None:intergenic |
GTGCTGCATCGACAAAGTGT+TGG | 0.649567 | 5.2:-68705597 | None:intergenic |
TCAACTGTAATCCCTGATAG+GGG | 0.660378 | 5.2:+68705679 | MS.gene59234:CDS |
TGACATAGCTTAGACGCACA+AGG | 0.661062 | 5.2:-68705868 | None:intergenic |
ACTGTAATCCCTGATAGGGG+TGG | 0.665786 | 5.2:+68705682 | MS.gene59234:CDS |
GGAGATTATTCACATTCACG+AGG | 0.685076 | 5.2:+68705949 | MS.gene59234:CDS |
AAATGAAACAGGACTTCCGG+AGG | 0.727776 | 5.2:-68706007 | None:intergenic |
ACCGTCACCCGAAACCACAG+CGG | 0.745897 | 5.2:-68706229 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTCAATATAAAATTAGTTA+TGG | + | chr5.2:68705928-68705947 | MS.gene59234:CDS | 15.0% |
!!! | TTTTATATTGACAAGAATTT+TGG | - | chr5.2:68705921-68705940 | None:intergenic | 15.0% |
!!! | AAAGTGTTGGTATTTATTTT+CGG | - | chr5.2:68705587-68705606 | None:intergenic | 20.0% |
!!! | GATTTTGATGGATTAAAAAT+GGG | - | chr5.2:68705829-68705848 | None:intergenic | 20.0% |
!!! | TGATTTTGATGGATTAAAAA+TGG | - | chr5.2:68705830-68705849 | None:intergenic | 20.0% |
! | AAAAAGAAGCAATGAAACAA+AGG | - | chr5.2:68705489-68705508 | None:intergenic | 25.0% |
! | AAAAGAAAGAAAGAGTAAGA+AGG | - | chr5.2:68705465-68705484 | None:intergenic | 25.0% |
! | AAAAGAAGCAATGAAACAAA+GGG | - | chr5.2:68705488-68705507 | None:intergenic | 25.0% |
! | AAAGAAAGAAAGAGTAAGAA+GGG | - | chr5.2:68705464-68705483 | None:intergenic | 25.0% |
! | AATGTCAAAAAGTAGAAAAC+TGG | - | chr5.2:68706288-68706307 | None:intergenic | 25.0% |
! | AGAATCCTTAAAGAAATGAT+TGG | - | chr5.2:68705641-68705660 | None:intergenic | 25.0% |
! | TGGTAAATTCTCTTATTGTT+TGG | + | chr5.2:68706152-68706171 | MS.gene59234:CDS | 25.0% |
!! | TTGTAACTAGATGATTTTGA+TGG | - | chr5.2:68705841-68705860 | None:intergenic | 25.0% |
AACAAAAGAGTAGAATTTGG+AGG | + | chr5.2:68706327-68706346 | MS.gene59234:CDS | 30.0% | |
AATAGAATGCAACTCAACAT+CGG | - | chr5.2:68706568-68706587 | None:intergenic | 30.0% | |
GATGATCCTAATCAACAATT+CGG | + | chr5.2:68706477-68706496 | MS.gene59234:CDS | 30.0% | |
GGAAACAAAAGAGTAGAATT+TGG | + | chr5.2:68706324-68706343 | MS.gene59234:CDS | 30.0% | |
TCATTTCCTAAAACTGTGAT+AGG | + | chr5.2:68706024-68706043 | MS.gene59234:CDS | 30.0% | |
TTAAAATGTGCGGTGATTAT+AGG | - | chr5.2:68706540-68706559 | None:intergenic | 30.0% | |
TTCCAAGTTAGTATAGACTT+CGG | - | chr5.2:68706421-68706440 | None:intergenic | 30.0% | |
TTGATGTCAAACTATAGCAT+AGG | - | chr5.2:68706503-68706522 | None:intergenic | 30.0% | |
! | ATAATCACCGCACATTTTAA+AGG | + | chr5.2:68706540-68706559 | MS.gene59234:CDS | 30.0% |
! | GGTAACATCATAATTGATTC+AGG | + | chr5.2:68706372-68706391 | MS.gene59234:CDS | 30.0% |
! | GTTTGTAGTATGGTGATTTT+GGG | - | chr5.2:68705561-68705580 | None:intergenic | 30.0% |
! | TTTGTAGTATGGTGATTTTG+GGG | - | chr5.2:68705560-68705579 | None:intergenic | 30.0% |
!! | ACATTAGAAGCATTTAGTGT+TGG | + | chr5.2:68706303-68706322 | MS.gene59234:CDS | 30.0% |
!! | TGTTGGTATTTATTTTCGGT+AGG | - | chr5.2:68705583-68705602 | None:intergenic | 30.0% |
!!! | ACAGTTTTAGGAAATGAAAC+AGG | - | chr5.2:68706021-68706040 | None:intergenic | 30.0% |
AAGTTAGTATAGACTTCGGA+TGG | - | chr5.2:68706417-68706436 | None:intergenic | 35.0% | |
AATCAACTGTAATCCCTGAT+AGG | + | chr5.2:68705677-68705696 | MS.gene59234:CDS | 35.0% | |
AATTGTGTTATGAGAGACAC+CGG | - | chr5.2:68706117-68706136 | None:intergenic | 35.0% | |
ATACAGGTAGTGACATTGTT+TGG | + | chr5.2:68705761-68705780 | MS.gene59234:CDS | 35.0% | |
ATACCGTATATCTTAGTTGG+AGG | - | chr5.2:68705736-68705755 | None:intergenic | 35.0% | |
ATATACGGTATTGCTGATAC+AGG | + | chr5.2:68705745-68705764 | MS.gene59234:CDS | 35.0% | |
ATCAACTGTAATCCCTGATA+GGG | + | chr5.2:68705678-68705697 | MS.gene59234:CDS | 35.0% | |
ATCCGAAGTCTATACTAACT+TGG | + | chr5.2:68706416-68706435 | MS.gene59234:CDS | 35.0% | |
CTTGGCTCAACAAAATTTGT+TGG | + | chr5.2:68706671-68706690 | MS.gene59234:CDS | 35.0% | |
GATTAAAAATGGGAGTGGTT+TGG | - | chr5.2:68705819-68705838 | None:intergenic | 35.0% | |
GCAATACCGTATATCTTAGT+TGG | - | chr5.2:68705739-68705758 | None:intergenic | 35.0% | |
GTGTCTCTCATAACACAATT+GGG | + | chr5.2:68706117-68706136 | MS.gene59234:CDS | 35.0% | |
TACCGTATATCTTAGTTGGA+GGG | - | chr5.2:68705735-68705754 | None:intergenic | 35.0% | |
TATGTCATGACGTATTCAGT+TGG | + | chr5.2:68705706-68705725 | MS.gene59234:CDS | 35.0% | |
TCGTGCCAATCATTTCTTTA+AGG | + | chr5.2:68705633-68705652 | MS.gene59234:CDS | 35.0% | |
TGGTTGTAACATTGTTCACA+AGG | - | chr5.2:68705799-68705818 | None:intergenic | 35.0% | |
TTTGACTCCTTGTTCAACAA+TGG | - | chr5.2:68706180-68706199 | None:intergenic | 35.0% | |
! | GGTTTGTAGTATGGTGATTT+TGG | - | chr5.2:68705562-68705581 | None:intergenic | 35.0% |
! | TTCTTTAAGGATTCTGACTC+AGG | + | chr5.2:68705646-68705665 | MS.gene59234:CDS | 35.0% |
! | TTTTCGGTAGGTTTGTAGTA+TGG | - | chr5.2:68705571-68705590 | None:intergenic | 35.0% |
!! | GCTCAACAAAATTTGTTGGT+TGG | + | chr5.2:68706675-68706694 | MS.gene59234:CDS | 35.0% |
!! | TGATGGATTAAAAATGGGAG+TGG | - | chr5.2:68705824-68705843 | None:intergenic | 35.0% |
!! | TTTTCTCATGCTCTAAGCAA+TGG | + | chr5.2:68705505-68705524 | MS.gene59234:CDS | 35.0% |
!!! | GGAGAGTCTTTTTTTACTAG+AGG | - | chr5.2:68706267-68706286 | None:intergenic | 35.0% |
ACACAATTGGGATCGTCAAT+TGG | + | chr5.2:68706129-68706148 | MS.gene59234:CDS | 40.0% | |
ACCCCTCCAACTAAGATATA+CGG | + | chr5.2:68705730-68705749 | MS.gene59234:CDS | 40.0% | |
ACCGTATATCTTAGTTGGAG+GGG | - | chr5.2:68705734-68705753 | None:intergenic | 40.0% | |
ACCTTTGTTCCAATTGCTGA+GGG | + | chr5.2:68706591-68706610 | MS.gene59234:CDS | 40.0% | |
AGGAAATGAAACAGGACTTC+CGG | - | chr5.2:68706013-68706032 | None:intergenic | 40.0% | |
CAAACAATACCCTCAGCAAT+TGG | - | chr5.2:68706603-68706622 | None:intergenic | 40.0% | |
CCTAAAACTGTGATAGGATG+TGG | + | chr5.2:68706030-68706049 | MS.gene59234:CDS | 40.0% | |
GAAATGATTGGCACGATTGA+TGG | - | chr5.2:68705629-68705648 | None:intergenic | 40.0% | |
GGAGATTATTCACATTCACG+AGG | + | chr5.2:68705949-68705968 | MS.gene59234:CDS | 40.0% | |
GGTGTCTCTCATAACACAAT+TGG | + | chr5.2:68706116-68706135 | MS.gene59234:CDS | 40.0% | |
TACCTTTGTTCCAATTGCTG+AGG | + | chr5.2:68706590-68706609 | MS.gene59234:CDS | 40.0% | |
TACGCTTTGGTACAATCAGT+AGG | - | chr5.2:68706735-68706754 | None:intergenic | 40.0% | |
TACTAACTTGGAATCAGCTG+TGG | + | chr5.2:68706428-68706447 | MS.gene59234:CDS | 40.0% | |
TCAACTGTAATCCCTGATAG+GGG | + | chr5.2:68705679-68705698 | MS.gene59234:CDS | 40.0% | |
! | CATAGGCCGAATTGTTGATT+AGG | - | chr5.2:68706486-68706505 | None:intergenic | 40.0% |
! | CCACATCCTATCACAGTTTT+AGG | - | chr5.2:68706033-68706052 | None:intergenic | 40.0% |
! | GCGACAAGTATACTCAGTTT+TGG | + | chr5.2:68706201-68706220 | MS.gene59234:CDS | 40.0% |
! | TCAGGGATTACAGTTGATTC+AGG | - | chr5.2:68705676-68705695 | None:intergenic | 40.0% |
!! | AGAATTTTGGTCACTGCAAG+AGG | - | chr5.2:68705908-68705927 | None:intergenic | 40.0% |
!! | ATCGGCACCTTTAAAATGTG+CGG | - | chr5.2:68706550-68706569 | None:intergenic | 40.0% |
!! | TAGTGTTGACACTCTTGCAT+TGG | + | chr5.2:68705978-68705997 | MS.gene59234:CDS | 40.0% |
!! | TTTGGTGCCATTGTTGAACA+AGG | + | chr5.2:68706170-68706189 | MS.gene59234:CDS | 40.0% |
AAATGAAACAGGACTTCCGG+AGG | - | chr5.2:68706010-68706029 | None:intergenic | 45.0% | |
ACCCTCAGCAATTGGAACAA+AGG | - | chr5.2:68706595-68706614 | None:intergenic | 45.0% | |
ATGACATAACCACCCCTATC+AGG | - | chr5.2:68705694-68705713 | None:intergenic | 45.0% | |
CAATTGGGATCGTCAATTGG+TGG | + | chr5.2:68706132-68706151 | MS.gene59234:CDS | 45.0% | |
GAATTTGGAGGCTCTTCAGA+AGG | + | chr5.2:68706339-68706358 | MS.gene59234:CDS | 45.0% | |
TAACTTGGAATCAGCTGTGG+CGG | + | chr5.2:68706431-68706450 | MS.gene59234:CDS | 45.0% | |
TGACATAACCACCCCTATCA+GGG | - | chr5.2:68705693-68705712 | None:intergenic | 45.0% | |
TGACATAGCTTAGACGCACA+AGG | - | chr5.2:68705871-68705890 | None:intergenic | 45.0% | |
TTGAGCCAAGTTCCCAAAGA+TGG | - | chr5.2:68706661-68706680 | None:intergenic | 45.0% | |
! | GATGTGGAACTGATAATGCC+GGG | + | chr5.2:68706046-68706065 | MS.gene59234:CDS | 45.0% |
! | GGATGTGGAACTGATAATGC+CGG | + | chr5.2:68706045-68706064 | MS.gene59234:CDS | 45.0% |
! | TCTTCAGAAGGTGGTGATGA+AGG | + | chr5.2:68706351-68706370 | MS.gene59234:CDS | 45.0% |
! | TGGTTCCATCTTTGGGAACT+TGG | + | chr5.2:68706653-68706672 | MS.gene59234:CDS | 45.0% |
!! | ATGGTGATTTTGGGGAGTCA+CGG | - | chr5.2:68705552-68705571 | None:intergenic | 45.0% |
!! | CTCGACTTGGTTCCATCTTT+GGG | + | chr5.2:68706646-68706665 | MS.gene59234:CDS | 45.0% |
ACTGTAATCCCTGATAGGGG+TGG | + | chr5.2:68705682-68705701 | MS.gene59234:CDS | 50.0% | |
CAACCATCATCTGCTCGACT+TGG | + | chr5.2:68706633-68706652 | MS.gene59234:CDS | 50.0% | |
GAACCAAGTCGAGCAGATGA+TGG | - | chr5.2:68706639-68706658 | None:intergenic | 50.0% | |
TTTGGAGGCTCTTCAGAAGG+TGG | + | chr5.2:68706342-68706361 | MS.gene59234:CDS | 50.0% | |
! | ACTGATAATGCCGGGACGTT+TGG | + | chr5.2:68706054-68706073 | MS.gene59234:CDS | 50.0% |
! | AGCTCTGGTATAGTTGGCCT+TGG | + | chr5.2:68706084-68706103 | MS.gene59234:CDS | 50.0% |
! | CAAGTCGAGCAGATGATGGT+TGG | - | chr5.2:68706635-68706654 | None:intergenic | 50.0% |
! | GTGCTGCATCGACAAAGTGT+TGG | - | chr5.2:68705600-68705619 | None:intergenic | 50.0% |
!! | GCTCGACTTGGTTCCATCTT+TGG | + | chr5.2:68706645-68706664 | MS.gene59234:CDS | 50.0% |
!! | TCTGGTATAGTTGGCCTTGG+AGG | + | chr5.2:68706087-68706106 | MS.gene59234:CDS | 50.0% |
CTTGCATTGGAGTCCACCTC+CGG | + | chr5.2:68705991-68706010 | MS.gene59234:CDS | 55.0% | |
GATAATGCCGGGACGTTTGG+AGG | + | chr5.2:68706057-68706076 | MS.gene59234:CDS | 55.0% | |
TGAAACAGGACTTCCGGAGG+TGG | - | chr5.2:68706007-68706026 | None:intergenic | 55.0% | |
TGGAGATGCCGCTGTGGTTT+CGG | + | chr5.2:68706221-68706240 | MS.gene59234:CDS | 55.0% | |
! | GGCGCAAGCTCTGGTATAGT+TGG | + | chr5.2:68706078-68706097 | MS.gene59234:CDS | 55.0% |
!! | GGAATCAGCTGTGGCGGATT+CGG | + | chr5.2:68706437-68706456 | MS.gene59234:CDS | 55.0% |
!! | GGTATAGTTGGCCTTGGAGG+CGG | + | chr5.2:68706090-68706109 | MS.gene59234:CDS | 55.0% |
!! | GTATAGTTGGCCTTGGAGGC+GGG | + | chr5.2:68706091-68706110 | MS.gene59234:CDS | 55.0% |
!! | GTGATTTTGGGGAGTCACGG+TGG | - | chr5.2:68705549-68705568 | None:intergenic | 55.0% |
!!! | CAGTTTTGGAGATGCCGCTG+TGG | + | chr5.2:68706215-68706234 | MS.gene59234:CDS | 55.0% |
ACCGTCACCCGAAACCACAG+CGG | - | chr5.2:68706232-68706251 | None:intergenic | 60.0% | |
GGAGATGCCGCTGTGGTTTC+GGG | + | chr5.2:68706222-68706241 | MS.gene59234:CDS | 60.0% | |
! | ACGTTTGGAGGCGCAAGCTC+TGG | + | chr5.2:68706069-68706088 | MS.gene59234:CDS | 60.0% |
GCTTGCGCCTCCAAACGTCC+CGG | - | chr5.2:68706067-68706086 | None:intergenic | 65.0% | |
! | GCCGCTGTGGTTTCGGGTGA+CGG | + | chr5.2:68706228-68706247 | MS.gene59234:CDS | 65.0% |
!! | AGTTGGCCTTGGAGGCGGGC+CGG | + | chr5.2:68706095-68706114 | MS.gene59234:CDS | 70.0% |
GAGACACCGGCCCGCCTCCA+AGG | - | chr5.2:68706104-68706123 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 68705448 | 68706755 | 68705448 | ID=MS.gene59234 |
chr5.2 | mRNA | 68705448 | 68706755 | 68705448 | ID=MS.gene59234.t1;Parent=MS.gene59234 |
chr5.2 | exon | 68705448 | 68706755 | 68705448 | ID=MS.gene59234.t1.exon1;Parent=MS.gene59234.t1 |
chr5.2 | CDS | 68705448 | 68706755 | 68705448 | ID=cds.MS.gene59234.t1;Parent=MS.gene59234.t1 |
Gene Sequence |
Protein sequence |