AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59519


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59519.t1 MTR_8g027450 99.174 969 8 0 1 969 1 969 0.0 1972
MS.gene59519.t1 MTR_6g051660 74.829 731 182 2 1 729 1 731 0.0 1077
MS.gene59519.t1 MTR_7g021500 26.400 250 157 7 18 262 13 240 3.42e-14 77.8
MS.gene59519.t1 MTR_7g021500 26.400 250 157 7 18 262 13 240 3.69e-14 77.8
MS.gene59519.t1 MTR_0010s0220 33.835 133 83 2 6 133 7 139 1.20e-11 69.3
MS.gene59519.t1 MTR_1g116957 25.911 247 160 5 18 262 11 236 2.39e-11 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59519.t1 AT2G46520 68.351 970 300 3 1 965 1 968 0.0 1405
MS.gene59519.t1 AT3G59020 26.190 252 159 6 19 265 15 244 7.72e-15 80.1
MS.gene59519.t1 AT3G59020 26.087 253 160 6 18 265 14 244 8.69e-15 79.7
MS.gene59519.t1 AT2G31660 27.848 237 141 6 19 246 15 230 5.09e-14 77.4
MS.gene59519.t1 AT1G26170 21.326 558 337 14 6 511 5 512 5.04e-13 73.9

Find 247 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAATGAGGAGGAGTTTA+AGG 0.075617 8.1:+74724058 MS.gene59519:CDS
GATATTCAGTTCACTGTTTC+TGG 0.091376 8.1:+74725570 MS.gene59519:CDS
CGCCACTGGGTTTGCATTAA+AGG 0.093051 8.1:-74724459 None:intergenic
TCGGCGTGGCGGCGGGGTTC+AGG 0.167402 8.1:-74723267 None:intergenic
CGCCTTATGTTTCTCACATT+TGG 0.169130 8.1:+74725488 MS.gene59519:CDS
CTTGCTGTGTGGACTTTGTT+AGG 0.222365 8.1:+74724101 MS.gene59519:CDS
CAAGGATTGTGCGATATATT+TGG 0.232980 8.1:+74724493 MS.gene59519:CDS
CCGAATCTTAAGCTGATTAC+TGG 0.249866 8.1:+74725679 MS.gene59519:CDS
TTGTGAGTCTCCAGTACTTC+TGG 0.252989 8.1:+74725747 MS.gene59519:CDS
ATCCTGCAGCTTCTGCATCC+TGG 0.258895 8.1:+74725770 MS.gene59519:CDS
TGAGAATATTAATCTTTATA+TGG 0.266958 8.1:+74724034 MS.gene59519:CDS
TTCAGACTCTGGTAGCTTAA+AGG 0.277195 8.1:-74724885 None:intergenic
TTCTGCATCCTGGGGTAAAA+TGG 0.284025 8.1:+74725780 MS.gene59519:CDS
CAGCTTTGTGCACAGTTCCC+TGG 0.284744 8.1:+74725994 MS.gene59519:CDS
CGAATTTGCATTGAGGGGTT+GGG 0.285078 8.1:+74724977 MS.gene59519:CDS
GCCTTATGTTTCTCACATTT+GGG 0.308273 8.1:+74725489 MS.gene59519:CDS
TATCTGGAAGGAGGTCTTCT+TGG 0.318596 8.1:-74725933 None:intergenic
TCCCCTTGGCTGATCTCATT+TGG 0.319827 8.1:-74725349 None:intergenic
AGAAGCGAGGGCCATGATTT+GGG 0.321584 8.1:-74723564 None:intergenic
TTGCTCTTGTGGATGAGCTT+AGG 0.321661 8.1:+74724000 MS.gene59519:CDS
TGAATCATATTGAGTATATT+AGG 0.323794 8.1:+74724306 MS.gene59519:CDS
TCCTGCAGCTTCTGCATCCT+GGG 0.325044 8.1:+74725771 MS.gene59519:CDS
TGGCGGCGGGGTTCAGGGAG+AGG 0.333918 8.1:-74723261 None:intergenic
TTCATCAGCATTGAGAAAAC+TGG 0.336053 8.1:-74724848 None:intergenic
AAGAAGCGAGGGCCATGATT+TGG 0.336122 8.1:-74723565 None:intergenic
AAAAGCGGTTTAAGAGTTTC+CGG 0.343454 8.1:-74723825 None:intergenic
TTGTCCTTCCAATTCGCCAC+TGG 0.346787 8.1:-74724473 None:intergenic
AGTCACAGAAATTGTGTTGT+AGG 0.352604 8.1:+74723850 MS.gene59519:CDS
ATCATGGCCCTCGCTTCTTC+CGG 0.357089 8.1:+74723569 MS.gene59519:CDS
GGAAGCATTCGGAGAGGAAT+TGG 0.359953 8.1:-74723224 None:intergenic
GATTGCTTGTGAGTTGCTTA+AGG 0.364735 8.1:+74724367 MS.gene59519:CDS
AGCTTTGTGCACAGTTCCCT+GGG 0.366805 8.1:+74725995 MS.gene59519:CDS
ATGCAAACCCAGTGGCGAAT+TGG 0.370698 8.1:+74724465 MS.gene59519:CDS
GTATTGTGACACTTCTTTCT+CGG 0.370722 8.1:+74725809 MS.gene59519:CDS
CTACTGACTCAAACAGATAA+TGG 0.371221 8.1:-74725048 None:intergenic
CATAGTTTGTTTGCGGCTGA+TGG 0.372323 8.1:+74724206 MS.gene59519:CDS
TCGTGACCAGCTTGCGGTTA+CGG 0.373029 8.1:+74724145 MS.gene59519:CDS
TCCCGGGGATCATTGATATC+TGG 0.374539 8.1:-74725949 None:intergenic
AAATGTATTATGAGGGTTCT+TGG 0.376293 8.1:+74724926 MS.gene59519:CDS
ACCATTGATTGAAGCGTAAT+CGG 0.377577 8.1:-74723628 None:intergenic
TGCTCTTGTGGATGAGCTTA+GGG 0.378445 8.1:+74724001 MS.gene59519:CDS
AGAGGATTCGGCGTGGCGGC+GGG 0.379976 8.1:-74723274 None:intergenic
TGAGTATATTAGGAGGGATA+TGG 0.381340 8.1:+74724316 MS.gene59519:CDS
TCGAATTTGCATTGAGGGGT+TGG 0.382244 8.1:+74724976 MS.gene59519:CDS
AAGGGGATTGCTACGCGTTA+TGG 0.383164 8.1:+74724386 MS.gene59519:CDS
TGAAGACTAGCAACAAGTTC+CGG 0.387862 8.1:-74723588 None:intergenic
AGAGCATGAGAGGTACGATT+AGG 0.389704 8.1:-74723476 None:intergenic
AAAATCGCACTAAATATATC+AGG 0.393109 8.1:-74725640 None:intergenic
CAGGGAACTGTGCACAAAGC+TGG 0.393904 8.1:-74725993 None:intergenic
GATTATACCGCAGATTTGTC+AGG 0.398128 8.1:+74724229 MS.gene59519:CDS
TGCTGATGGTCTTGCTCTTG+TGG 0.398506 8.1:+74723989 MS.gene59519:CDS
CTTGTTGCTAGTCTTCAAAA+AGG 0.400301 8.1:+74723594 MS.gene59519:CDS
CGGCGTGGCGGCGGGGTTCA+GGG 0.404169 8.1:-74723266 None:intergenic
TCCGATTACGCTTCAATCAA+TGG 0.406354 8.1:+74723627 MS.gene59519:CDS
GCAAGGAAACGAACCAAATC+AGG 0.407252 8.1:-74724719 None:intergenic
ATGAATGGATGGGTGAGTTT+AGG 0.409263 8.1:+74723928 MS.gene59519:CDS
TGCCCTTGTGCGTCTACTCC+AGG 0.410838 8.1:+74725309 MS.gene59519:CDS
GCTTGATTTGAAGTATTGTT+TGG 0.411121 8.1:+74723716 MS.gene59519:CDS
GAGCATGAGAGGTACGATTA+GGG 0.413296 8.1:-74723475 None:intergenic
TTGCTGTGTGGACTTTGTTA+GGG 0.413943 8.1:+74724102 MS.gene59519:CDS
GAGAGGATTCGGCGTGGCGG+CGG 0.414397 8.1:-74723275 None:intergenic
GCTTTACTGACCGCCTTCTC+TGG 0.418955 8.1:-74725531 None:intergenic
TGTCCTTCCAATTCGCCACT+GGG 0.419396 8.1:-74724472 None:intergenic
TCTGCAATATCTGGCATGTC+AGG 0.421184 8.1:-74725859 None:intergenic
TAAGATTCGGAATCCAGAAC+TGG 0.422640 8.1:-74725666 None:intergenic
TCCTCCCTCAACCTCACATT+CGG 0.426403 8.1:-74724263 None:intergenic
TCAAATATCTGCATGTAGAT+TGG 0.426703 8.1:-74725241 None:intergenic
TCTCTTGAGGGGAGTGCTGA+TGG 0.427391 8.1:+74723975 MS.gene59519:CDS
GGCGGAGGAGAGAGAGGATT+CGG 0.429321 8.1:-74723286 None:intergenic
GTTAGGTTGGGAGGAGGCGG+AGG 0.429322 8.1:-74723301 None:intergenic
GAAGTTAGGTTGGGAGGAGG+CGG 0.430922 8.1:-74723304 None:intergenic
GTCAAATATGCCAAGTACTT+TGG 0.431949 8.1:-74725380 None:intergenic
GGAGGAGGCGGAGGAGAGAG+AGG 0.432967 8.1:-74723292 None:intergenic
AGGACGGCGAGGGCGAAGTT+AGG 0.434374 8.1:-74723318 None:intergenic
CGGCGAGGGCGAAGTTAGGT+TGG 0.440463 8.1:-74723314 None:intergenic
GCTAGTTATCCTTCTCTTGA+GGG 0.441696 8.1:+74723963 MS.gene59519:CDS
ATTGCTTGTGAGTTGCTTAA+GGG 0.442178 8.1:+74724368 MS.gene59519:CDS
GCTGCAGGATCCAGAAGTAC+TGG 0.443966 8.1:-74725757 None:intergenic
ATGTAATGAAATGTATTATG+AGG 0.445023 8.1:+74724918 MS.gene59519:CDS
CGTGATTCCCGATGATAGCT+AGG 0.445613 8.1:-74723536 None:intergenic
TCCTTCCAGCATTGTAAAGT+TGG 0.446082 8.1:-74725909 None:intergenic
TGTTCATCATAGTTTGTTTG+CGG 0.448923 8.1:+74724199 MS.gene59519:CDS
GGTTTAAGAGTTTCCGGTGG+TGG 0.454599 8.1:-74723819 None:intergenic
TTCGTCCAACTTTACAATGC+TGG 0.457686 8.1:+74725904 MS.gene59519:CDS
AGAGGAATTGGAGAGTTTGT+TGG 0.459131 8.1:-74723212 None:intergenic
GAATTTGCATTGAGGGGTTG+GGG 0.459250 8.1:+74724978 MS.gene59519:CDS
CCCGATGATAGCTAGGGCTT+CGG 0.461908 8.1:-74723529 None:intergenic
GGGCTTCGGAGAGCTGAGAT+TGG 0.462047 8.1:-74723515 None:intergenic
TTATTTCCAGCCGAGGGAAA+AGG 0.465603 8.1:-74725132 None:intergenic
AGAGTTTCCGGTGGTGGTGG+CGG 0.465943 8.1:-74723813 None:intergenic
TGCTAGTTATCCTTCTCTTG+AGG 0.466758 8.1:+74723962 MS.gene59519:CDS
TTGAGGATCATATGAATGAA+TGG 0.467479 8.1:+74723913 MS.gene59519:CDS
AGTTTGTTGGTTCCATTCCA+TGG 0.468298 8.1:-74723199 None:intergenic
CAGGGAGAGGAGAGAGAGTG+TGG 0.469257 8.1:-74723248 None:intergenic
CCAGTAATCAGCTTAAGATT+CGG 0.472206 8.1:-74725679 None:intergenic
TTTCTCGGCAAGAACAAGAC+AGG 0.475623 8.1:+74725824 MS.gene59519:CDS
GAGAGTGTGGAGGAAGCATT+CGG 0.480598 8.1:-74723235 None:intergenic
TGGAGTAGACGCACAAGGGC+AGG 0.484502 8.1:-74725307 None:intergenic
TCTACAAAGAAGGCTGCAAC+CGG 0.487821 8.1:+74724527 MS.gene59519:CDS
AGTAGCCGGTCTTGTGAAGC+GGG 0.488425 8.1:+74725066 MS.gene59519:CDS
CTCAAACAGATAATGGTTGA+AGG 0.488910 8.1:-74725041 None:intergenic
AGTGCACCTGCCTTAAGCAT+TGG 0.489711 8.1:-74724638 None:intergenic
GTTGCTCGAATTTGCATTGA+GGG 0.490878 8.1:+74724971 MS.gene59519:CDS
AAGATCTGTGGAGACATAAC+CGG 0.495143 8.1:-74724546 None:intergenic
AGCAGCGCTGTCTGATTCAC+AGG 0.498502 8.1:-74726051 None:intergenic
TTAAGAGTTTCCGGTGGTGG+TGG 0.501267 8.1:-74723816 None:intergenic
CTTTGGTCAGTCTATCCCCT+TGG 0.503293 8.1:-74725363 None:intergenic
ATCACGATTTCCCCAAATCA+TGG 0.503511 8.1:+74723553 MS.gene59519:CDS
TGGAGACTCACAAATGAGTC+TGG 0.504113 8.1:-74725737 None:intergenic
TGCATGTAGATTGGTGGGAT+GGG 0.505019 8.1:-74725232 None:intergenic
CCCAATCCTCGATTCCGAAA+AGG 0.505753 8.1:+74723440 MS.gene59519:CDS
GAATGAGTATCCAATGCTTA+AGG 0.506930 8.1:+74724628 MS.gene59519:CDS
TGAGAAACTCTTAATAGTAA+AGG 0.508710 8.1:+74724784 MS.gene59519:CDS
AGGGAACTGTGCACAAAGCT+GGG 0.510033 8.1:-74725992 None:intergenic
GCATCAAGCACTTCTGATCA+AGG 0.510248 8.1:+74725415 MS.gene59519:CDS
TGTGGATGAGCTTAGGGCTG+CGG 0.511547 8.1:+74724007 MS.gene59519:CDS
GGCGAGGGCGAAGTTAGGTT+GGG 0.516568 8.1:-74723313 None:intergenic
ACAGATAATGGTTGAAGGTG+GGG 0.520696 8.1:-74725036 None:intergenic
ATGACTTGAGGGAACCTCCC+AGG 0.521093 8.1:-74726012 None:intergenic
ATAGTTTGTTTGCGGCTGAT+GGG 0.521781 8.1:+74724207 MS.gene59519:CDS
CCAGATATTGCAGAAAATGT+AGG 0.524692 8.1:+74725868 MS.gene59519:CDS
CATTTGCAGTGATGACTTGA+GGG 0.527183 8.1:-74726023 None:intergenic
CCGAAGCCCTAGCTATCATC+GGG 0.527980 8.1:+74723529 MS.gene59519:CDS
CCCCAGGATGCAGAAGCTGC+AGG 0.528376 8.1:-74725772 None:intergenic
TCCGAAGCCCTAGCTATCAT+CGG 0.530404 8.1:+74723528 MS.gene59519:CDS
TTCCAGATATCAATGATCCC+CGG 0.532440 8.1:+74725947 MS.gene59519:CDS
ACAGCAGCCGCCACCACCAC+CGG 0.532576 8.1:+74723806 MS.gene59519:CDS
GACGAGACGGAGGACGGCGA+GGG 0.536397 8.1:-74723328 None:intergenic
ACTCCAGGCCTTCCTTCAAA+AGG 0.538342 8.1:+74725324 MS.gene59519:CDS
TCACTGTTTCTGGTTAAGCA+TGG 0.538604 8.1:+74725580 MS.gene59519:CDS
AACAGATAATGGTTGAAGGT+GGG 0.538694 8.1:-74725037 None:intergenic
GGTCTCTCTTTCTACAAAGA+AGG 0.540099 8.1:+74724517 MS.gene59519:CDS
TCTTTATATGGAGAAGAATG+AGG 0.540847 8.1:+74724046 MS.gene59519:CDS
GATAGACTGACCAAAGTACT+TGG 0.541303 8.1:+74725370 MS.gene59519:CDS
AGTTGACGGCAGCGGCTTGA+CGG 0.542493 8.1:-74723377 None:intergenic
CTGCATGTAGATTGGTGGGA+TGG 0.546010 8.1:-74725233 None:intergenic
GCCCAAATGTGAGAAACATA+AGG 0.547648 8.1:-74725490 None:intergenic
TAGTAAAGGACGAGGGTGGA+AGG 0.547675 8.1:+74724798 MS.gene59519:CDS
AACTAATGCTCGGTTGTAAG+TGG 0.547807 8.1:-74726085 None:intergenic
GGATCATATGAATGAATGGA+TGG 0.549813 8.1:+74723917 MS.gene59519:CDS
ATGTAGATTGGTGGGATGGG+TGG 0.550873 8.1:-74725229 None:intergenic
TCCAGATATCAATGATCCCC+GGG 0.552430 8.1:+74725948 MS.gene59519:CDS
GCAAGCAACTGAAATGCGTA+CGG 0.556110 8.1:-74725184 None:intergenic
ACATTTGCAGTGATGACTTG+AGG 0.556182 8.1:-74726024 None:intergenic
GGTTATCTTCAGCGGACCAA+CGG 0.558438 8.1:-74723419 None:intergenic
AATATCTGCATGTAGATTGG+TGG 0.558745 8.1:-74725238 None:intergenic
TACTGATTCTCTTCAGACTC+TGG 0.561195 8.1:-74724896 None:intergenic
TTGCTTGTGAGTTGCTTAAG+GGG 0.562415 8.1:+74724369 MS.gene59519:CDS
CAGTAGCCGGTCTTGTGAAG+CGG 0.563321 8.1:+74725065 MS.gene59519:CDS
TGATTCCGAATGTGAGGTTG+AGG 0.563458 8.1:+74724258 MS.gene59519:CDS
TGTAATGAAATGTATTATGA+GGG 0.564921 8.1:+74724919 MS.gene59519:CDS
CGGACCAACGGAGACGGAGG+TGG 0.565978 8.1:-74723407 None:intergenic
GGCGAAGTTAGGTTGGGAGG+AGG 0.567027 8.1:-74723307 None:intergenic
ACGGATCTGATCGGAGATGG+AGG 0.567473 8.1:-74723358 None:intergenic
TTGACGGATCTGATCGGAGA+TGG 0.567532 8.1:-74723361 None:intergenic
TGTGAAGCGGGCTTCTGAGA+GGG 0.568121 8.1:+74725078 MS.gene59519:CDS
GAGGGTGGAAGGCTACGTTA+TGG 0.569194 8.1:+74724809 MS.gene59519:CDS
GAGTATCCAATGCTTAAGGC+AGG 0.575297 8.1:+74724632 MS.gene59519:CDS
CTAGTTATCCTTCTCTTGAG+GGG 0.575908 8.1:+74723964 MS.gene59519:CDS
TATCTGTTTGAGTCAGTAGC+CGG 0.575956 8.1:+74725052 MS.gene59519:CDS
AGAACAAGACAGGGTTGAGG+AGG 0.576975 8.1:+74725834 MS.gene59519:CDS
ATTATACCGCAGATTTGTCA+GGG 0.577085 8.1:+74724230 MS.gene59519:CDS
TCGCACTAAATATATCAGGC+TGG 0.577096 8.1:-74725636 None:intergenic
GGATTGTGCGATATATTTGG+TGG 0.577400 8.1:+74724496 MS.gene59519:CDS
TTCAGCGACGAGACGGAGGA+CGG 0.581545 8.1:-74723334 None:intergenic
TATCAAAAGAAGTAGCATTG+AGG 0.583401 8.1:+74724690 MS.gene59519:CDS
ATCGCACATTCACCATGGAA+TGG 0.583806 8.1:+74723187 None:intergenic
AGAAGCCCGCTTCACAAGAC+CGG 0.584077 8.1:-74725071 None:intergenic
ATCATATTGAGTATATTAGG+AGG 0.584593 8.1:+74724309 MS.gene59519:CDS
AATTTCTGTGACTCGAAAAG+CGG 0.584834 8.1:-74723840 None:intergenic
GAAGCGAGGGCCATGATTTG+GGG 0.585140 8.1:-74723563 None:intergenic
TTTGGTTCGTTTCCTTGCTG+CGG 0.587294 8.1:+74724724 MS.gene59519:CDS
CGCGTCGTTGATTGACGCTG+CGG 0.589913 8.1:+74723779 MS.gene59519:CDS
GAGGATTCGGCGTGGCGGCG+GGG 0.590284 8.1:-74723273 None:intergenic
CGACGAGACGGAGGACGGCG+AGG 0.590663 8.1:-74723329 None:intergenic
GAGGTTGAGGGAGGATGATG+AGG 0.591211 8.1:+74724271 MS.gene59519:CDS
TGCATCCTGGGGTAAAATGG+TGG 0.591851 8.1:+74725783 MS.gene59519:CDS
TAATTGCCGTAACCGCAAGC+TGG 0.592087 8.1:-74724151 None:intergenic
TCAGCACTCCCCTCAAGAGA+AGG 0.592983 8.1:-74723972 None:intergenic
AGGCCTGGAGTAGACGCACA+AGG 0.593702 8.1:-74725312 None:intergenic
AAACAGATAATGGTTGAAGG+TGG 0.595794 8.1:-74725038 None:intergenic
AACTTACTCAAACTAATGCT+CGG 0.596616 8.1:-74726095 None:intergenic
TGACTTGAGGGAACCTCCCA+GGG 0.597802 8.1:-74726011 None:intergenic
GACAGTATTATTTCCAGCCG+AGG 0.598753 8.1:-74725139 None:intergenic
AACAAGTTCCGGAAGAAGCG+AGG 0.599510 8.1:-74723577 None:intergenic
GGAGAGGAGAGAGAGTGTGG+AGG 0.600742 8.1:-74723245 None:intergenic
TGGAGGGTTCAGCGACGAGA+CGG 0.603655 8.1:-74723341 None:intergenic
ACAAGTTCCGGAAGAAGCGA+GGG 0.604193 8.1:-74723576 None:intergenic
GTGATCTTGATACACGGAGG+AGG 0.604260 8.1:+74724345 MS.gene59519:CDS
CGGATCTGATCGGAGATGGA+GGG 0.605850 8.1:-74723357 None:intergenic
TTCTCGGCAAGAACAAGACA+GGG 0.608184 8.1:+74725825 MS.gene59519:CDS
TTAGAGAGCTCCAGAGAAGG+CGG 0.608254 8.1:+74725521 MS.gene59519:CDS
TCATATTGAGTATATTAGGA+GGG 0.608345 8.1:+74724310 MS.gene59519:CDS
GCACCAAATGAGATCAGCCA+AGG 0.608644 8.1:+74725346 MS.gene59519:CDS
AGCGGCTTGACGGATCTGAT+CGG 0.609749 8.1:-74723367 None:intergenic
TATATTAGGAGGGATATGGA+AGG 0.611021 8.1:+74724320 MS.gene59519:CDS
TTGGTGGCGGAGAGCATGAG+AGG 0.615233 8.1:-74723486 None:intergenic
AAAACCACCTCCGTCTCCGT+TGG 0.615604 8.1:+74723403 MS.gene59519:CDS
TTGTGAAGCGGGCTTCTGAG+AGG 0.615980 8.1:+74725077 MS.gene59519:CDS
TGTTGCTCGAATTTGCATTG+AGG 0.616016 8.1:+74724970 MS.gene59519:CDS
ACTAAATATATCAGGCTGGA+CGG 0.616909 8.1:-74725632 None:intergenic
CAAGCAACTGAAATGCGTAC+GGG 0.617540 8.1:-74725183 None:intergenic
ACTCTTAATAGTAAAGGACG+AGG 0.618274 8.1:+74724790 MS.gene59519:CDS
AAACCCAGTGGCGAATTGGA+AGG 0.619166 8.1:+74724469 MS.gene59519:CDS
GATTCCGAATGTGAGGTTGA+GGG 0.620733 8.1:+74724259 MS.gene59519:CDS
CTTCAGCGGACCAACGGAGA+CGG 0.622307 8.1:-74723413 None:intergenic
CACCAAATGAGATCAGCCAA+GGG 0.623350 8.1:+74725347 MS.gene59519:CDS
ATTGTAAAGTTGGACGAAGG+TGG 0.623656 8.1:-74725899 None:intergenic
ATATCTGCATGTAGATTGGT+GGG 0.627188 8.1:-74725237 None:intergenic
TTGAACATCAACAAGATCTG+TGG 0.627448 8.1:-74724558 None:intergenic
GAGGATTGGGTTATCTTCAG+CGG 0.631308 8.1:-74723427 None:intergenic
ACAGTATTATTTCCAGCCGA+GGG 0.631750 8.1:-74725138 None:intergenic
TTTGTGCACAGTTCCCTGGG+AGG 0.632283 8.1:+74725998 MS.gene59519:CDS
TCCAACTTTACAATGCTGGA+AGG 0.632984 8.1:+74725908 MS.gene59519:CDS
CCTGCAGCTTCTGCATCCTG+GGG 0.635126 8.1:+74725772 MS.gene59519:CDS
GTGATTCCCGATGATAGCTA+GGG 0.638935 8.1:-74723535 None:intergenic
CAGCGGACCAACGGAGACGG+AGG 0.640762 8.1:-74723410 None:intergenic
GACTAGTCGTGACCAGCTTG+CGG 0.643562 8.1:+74724139 MS.gene59519:CDS
AAGATTCGGAATCCAGAACT+GGG 0.643798 8.1:-74725665 None:intergenic
TTAATAGTAAAGGACGAGGG+TGG 0.644139 8.1:+74724794 MS.gene59519:CDS
TTGCTCGAATTTGCATTGAG+GGG 0.644156 8.1:+74724972 MS.gene59519:CDS
GCAAGAACAAGACAGGGTTG+AGG 0.647585 8.1:+74725831 MS.gene59519:CDS
CAACATTTGACTCCGCAGCA+AGG 0.650912 8.1:-74724736 None:intergenic
GGCCTGGAGTAGACGCACAA+GGG 0.654528 8.1:-74725311 None:intergenic
TTATATGGAGAAGAATGAGG+AGG 0.657740 8.1:+74724049 MS.gene59519:CDS
TGAATATCAAGAGAGACTTG+AGG 0.658051 8.1:-74725555 None:intergenic
GATCATATGAATGAATGGAT+GGG 0.659145 8.1:+74723918 MS.gene59519:CDS
GGGGATCATTGATATCTGGA+AGG 0.661688 8.1:-74725945 None:intergenic
AGCATTGTAAAGTTGGACGA+AGG 0.671018 8.1:-74725902 None:intergenic
GATCATTGATATCTGGAAGG+AGG 0.672746 8.1:-74725942 None:intergenic
AGGGTTCAGCGACGAGACGG+AGG 0.675337 8.1:-74723338 None:intergenic
AGAGAGAGGATTCGGCGTGG+CGG 0.684559 8.1:-74723278 None:intergenic
TTATACCGCAGATTTGTCAG+GGG 0.685030 8.1:+74724231 MS.gene59519:CDS
TGTGGAGGAAGCATTCGGAG+AGG 0.686501 8.1:-74723230 None:intergenic
GGATTGTGATTCCGAATGTG+AGG 0.687428 8.1:+74724252 MS.gene59519:CDS
TTCCTTTAATGCAAACCCAG+TGG 0.692397 8.1:+74724457 MS.gene59519:CDS
CGCAGCGTCAATCAACGACG+CGG 0.696713 8.1:-74723778 None:intergenic
TCCGAATGTGAGGTTGAGGG+AGG 0.708339 8.1:+74724262 MS.gene59519:CDS
ACAATCCCCTGACAAATCTG+CGG 0.710797 8.1:-74724236 None:intergenic
AAGGTAGTGATCTTGATACA+CGG 0.712937 8.1:+74724339 MS.gene59519:CDS
CTCTTAATAGTAAAGGACGA+GGG 0.713370 8.1:+74724791 MS.gene59519:CDS
AGTGGCGAATTGGAAGGACA+AGG 0.714527 8.1:+74724475 MS.gene59519:CDS
ACCAAATGAGATCAGCCAAG+GGG 0.717940 8.1:+74725348 MS.gene59519:CDS
AGCGGTTTAAGAGTTTCCGG+TGG 0.723807 8.1:-74723822 None:intergenic
AGGAGAGAGAGGATTCGGCG+TGG 0.725402 8.1:-74723281 None:intergenic
GAGGGCGAAGTTAGGTTGGG+AGG 0.730306 8.1:-74723310 None:intergenic
GTAGTGATCTTGATACACGG+AGG 0.803505 8.1:+74724342 MS.gene59519:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAGAATATTAATCTTTATA+TGG + chr8.1:74724034-74724053 MS.gene59519:CDS 15.0%
!! ATGTAATGAAATGTATTATG+AGG + chr8.1:74724918-74724937 MS.gene59519:CDS 20.0%
!! TGAATCATATTGAGTATATT+AGG + chr8.1:74724306-74724325 MS.gene59519:CDS 20.0%
!! TGTAATGAAATGTATTATGA+GGG + chr8.1:74724919-74724938 MS.gene59519:CDS 20.0%
! AAAATCGCACTAAATATATC+AGG - chr8.1:74725643-74725662 None:intergenic 25.0%
! ATCATATTGAGTATATTAGG+AGG + chr8.1:74724309-74724328 MS.gene59519:CDS 25.0%
! ATGAAGAAACAAAAAATTCC+CGG - chr8.1:74725969-74725988 None:intergenic 25.0%
! GAAAAATTCAGTTACATCAT+TGG - chr8.1:74725164-74725183 None:intergenic 25.0%
! TCATATTGAGTATATTAGGA+GGG + chr8.1:74724310-74724329 MS.gene59519:CDS 25.0%
! TGAGAAACTCTTAATAGTAA+AGG + chr8.1:74724784-74724803 MS.gene59519:CDS 25.0%
! TTTCTTAAAAATCGAATTCG+CGG - chr8.1:74723664-74723683 None:intergenic 25.0%
!!! CTTCTTTTGATATTTGAGAT+CGG - chr8.1:74724682-74724701 None:intergenic 25.0%
!!! GGAATTTTTTGTTTCTTCAT+TGG + chr8.1:74725969-74725988 MS.gene59519:CDS 25.0%
AAATGTATTATGAGGGTTCT+TGG + chr8.1:74724926-74724945 MS.gene59519:CDS 30.0%
ATATGATCCTCAAAAAACTC+AGG - chr8.1:74723906-74723925 None:intergenic 30.0%
GATCATATGAATGAATGGAT+GGG + chr8.1:74723918-74723937 MS.gene59519:CDS 30.0%
TATCAAAAGAAGTAGCATTG+AGG + chr8.1:74724690-74724709 MS.gene59519:CDS 30.0%
TCAAATATCTGCATGTAGAT+TGG - chr8.1:74725244-74725263 None:intergenic 30.0%
TCTTTATATGGAGAAGAATG+AGG + chr8.1:74724046-74724065 MS.gene59519:CDS 30.0%
TGAAGAAACAAAAAATTCCC+GGG - chr8.1:74725968-74725987 None:intergenic 30.0%
TTGAGAAAAATCTCAAGCAA+AGG - chr8.1:74723756-74723775 None:intergenic 30.0%
TTGAGGATCATATGAATGAA+TGG + chr8.1:74723913-74723932 MS.gene59519:CDS 30.0%
! ATTGAGGTTTTTACCTGATT+TGG + chr8.1:74724706-74724725 MS.gene59519:CDS 30.0%
!! GCTTGATTTGAAGTATTGTT+TGG + chr8.1:74723716-74723735 MS.gene59519:CDS 30.0%
!! TGTTCATCATAGTTTGTTTG+CGG + chr8.1:74724199-74724218 MS.gene59519:CDS 30.0%
!!! GGTTTTGATTTGTTCCTTTT+CGG - chr8.1:74723457-74723476 None:intergenic 30.0%
AAAAGCGGTTTAAGAGTTTC+CGG - chr8.1:74723828-74723847 None:intergenic 35.0%
AAGGTAGTGATCTTGATACA+CGG + chr8.1:74724339-74724358 MS.gene59519:CDS 35.0%
AATATCTGCATGTAGATTGG+TGG - chr8.1:74725241-74725260 None:intergenic 35.0%
AATTTCTGTGACTCGAAAAG+CGG - chr8.1:74723843-74723862 None:intergenic 35.0%
ACTAAATATATCAGGCTGGA+CGG - chr8.1:74725635-74725654 None:intergenic 35.0%
ACTCTTAATAGTAAAGGACG+AGG + chr8.1:74724790-74724809 MS.gene59519:CDS 35.0%
AGTCACAGAAATTGTGTTGT+AGG + chr8.1:74723850-74723869 MS.gene59519:CDS 35.0%
ATATCTGCATGTAGATTGGT+GGG - chr8.1:74725240-74725259 None:intergenic 35.0%
ATTATACCGCAGATTTGTCA+GGG + chr8.1:74724230-74724249 MS.gene59519:CDS 35.0%
ATTGCTTGTGAGTTGCTTAA+GGG + chr8.1:74724368-74724387 MS.gene59519:CDS 35.0%
CAAAAACAGACACAAGAGTT+GGG - chr8.1:74725105-74725124 None:intergenic 35.0%
CAAGGATTGTGCGATATATT+TGG + chr8.1:74724493-74724512 MS.gene59519:CDS 35.0%
CCAGATATTGCAGAAAATGT+AGG + chr8.1:74725868-74725887 MS.gene59519:CDS 35.0%
CCAGTAATCAGCTTAAGATT+CGG - chr8.1:74725682-74725701 None:intergenic 35.0%
CTCTTAATAGTAAAGGACGA+GGG + chr8.1:74724791-74724810 MS.gene59519:CDS 35.0%
GAAGAAACAAAAAATTCCCG+GGG - chr8.1:74725967-74725986 None:intergenic 35.0%
GAATGAGTATCCAATGCTTA+AGG + chr8.1:74724628-74724647 MS.gene59519:CDS 35.0%
GATATTCAGTTCACTGTTTC+TGG + chr8.1:74725570-74725589 MS.gene59519:CDS 35.0%
GCCTTATGTTTCTCACATTT+GGG + chr8.1:74725489-74725508 MS.gene59519:CDS 35.0%
GGATCATATGAATGAATGGA+TGG + chr8.1:74723917-74723936 MS.gene59519:CDS 35.0%
GTATTGTGACACTTCTTTCT+CGG + chr8.1:74725809-74725828 MS.gene59519:CDS 35.0%
GTCAAATATGCCAAGTACTT+TGG - chr8.1:74725383-74725402 None:intergenic 35.0%
TATATTAGGAGGGATATGGA+AGG + chr8.1:74724320-74724339 MS.gene59519:CDS 35.0%
TCAAAAACAGACACAAGAGT+TGG - chr8.1:74725106-74725125 None:intergenic 35.0%
TGAATATCAAGAGAGACTTG+AGG - chr8.1:74725558-74725577 None:intergenic 35.0%
TGAGTATATTAGGAGGGATA+TGG + chr8.1:74724316-74724335 MS.gene59519:CDS 35.0%
TTATATGGAGAAGAATGAGG+AGG + chr8.1:74724049-74724068 MS.gene59519:CDS 35.0%
TTGAACATCAACAAGATCTG+TGG - chr8.1:74724561-74724580 None:intergenic 35.0%
! AAACAGATAATGGTTGAAGG+TGG - chr8.1:74725041-74725060 None:intergenic 35.0%
! AACAGATAATGGTTGAAGGT+GGG - chr8.1:74725040-74725059 None:intergenic 35.0%
! ACCATTGATTGAAGCGTAAT+CGG - chr8.1:74723631-74723650 None:intergenic 35.0%
! CCTACATTTTCTGCAATATC+TGG - chr8.1:74725871-74725890 None:intergenic 35.0%
! CTCAAACAGATAATGGTTGA+AGG - chr8.1:74725044-74725063 None:intergenic 35.0%
! GGCAATTAAGTTTTTGACGA+CGG + chr8.1:74724166-74724185 MS.gene59519:CDS 35.0%
! TTCATCAGCATTGAGAAAAC+TGG - chr8.1:74724851-74724870 None:intergenic 35.0%
! TTCTTTTGTCACCTGATTCT+TGG + chr8.1:74725266-74725285 MS.gene59519:CDS 35.0%
!! CTACTGACTCAAACAGATAA+TGG - chr8.1:74725051-74725070 None:intergenic 35.0%
!! CTTGTTGCTAGTCTTCAAAA+AGG + chr8.1:74723594-74723613 MS.gene59519:CDS 35.0%
AACTAATGCTCGGTTGTAAG+TGG - chr8.1:74726088-74726107 None:intergenic 40.0%
AAGATCTGTGGAGACATAAC+CGG - chr8.1:74724549-74724568 None:intergenic 40.0%
AAGATTCGGAATCCAGAACT+GGG - chr8.1:74725668-74725687 None:intergenic 40.0%
ACAGTATTATTTCCAGCCGA+GGG - chr8.1:74725141-74725160 None:intergenic 40.0%
ACATTTGCAGTGATGACTTG+AGG - chr8.1:74726027-74726046 None:intergenic 40.0%
AGAGGAATTGGAGAGTTTGT+TGG - chr8.1:74723215-74723234 None:intergenic 40.0%
AGCATTGTAAAGTTGGACGA+AGG - chr8.1:74725905-74725924 None:intergenic 40.0%
ATCACGATTTCCCCAAATCA+TGG + chr8.1:74723553-74723572 MS.gene59519:CDS 40.0%
ATGAATGGATGGGTGAGTTT+AGG + chr8.1:74723928-74723947 MS.gene59519:CDS 40.0%
ATTGTAAAGTTGGACGAAGG+TGG - chr8.1:74725902-74725921 None:intergenic 40.0%
CATTTGCAGTGATGACTTGA+GGG - chr8.1:74726026-74726045 None:intergenic 40.0%
CCGAATCTTAAGCTGATTAC+TGG + chr8.1:74725679-74725698 MS.gene59519:CDS 40.0%
CGCCTTATGTTTCTCACATT+TGG + chr8.1:74725488-74725507 MS.gene59519:CDS 40.0%
CTAGTTATCCTTCTCTTGAG+GGG + chr8.1:74723964-74723983 MS.gene59519:CDS 40.0%
GAAGAATGAGGAGGAGTTTA+AGG + chr8.1:74724058-74724077 MS.gene59519:CDS 40.0%
GATCATTGATATCTGGAAGG+AGG - chr8.1:74725945-74725964 None:intergenic 40.0%
GATTATACCGCAGATTTGTC+AGG + chr8.1:74724229-74724248 MS.gene59519:CDS 40.0%
GATTGCTTGTGAGTTGCTTA+AGG + chr8.1:74724367-74724386 MS.gene59519:CDS 40.0%
GCCCAAATGTGAGAAACATA+AGG - chr8.1:74725493-74725512 None:intergenic 40.0%
GCTAGTTATCCTTCTCTTGA+GGG + chr8.1:74723963-74723982 MS.gene59519:CDS 40.0%
GGATTGTGCGATATATTTGG+TGG + chr8.1:74724496-74724515 MS.gene59519:CDS 40.0%
GGTCTCTCTTTCTACAAAGA+AGG + chr8.1:74724517-74724536 MS.gene59519:CDS 40.0%
GTTGCTCGAATTTGCATTGA+GGG + chr8.1:74724971-74724990 MS.gene59519:CDS 40.0%
TAAGATTCGGAATCCAGAAC+TGG - chr8.1:74725669-74725688 None:intergenic 40.0%
TATCTGTTTGAGTCAGTAGC+CGG + chr8.1:74725052-74725071 MS.gene59519:CDS 40.0%
TCCAACTTTACAATGCTGGA+AGG + chr8.1:74725908-74725927 MS.gene59519:CDS 40.0%
TCCGATTACGCTTCAATCAA+TGG + chr8.1:74723627-74723646 MS.gene59519:CDS 40.0%
TCCTTCCAGCATTGTAAAGT+TGG - chr8.1:74725912-74725931 None:intergenic 40.0%
TCGCACTAAATATATCAGGC+TGG - chr8.1:74725639-74725658 None:intergenic 40.0%
TGAAGACTAGCAACAAGTTC+CGG - chr8.1:74723591-74723610 None:intergenic 40.0%
TGCTAGTTATCCTTCTCTTG+AGG + chr8.1:74723962-74723981 MS.gene59519:CDS 40.0%
TGTTGCTCGAATTTGCATTG+AGG + chr8.1:74724970-74724989 MS.gene59519:CDS 40.0%
TTAATAGTAAAGGACGAGGG+TGG + chr8.1:74724794-74724813 MS.gene59519:CDS 40.0%
TTATACCGCAGATTTGTCAG+GGG + chr8.1:74724231-74724250 MS.gene59519:CDS 40.0%
TTCAGACTCTGGTAGCTTAA+AGG - chr8.1:74724888-74724907 None:intergenic 40.0%
TTCCAGATATCAATGATCCC+CGG + chr8.1:74725947-74725966 MS.gene59519:CDS 40.0%
TTCCTTTAATGCAAACCCAG+TGG + chr8.1:74724457-74724476 MS.gene59519:CDS 40.0%
TTCGTCCAACTTTACAATGC+TGG + chr8.1:74725904-74725923 MS.gene59519:CDS 40.0%
TTGCTCGAATTTGCATTGAG+GGG + chr8.1:74724972-74724991 MS.gene59519:CDS 40.0%
TTGCTGTGTGGACTTTGTTA+GGG + chr8.1:74724102-74724121 MS.gene59519:CDS 40.0%
TTGCTTGTGAGTTGCTTAAG+GGG + chr8.1:74724369-74724388 MS.gene59519:CDS 40.0%
! ACAGATAATGGTTGAAGGTG+GGG - chr8.1:74725039-74725058 None:intergenic 40.0%
! CTGAGATTGGATTTTGTTGG+TGG - chr8.1:74723505-74723524 None:intergenic 40.0%
! GAGCTGAGATTGGATTTTGT+TGG - chr8.1:74723508-74723527 None:intergenic 40.0%
! GATAGACTGACCAAAGTACT+TGG + chr8.1:74725370-74725389 MS.gene59519:CDS 40.0%
! TTGAAACAAGCCTTTTCCCT+CGG + chr8.1:74725122-74725141 MS.gene59519:CDS 40.0%
! TTTGTTCCTTTTCGGAATCG+AGG - chr8.1:74723449-74723468 None:intergenic 40.0%
!! AGATTGGATTTTGTTGGTGG+CGG - chr8.1:74723502-74723521 None:intergenic 40.0%
!! ATAGTTTGTTTGCGGCTGAT+GGG + chr8.1:74724207-74724226 MS.gene59519:CDS 40.0%
!! TACTGATTCTCTTCAGACTC+TGG - chr8.1:74724899-74724918 None:intergenic 40.0%
!! TCACTGTTTCTGGTTAAGCA+TGG + chr8.1:74725580-74725599 MS.gene59519:CDS 40.0%
!! TTTTTAGAGAGCTCCAGAGA+AGG + chr8.1:74725518-74725537 MS.gene59519:CDS 40.0%
!!! ACATCTGCTTTTTGCAACTC+AGG - chr8.1:74724608-74724627 None:intergenic 40.0%
!!! AGAGTTGCCTGAGTTTTTTG+AGG + chr8.1:74723896-74723915 MS.gene59519:CDS 40.0%
!!! ATGATTTTGCACTTGCTGTG+TGG + chr8.1:74724090-74724109 MS.gene59519:CDS 40.0%
!!! ATTTGGTGCCTTTTGAAGGA+AGG - chr8.1:74725335-74725354 None:intergenic 40.0%
!!! CATCTGCTTTTTGCAACTCA+GGG - chr8.1:74724607-74724626 None:intergenic 40.0%
!!! GAGGTGGTTTTTGAAGTTGA+CGG - chr8.1:74723394-74723413 None:intergenic 40.0%
!!! TCTCATTTGGTGCCTTTTGA+AGG - chr8.1:74725339-74725358 None:intergenic 40.0%
ACAATCCCCTGACAAATCTG+CGG - chr8.1:74724239-74724258 None:intergenic 45.0%
ACCAAATGAGATCAGCCAAG+GGG + chr8.1:74725348-74725367 MS.gene59519:CDS 45.0%
CAAGCAACTGAAATGCGTAC+GGG - chr8.1:74725186-74725205 None:intergenic 45.0%
CACCAAATGAGATCAGCCAA+GGG + chr8.1:74725347-74725366 MS.gene59519:CDS 45.0%
CGAATTTGCATTGAGGGGTT+GGG + chr8.1:74724977-74724996 MS.gene59519:CDS 45.0%
GAATTTGCATTGAGGGGTTG+GGG + chr8.1:74724978-74724997 MS.gene59519:CDS 45.0%
GACAGTATTATTTCCAGCCG+AGG - chr8.1:74725142-74725161 None:intergenic 45.0%
GAGGATTGGGTTATCTTCAG+CGG - chr8.1:74723430-74723449 None:intergenic 45.0%
GAGTATCCAATGCTTAAGGC+AGG + chr8.1:74724632-74724651 MS.gene59519:CDS 45.0%
GATTCCGAATGTGAGGTTGA+GGG + chr8.1:74724259-74724278 MS.gene59519:CDS 45.0%
GCAAGCAACTGAAATGCGTA+CGG - chr8.1:74725187-74725206 None:intergenic 45.0%
GCAAGGAAACGAACCAAATC+AGG - chr8.1:74724722-74724741 None:intergenic 45.0%
GCATCAAGCACTTCTGATCA+AGG + chr8.1:74725415-74725434 MS.gene59519:CDS 45.0%
GGATTGTGATTCCGAATGTG+AGG + chr8.1:74724252-74724271 MS.gene59519:CDS 45.0%
GGGGATCATTGATATCTGGA+AGG - chr8.1:74725948-74725967 None:intergenic 45.0%
GTAGTGATCTTGATACACGG+AGG + chr8.1:74724342-74724361 MS.gene59519:CDS 45.0%
GTGATTCCCGATGATAGCTA+GGG - chr8.1:74723538-74723557 None:intergenic 45.0%
TATCTGGAAGGAGGTCTTCT+TGG - chr8.1:74725936-74725955 None:intergenic 45.0%
TCCAGATATCAATGATCCCC+GGG + chr8.1:74725948-74725967 MS.gene59519:CDS 45.0%
TCGAATTTGCATTGAGGGGT+TGG + chr8.1:74724976-74724995 MS.gene59519:CDS 45.0%
TCTACAAAGAAGGCTGCAAC+CGG + chr8.1:74724527-74724546 MS.gene59519:CDS 45.0%
TCTGCAATATCTGGCATGTC+AGG - chr8.1:74725862-74725881 None:intergenic 45.0%
TGATTCCGAATGTGAGGTTG+AGG + chr8.1:74724258-74724277 MS.gene59519:CDS 45.0%
TGCATGTAGATTGGTGGGAT+GGG - chr8.1:74725235-74725254 None:intergenic 45.0%
TGCTCTTGTGGATGAGCTTA+GGG + chr8.1:74724001-74724020 MS.gene59519:CDS 45.0%
TGGAGACTCACAAATGAGTC+TGG - chr8.1:74725740-74725759 None:intergenic 45.0%
TTATTTCCAGCCGAGGGAAA+AGG - chr8.1:74725135-74725154 None:intergenic 45.0%
TTCTCGGCAAGAACAAGACA+GGG + chr8.1:74725825-74725844 MS.gene59519:CDS 45.0%
TTCTGCATCCTGGGGTAAAA+TGG + chr8.1:74725780-74725799 MS.gene59519:CDS 45.0%
TTGCTCTTGTGGATGAGCTT+AGG + chr8.1:74724000-74724019 MS.gene59519:CDS 45.0%
TTGTGAGTCTCCAGTACTTC+TGG + chr8.1:74725747-74725766 MS.gene59519:CDS 45.0%
TTTCTCGGCAAGAACAAGAC+AGG + chr8.1:74725824-74725843 MS.gene59519:CDS 45.0%
! AGAGCATGAGAGGTACGATT+AGG - chr8.1:74723479-74723498 None:intergenic 45.0%
! CCTTTTCGGAATCGAGGATT+GGG - chr8.1:74723443-74723462 None:intergenic 45.0%
! CTTGCTGTGTGGACTTTGTT+AGG + chr8.1:74724101-74724120 MS.gene59519:CDS 45.0%
! GAGCATGAGAGGTACGATTA+GGG - chr8.1:74723478-74723497 None:intergenic 45.0%
! GCGCTTCTTTTCCAAGAATC+AGG - chr8.1:74725280-74725299 None:intergenic 45.0%
! TCCTTTTCGGAATCGAGGAT+TGG - chr8.1:74723444-74723463 None:intergenic 45.0%
! TTTGGTTCGTTTCCTTGCTG+CGG + chr8.1:74724724-74724743 MS.gene59519:CDS 45.0%
!! CATAGTTTGTTTGCGGCTGA+TGG + chr8.1:74724206-74724225 MS.gene59519:CDS 45.0%
!!! GTTTTTGAAGTTGACGGCAG+CGG - chr8.1:74723388-74723407 None:intergenic 45.0%
!!! TGGTTGAAGGTGGGGTTTTT+TGG - chr8.1:74725031-74725050 None:intergenic 45.0%
AAACCCAGTGGCGAATTGGA+AGG + chr8.1:74724469-74724488 MS.gene59519:CDS 50.0%
AACAAGTTCCGGAAGAAGCG+AGG - chr8.1:74723580-74723599 None:intergenic 50.0%
AAGAAGCGAGGGCCATGATT+TGG - chr8.1:74723568-74723587 None:intergenic 50.0%
AAGGGGATTGCTACGCGTTA+TGG + chr8.1:74724386-74724405 MS.gene59519:CDS 50.0%
ACAAGTTCCGGAAGAAGCGA+GGG - chr8.1:74723579-74723598 None:intergenic 50.0%
ACTCCAGGCCTTCCTTCAAA+AGG + chr8.1:74725324-74725343 MS.gene59519:CDS 50.0%
AGAACAAGACAGGGTTGAGG+AGG + chr8.1:74725834-74725853 MS.gene59519:CDS 50.0%
AGAAGCGAGGGCCATGATTT+GGG - chr8.1:74723567-74723586 None:intergenic 50.0%
AGCGGTTTAAGAGTTTCCGG+TGG - chr8.1:74723825-74723844 None:intergenic 50.0%
AGGGAACTGTGCACAAAGCT+GGG - chr8.1:74725995-74726014 None:intergenic 50.0%
AGTGCACCTGCCTTAAGCAT+TGG - chr8.1:74724641-74724660 None:intergenic 50.0%
AGTGGCGAATTGGAAGGACA+AGG + chr8.1:74724475-74724494 MS.gene59519:CDS 50.0%
ATGCAAACCCAGTGGCGAAT+TGG + chr8.1:74724465-74724484 MS.gene59519:CDS 50.0%
ATGTAGATTGGTGGGATGGG+TGG - chr8.1:74725232-74725251 None:intergenic 50.0%
CAACATTTGACTCCGCAGCA+AGG - chr8.1:74724739-74724758 None:intergenic 50.0%
CCCAATCCTCGATTCCGAAA+AGG + chr8.1:74723440-74723459 MS.gene59519:CDS 50.0%
CGCCACTGGGTTTGCATTAA+AGG - chr8.1:74724462-74724481 None:intergenic 50.0%
CGTGATTCCCGATGATAGCT+AGG - chr8.1:74723539-74723558 None:intergenic 50.0%
CTGCATGTAGATTGGTGGGA+TGG - chr8.1:74725236-74725255 None:intergenic 50.0%
CTTTGGTCAGTCTATCCCCT+TGG - chr8.1:74725366-74725385 None:intergenic 50.0%
GCAAGAACAAGACAGGGTTG+AGG + chr8.1:74725831-74725850 MS.gene59519:CDS 50.0%
GCACCAAATGAGATCAGCCA+AGG + chr8.1:74725346-74725365 MS.gene59519:CDS 50.0%
GGTTATCTTCAGCGGACCAA+CGG - chr8.1:74723422-74723441 None:intergenic 50.0%
GGTTTAAGAGTTTCCGGTGG+TGG - chr8.1:74723822-74723841 None:intergenic 50.0%
GTGATCTTGATACACGGAGG+AGG + chr8.1:74724345-74724364 MS.gene59519:CDS 50.0%
TAATTGCCGTAACCGCAAGC+TGG - chr8.1:74724154-74724173 None:intergenic 50.0%
TAGTAAAGGACGAGGGTGGA+AGG + chr8.1:74724798-74724817 MS.gene59519:CDS 50.0%
TCCCCTTGGCTGATCTCATT+TGG - chr8.1:74725352-74725371 None:intergenic 50.0%
TCCCGGGGATCATTGATATC+TGG - chr8.1:74725952-74725971 None:intergenic 50.0%
TCCGAAGCCCTAGCTATCAT+CGG + chr8.1:74723528-74723547 MS.gene59519:CDS 50.0%
TCCTCCCTCAACCTCACATT+CGG - chr8.1:74724266-74724285 None:intergenic 50.0%
TGCATCCTGGGGTAAAATGG+TGG + chr8.1:74725783-74725802 MS.gene59519:CDS 50.0%
TGTCCTTCCAATTCGCCACT+GGG - chr8.1:74724475-74724494 None:intergenic 50.0%
TTAGAGAGCTCCAGAGAAGG+CGG + chr8.1:74725521-74725540 MS.gene59519:CDS 50.0%
TTGTCCTTCCAATTCGCCAC+TGG - chr8.1:74724476-74724495 None:intergenic 50.0%
! ACTGTCCACCATTTTACCCC+AGG - chr8.1:74725791-74725810 None:intergenic 50.0%
! AGCTTTGTGCACAGTTCCCT+GGG + chr8.1:74725995-74726014 MS.gene59519:CDS 50.0%
! TGCTGATGGTCTTGCTCTTG+TGG + chr8.1:74723989-74724008 MS.gene59519:CDS 50.0%
! TTAAGAGTTTCCGGTGGTGG+TGG - chr8.1:74723819-74723838 None:intergenic 50.0%
! TTGACGGATCTGATCGGAGA+TGG - chr8.1:74723364-74723383 None:intergenic 50.0%
!! GAGAGTGTGGAGGAAGCATT+CGG - chr8.1:74723238-74723257 None:intergenic 50.0%
!! GGAAGCATTCGGAGAGGAAT+TGG - chr8.1:74723227-74723246 None:intergenic 50.0%
!! GTGCGATTTTGACCCAGTTC+TGG + chr8.1:74725653-74725672 MS.gene59519:CDS 50.0%
AAAACCACCTCCGTCTCCGT+TGG + chr8.1:74723403-74723422 MS.gene59519:CDS 55.0%
ACGGATCTGATCGGAGATGG+AGG - chr8.1:74723361-74723380 None:intergenic 55.0%
AGAAGCCCGCTTCACAAGAC+CGG - chr8.1:74725074-74725093 None:intergenic 55.0%
AGCAGCGCTGTCTGATTCAC+AGG - chr8.1:74726054-74726073 None:intergenic 55.0%
ATCATGGCCCTCGCTTCTTC+CGG + chr8.1:74723569-74723588 MS.gene59519:CDS 55.0%
ATCCTGCAGCTTCTGCATCC+TGG + chr8.1:74725770-74725789 MS.gene59519:CDS 55.0%
ATGACTTGAGGGAACCTCCC+AGG - chr8.1:74726015-74726034 None:intergenic 55.0%
CAGGGAACTGTGCACAAAGC+TGG - chr8.1:74725996-74726015 None:intergenic 55.0%
CCCGATGATAGCTAGGGCTT+CGG - chr8.1:74723532-74723551 None:intergenic 55.0%
CCGAAGCCCTAGCTATCATC+GGG + chr8.1:74723529-74723548 MS.gene59519:CDS 55.0%
CGGATCTGATCGGAGATGGA+GGG - chr8.1:74723360-74723379 None:intergenic 55.0%
GAAGCGAGGGCCATGATTTG+GGG - chr8.1:74723566-74723585 None:intergenic 55.0%
GAGGGTGGAAGGCTACGTTA+TGG + chr8.1:74724809-74724828 MS.gene59519:CDS 55.0%
GAGGTTGAGGGAGGATGATG+AGG + chr8.1:74724271-74724290 MS.gene59519:CDS 55.0%
GCTTTACTGACCGCCTTCTC+TGG - chr8.1:74725534-74725553 None:intergenic 55.0%
TCAGCACTCCCCTCAAGAGA+AGG - chr8.1:74723975-74723994 None:intergenic 55.0%
TCCGAATGTGAGGTTGAGGG+AGG + chr8.1:74724262-74724281 MS.gene59519:CDS 55.0%
TCCTGCAGCTTCTGCATCCT+GGG + chr8.1:74725771-74725790 MS.gene59519:CDS 55.0%
TCGTGACCAGCTTGCGGTTA+CGG + chr8.1:74724145-74724164 MS.gene59519:CDS 55.0%
TGACTTGAGGGAACCTCCCA+GGG - chr8.1:74726014-74726033 None:intergenic 55.0%
TGTGGATGAGCTTAGGGCTG+CGG + chr8.1:74724007-74724026 MS.gene59519:CDS 55.0%
TTTGTGCACAGTTCCCTGGG+AGG + chr8.1:74725998-74726017 MS.gene59519:CDS 55.0%
! AACAAGCCTTTTCCCTCGGC+TGG + chr8.1:74725126-74725145 MS.gene59519:CDS 55.0%
! AGCGGCTTGACGGATCTGAT+CGG - chr8.1:74723370-74723389 None:intergenic 55.0%
! AGTAGCCGGTCTTGTGAAGC+GGG + chr8.1:74725066-74725085 MS.gene59519:CDS 55.0%
! CAGCTTTGTGCACAGTTCCC+TGG + chr8.1:74725994-74726013 MS.gene59519:CDS 55.0%
! CAGTAGCCGGTCTTGTGAAG+CGG + chr8.1:74725065-74725084 MS.gene59519:CDS 55.0%
! GACTAGTCGTGACCAGCTTG+CGG + chr8.1:74724139-74724158 MS.gene59519:CDS 55.0%
! GCTGCAGGATCCAGAAGTAC+TGG - chr8.1:74725760-74725779 None:intergenic 55.0%
! TGTGAAGCGGGCTTCTGAGA+GGG + chr8.1:74725078-74725097 MS.gene59519:CDS 55.0%
! TTGTGAAGCGGGCTTCTGAG+AGG + chr8.1:74725077-74725096 MS.gene59519:CDS 55.0%
!! GAAGTTAGGTTGGGAGGAGG+CGG - chr8.1:74723307-74723326 None:intergenic 55.0%
!! GTGCCTTTTGAAGGAAGGCC+TGG - chr8.1:74725330-74725349 None:intergenic 55.0%
!! TCTCTTGAGGGGAGTGCTGA+TGG + chr8.1:74723975-74723994 MS.gene59519:CDS 55.0%
!! TGTGGAGGAAGCATTCGGAG+AGG - chr8.1:74723233-74723252 None:intergenic 55.0%
AGAGAGAGGATTCGGCGTGG+CGG - chr8.1:74723281-74723300 None:intergenic 60.0%
AGGAGAGAGAGGATTCGGCG+TGG - chr8.1:74723284-74723303 None:intergenic 60.0%
AGGCCTGGAGTAGACGCACA+AGG - chr8.1:74725315-74725334 None:intergenic 60.0%
AGTTGACGGCAGCGGCTTGA+CGG - chr8.1:74723380-74723399 None:intergenic 60.0%
CAGGGAGAGGAGAGAGAGTG+TGG - chr8.1:74723251-74723270 None:intergenic 60.0%
CCTGCAGCTTCTGCATCCTG+GGG + chr8.1:74725772-74725791 MS.gene59519:CDS 60.0%
CGCAGCGTCAATCAACGACG+CGG - chr8.1:74723781-74723800 None:intergenic 60.0%
CTTCAGCGGACCAACGGAGA+CGG - chr8.1:74723416-74723435 None:intergenic 60.0%
GGCCTGGAGTAGACGCACAA+GGG - chr8.1:74725314-74725333 None:intergenic 60.0%
GGCGAGGGCGAAGTTAGGTT+GGG - chr8.1:74723316-74723335 None:intergenic 60.0%
GGCGGAGGAGAGAGAGGATT+CGG - chr8.1:74723289-74723308 None:intergenic 60.0%
GGGCTTCGGAGAGCTGAGAT+TGG - chr8.1:74723518-74723537 None:intergenic 60.0%
TGCCCTTGTGCGTCTACTCC+AGG + chr8.1:74725309-74725328 MS.gene59519:CDS 60.0%
TGGAGGGTTCAGCGACGAGA+CGG - chr8.1:74723344-74723363 None:intergenic 60.0%
TGGAGTAGACGCACAAGGGC+AGG - chr8.1:74725310-74725329 None:intergenic 60.0%
TTCAGCGACGAGACGGAGGA+CGG - chr8.1:74723337-74723356 None:intergenic 60.0%
! CGCGTCGTTGATTGACGCTG+CGG + chr8.1:74723779-74723798 MS.gene59519:CDS 60.0%
! GGAGAGGAGAGAGAGTGTGG+AGG - chr8.1:74723248-74723267 None:intergenic 60.0%
!! AGAGTTTCCGGTGGTGGTGG+CGG - chr8.1:74723816-74723835 None:intergenic 60.0%
!! GAGGGCGAAGTTAGGTTGGG+AGG - chr8.1:74723313-74723332 None:intergenic 60.0%
!! GGCGAAGTTAGGTTGGGAGG+AGG - chr8.1:74723310-74723329 None:intergenic 60.0%
!! TTGGTGGCGGAGAGCATGAG+AGG - chr8.1:74723489-74723508 None:intergenic 60.0%
AGGACGGCGAGGGCGAAGTT+AGG - chr8.1:74723321-74723340 None:intergenic 65.0%
AGGGTTCAGCGACGAGACGG+AGG - chr8.1:74723341-74723360 None:intergenic 65.0%
CCCCAGGATGCAGAAGCTGC+AGG - chr8.1:74725775-74725794 None:intergenic 65.0%
CGGCGAGGGCGAAGTTAGGT+TGG - chr8.1:74723317-74723336 None:intergenic 65.0%
!! GTTAGGTTGGGAGGAGGCGG+AGG - chr8.1:74723304-74723323 None:intergenic 65.0%
ACAGCAGCCGCCACCACCAC+CGG + chr8.1:74723806-74723825 MS.gene59519:CDS 70.0%
AGAGGATTCGGCGTGGCGGC+GGG - chr8.1:74723277-74723296 None:intergenic 70.0%
CAGCGGACCAACGGAGACGG+AGG - chr8.1:74723413-74723432 None:intergenic 70.0%
CGGACCAACGGAGACGGAGG+TGG - chr8.1:74723410-74723429 None:intergenic 70.0%
GACGAGACGGAGGACGGCGA+GGG - chr8.1:74723331-74723350 None:intergenic 70.0%
GAGAGGATTCGGCGTGGCGG+CGG - chr8.1:74723278-74723297 None:intergenic 70.0%
GGAGGAGGCGGAGGAGAGAG+AGG - chr8.1:74723295-74723314 None:intergenic 70.0%
CGACGAGACGGAGGACGGCG+AGG - chr8.1:74723332-74723351 None:intergenic 75.0%
GAGGATTCGGCGTGGCGGCG+GGG - chr8.1:74723276-74723295 None:intergenic 75.0%
TGGCGGCGGGGTTCAGGGAG+AGG - chr8.1:74723264-74723283 None:intergenic 75.0%
! CGGCGTGGCGGCGGGGTTCA+GGG - chr8.1:74723269-74723288 None:intergenic 80.0%
! TCGGCGTGGCGGCGGGGTTC+AGG - chr8.1:74723270-74723289 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 74723201 74726110 74723201 ID=MS.gene59519
chr8.1 mRNA 74723201 74726110 74723201 ID=MS.gene59519.t1;Parent=MS.gene59519
chr8.1 exon 74723201 74726110 74723201 ID=MS.gene59519.t1.exon1;Parent=MS.gene59519.t1
chr8.1 CDS 74723201 74726110 74723201 ID=cds.MS.gene59519.t1;Parent=MS.gene59519.t1
Gene Sequence

>MS.gene59519

ATGGAATGGAACCAACAAACTCTCCAATTCCTCTCCGAATGCTTCCTCCACACTCTCTCTCCTCTCCCTGAACCCCGCCGCCACGCCGAATCCTCTCTCTCCTCCGCCTCCTCCCAACCTAACTTCGCCCTCGCCGTCCTCCGTCTCGTCGCTGAACCCTCCATCTCCGATCAGATCCGTCAAGCCGCTGCCGTCAACTTCAAAAACCACCTCCGTCTCCGTTGGTCCGCTGAAGATAACCCAATCCTCGATTCCGAAAAGGAACAAATCAAAACCCTAATCGTACCTCTCATGCTCTCCGCCACCAACAAAATCCAATCTCAGCTCTCCGAAGCCCTAGCTATCATCGGGAATCACGATTTCCCCAAATCATGGCCCTCGCTTCTTCCGGAACTTGTTGCTAGTCTTCAAAAAGGTTCTCAGAGTTCCGATTACGCTTCAATCAATGGTATTCTCAGTACCGCGAATTCGATTTTTAAGAAATTTCGTTTTCAGTATAAAACTAATGATTTATTGCTTGATTTGAAGTATTGTTTGGATAATTTTGCTGCTCCTTTGCTTGAGATTTTTCTCAAAACCGCGTCGTTGATTGACGCTGCGGCTGCACAGCAGCCGCCACCACCACCGGAAACTCTTAAACCGCTTTTCGAGTCACAGAAATTGTGTTGTAGGATATTTTTTTCACTGAATTTTCAAGAGTTGCCTGAGTTTTTTGAGGATCATATGAATGAATGGATGGGTGAGTTTAGGAAGTATTTGACTGCTAGTTATCCTTCTCTTGAGGGGAGTGCTGATGGTCTTGCTCTTGTGGATGAGCTTAGGGCTGCGGTTTGTGAGAATATTAATCTTTATATGGAGAAGAATGAGGAGGAGTTTAAGGTTTTTTTGAATGATTTTGCACTTGCTGTGTGGACTTTGTTAGGGAATGTGTCGCAGTCGACTAGTCGTGACCAGCTTGCGGTTACGGCAATTAAGTTTTTGACGACGGTTAGTACGAGTGTTCATCATAGTTTGTTTGCGGCTGATGGGATTATACCGCAGATTTGTCAGGGGATTGTGATTCCGAATGTGAGGTTGAGGGAGGATGATGAGGAGTTGTTTGAGATGAATCATATTGAGTATATTAGGAGGGATATGGAAGGTAGTGATCTTGATACACGGAGGAGGATTGCTTGTGAGTTGCTTAAGGGGATTGCTACGCGTTATGGAGATGCTGTTAGAAGCATTGTTTCTGCGCAAGTACAGAGTTTGTTAAGTTCCTTTAATGCAAACCCAGTGGCGAATTGGAAGGACAAGGATTGTGCGATATATTTGGTGGTCTCTCTTTCTACAAAGAAGGCTGCAACCGGTTATGTCTCCACAGATCTTGTTGATGTTCAAAGCTTTTTTGAATCTGTGATTGTCCCTGAGTTGCAAAAAGCAGATGTGAATGAGTATCCAATGCTTAAGGCAGGTGCACTCAAGTTCTTTACTATGTTCCGATCTCAAATATCAAAAGAAGTAGCATTGAGGTTTTTACCTGATTTGGTTCGTTTCCTTGCTGCGGAGTCAAATGTTGTTCATTCTTATGCTGCTAGCTGTATTGAGAAACTCTTAATAGTAAAGGACGAGGGTGGAAGGCTACGTTATGGTTCAGCAGATATCGCTCCAGTTTTCTCAATGCTGATGAACAATCTTTTCAGTGCCTTTAAGCTACCAGAGTCTGAAGAGAATCAGTATGTAATGAAATGTATTATGAGGGTTCTTGGTGTTGCAGATATACAACTTGATGTTGCTCGAATTTGCATTGAGGGGTTGGGGTCAATTCTTTCTGAAGTTTGCAGAAATCCAAAAAACCCCACCTTCAACCATTATCTGTTTGAGTCAGTAGCCGGTCTTGTGAAGCGGGCTTCTGAGAGGGACCCAACTCTTGTGTCTGTTTTTGAAACAAGCCTTTTCCCTCGGCTGGAAATAATACTGTCCAATGATGTAACTGAATTTTTCCCGTACGCATTTCAGTTGCTTGCTCTGCTTGTTGAGTTAAACAGACCACCCATCCCACCAATCTACATGCAGATATTTGAGATTCTTTTGTCACCTGATTCTTGGAAAAGAAGCGCAAGCGTTCCTGCCCTTGTGCGTCTACTCCAGGCCTTCCTTCAAAAGGCACCAAATGAGATCAGCCAAGGGGATAGACTGACCAAAGTACTTGGCATATTTGACACGCTAATACAAGCATCAAGCACTTCTGATCAAGGATTTTACGTGCTTAACACAGTCATTGAAAGTCTTCAGTATGATGTTCTCACGCCTTATGTTTCTCACATTTGGGCTGCTATTTTTAGAGAGCTCCAGAGAAGGCGGTCAGTAAAGCTCCTCAAGTCTCTCTTGATATTCAGTTCACTGTTTCTGGTTAAGCATGGTTCTGCAAATCTAGTTAATACTATGAATGCCGTCCAGCCTGATATATTTAGTGCGATTTTGACCCAGTTCTGGATTCCGAATCTTAAGCTGATTACTGGAACTATAGAGCTCAAACTGACTGCAGTTGCTTCAACCAGACTCATTTGTGAGTCTCCAGTACTTCTGGATCCTGCAGCTTCTGCATCCTGGGGTAAAATGGTGGACAGTATTGTGACACTTCTTTCTCGGCAAGAACAAGACAGGGTTGAGGAGGAGCCTGACATGCCAGATATTGCAGAAAATGTAGGTTATACTGCCACCTTCGTCCAACTTTACAATGCTGGAAGGAACCAAGAAGACCTCCTTCCAGATATCAATGATCCCCGGGAATTTTTTGTTTCTTCATTGGCCCAGCTTTGTGCACAGTTCCCTGGGAGGTTCCCTCAAGTCATCACTGCAAATGTTGATCCTGTGAATCAGACAGCGCTGCTTCAACTTTGCACCACTTACAACCGAGCATTAGTTTGA

Protein sequence

>MS.gene59519.t1

MEWNQQTLQFLSECFLHTLSPLPEPRRHAESSLSSASSQPNFALAVLRLVAEPSISDQIRQAAAVNFKNHLRLRWSAEDNPILDSEKEQIKTLIVPLMLSATNKIQSQLSEALAIIGNHDFPKSWPSLLPELVASLQKGSQSSDYASINGILSTANSIFKKFRFQYKTNDLLLDLKYCLDNFAAPLLEIFLKTASLIDAAAAQQPPPPPETLKPLFESQKLCCRIFFSLNFQELPEFFEDHMNEWMGEFRKYLTASYPSLEGSADGLALVDELRAAVCENINLYMEKNEEEFKVFLNDFALAVWTLLGNVSQSTSRDQLAVTAIKFLTTVSTSVHHSLFAADGIIPQICQGIVIPNVRLREDDEELFEMNHIEYIRRDMEGSDLDTRRRIACELLKGIATRYGDAVRSIVSAQVQSLLSSFNANPVANWKDKDCAIYLVVSLSTKKAATGYVSTDLVDVQSFFESVIVPELQKADVNEYPMLKAGALKFFTMFRSQISKEVALRFLPDLVRFLAAESNVVHSYAASCIEKLLIVKDEGGRLRYGSADIAPVFSMLMNNLFSAFKLPESEENQYVMKCIMRVLGVADIQLDVARICIEGLGSILSEVCRNPKNPTFNHYLFESVAGLVKRASERDPTLVSVFETSLFPRLEIILSNDVTEFFPYAFQLLALLVELNRPPIPPIYMQIFEILLSPDSWKRSASVPALVRLLQAFLQKAPNEISQGDRLTKVLGIFDTLIQASSTSDQGFYVLNTVIESLQYDVLTPYVSHIWAAIFRELQRRRSVKLLKSLLIFSSLFLVKHGSANLVNTMNAVQPDIFSAILTQFWIPNLKLITGTIELKLTAVASTRLICESPVLLDPAASASWGKMVDSIVTLLSRQEQDRVEEEPDMPDIAENVGYTATFVQLYNAGRNQEDLLPDINDPREFFVSSLAQLCAQFPGRFPQVITANVDPVNQTALLQLCTTYNRALV