Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59593.t1 | XP_013444689.1 | 93.6 | 865 | 54 | 1 | 1 | 865 | 1 | 864 | 0.00E+00 | 1547.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59593.t1 | Q9DBD5 | 22.6 | 585 | 373 | 18 | 93 | 647 | 105 | 639 | 1.1e-12 | 77.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59593.t1 | A0A072TMI2 | 93.6 | 865 | 54 | 1 | 1 | 865 | 1 | 864 | 0.0e+00 | 1547.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052076 | MS.gene59593 | 0.814726 | 1.33E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59593.t1 | MTR_8g028030 | 95.954 | 865 | 34 | 1 | 1 | 865 | 1 | 864 | 0.0 | 1622 |
| MS.gene59593.t1 | MTR_3g075460 | 84.579 | 843 | 130 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1382 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59593.t1 | AT1G30240 | 43.243 | 777 | 388 | 11 | 1 | 753 | 1 | 748 | 0.0 | 587 |
| MS.gene59593.t1 | AT1G30240 | 43.115 | 777 | 387 | 12 | 1 | 753 | 1 | 746 | 0.0 | 579 |
Find 207 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCCATCTTTCTTGAATTT+TGG | 0.085004 | 8.2:+69296415 | None:intergenic |
| CCTTATTCAGAATCAGAATT+AGG | 0.157731 | 8.2:+69288850 | None:intergenic |
| TAATCTGTTTGCTGACTATT+TGG | 0.172025 | 8.2:-69289358 | MS.gene59593:CDS |
| CCTAATTCTGATTCTGAATA+AGG | 0.187547 | 8.2:-69288850 | None:intergenic |
| TAATGACGCTGAATAGAAAA+TGG | 0.199449 | 8.2:+69295596 | None:intergenic |
| TGCTGCATTGCGTGCTCTTT+TGG | 0.220657 | 8.2:-69290915 | MS.gene59593:CDS |
| GGAGTCACGGGGCATTTATT+TGG | 0.227493 | 8.2:+69292161 | None:intergenic |
| AATAAACGTGTTTCAGAAAA+AGG | 0.252333 | 8.2:-69290969 | MS.gene59593:CDS |
| GTTGAATTCAAGCTAGATTA+TGG | 0.263024 | 8.2:-69288928 | MS.gene59593:CDS |
| TTCCAAGCTTTAACTTGTTT+AGG | 0.265927 | 8.2:+69298947 | None:intergenic |
| TCAAGGCCCTGTGATAAATA+TGG | 0.273291 | 8.2:+69290866 | None:intergenic |
| TCCAAGCTTTAACTTGTTTA+GGG | 0.286079 | 8.2:+69298948 | None:intergenic |
| TGTACCTGTTCGCCTATTAT+TGG | 0.307235 | 8.2:-69293995 | MS.gene59593:CDS |
| GTAGAGAAGTCAGCAACTTC+TGG | 0.312846 | 8.2:+69297949 | None:intergenic |
| GCAGCTACCCTCAGAGAAAT+TGG | 0.315997 | 8.2:+69292140 | None:intergenic |
| CGTGTGCGCTGCCAGATTTA+AGG | 0.316133 | 8.2:-69293342 | MS.gene59593:CDS |
| CTTATTCAGAATCAGAATTA+GGG | 0.317470 | 8.2:+69288851 | None:intergenic |
| TACCAGCAAGTAATAGAAAA+AGG | 0.317838 | 8.2:-69292250 | MS.gene59593:CDS |
| AATGGATTGTTGATTCTTCC+TGG | 0.319700 | 8.2:-69294278 | MS.gene59593:CDS |
| ATTATATGTTCGTGATTGTT+TGG | 0.320839 | 8.2:+69294184 | None:intergenic |
| GAGAGAATTCTGACGGTAAA+TGG | 0.327701 | 8.2:-69293964 | MS.gene59593:CDS |
| AAATTAAACAGTACCTTAAC+TGG | 0.330077 | 8.2:+69294113 | None:intergenic |
| TATGACGCTGGTGGTGGTTT+GGG | 0.338029 | 8.2:-69292194 | MS.gene59593:CDS |
| ATGATGAGATGGGTGGGTTA+TGG | 0.338722 | 8.2:-69289326 | MS.gene59593:CDS |
| ATTCCCGCCCAGCGTTTATC+AGG | 0.339308 | 8.2:+69298041 | None:intergenic |
| TCTCAACAAGGACCAATAAT+AGG | 0.350210 | 8.2:+69293983 | None:intergenic |
| ATGACAATTCAGAGGCAGTA+TGG | 0.357234 | 8.2:-69296345 | MS.gene59593:CDS |
| TGAGGATGTCACAGAATCTA+TGG | 0.357358 | 8.2:-69298972 | MS.gene59593:CDS |
| AGCTGCCCTTGAGGCATTAG+AGG | 0.361062 | 8.2:-69292123 | MS.gene59593:CDS |
| CAATTAAATTTGACATTTGA+AGG | 0.363396 | 8.2:-69294414 | MS.gene59593:CDS |
| ATTGCTTACAGCTATTATAA+AGG | 0.363453 | 8.2:-69293848 | MS.gene59593:CDS |
| CCTTGCAAGTAGATCAGATA+TGG | 0.367120 | 8.2:+69297146 | None:intergenic |
| TAGACTTTAATCCTTAAATC+TGG | 0.370511 | 8.2:+69293331 | None:intergenic |
| AACTAAAGTGTCTTCTGAAA+TGG | 0.380037 | 8.2:-69289286 | MS.gene59593:CDS |
| TTTCCAAAATTCAAGAAAGA+TGG | 0.380906 | 8.2:-69296418 | MS.gene59593:CDS |
| TCACCGAAAGTATCGTTGTT+TGG | 0.390639 | 8.2:+69289471 | None:intergenic |
| CAACAACCAGACATAAGTAT+AGG | 0.393758 | 8.2:+69294158 | None:intergenic |
| GGTGAAGCTCAGTTCAGTTT+CGG | 0.394031 | 8.2:-69289453 | MS.gene59593:CDS |
| GTACCATCTCACTCCTCTCT+TGG | 0.396090 | 8.2:+69289235 | None:intergenic |
| AGGCTACACATATGCAAAAC+TGG | 0.403347 | 8.2:+69293874 | None:intergenic |
| ACCACACGGTGTAAGATTCT+TGG | 0.406027 | 8.2:+69297973 | None:intergenic |
| TCTTGGATGTTGGCGCTAGA+AGG | 0.407285 | 8.2:+69289252 | None:intergenic |
| ATATGACGCTGGTGGTGGTT+TGG | 0.411237 | 8.2:-69292195 | MS.gene59593:CDS |
| CAAGGCCCTGTGATAAATAT+GGG | 0.415024 | 8.2:+69290867 | None:intergenic |
| AAACAACCTCCACCACCTTT+AGG | 0.415294 | 8.2:-69294254 | MS.gene59593:CDS |
| TGAAGCTGATTCCGCATGAT+TGG | 0.421783 | 8.2:+69288999 | None:intergenic |
| CAGTACAAATGGTTCCGTTC+AGG | 0.422323 | 8.2:-69292219 | MS.gene59593:CDS |
| AGAGACAACGTTGGAGAGTT+GGG | 0.422441 | 8.2:+69299021 | None:intergenic |
| TTCATTCTAAAGGAGTTCAA+TGG | 0.422755 | 8.2:-69294296 | MS.gene59593:CDS |
| CTAATTCTGATTCTGAATAA+GGG | 0.424302 | 8.2:-69288849 | None:intergenic |
| TAATAGCTGTAAGCAATTCC+AGG | 0.424831 | 8.2:+69293854 | None:intergenic |
| AGTTGGGAAGGATTGGAAAA+GGG | 0.426539 | 8.2:+69299037 | None:intergenic |
| AAAACAGGAAAGCAACAAAC+TGG | 0.426716 | 8.2:-69289585 | MS.gene59593:intron |
| AACAACCAGACATAAGTATA+GGG | 0.430380 | 8.2:+69294159 | None:intergenic |
| ACAAACTGAATGGAGTAGTA+TGG | 0.430823 | 8.2:+69289409 | None:intergenic |
| TTTCATTACAAAGTACTTCA+AGG | 0.431833 | 8.2:-69293365 | MS.gene59593:CDS |
| GCAATGGATTCTTTCAAAGA+AGG | 0.433775 | 8.2:-69291007 | MS.gene59593:CDS |
| CACAAATACATATCCAGTTA+AGG | 0.438702 | 8.2:-69294126 | MS.gene59593:intron |
| GTTGGAGAGTTGGGAAGGAT+TGG | 0.440231 | 8.2:+69299030 | None:intergenic |
| TATTGACAACTTCCTTTGAC+AGG | 0.442647 | 8.2:+69292360 | None:intergenic |
| GGAAATCATCTGTTGCTTCG+TGG | 0.442825 | 8.2:-69298928 | MS.gene59593:CDS |
| GAAATCATCTGTTGCTTCGT+GGG | 0.444237 | 8.2:-69298927 | MS.gene59593:CDS |
| TGAATGGAGTAGTATGGTTC+CGG | 0.444382 | 8.2:+69289415 | None:intergenic |
| TGGGCGGGAATATCCTTGCT+AGG | 0.448876 | 8.2:-69298029 | MS.gene59593:CDS |
| TGCTGGTAGTGGCGCTATAG+TGG | 0.449506 | 8.2:+69292265 | None:intergenic |
| CTCACTCCTCTCTTGGATGT+TGG | 0.452377 | 8.2:+69289242 | None:intergenic |
| CATATGCAAAACTGGAAGTT+CGG | 0.453353 | 8.2:+69293882 | None:intergenic |
| CTCACTAAATGAGAATCTTC+CGG | 0.454151 | 8.2:+69297186 | None:intergenic |
| TTTCTATTACTTGCTGGTAG+TGG | 0.454666 | 8.2:+69292254 | None:intergenic |
| GGATGTTGGCGCTAGAAGGC+AGG | 0.458437 | 8.2:+69289256 | None:intergenic |
| TTAATAGCAACACAACAAAA+AGG | 0.459723 | 8.2:-69294208 | MS.gene59593:CDS |
| TTTGATACATTGCCTCCTAA+AGG | 0.462379 | 8.2:+69294239 | None:intergenic |
| ACAGCTATTATAAAGGCAAC+AGG | 0.463034 | 8.2:-69293841 | MS.gene59593:CDS |
| GTGCTTGTCGTGCAATTGAC+AGG | 0.466301 | 8.2:+69289111 | None:intergenic |
| TGGAAGTGCTTATACATCCT+AGG | 0.468728 | 8.2:-69289521 | MS.gene59593:CDS |
| ACATTTGAAGGTGTAGAAGA+AGG | 0.471942 | 8.2:-69294402 | MS.gene59593:intron |
| TCGTGTAACATCTTCAGAAC+AGG | 0.472772 | 8.2:+69296367 | None:intergenic |
| TATCAAAAGACTATCAACTT+TGG | 0.473873 | 8.2:+69291036 | None:intergenic |
| TGCTGTCTGGCGGTCATGAA+TGG | 0.474012 | 8.2:+69293919 | None:intergenic |
| CCTCCAAACAACGATACTTT+CGG | 0.474398 | 8.2:-69289474 | MS.gene59593:CDS |
| GGGTCTCCATCCACAATGTC+AGG | 0.476248 | 8.2:+69288871 | None:intergenic |
| TACCTCTTCGGAAAAGTTCA+AGG | 0.479636 | 8.2:+69290849 | None:intergenic |
| CTCAGAGAAATTGGAGTCAC+GGG | 0.484768 | 8.2:+69292149 | None:intergenic |
| GTTGGGAAGGATTGGAAAAG+GGG | 0.486102 | 8.2:+69299038 | None:intergenic |
| AAGAGACAACGTTGGAGAGT+TGG | 0.487122 | 8.2:+69299020 | None:intergenic |
| CAGGAATATGACGCTGGTGG+TGG | 0.488429 | 8.2:-69292200 | MS.gene59593:CDS |
| TTCCAAAATTCAAGAAAGAT+GGG | 0.488590 | 8.2:-69296417 | MS.gene59593:CDS |
| CATTGCAGAATTCATTCTAA+AGG | 0.491560 | 8.2:-69294306 | MS.gene59593:intron |
| GAGTTGGGAAGGATTGGAAA+AGG | 0.491718 | 8.2:+69299036 | None:intergenic |
| AAAGACTCTGCTCATATCCA+TGG | 0.492007 | 8.2:-69293299 | MS.gene59593:CDS |
| ATTGCTGCTAAACTTGTGTC+TGG | 0.492482 | 8.2:-69294726 | MS.gene59593:CDS |
| AGGACCAATAATAGGCGAAC+AGG | 0.493264 | 8.2:+69293991 | None:intergenic |
| ACATCCTAGGGCACTTCCGC+TGG | 0.493933 | 8.2:-69289508 | MS.gene59593:CDS |
| ACCCTAAACAAGTTAAAGCT+TGG | 0.494366 | 8.2:-69298949 | MS.gene59593:CDS |
| ATGGATTGTTGATTCTTCCT+GGG | 0.496401 | 8.2:-69294277 | MS.gene59593:CDS |
| AGGAAGCACAGCAGTACAAA+TGG | 0.497134 | 8.2:-69292230 | MS.gene59593:CDS |
| GGTGGTGGAGGTTGTTTCCC+AGG | 0.500133 | 8.2:+69294260 | None:intergenic |
| GAAGTTGCTGACTTCTCTAC+AGG | 0.505085 | 8.2:-69297946 | MS.gene59593:intron |
| AATGTCCCTATACTTATGTC+TGG | 0.506036 | 8.2:-69294164 | MS.gene59593:CDS |
| CCATCCACAATGTCAGGAAA+AGG | 0.507104 | 8.2:+69288877 | None:intergenic |
| TTCCCAGCCTGATAAACGCT+GGG | 0.507923 | 8.2:-69298048 | MS.gene59593:intron |
| TCTGTTTGAGACAAACTGAA+TGG | 0.508268 | 8.2:+69289399 | None:intergenic |
| TCTGCACGTGTCGCTATCTC+AGG | 0.509924 | 8.2:+69289213 | None:intergenic |
| TGTAATGAAACGTACAATAG+AGG | 0.510010 | 8.2:+69293378 | None:intergenic |
| GCCTCCATTCTTCTTCTCTA+CGG | 0.510083 | 8.2:+69292316 | None:intergenic |
| TTTCCCAGCCTGATAAACGC+TGG | 0.512466 | 8.2:-69298049 | MS.gene59593:intron |
| CAGCCTGATAAACGCTGGGC+GGG | 0.520512 | 8.2:-69298044 | MS.gene59593:CDS |
| TTTGCTGACTATTTGGCAAA+CGG | 0.521638 | 8.2:-69289351 | MS.gene59593:CDS |
| GAAAAGGGGTGGTCCACTGT+AGG | 0.521911 | 8.2:+69299052 | None:intergenic |
| GCTTCTTCTTTCTAGTCATG+AGG | 0.522195 | 8.2:-69298891 | MS.gene59593:intron |
| TTGATATAGAAGTACCTCTT+CGG | 0.524446 | 8.2:+69290837 | None:intergenic |
| AATGACGCTGAATAGAAAAT+GGG | 0.526071 | 8.2:+69295597 | None:intergenic |
| CGAAAGTATCGTTGTTTGGA+GGG | 0.528144 | 8.2:+69289475 | None:intergenic |
| GATGTTGGCGCTAGAAGGCA+GGG | 0.528175 | 8.2:+69289257 | None:intergenic |
| TTTGTCTCAAACAGAACCTC+CGG | 0.530219 | 8.2:-69289391 | MS.gene59593:CDS |
| GGGCGGGAATATCCTTGCTA+GGG | 0.530819 | 8.2:-69298028 | MS.gene59593:CDS |
| GCATTACTTCCAAAATCAAA+AGG | 0.531439 | 8.2:-69294492 | MS.gene59593:CDS |
| AACAGATTATTAACAGAGAC+CGG | 0.533036 | 8.2:+69289372 | None:intergenic |
| AAGAATGGAGGCATGTTGAA+TGG | 0.533706 | 8.2:-69292305 | MS.gene59593:CDS |
| AGTACCGTAGAGAAGAAGAA+TGG | 0.536959 | 8.2:-69292320 | MS.gene59593:CDS |
| AAGGAGTCAAAGGTTGCCAT+TGG | 0.537533 | 8.2:+69299139 | None:intergenic |
| CCGGCCGGCGGTGATATTCA+CGG | 0.538758 | 8.2:-69289087 | MS.gene59593:CDS |
| TGCTCATGCTATGTTAACCT+TGG | 0.539949 | 8.2:-69289541 | MS.gene59593:CDS |
| CATATACATATTAGGTTAAG+CGG | 0.542387 | 8.2:-69296442 | MS.gene59593:intron |
| CAAAAGGAGATGAAGAAAGC+TGG | 0.543462 | 8.2:-69294476 | MS.gene59593:CDS |
| CTGCTCATATCCATGGGTGT+TGG | 0.546593 | 8.2:-69293292 | MS.gene59593:intron |
| AAATGGGAATGAAATTATCA+AGG | 0.548173 | 8.2:+69295613 | None:intergenic |
| ATGAATGGCAATGACATTGC+TGG | 0.549222 | 8.2:+69293934 | None:intergenic |
| CTTTCTGAAACAATCCTCTC+CGG | 0.553128 | 8.2:+69289042 | None:intergenic |
| CCGAAAGTATCGTTGTTTGG+AGG | 0.555012 | 8.2:+69289474 | None:intergenic |
| GGCAAACGGTGATGATGAGA+TGG | 0.558609 | 8.2:-69289337 | MS.gene59593:CDS |
| TCAACCAGCGGAAGTGCCCT+AGG | 0.558667 | 8.2:+69289504 | None:intergenic |
| AAAAGGGGTGGTCCACTGTA+GGG | 0.565359 | 8.2:+69299053 | None:intergenic |
| TTGCCTCCTAAAGGTGGTGG+AGG | 0.567399 | 8.2:+69294248 | None:intergenic |
| ACATTGCCTCCTAAAGGTGG+TGG | 0.567874 | 8.2:+69294245 | None:intergenic |
| CATAGCATGAGCACAGAACT+CGG | 0.570086 | 8.2:+69289551 | None:intergenic |
| TGACAATTCAGAGGCAGTAT+GGG | 0.571897 | 8.2:-69296344 | MS.gene59593:intron |
| TGCACGACAAGCACTCCGGC+CGG | 0.572082 | 8.2:-69289102 | MS.gene59593:CDS |
| CATGTCTCTGAAGGAGTCAA+AGG | 0.574946 | 8.2:+69299129 | None:intergenic |
| CCTCAGAGAAATTGGAGTCA+CGG | 0.577410 | 8.2:+69292148 | None:intergenic |
| CGTGACTCCAATTTCTCTGA+GGG | 0.577944 | 8.2:-69292147 | MS.gene59593:CDS |
| CGGAAGATTCTCATTTAGTG+AGG | 0.578427 | 8.2:-69297185 | MS.gene59593:CDS |
| TGCAGCTACTGATATAGAGC+CGG | 0.579105 | 8.2:-69289061 | MS.gene59593:CDS |
| CCGTCAGAATTCTCTCAACA+AGG | 0.582839 | 8.2:+69293971 | None:intergenic |
| CCATATCTGATCTACTTGCA+AGG | 0.583048 | 8.2:-69297146 | MS.gene59593:intron |
| AATTGCATGACAGATTCTCC+AGG | 0.583617 | 8.2:+69289141 | None:intergenic |
| CAACCTCCACCACCTTTAGG+AGG | 0.584606 | 8.2:-69294251 | MS.gene59593:CDS |
| ACATTCAAGTCAGATCATCC+TGG | 0.585118 | 8.2:-69289159 | MS.gene59593:CDS |
| TGCAGCAAGTTGCAAATCTG+TGG | 0.588004 | 8.2:+69290931 | None:intergenic |
| ATGCAGTCATGATATGATGA+AGG | 0.588527 | 8.2:-69294700 | MS.gene59593:intron |
| GGAAGTGCTTATACATCCTA+GGG | 0.588969 | 8.2:-69289520 | MS.gene59593:CDS |
| ACAACGTTGGAGAGTTGGGA+AGG | 0.589253 | 8.2:+69299025 | None:intergenic |
| CCGAGACACAGATAGAAAAG+AGG | 0.590894 | 8.2:+69290892 | None:intergenic |
| AAGAGCCTCTAATGCCTCAA+GGG | 0.592476 | 8.2:+69292118 | None:intergenic |
| TCCAAGAATCTTACACCGTG+TGG | 0.592901 | 8.2:-69297974 | MS.gene59593:CDS |
| TCTGAGGGTAGCTGCCCTTG+AGG | 0.593580 | 8.2:-69292132 | MS.gene59593:CDS |
| AATGGCTTTATGCCTGTCAA+AGG | 0.595292 | 8.2:-69292372 | MS.gene59593:CDS |
| CCGTGACTCCAATTTCTCTG+AGG | 0.596912 | 8.2:-69292148 | MS.gene59593:CDS |
| AGATTCTCATTTAGTGAGGG+TGG | 0.597191 | 8.2:-69297181 | MS.gene59593:CDS |
| CCGTGAATATCACCGCCGGC+CGG | 0.601207 | 8.2:+69289087 | None:intergenic |
| GATACATTGCCTCCTAAAGG+TGG | 0.602300 | 8.2:+69294242 | None:intergenic |
| AAGACTCTGCTCATATCCAT+GGG | 0.606862 | 8.2:-69293298 | MS.gene59593:CDS |
| AGGATGTATAAGCACTTCCA+AGG | 0.609483 | 8.2:+69289524 | None:intergenic |
| TCCGTTCAGGAATATGACGC+TGG | 0.614063 | 8.2:-69292206 | MS.gene59593:CDS |
| AACGGTGATGATGAGATGGG+TGG | 0.619984 | 8.2:-69289333 | MS.gene59593:CDS |
| CCTTGTTGAGAGAATTCTGA+CGG | 0.624971 | 8.2:-69293971 | MS.gene59593:CDS |
| AAGGCCCTGTGATAAATATG+GGG | 0.625186 | 8.2:+69290868 | None:intergenic |
| GGAAGATTCTCATTTAGTGA+GGG | 0.628305 | 8.2:-69297184 | MS.gene59593:CDS |
| AGGATGATCTGACTTGAATG+TGG | 0.629536 | 8.2:+69289161 | None:intergenic |
| GCTAGATTATGGCAATTCAG+TGG | 0.631745 | 8.2:-69288917 | MS.gene59593:CDS |
| AACACATTCTCTCTTATCTG+AGG | 0.633955 | 8.2:-69298990 | MS.gene59593:CDS |
| TCGGACATGAATATGCTAGC+CGG | 0.634183 | 8.2:-69289434 | MS.gene59593:CDS |
| TAAGAGCCTCTAATGCCTCA+AGG | 0.634846 | 8.2:+69292117 | None:intergenic |
| CTGAACAACTTTCACAGCAG+AGG | 0.636421 | 8.2:+69296390 | None:intergenic |
| ATCACCGTGAATATCACCGC+CGG | 0.637930 | 8.2:+69289083 | None:intergenic |
| GTACTTTAAAATCAGAACAG+TGG | 0.642286 | 8.2:-69291063 | MS.gene59593:CDS |
| AATGTCGTACATGTCTCTGA+AGG | 0.647593 | 8.2:+69299120 | None:intergenic |
| CAATTGCACGACAAGCACTC+CGG | 0.651734 | 8.2:-69289106 | MS.gene59593:CDS |
| ACGACAAGCACTCCGGCCGG+CGG | 0.651950 | 8.2:-69289099 | MS.gene59593:CDS |
| ACCGTAGAGAAGAAGAATGG+AGG | 0.653694 | 8.2:-69292317 | MS.gene59593:CDS |
| CATCCAAGAGAGGAGTGAGA+TGG | 0.657149 | 8.2:-69289238 | MS.gene59593:CDS |
| TTTGATCAAAGAGACAACGT+TGG | 0.658884 | 8.2:+69299012 | None:intergenic |
| TTCACAAGTAACCCCTAGCA+AGG | 0.661079 | 8.2:+69298016 | None:intergenic |
| CCAGCCTGATAAACGCTGGG+CGG | 0.661082 | 8.2:-69298045 | MS.gene59593:intron |
| ACCAGCGTCATATTCCTGAA+CGG | 0.665771 | 8.2:+69292205 | None:intergenic |
| ATGTTGGCGCTAGAAGGCAG+GGG | 0.667210 | 8.2:+69289258 | None:intergenic |
| ATGAGAGTGTTGAGGAGACG+TGG | 0.670043 | 8.2:+69299088 | None:intergenic |
| GGGAAGGATTGGAAAAGGGG+TGG | 0.673745 | 8.2:+69299041 | None:intergenic |
| GTTCAGGAATATGACGCTGG+TGG | 0.674633 | 8.2:-69292203 | MS.gene59593:CDS |
| CAGAGACAATCTCCCTACAG+TGG | 0.676582 | 8.2:-69299065 | MS.gene59593:CDS |
| ACGGTGATGATGAGATGGGT+GGG | 0.677438 | 8.2:-69289332 | MS.gene59593:CDS |
| CAGCAACTTCTGGAACCACA+CGG | 0.679707 | 8.2:+69297959 | None:intergenic |
| TCATAATGAAGCCAATCATG+CGG | 0.680678 | 8.2:-69289010 | MS.gene59593:CDS |
| CTAGCGCCAACATCCAAGAG+AGG | 0.681029 | 8.2:-69289248 | MS.gene59593:CDS |
| AGGCCCTGTGATAAATATGG+GGG | 0.684316 | 8.2:+69290869 | None:intergenic |
| CTACTGATATAGAGCCGGAG+AGG | 0.687191 | 8.2:-69289056 | MS.gene59593:CDS |
| TGTCTCTGATGAGAGTGTTG+AGG | 0.689333 | 8.2:+69299080 | None:intergenic |
| GCTGCTAAACTTGTGTCTGG+AGG | 0.692642 | 8.2:-69294723 | MS.gene59593:CDS |
| GCAAACGGTGATGATGAGAT+GGG | 0.695074 | 8.2:-69289336 | MS.gene59593:CDS |
| GTTACACGATGACAATTCAG+AGG | 0.700720 | 8.2:-69296353 | MS.gene59593:CDS |
| GGCGGGAATATCCTTGCTAG+GGG | 0.706076 | 8.2:-69298027 | MS.gene59593:CDS |
| CGTACAATAGAGGCAGCATG+TGG | 0.711250 | 8.2:+69293388 | None:intergenic |
| GGAGGGACATAATCAACCAG+CGG | 0.719450 | 8.2:+69289492 | None:intergenic |
| AGATTATTAACAGAGACCGG+AGG | 0.723177 | 8.2:+69289375 | None:intergenic |
| CTATTATAAAGGCAACAGGA+AGG | 0.726579 | 8.2:-69293837 | MS.gene59593:intron |
| TCAGAGAAATTGGAGTCACG+GGG | 0.735702 | 8.2:+69292150 | None:intergenic |
| ATTAGAGGCTCTTATCACTG+TGG | 0.745157 | 8.2:-69292108 | MS.gene59593:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 69288852 | 69299158 | 69288852 | ID=MS.gene59593 |
| chr8.2 | mRNA | 69288852 | 69299158 | 69288852 | ID=MS.gene59593.t1;Parent=MS.gene59593 |
| chr8.2 | exon | 69298892 | 69299158 | 69298892 | ID=MS.gene59593.t1.exon1;Parent=MS.gene59593.t1 |
| chr8.2 | CDS | 69298892 | 69299158 | 69298892 | ID=cds.MS.gene59593.t1;Parent=MS.gene59593.t1 |
| chr8.2 | exon | 69297947 | 69298063 | 69297947 | ID=MS.gene59593.t1.exon2;Parent=MS.gene59593.t1 |
| chr8.2 | CDS | 69297947 | 69298063 | 69297947 | ID=cds.MS.gene59593.t1;Parent=MS.gene59593.t1 |
| chr8.2 | exon | 69297147 | 69297211 | 69297147 | ID=MS.gene59593.t1.exon3;Parent=MS.gene59593.t1 |
| chr8.2 | CDS | 69297147 | 69297211 | 69297147 | ID=cds.MS.gene59593.t1;Parent=MS.gene59593.t1 |
| chr8.2 | exon | 69296345 | 69296450 | 69296345 | ID=MS.gene59593.t1.exon4;Parent=MS.gene59593.t1 |
| chr8.2 | CDS | 69296345 | 69296450 | 69296345 | ID=cds.MS.gene59593.t1;Parent=MS.gene59593.t1 |
| chr8.2 | exon | 69295589 | 69295660 | 69295589 | ID=MS.gene59593.t1.exon5;Parent=MS.gene59593.t1 |
| chr8.2 | CDS | 69295589 | 69295660 | 69295589 | ID=cds.MS.gene59593.t1;Parent=MS.gene59593.t1 |
| chr8.2 | exon | 69294701 | 69294760 | 69294701 | ID=MS.gene59593.t1.exon6;Parent=MS.gene59593.t1 |
| chr8.2 | CDS | 69294701 | 69294760 | 69294701 | ID=cds.MS.gene59593.t1;Parent=MS.gene59593.t1 |
| chr8.2 | exon | 69294403 | 69294532 | 69294403 | ID=MS.gene59593.t1.exon7;Parent=MS.gene59593.t1 |
| chr8.2 | CDS | 69294403 | 69294532 | 69294403 | ID=cds.MS.gene59593.t1;Parent=MS.gene59593.t1 |
| chr8.2 | exon | 69294127 | 69294320 | 69294127 | ID=MS.gene59593.t1.exon8;Parent=MS.gene59593.t1 |
| chr8.2 | CDS | 69294127 | 69294320 | 69294127 | ID=cds.MS.gene59593.t1;Parent=MS.gene59593.t1 |
| chr8.2 | exon | 69293838 | 69294022 | 69293838 | ID=MS.gene59593.t1.exon9;Parent=MS.gene59593.t1 |
| chr8.2 | CDS | 69293838 | 69294022 | 69293838 | ID=cds.MS.gene59593.t1;Parent=MS.gene59593.t1 |
| chr8.2 | exon | 69293293 | 69293420 | 69293293 | ID=MS.gene59593.t1.exon10;Parent=MS.gene59593.t1 |
| chr8.2 | CDS | 69293293 | 69293420 | 69293293 | ID=cds.MS.gene59593.t1;Parent=MS.gene59593.t1 |
| chr8.2 | exon | 69292109 | 69292395 | 69292109 | ID=MS.gene59593.t1.exon11;Parent=MS.gene59593.t1 |
| chr8.2 | CDS | 69292109 | 69292395 | 69292109 | ID=cds.MS.gene59593.t1;Parent=MS.gene59593.t1 |
| chr8.2 | exon | 69290852 | 69291089 | 69290852 | ID=MS.gene59593.t1.exon12;Parent=MS.gene59593.t1 |
| chr8.2 | CDS | 69290852 | 69291089 | 69290852 | ID=cds.MS.gene59593.t1;Parent=MS.gene59593.t1 |
| chr8.2 | exon | 69288852 | 69289600 | 69288852 | ID=MS.gene59593.t1.exon13;Parent=MS.gene59593.t1 |
| chr8.2 | CDS | 69288852 | 69289600 | 69288852 | ID=cds.MS.gene59593.t1;Parent=MS.gene59593.t1 |
| Gene Sequence |
| Protein sequence |
