AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052076

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052076.t1 MTR_2g097700 93.208 795 39 4 1 794 1 781 0.0 1462
MS.gene052076.t1 MTR_4g064780 78.726 691 147 0 104 794 114 804 0.0 1179
MS.gene052076.t1 MTR_4g064780 75.758 528 128 0 104 631 114 641 0.0 873
MS.gene052076.t1 MTR_5g013940 89.000 100 11 0 629 728 20 119 6.17e-57 192
MS.gene052076.t1 MTR_2g098110 24.597 496 315 19 294 778 210 657 4.58e-24 108
MS.gene052076.t1 MTR_1g070230 31.156 199 110 7 589 778 157 337 3.57e-13 72.0
MS.gene052076.t1 MTR_2g087590 30.968 155 92 3 629 778 200 344 2.18e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052076.t1 AT3G46740 76.377 690 163 0 105 794 129 818 0.0 1151
MS.gene052076.t1 AT4G09080 62.169 415 136 7 382 794 1 396 3.62e-171 499
MS.gene052076.t1 AT4G09080 62.169 415 136 7 382 794 12 407 7.32e-171 498
MS.gene052076.t1 AT4G09080 70.462 325 93 3 472 794 2 325 3.80e-160 468
MS.gene052076.t1 AT1G35860 49.419 516 138 8 258 769 3 399 2.88e-155 458
MS.gene052076.t1 AT5G19620 24.597 496 325 15 294 782 269 722 2.89e-25 112
MS.gene052076.t1 AT3G44160 28.194 227 131 8 540 750 102 312 2.90e-13 72.8

Find 261 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCGTTCATTTGGAGATTA+TGG 0.115100 2.2:+4820894 MS.gene052076:CDS
CTTCCCTGCTTCAATATTAA+AGG 0.116562 2.2:-4821487 None:intergenic
TCCTACCTCCAGCATGTTTC+TGG 0.139062 2.2:-4824160 None:intergenic
AATATTATATTATACCTCTT+TGG 0.227884 2.2:-4821166 None:intergenic
TGTGCTTCAGTGGTTAATTT+TGG 0.227908 2.2:+4821009 MS.gene052076:CDS
TTGTAACCCCTTACAGAATA+AGG 0.240655 2.2:-4824117 None:intergenic
GGTGGTGGTGGTTGGTGGTT+TGG 0.241659 2.2:+4820316 MS.gene052076:CDS
AGGCATAATTGTTGAAATTA+AGG 0.242334 2.2:+4821590 MS.gene052076:CDS
TGAAATGATTTCTATTGTTC+CGG 0.291518 2.2:+4820561 MS.gene052076:CDS
GGTGCATTATATTTACGTTT+TGG 0.299305 2.2:+4824476 MS.gene052076:CDS
CTAGGTTGTTGCAGAAGATT+AGG 0.307809 2.2:+4820947 MS.gene052076:CDS
ATATTATATTATACCTCTTT+GGG 0.310138 2.2:-4821165 None:intergenic
GGAGTATGCACATCCATATT+TGG 0.314750 2.2:+4822035 MS.gene052076:CDS
TGGATGAAGTGCCACCAATA+TGG 0.315749 2.2:+4822148 MS.gene052076:CDS
GGTGGACATGGTGGTGGTGG+TGG 0.322426 2.2:+4820277 MS.gene052076:CDS
TTATCTACACCATCCAAATA+TGG 0.337762 2.2:-4822048 None:intergenic
TTGGTGGCCCTTATTCTGTA+AGG 0.339722 2.2:+4824109 MS.gene052076:CDS
GTGGCAGTGGTGGTGGTGGT+TGG 0.342843 2.2:+4820308 MS.gene052076:CDS
ATCTCCAAATGAACGGTATT+CGG 0.343587 2.2:-4820889 None:intergenic
GAAGAAGTTGCTGGTTGTTA+TGG 0.346483 2.2:-4821874 None:intergenic
ACCGTTCATTTGGAGATTAT+GGG 0.350361 2.2:+4820895 MS.gene052076:CDS
GGTGGTGGTTGGTGGTTTGG+AGG 0.353180 2.2:+4820319 MS.gene052076:CDS
AGTAATGGTGGCAGTGGTGG+TGG 0.354370 2.2:+4820301 MS.gene052076:CDS
CCACAGAGTAAATTCACTTA+TGG 0.360623 2.2:+4822308 MS.gene052076:CDS
TTTGCCGAATACCGTTCATT+TGG 0.363887 2.2:+4820885 MS.gene052076:CDS
GCAGTGGTGGTGGTGGTTGG+TGG 0.370831 2.2:+4820311 MS.gene052076:CDS
GAGTTACGGATACCTGTTAA+AGG 0.374913 2.2:+4824281 MS.gene052076:CDS
AACCTCACAAACAACCTCTT+TGG 0.380682 2.2:-4821043 None:intergenic
ATGGGTCAAGGTTCATCTTA+TGG 0.381032 2.2:+4824392 MS.gene052076:CDS
GGAGGAAACGGAGGAGGAGG+AGG 0.384034 2.2:+4820340 MS.gene052076:CDS
GCAGAGCATGGGAATGATCT+AGG 0.384359 2.2:+4824323 MS.gene052076:CDS
GGAGGAGGAAACGGAGGAGG+AGG 0.387801 2.2:+4820337 MS.gene052076:CDS
GTTGCAGAAGATTAGGGATA+AGG 0.390963 2.2:+4820954 MS.gene052076:CDS
GGTAATCAAATTTGTGCAAA+TGG 0.394320 2.2:+4822365 MS.gene052076:CDS
GTCAGGAGAGGGAGTATAAG+AGG 0.396728 2.2:+4820836 MS.gene052076:CDS
TTTGAAAAGGTTGATCTTGA+AGG 0.399772 2.2:+4820646 MS.gene052076:CDS
TTTCATATAGTGAGAGTACT+TGG 0.399955 2.2:+4820704 MS.gene052076:CDS
AAGAAAGGAGTTTGAGTGCT+AGG 0.400808 2.2:+4820929 MS.gene052076:CDS
TACACATGCATGCCTTTAAC+AGG 0.406430 2.2:-4824293 None:intergenic
GGTGGTTGGTGGTTTGGAGG+AGG 0.407252 2.2:+4820322 MS.gene052076:CDS
ATTCACTTATGGACTTGTAA+TGG 0.409835 2.2:+4822319 MS.gene052076:CDS
CCACCGCGATCAACCCATAT+TGG 0.412791 2.2:-4822162 None:intergenic
TGGTGGTTTGGAGGAGGAAA+CGG 0.413877 2.2:+4820328 MS.gene052076:CDS
GAAATGATTTCTATTGTTCC+GGG 0.419998 2.2:+4820562 MS.gene052076:CDS
AGTTGGTGGCGATTGAAGAA+TGG 0.421149 2.2:-4823955 None:intergenic
GGTGGTGGACATGGTGGTGG+TGG 0.421380 2.2:+4820274 MS.gene052076:CDS
TCACTAGTCTCATCAGGCCT+TGG 0.424601 2.2:-4821564 None:intergenic
GGCGATTGAAGAATGGGAAC+TGG 0.425859 2.2:-4823948 None:intergenic
AACACCTTTAATATTGAAGC+AGG 0.427152 2.2:+4821483 MS.gene052076:CDS
TGAATACTGGACTCAGCTTT+CGG 0.430080 2.2:-4822110 None:intergenic
ACTGGTGGTGGACATGGTGG+TGG 0.430184 2.2:+4820271 MS.gene052076:CDS
CTTCCTCCACAGACATCAAC+TGG 0.431035 2.2:-4823996 None:intergenic
GACGGCAATGGCAGCGGCGG+AGG 0.431131 2.2:-4820212 None:intergenic
GGAAGTAATGGTGGCAGTGG+TGG 0.431759 2.2:+4820298 MS.gene052076:CDS
TGGTGGCCCTTATTCTGTAA+GGG 0.436401 2.2:+4824110 MS.gene052076:CDS
CACAGCTTGCAGCTGAGTTA+CGG 0.437484 2.2:+4824267 MS.gene052076:intron
GGCGCAACTACAGAAGGAAT+TGG 0.439427 2.2:+4820600 MS.gene052076:CDS
AATGGCAGCGGCGGAGGAAA+CGG 0.440792 2.2:-4820206 None:intergenic
ATTGGATTAACAGCTGCGTC+CGG 0.441537 2.2:+4821458 MS.gene052076:intron
CCTACCAGCCTCGGTGGTAC+TGG 0.441855 2.2:+4822431 MS.gene052076:CDS
AATTGAATAGTTATATTGAC+AGG 0.454818 2.2:-4820442 None:intergenic
CAAGGTTCATCTTATGGTGT+TGG 0.455140 2.2:+4824398 MS.gene052076:CDS
CCTCCCTCACTAGTCTCATC+AGG 0.456399 2.2:-4821570 None:intergenic
AACGGCGACGGTGGCGGTGA+GGG 0.457185 2.2:-4820188 None:intergenic
GGTGGTGGTGGTGGAAGTAA+TGG 0.462440 2.2:+4820286 MS.gene052076:CDS
GTTGGTGGCGATTGAAGAAT+GGG 0.462764 2.2:-4823954 None:intergenic
TGTTGGTGCCAAGCTTGGTT+TGG 0.462992 2.2:+4824415 MS.gene052076:CDS
TGCTCTGACCAAACCAAGCT+TGG 0.463681 2.2:-4824423 None:intergenic
GTTCAGTTCATTGATAAGCT+TGG 0.463790 2.2:+4821093 MS.gene052076:CDS
AATGGTGGCAGTGGTGGTGG+TGG 0.465319 2.2:+4820304 MS.gene052076:CDS
CTTGTCCTCCATGGCCGCTA+TGG 0.467464 2.2:+4824045 MS.gene052076:CDS
CTGAGGGTTGAAGAAGTTGC+TGG 0.470561 2.2:-4821883 None:intergenic
TTTGGAGGAGGAAACGGAGG+AGG 0.471711 2.2:+4820334 MS.gene052076:CDS
GTGTTGCCGTAGAGGAAAAC+GGG 0.473372 2.2:-4820247 None:intergenic
TGGTGGCACTTCATCCAGCC+CGG 0.473493 2.2:-4822142 None:intergenic
TTTGAAGACACGGCGGCGAC+GGG 0.474675 2.2:-4820164 None:intergenic
GGATGATCTTGCATTTAAGA+TGG 0.475394 2.2:+4822014 MS.gene052076:intron
CGGCCATGGAGGACAAGAAC+TGG 0.475573 2.2:-4824039 None:intergenic
TTTGCGACGGCCGGATAAGA+TGG 0.476584 2.2:-4820092 None:intergenic
CAGAAGTGGTATCATGATCA+AGG 0.480113 2.2:+4820979 MS.gene052076:CDS
GTTGATCATAACTCAGGAAC+TGG 0.481477 2.2:+4824455 MS.gene052076:CDS
TTCGGCGGCACCATCTTATC+CGG 0.481622 2.2:+4820082 MS.gene052076:CDS
TATGGTGTTGGTGCCAAGCT+TGG 0.481755 2.2:+4824410 MS.gene052076:CDS
GGTTACAACATGGGTGAACT+TGG 0.484076 2.2:+4824132 MS.gene052076:CDS
GGAGGAAACGGCGACGGTGG+CGG 0.484981 2.2:-4820194 None:intergenic
AAGCTGAGTCCAGTATTCAC+TGG 0.485593 2.2:+4822114 MS.gene052076:CDS
TAGGTTGTTGCAGAAGATTA+GGG 0.486333 2.2:+4820948 MS.gene052076:CDS
ACATGAAGAGTTCGGTTTCG+TGG 0.486346 2.2:-4822072 None:intergenic
TGAAATTAAGGTAAAAGAGA+TGG 0.486682 2.2:+4821602 MS.gene052076:CDS
GGAAGCTCTCTATGTATCAC+AGG 0.487037 2.2:-4821144 None:intergenic
CACAACCACCATAGCGGCCA+TGG 0.488369 2.2:-4824053 None:intergenic
GGTGGAAGTAATGGTGGCAG+TGG 0.488956 2.2:+4820295 MS.gene052076:CDS
GTTCAGGCCTCACTTCAACC+TGG 0.489926 2.2:+4821792 MS.gene052076:intron
GGTGTTGCCGTAGAGGAAAA+CGG 0.489984 2.2:-4820248 None:intergenic
GGTGAAACAGTATTTGAGTC+AGG 0.490823 2.2:+4820819 MS.gene052076:CDS
TCTGAAGAATTTGATTCTCA+TGG 0.491097 2.2:+4820415 MS.gene052076:CDS
ACGGCGACGGTGGCGGTGAG+GGG 0.492240 2.2:-4820187 None:intergenic
TTGGATAGTTTGACATCTAG+TGG 0.493950 2.2:+4820619 MS.gene052076:CDS
GTTGGATACCCTCCACGTCC+AGG 0.494002 2.2:-4821666 None:intergenic
GTTTGAAGACACGGCGGCGA+CGG 0.494402 2.2:-4820165 None:intergenic
TTTGTGAATGGAGCTGTAGT+TGG 0.494735 2.2:+4822506 MS.gene052076:CDS
ATTCGCCTATAGACTTCTGT+AGG 0.494760 2.2:-4824371 None:intergenic
CCGCCAGTTCTTGTCCTCCA+TGG 0.495151 2.2:+4824036 MS.gene052076:CDS
TACGGCAACACCACTGGTGG+TGG 0.496015 2.2:+4820259 MS.gene052076:CDS
GAGAGCAGTTGATGCATTGA+GGG 0.496333 2.2:-4820135 None:intergenic
GAGGGAGTATAAGAGGAGGA+TGG 0.496741 2.2:+4820843 MS.gene052076:CDS
GGAACCCTACAGAAGTCTAT+AGG 0.496842 2.2:+4824366 MS.gene052076:CDS
TTCCTCTACGGCAACACCAC+TGG 0.497773 2.2:+4820253 MS.gene052076:CDS
AGCTGAGTCCAGTATTCACT+GGG 0.498536 2.2:+4822115 MS.gene052076:CDS
TTCTGTAAGGGGTTACAACA+TGG 0.498736 2.2:+4824122 MS.gene052076:CDS
GGTGGCACTTCATCCAGCCC+GGG 0.498938 2.2:-4822141 None:intergenic
AACAGCTTACATGAAGAGTT+CGG 0.499486 2.2:-4822080 None:intergenic
TGAGAGCAGTTGATGCATTG+AGG 0.500721 2.2:-4820136 None:intergenic
GTTAAAGGCATGCATGTGTA+TGG 0.502109 2.2:+4824296 MS.gene052076:CDS
TGTAACCCCTTACAGAATAA+GGG 0.504000 2.2:-4824116 None:intergenic
AAGTTTCGTTGTATTAATGT+TGG 0.504797 2.2:+4820739 MS.gene052076:CDS
TGGGTATGATGAGGAAAGAA+AGG 0.507440 2.2:+4820914 MS.gene052076:CDS
GGATGAAGTGCCACCAATAT+GGG 0.507612 2.2:+4822149 MS.gene052076:CDS
ATATCAGAATCCAACTCAAT+CGG 0.509396 2.2:-4820781 None:intergenic
CGATGGAACTGTTGGAATCA+CGG 0.511659 2.2:+4820681 MS.gene052076:CDS
AACACCACTGGTGGTGGACA+TGG 0.516543 2.2:+4820265 MS.gene052076:CDS
GATGGTGCCGCCGAAGTTGT+TGG 0.516602 2.2:-4820074 None:intergenic
TTGAAAAGGTTGATCTTGAA+GGG 0.520120 2.2:+4820647 MS.gene052076:CDS
TGGAGCGAGAAATATGTTCC+AGG 0.520832 2.2:+4822526 MS.gene052076:CDS
CAGAAGTACAATACCAGAGT+TGG 0.521701 2.2:-4821684 None:intergenic
TGCAAACTGCAGGTAGATCA+AGG 0.522633 2.2:+4823910 MS.gene052076:intron
ACAAATGCCGATGGAACTGT+TGG 0.524279 2.2:+4820673 MS.gene052076:CDS
GGTGGTGGTGGAAGTAATGG+TGG 0.524691 2.2:+4820289 MS.gene052076:CDS
ACAGAAGTCTATAGGCGAAT+GGG 0.524829 2.2:+4824374 MS.gene052076:CDS
CGGCTGATGTCAGTACTGAA+TGG 0.529553 2.2:+4821634 MS.gene052076:CDS
CGGTGAGGGGTTTGAAGACA+CGG 0.531059 2.2:-4820174 None:intergenic
AACGGGTTTGTTAGAGTGGA+CGG 0.532988 2.2:-4820230 None:intergenic
GTAGATCAAGGCCTAGGCAT+TGG 0.533049 2.2:+4823922 MS.gene052076:CDS
GGTGGCCCTTATTCTGTAAG+GGG 0.535538 2.2:+4824111 MS.gene052076:CDS
GTTGTTTGTGAGGTTGTTGA+AGG 0.535781 2.2:+4821051 MS.gene052076:CDS
CTCGTTCCATCCAACAACTT+CGG 0.537018 2.2:+4820064 MS.gene052076:CDS
AATGCCAGTACCACCGAGGC+TGG 0.537268 2.2:-4822435 None:intergenic
GGAAGTTCAAAGGATGTCAA+AGG 0.537541 2.2:+4824344 MS.gene052076:CDS
AGAGTGGACGGCAATGGCAG+CGG 0.537605 2.2:-4820218 None:intergenic
GTCTATAGGCGAATGGGTCA+AGG 0.538287 2.2:+4824380 MS.gene052076:CDS
GTATAAGAGGAGGATGGAGA+AGG 0.538995 2.2:+4820849 MS.gene052076:CDS
AGAGTAAAAGCATCATAACT+TGG 0.539501 2.2:-4824087 None:intergenic
TACCAAAGAGGTTGTTTGTG+AGG 0.542702 2.2:+4821041 MS.gene052076:CDS
GCAGACTAAGCCGATTGAGT+TGG 0.544330 2.2:+4820771 MS.gene052076:CDS
CACCAGTGGTGTTGCCGTAG+AGG 0.545329 2.2:-4820255 None:intergenic
TTGGATTAACAGCTGCGTCC+GGG 0.545816 2.2:+4821459 MS.gene052076:intron
AGGGTATGCTTGTGCTTCAG+TGG 0.546401 2.2:+4820999 MS.gene052076:CDS
GGAAAACGGGTTTGTTAGAG+TGG 0.546885 2.2:-4820234 None:intergenic
TGGTGCTGCCAGAAACATGC+TGG 0.547041 2.2:+4824152 MS.gene052076:CDS
TACAGAAGTCTATAGGCGAA+TGG 0.548050 2.2:+4824373 MS.gene052076:CDS
CCAGTACCACCGAGGCTGGT+AGG 0.550717 2.2:-4822431 None:intergenic
CTGATATGACTGAGAAGGAG+AGG 0.551839 2.2:+4820797 MS.gene052076:CDS
ATCTAGTGGAATGTTTGAAA+AGG 0.552613 2.2:+4820633 MS.gene052076:CDS
GTCCTCCATGGCCGCTATGG+TGG 0.553018 2.2:+4824048 MS.gene052076:CDS
AGAGGAGGATGGAGAAGGCT+AGG 0.553607 2.2:+4820854 MS.gene052076:CDS
GGCGGAGGAAACGGCGACGG+TGG 0.554681 2.2:-4820197 None:intergenic
GAAGTTCAAAGGATGTCAAA+GGG 0.555525 2.2:+4824345 MS.gene052076:CDS
GATGGACCTCCTACCAGCCT+CGG 0.558209 2.2:+4822422 MS.gene052076:CDS
CTGCAGGTAGATCAAGGCCT+AGG 0.558852 2.2:+4823916 MS.gene052076:intron
ACGTGGAGGGTATCCAACTC+TGG 0.559551 2.2:+4821671 MS.gene052076:CDS
TGGAAATCTTAATACCAAAG+AGG 0.562046 2.2:+4821029 MS.gene052076:CDS
TTTGTTAGAGTGGACGGCAA+TGG 0.562349 2.2:-4820224 None:intergenic
GTTGATGCATTGAGGGAGAG+AGG 0.563859 2.2:-4820128 None:intergenic
TTGATGCATTGAGGGAGAGA+GGG 0.564365 2.2:-4820127 None:intergenic
CCGCGATCAACCCATATTGG+TGG 0.564600 2.2:-4822159 None:intergenic
GCCCTTGTGTAAACTCCGCC+CGG 0.565154 2.2:-4820580 None:intergenic
AAGCTTGGCAATGTTGTTGA+AGG 0.565864 2.2:+4821108 MS.gene052076:CDS
GGAACTGGGTGCCAATGCCT+AGG 0.567234 2.2:-4823933 None:intergenic
CATGGAGGACAAGAACTGGC+GGG 0.567265 2.2:-4824035 None:intergenic
GTTTATCCAGTTGATGTCTG+TGG 0.574004 2.2:+4823990 MS.gene052076:CDS
CACAAGGGCGCAACTACAGA+AGG 0.574798 2.2:+4820594 MS.gene052076:CDS
TCATCAGCAATAGCTGCTGC+CGG 0.576186 2.2:-4820385 None:intergenic
TTCCGGGCGGAGTTTACACA+AGG 0.577272 2.2:+4820578 MS.gene052076:CDS
AAGACACGGCGGCGACGGGA+AGG 0.577840 2.2:-4820160 None:intergenic
GGACTGAATAGAGCTCTTAG+TGG 0.577947 2.2:+4821849 MS.gene052076:CDS
AGCGGCGGAGGAAACGGCGA+CGG 0.578205 2.2:-4820200 None:intergenic
CAGCAACTTCTTCAACCCTC+AGG 0.579110 2.2:+4821884 MS.gene052076:CDS
GGATGGAACGAGAGAAGACA+TGG 0.579164 2.2:-4820053 None:intergenic
AGGAGAGGGAGTATAAGAGG+AGG 0.581109 2.2:+4820839 MS.gene052076:CDS
TTTGAGCATCGGAATCTGCA+AGG 0.581527 2.2:+4821828 MS.gene052076:CDS
ACGGTATTCGGCAAAATACA+CGG 0.581738 2.2:-4820877 None:intergenic
CGTGATTCCAACAGTTCCAT+CGG 0.582065 2.2:-4820680 None:intergenic
AACAGTATTTGAGTCAGGAG+AGG 0.582697 2.2:+4820824 MS.gene052076:CDS
CGAATATTGAGGTTAATCCA+AGG 0.584035 2.2:+4821547 MS.gene052076:CDS
TTGGATACCCTCCACGTCCA+GGG 0.585173 2.2:-4821665 None:intergenic
ACTGAATGGAGTATTATCCC+TGG 0.586150 2.2:+4821648 MS.gene052076:CDS
CAGTTGATGTCTGTGGAGGA+AGG 0.588557 2.2:+4823997 MS.gene052076:CDS
ACATAGAGAGCTTCCCAAAG+AGG 0.590094 2.2:+4821152 MS.gene052076:CDS
TGGTTTGGAGGAGGAAACGG+AGG 0.591098 2.2:+4820331 MS.gene052076:CDS
CTCTACGGCAACACCACTGG+TGG 0.591852 2.2:+4820256 MS.gene052076:CDS
ATGTCTGTGGAGGAAGGAGC+TGG 0.592623 2.2:+4824003 MS.gene052076:CDS
AAACGGCGACGGTGGCGGTG+AGG 0.592870 2.2:-4820189 None:intergenic
TTCATATAGTGAGAGTACTT+GGG 0.593668 2.2:+4820705 MS.gene052076:CDS
TGGAGTATTATCCCTGGACG+TGG 0.594319 2.2:+4821654 MS.gene052076:CDS
ACCCATAATCTCCAAATGAA+CGG 0.594361 2.2:-4820896 None:intergenic
GTGGACGGCAATGGCAGCGG+CGG 0.594818 2.2:-4820215 None:intergenic
GGATTCTGATATGACTGAGA+AGG 0.595424 2.2:+4820792 MS.gene052076:CDS
GCGATTGAAGAATGGGAACT+GGG 0.595882 2.2:-4823947 None:intergenic
GGCCGCTATGGTGGTTGTGT+AGG 0.596201 2.2:+4824057 MS.gene052076:CDS
TCTGTAAGGGGTTACAACAT+GGG 0.597256 2.2:+4824123 MS.gene052076:CDS
TGGAGGACAAGAACTGGCGG+GGG 0.598639 2.2:-4824033 None:intergenic
ACCGTGTCAGAGTTAGTTGG+TGG 0.599851 2.2:-4823969 None:intergenic
GGTGGTGGAATTAGTGCAGA+TGG 0.600249 2.2:+4822404 MS.gene052076:CDS
TGGTACTGGCATTGATCACA+TGG 0.604743 2.2:+4822445 MS.gene052076:CDS
TATGCACATCCATATTTGGA+TGG 0.605774 2.2:+4822039 MS.gene052076:CDS
AACTCAATCGGCTTAGTCTG+CGG 0.606110 2.2:-4820769 None:intergenic
ACAGTATTTGAGTCAGGAGA+GGG 0.607068 2.2:+4820825 MS.gene052076:CDS
CAAAGAGTACTACCTGGTGG+TGG 0.609512 2.2:+4822389 MS.gene052076:CDS
GTGCCGCCGAAGTTGTTGGA+TGG 0.609553 2.2:-4820070 None:intergenic
TAAACCGTGTCAGAGTTAGT+TGG 0.610131 2.2:-4823972 None:intergenic
TTCGCCTATAGACTTCTGTA+GGG 0.610421 2.2:-4824370 None:intergenic
GTACCACCGAGGCTGGTAGG+AGG 0.612805 2.2:-4822428 None:intergenic
TGGAGATTATGGGTATGATG+AGG 0.614636 2.2:+4820905 MS.gene052076:CDS
ATGGAGGACAAGAACTGGCG+GGG 0.616107 2.2:-4824034 None:intergenic
GTATTATCCCTGGACGTGGA+GGG 0.616682 2.2:+4821658 MS.gene052076:CDS
ACCACCATGTCCACCACCAG+TGG 0.617417 2.2:-4820269 None:intergenic
ACCACTGGTGGTGGACATGG+TGG 0.617692 2.2:+4820268 MS.gene052076:CDS
AAAAGAGATGGATCAGAAGA+CGG 0.620917 2.2:+4821614 MS.gene052076:CDS
AGTATTATCCCTGGACGTGG+AGG 0.623139 2.2:+4821657 MS.gene052076:CDS
GTGGCACTTCATCCAGCCCG+GGG 0.624430 2.2:-4822140 None:intergenic
CCATGGAGGACAAGAACTGG+CGG 0.627462 2.2:-4824036 None:intergenic
GAATGATCTAGGAAGTTCAA+AGG 0.628689 2.2:+4824334 MS.gene052076:CDS
AGAAGTGGTATCATGATCAA+GGG 0.628769 2.2:+4820980 MS.gene052076:CDS
TATCCAGTTGATGTCTGTGG+AGG 0.628813 2.2:+4823993 MS.gene052076:CDS
AGGCCTGATGAGACTAGTGA+GGG 0.628874 2.2:+4821567 MS.gene052076:CDS
GAAGGGAAGACAAATGCCGA+TGG 0.629741 2.2:+4820664 MS.gene052076:CDS
TATGCCGTTGATCATAACTC+AGG 0.630071 2.2:+4824449 MS.gene052076:CDS
GAAGCTCTCTATGTATCACA+GGG 0.631275 2.2:-4821143 None:intergenic
TGATATGACTGAGAAGGAGA+GGG 0.631555 2.2:+4820798 MS.gene052076:CDS
TTAGGGATAAGGTTCAGAAG+TGG 0.635116 2.2:+4820965 MS.gene052076:CDS
GAGATAACAACTCGTGACGA+AGG 0.635863 2.2:+4822344 MS.gene052076:CDS
CAGGCCTCACTTCAACCTGG+TGG 0.639154 2.2:+4821795 MS.gene052076:intron
TCAATATTAAAGGTGTTACC+CGG 0.639699 2.2:-4821477 None:intergenic
ACACCTTTAATATTGAAGCA+GGG 0.649166 2.2:+4821484 MS.gene052076:CDS
ATATAGTGAGAGTACTTGGG+AGG 0.649290 2.2:+4820708 MS.gene052076:CDS
CCAATATGGGTTGATCGCGG+TGG 0.652292 2.2:+4822162 MS.gene052076:CDS
AGTTCCTGAGTTATGATCAA+CGG 0.653436 2.2:-4824453 None:intergenic
TCAAAAGAAATAGTTCCACC+AGG 0.657409 2.2:-4821810 None:intergenic
AAGGCCTGATGAGACTAGTG+AGG 0.658789 2.2:+4821566 MS.gene052076:CDS
CCTGATGAGACTAGTGAGGG+AGG 0.666702 2.2:+4821570 MS.gene052076:CDS
ATTCAATTGAACAAACTCAG+TGG 0.672368 2.2:+4820457 MS.gene052076:CDS
GTTCCATCCAACAACTTCGG+CGG 0.677116 2.2:+4820067 MS.gene052076:CDS
AGTTCCACCAGGTTGAAGTG+AGG 0.678160 2.2:-4821799 None:intergenic
GCCACCAACTAACTCTGACA+CGG 0.681112 2.2:+4823968 MS.gene052076:CDS
AATGGTCAAAGAGTACTACC+TGG 0.681459 2.2:+4822383 MS.gene052076:CDS
TCCGGGCGGAGTTTACACAA+GGG 0.682002 2.2:+4820579 MS.gene052076:CDS
CCACCAATATGGGTTGATCG+CGG 0.691172 2.2:+4822159 MS.gene052076:CDS
TGTCAAAGCTAATATTACAG+AGG 0.693959 2.2:+4822185 MS.gene052076:CDS
CTGAGTCCAGTATTCACTGG+GGG 0.694649 2.2:+4822117 MS.gene052076:CDS
CGCCTACACAACCACCATAG+CGG 0.696532 2.2:-4824059 None:intergenic
AACCACCATAGCGGCCATGG+AGG 0.698443 2.2:-4824050 None:intergenic
TCTGCACTAATTCCACCACC+AGG 0.699846 2.2:-4822401 None:intergenic
GGACCTCCTACCAGCCTCGG+TGG 0.704909 2.2:+4822425 MS.gene052076:CDS
ATGATTTCTATTGTTCCGGG+CGG 0.716023 2.2:+4820565 MS.gene052076:CDS
CCATAAGTGAATTTACTCTG+TGG 0.720329 2.2:-4822308 None:intergenic
GGTCAAAGAGTACTACCTGG+TGG 0.755451 2.2:+4822386 MS.gene052076:CDS
TGCTGCCAGAAACATGCTGG+AGG 0.768164 2.2:+4824155 MS.gene052076:CDS
GATCAATGCCAGTACCACCG+AGG 0.774073 2.2:-4822439 None:intergenic
GCTGAGTCCAGTATTCACTG+GGG 0.777122 2.2:+4822116 MS.gene052076:CDS
TGAGGGGTTTGAAGACACGG+CGG 0.801528 2.2:-4820171 None:intergenic
AAGCTCTCTATGTATCACAG+GGG 0.819683 2.2:-4821142 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAAAATATATTTTTAA+AGG + chr2.2:4823762-4823781 MS.gene052076:intron 0.0%
!!! TTTATATAAAATCAATTTTG+TGG - chr2.2:4823735-4823754 None:intergenic 10.0%
!! AACATAATTGATTACTAAAA+AGG + chr2.2:4823671-4823690 MS.gene052076:intron 15.0%
!! AATATTATATTATACCTCTT+TGG - chr2.2:4821169-4821188 None:intergenic 15.0%
!! ATATTATATTATACCTCTTT+GGG - chr2.2:4821168-4821187 None:intergenic 15.0%
!! TAAATTCTAACAAAAGTAAT+AGG - chr2.2:4823362-4823381 None:intergenic 15.0%
!! TTGTTATCTGTTATATATAT+GGG + chr2.2:4821219-4821238 MS.gene052076:intron 15.0%
!!! AATAATTGATATTTCTAGTA+TGG + chr2.2:4821302-4821321 MS.gene052076:intron 15.0%
!!! CACATTAAAAAATTTGTTTT+AGG + chr2.2:4823786-4823805 MS.gene052076:intron 15.0%
!!! CTAAAACAAATTTTTTAATG+TGG - chr2.2:4823788-4823807 None:intergenic 15.0%
!!! TAACCAAATTAATTTTTTAG+AGG - chr2.2:4823611-4823630 None:intergenic 15.0%
!!! TATTTTTACATGAACTATTT+AGG + chr2.2:4822227-4822246 MS.gene052076:intron 15.0%
!! AAGGCTTAAAGATAATAAAA+AGG - chr2.2:4822642-4822661 None:intergenic 20.0%
!! AATTGAATAGTTATATTGAC+AGG - chr2.2:4820445-4820464 None:intergenic 20.0%
!! ACACAATTAGAAAATATACA+AGG - chr2.2:4822794-4822813 None:intergenic 20.0%
!! ATACAATTATAAGAGGAAAA+AGG - chr2.2:4822661-4822680 None:intergenic 20.0%
!! ATTGAAATGAAAGAACATTT+AGG - chr2.2:4822868-4822887 None:intergenic 20.0%
!! CAAAATTATGTGTGAAAAAA+AGG + chr2.2:4823585-4823604 MS.gene052076:intron 20.0%
!! CATGTAAGCAAATAATAAAA+AGG - chr2.2:4822608-4822627 None:intergenic 20.0%
!! GTTGTTATCTGTTATATATA+TGG + chr2.2:4821218-4821237 MS.gene052076:intron 20.0%
!! TTGAAATGAAAGAACATTTA+GGG - chr2.2:4822867-4822886 None:intergenic 20.0%
!! TTTACCAATACAATTATAAG+AGG - chr2.2:4822668-4822687 None:intergenic 20.0%
!!! CTTTTTATTATTTGCTTACA+TGG + chr2.2:4822606-4822625 MS.gene052076:intron 20.0%
!!! TGTTTTATCAATATTGATAC+TGG + chr2.2:4821960-4821979 MS.gene052076:intron 20.0%
!!! TTTTCCTCTTATAATTGTAT+TGG + chr2.2:4822661-4822680 MS.gene052076:intron 20.0%
!!! TTTTTTCACACATAATTTTG+AGG - chr2.2:4823585-4823604 None:intergenic 20.0%
! AAGTTTCGTTGTATTAATGT+TGG + chr2.2:4820739-4820758 MS.gene052076:CDS 25.0%
! AGAAAAAAATAGTCCATCAA+CGG - chr2.2:4822925-4822944 None:intergenic 25.0%
! AGGCAAATAATCATTGAAAT+TGG - chr2.2:4821338-4821357 None:intergenic 25.0%
! AGGCATAATTGTTGAAATTA+AGG + chr2.2:4821590-4821609 MS.gene052076:CDS 25.0%
! AGTCTTAAATAGAAAACATC+AGG - chr2.2:4823834-4823853 None:intergenic 25.0%
! CTTATTGTTGTCAATTTAGA+GGG + chr2.2:4821256-4821275 MS.gene052076:intron 25.0%
! CTTTGGATCAATATAAAAGT+TGG + chr2.2:4823035-4823054 MS.gene052076:intron 25.0%
! GGATATATAAGACTGAATAT+TGG - chr2.2:4822773-4822792 None:intergenic 25.0%
! GTCTTAAATAGAAAACATCA+GGG - chr2.2:4823833-4823852 None:intergenic 25.0%
! TCTTATTGTTGTCAATTTAG+AGG + chr2.2:4821255-4821274 MS.gene052076:intron 25.0%
! TGAAATGATTTCTATTGTTC+CGG + chr2.2:4820561-4820580 MS.gene052076:CDS 25.0%
! TGAAATTAAGGTAAAAGAGA+TGG + chr2.2:4821602-4821621 MS.gene052076:CDS 25.0%
! TGATAAAGAATCATAAAACG+AGG - chr2.2:4824194-4824213 None:intergenic 25.0%
! TTATCTGTTATATATATGGG+AGG + chr2.2:4821222-4821241 MS.gene052076:intron 25.0%
!! AGGCCTCTAAAAAATTAATT+TGG + chr2.2:4823605-4823624 MS.gene052076:intron 25.0%
!! CAACTTTTATATTGATCCAA+AGG - chr2.2:4823037-4823056 None:intergenic 25.0%
!! TTTTTATATATGCAAACTGC+AGG + chr2.2:4823900-4823919 MS.gene052076:intron 25.0%
!!! ATTGCTTTTCAATTTTGTTC+AGG + chr2.2:4821776-4821795 MS.gene052076:intron 25.0%
!!! ATTTTGATCATTACAGCAAA+AGG - chr2.2:4823186-4823205 None:intergenic 25.0%
!!! TTCTTTGTTTTCGAATATTG+AGG + chr2.2:4821536-4821555 MS.gene052076:CDS 25.0%
AAAAAGGCTTCAATTACTCT+TGG + chr2.2:4823687-4823706 MS.gene052076:intron 30.0%
AACACCTTTAATATTGAAGC+AGG + chr2.2:4821483-4821502 MS.gene052076:CDS 30.0%
AAGAAGCGAAAAACAAAAGT+TGG + chr2.2:4820520-4820539 MS.gene052076:CDS 30.0%
ACACCTTTAATATTGAAGCA+GGG + chr2.2:4821484-4821503 MS.gene052076:CDS 30.0%
ACATGAACTATTTAGGCTAA+TGG + chr2.2:4822234-4822253 MS.gene052076:intron 30.0%
ATATCAGAATCCAACTCAAT+CGG - chr2.2:4820784-4820803 None:intergenic 30.0%
ATCATCCTATTTAGATCCTA+TGG + chr2.2:4822886-4822905 MS.gene052076:intron 30.0%
ATCTAGTGGAATGTTTGAAA+AGG + chr2.2:4820633-4820652 MS.gene052076:CDS 30.0%
ATTCAATTGAACAAACTCAG+TGG + chr2.2:4820457-4820476 MS.gene052076:CDS 30.0%
ATTCACTTATGGACTTGTAA+TGG + chr2.2:4822319-4822338 MS.gene052076:CDS 30.0%
CAATGATTATTTGCCTGTTT+AGG + chr2.2:4821342-4821361 MS.gene052076:intron 30.0%
CAGGAAAAAAAAAAATCCCT+TGG - chr2.2:4821739-4821758 None:intergenic 30.0%
GAAAAAAAAAAATCCCTTGG+TGG - chr2.2:4821736-4821755 None:intergenic 30.0%
GAAATGATTTCTATTGTTCC+GGG + chr2.2:4820562-4820581 MS.gene052076:CDS 30.0%
GGTAATCAAATTTGTGCAAA+TGG + chr2.2:4822365-4822384 MS.gene052076:CDS 30.0%
GTAAACCTATCTACAAAGAT+AGG + chr2.2:4823061-4823080 MS.gene052076:intron 30.0%
GTAGTCACATAAAACAAGAT+AGG - chr2.2:4822691-4822710 None:intergenic 30.0%
GTTAACCATAGGATCTAAAT+AGG - chr2.2:4822894-4822913 None:intergenic 30.0%
TATATATATGGGAGGTTCAT+AGG + chr2.2:4821230-4821249 MS.gene052076:intron 30.0%
TATATCCTAAAACTGCTCAT+TGG + chr2.2:4821406-4821425 MS.gene052076:intron 30.0%
TCTGAAGAATTTGATTCTCA+TGG + chr2.2:4820415-4820434 MS.gene052076:CDS 30.0%
TGGAAATCTTAATACCAAAG+AGG + chr2.2:4821029-4821048 MS.gene052076:CDS 30.0%
TGTCAAAGCTAATATTACAG+AGG + chr2.2:4822185-4822204 MS.gene052076:CDS 30.0%
TTATCTACACCATCCAAATA+TGG - chr2.2:4822051-4822070 None:intergenic 30.0%
! AAAGTATCACTCAGGTTAAA+AGG - chr2.2:4822828-4822847 None:intergenic 30.0%
! ACAAGATATCTATGTTTTCC+AGG + chr2.2:4823519-4823538 MS.gene052076:intron 30.0%
! ACTTTAAAGACAGTTAGTGA+CGG - chr2.2:4822564-4822583 None:intergenic 30.0%
! AGTTATGATGCTTTTACTCT+TGG + chr2.2:4824090-4824109 MS.gene052076:CDS 30.0%
! CAAGATATCTATGTTTTCCA+GGG + chr2.2:4823520-4823539 MS.gene052076:intron 30.0%
! CCTTTTCCATTATATGATGT+CGG + chr2.2:4823407-4823426 MS.gene052076:intron 30.0%
! GGTGCATTATATTTACGTTT+TGG + chr2.2:4824476-4824495 MS.gene052076:CDS 30.0%
! TAAAACCAATGAGCAGTTTT+AGG - chr2.2:4821414-4821433 None:intergenic 30.0%
! TATTTGCCTGTTTAGGATAT+CGG + chr2.2:4821349-4821368 MS.gene052076:intron 30.0%
! TTGAAAAGGTTGATCTTGAA+GGG + chr2.2:4820647-4820666 MS.gene052076:CDS 30.0%
! TTTGAAAAGGTTGATCTTGA+AGG + chr2.2:4820646-4820665 MS.gene052076:CDS 30.0%
!! AGAGTAAAAGCATCATAACT+TGG - chr2.2:4824090-4824109 None:intergenic 30.0%
!! GAACTATTTCTTTTGAGCAT+CGG + chr2.2:4821817-4821836 MS.gene052076:CDS 30.0%
!! TCAATATTAAAGGTGTTACC+CGG - chr2.2:4821480-4821499 None:intergenic 30.0%
!! TGTCTTTAAAGTTGCATACA+TGG + chr2.2:4822572-4822591 MS.gene052076:intron 30.0%
!! TTCATATAGTGAGAGTACTT+GGG + chr2.2:4820705-4820724 MS.gene052076:CDS 30.0%
!! TTTCATATAGTGAGAGTACT+TGG + chr2.2:4820704-4820723 MS.gene052076:CDS 30.0%
!!! TATATTTACGTTTTGGAGAG+AGG + chr2.2:4824483-4824502 MS.gene052076:CDS 30.0%
AAAAAATAGTCCATCAACGG+AGG - chr2.2:4822922-4822941 None:intergenic 35.0%
AAAAGAGATGGATCAGAAGA+CGG + chr2.2:4821614-4821633 MS.gene052076:CDS 35.0%
AACAGCTTACATGAAGAGTT+CGG - chr2.2:4822083-4822102 None:intergenic 35.0%
AAGTAGCCGACATCATATAA+TGG - chr2.2:4823416-4823435 None:intergenic 35.0%
AATGTGTAGTTAGAGCTCAA+TGG - chr2.2:4823452-4823471 None:intergenic 35.0%
ACAAAGATAGGAGTAGTAGA+GGG + chr2.2:4823073-4823092 MS.gene052076:intron 35.0%
ACCCATAATCTCCAAATGAA+CGG - chr2.2:4820899-4820918 None:intergenic 35.0%
ACCGTTCATTTGGAGATTAT+GGG + chr2.2:4820895-4820914 MS.gene052076:CDS 35.0%
ACTTGTCTAGTTGTATCCTT+TGG + chr2.2:4823018-4823037 MS.gene052076:intron 35.0%
AGAAGTGGTATCATGATCAA+GGG + chr2.2:4820980-4820999 MS.gene052076:CDS 35.0%
AGTTCCTGAGTTATGATCAA+CGG - chr2.2:4824456-4824475 None:intergenic 35.0%
ATCAATCAGATTAATCGAGC+AGG - chr2.2:4821758-4821777 None:intergenic 35.0%
ATCTCCAAATGAACGGTATT+CGG - chr2.2:4820892-4820911 None:intergenic 35.0%
CATAGATATCTTGTCCTCAA+AGG - chr2.2:4823513-4823532 None:intergenic 35.0%
CCACAGAGTAAATTCACTTA+TGG + chr2.2:4822308-4822327 MS.gene052076:CDS 35.0%
CCATAAGTGAATTTACTCTG+TGG - chr2.2:4822311-4822330 None:intergenic 35.0%
CGAATATTGAGGTTAATCCA+AGG + chr2.2:4821547-4821566 MS.gene052076:CDS 35.0%
CTACTCCTATCTTTGTAGAT+AGG - chr2.2:4823069-4823088 None:intergenic 35.0%
CTTCCCTGCTTCAATATTAA+AGG - chr2.2:4821490-4821509 None:intergenic 35.0%
GAAGTTCAAAGGATGTCAAA+GGG + chr2.2:4824345-4824364 MS.gene052076:CDS 35.0%
GAATGATCTAGGAAGTTCAA+AGG + chr2.2:4824334-4824353 MS.gene052076:CDS 35.0%
GGATGATCTTGCATTTAAGA+TGG + chr2.2:4822014-4822033 MS.gene052076:intron 35.0%
GTTCAGTTCATTGATAAGCT+TGG + chr2.2:4821093-4821112 MS.gene052076:CDS 35.0%
TAAATAGAAAACATCAGGGC+CGG - chr2.2:4823829-4823848 None:intergenic 35.0%
TACAAAGATAGGAGTAGTAG+AGG + chr2.2:4823072-4823091 MS.gene052076:intron 35.0%
TACCGTTCATTTGGAGATTA+TGG + chr2.2:4820894-4820913 MS.gene052076:CDS 35.0%
TAGGTTGTTGCAGAAGATTA+GGG + chr2.2:4820948-4820967 MS.gene052076:CDS 35.0%
TAGTCTATAGTGTGCTATAG+CGG + chr2.2:4823120-4823139 MS.gene052076:intron 35.0%
TATGCACATCCATATTTGGA+TGG + chr2.2:4822039-4822058 MS.gene052076:CDS 35.0%
TCAAAAGAAATAGTTCCACC+AGG - chr2.2:4821813-4821832 None:intergenic 35.0%
TCAGTGAACACTTCAATTCA+TGG + chr2.2:4823473-4823492 MS.gene052076:intron 35.0%
TGTAACCCCTTACAGAATAA+GGG - chr2.2:4824119-4824138 None:intergenic 35.0%
TTGGATAGTTTGACATCTAG+TGG + chr2.2:4820619-4820638 MS.gene052076:CDS 35.0%
TTGTAACCCCTTACAGAATA+AGG - chr2.2:4824120-4824139 None:intergenic 35.0%
! ATTATATGATGTCGGCTACT+TGG + chr2.2:4823415-4823434 MS.gene052076:intron 35.0%
! ATTTGCCTGTTTAGGATATC+GGG + chr2.2:4821350-4821369 MS.gene052076:intron 35.0%
! CAATTTTCTACAACCACCAA+GGG + chr2.2:4821720-4821739 MS.gene052076:intron 35.0%
! CACTTGATGGATGTTTGTAT+TGG + chr2.2:4821440-4821459 MS.gene052076:intron 35.0%
! CCGACATCATATAATGGAAA+AGG - chr2.2:4823410-4823429 None:intergenic 35.0%
! GATAACACACGTTTTGTGAA+TGG + chr2.2:4822494-4822513 MS.gene052076:CDS 35.0%
! TATGATGCTTTTACTCTTGG+TGG + chr2.2:4824093-4824112 MS.gene052076:CDS 35.0%
! TCAATTTTCTACAACCACCA+AGG + chr2.2:4821719-4821738 MS.gene052076:intron 35.0%
! TGTGCTTCAGTGGTTAATTT+TGG + chr2.2:4821009-4821028 MS.gene052076:CDS 35.0%
! TTAACATTTTCCTCCGTTGA+TGG + chr2.2:4822909-4822928 MS.gene052076:intron 35.0%
! TTTCCTTCATGTTTTCTGCT+AGG + chr2.2:4821993-4822012 MS.gene052076:intron 35.0%
!! TAATCAGAAAGCATTGTCAC+AGG - chr2.2:4823875-4823894 None:intergenic 35.0%
!!! GGTTTTAGTTACTCACTTGA+TGG + chr2.2:4821427-4821446 MS.gene052076:intron 35.0%
!!! GTTTGTTGTTGATTTTGCGA+CGG - chr2.2:4820108-4820127 None:intergenic 35.0%
!!! TTGGTCTAGGTTTTTTACTC+CGG + chr2.2:4820366-4820385 MS.gene052076:CDS 35.0%
AACAACCCGATATCCTAAAC+AGG - chr2.2:4821358-4821377 None:intergenic 40.0%
AACAGTATTTGAGTCAGGAG+AGG + chr2.2:4820824-4820843 MS.gene052076:CDS 40.0%
AACCTCACAAACAACCTCTT+TGG - chr2.2:4821046-4821065 None:intergenic 40.0%
AAGAAAGGAGTTTGAGTGCT+AGG + chr2.2:4820929-4820948 MS.gene052076:CDS 40.0%
AAGCTCTCTATGTATCACAG+GGG - chr2.2:4821145-4821164 None:intergenic 40.0%
AAGCTTGGCAATGTTGTTGA+AGG + chr2.2:4821108-4821127 MS.gene052076:CDS 40.0%
AATGAAGAATCTCAGCAGAC+TGG - chr2.2:4821920-4821939 None:intergenic 40.0%
ACAGAAGTCTATAGGCGAAT+GGG + chr2.2:4824374-4824393 MS.gene052076:CDS 40.0%
ACAGTATTTGAGTCAGGAGA+GGG + chr2.2:4820825-4820844 MS.gene052076:CDS 40.0%
ACGGTATTCGGCAAAATACA+CGG - chr2.2:4820880-4820899 None:intergenic 40.0%
ATGATTTCTATTGTTCCGGG+CGG + chr2.2:4820565-4820584 MS.gene052076:CDS 40.0%
ATGGGTCAAGGTTCATCTTA+TGG + chr2.2:4824392-4824411 MS.gene052076:CDS 40.0%
ATTCGCCTATAGACTTCTGT+AGG - chr2.2:4824374-4824393 None:intergenic 40.0%
CAAGGTTCATCTTATGGTGT+TGG + chr2.2:4824398-4824417 MS.gene052076:CDS 40.0%
CAGAAGTGGTATCATGATCA+AGG + chr2.2:4820979-4820998 MS.gene052076:CDS 40.0%
CATCCTAGCAGAAAACATGA+AGG - chr2.2:4821999-4822018 None:intergenic 40.0%
CGGAGGAAAATGTTAACCAT+AGG - chr2.2:4822905-4822924 None:intergenic 40.0%
CTAGGTTGTTGCAGAAGATT+AGG + chr2.2:4820947-4820966 MS.gene052076:CDS 40.0%
GAAGCTCTCTATGTATCACA+GGG - chr2.2:4821146-4821165 None:intergenic 40.0%
GAGTTACGGATACCTGTTAA+AGG + chr2.2:4824281-4824300 MS.gene052076:CDS 40.0%
GGAAGTTCAAAGGATGTCAA+AGG + chr2.2:4824344-4824363 MS.gene052076:CDS 40.0%
GGAGTATGCACATCCATATT+TGG + chr2.2:4822035-4822054 MS.gene052076:CDS 40.0%
GGATTCTGATATGACTGAGA+AGG + chr2.2:4820792-4820811 MS.gene052076:CDS 40.0%
GGTGAAACAGTATTTGAGTC+AGG + chr2.2:4820819-4820838 MS.gene052076:CDS 40.0%
GTTGATCATAACTCAGGAAC+TGG + chr2.2:4824455-4824474 MS.gene052076:CDS 40.0%
GTTGCAGAAGATTAGGGATA+AGG + chr2.2:4820954-4820973 MS.gene052076:CDS 40.0%
GTTGTTTGTGAGGTTGTTGA+AGG + chr2.2:4821051-4821070 MS.gene052076:CDS 40.0%
TAAACCGTGTCAGAGTTAGT+TGG - chr2.2:4823975-4823994 None:intergenic 40.0%
TACACATGCATGCCTTTAAC+AGG - chr2.2:4824296-4824315 None:intergenic 40.0%
TACAGAAGTCTATAGGCGAA+TGG + chr2.2:4824373-4824392 MS.gene052076:CDS 40.0%
TACCAAAGAGGTTGTTTGTG+AGG + chr2.2:4821041-4821060 MS.gene052076:CDS 40.0%
TATGCCGTTGATCATAACTC+AGG + chr2.2:4824449-4824468 MS.gene052076:CDS 40.0%
TCTGTAAGGGGTTACAACAT+GGG + chr2.2:4824123-4824142 MS.gene052076:CDS 40.0%
TGAATACTGGACTCAGCTTT+CGG - chr2.2:4822113-4822132 None:intergenic 40.0%
TGATATGACTGAGAAGGAGA+GGG + chr2.2:4820798-4820817 MS.gene052076:CDS 40.0%
TGGAGATTATGGGTATGATG+AGG + chr2.2:4820905-4820924 MS.gene052076:CDS 40.0%
TGGGTATGATGAGGAAAGAA+AGG + chr2.2:4820914-4820933 MS.gene052076:CDS 40.0%
TTAGGGATAAGGTTCAGAAG+TGG + chr2.2:4820965-4820984 MS.gene052076:CDS 40.0%
TTCGCCTATAGACTTCTGTA+GGG - chr2.2:4824373-4824392 None:intergenic 40.0%
TTCTGTAAGGGGTTACAACA+TGG + chr2.2:4824122-4824141 MS.gene052076:CDS 40.0%
TTTAGGCCTCTTAGTCTCTA+GGG + chr2.2:4823803-4823822 MS.gene052076:intron 40.0%
TTTGCCGAATACCGTTCATT+TGG + chr2.2:4820885-4820904 MS.gene052076:CDS 40.0%
TTTGTGAATGGAGCTGTAGT+TGG + chr2.2:4822506-4822525 MS.gene052076:CDS 40.0%
! AACAAACCCGTTTTCCTCTA+CGG + chr2.2:4820241-4820260 MS.gene052076:CDS 40.0%
! ACTGAATGGAGTATTATCCC+TGG + chr2.2:4821648-4821667 MS.gene052076:CDS 40.0%
! ATATCTATGTTTTCCAGGGC+CGG + chr2.2:4823524-4823543 MS.gene052076:intron 40.0%
! CAGAAGTACAATACCAGAGT+TGG - chr2.2:4821687-4821706 None:intergenic 40.0%
! GAAGAAGTTGCTGGTTGTTA+TGG - chr2.2:4821877-4821896 None:intergenic 40.0%
! GTTAAAGGCATGCATGTGTA+TGG + chr2.2:4824296-4824315 MS.gene052076:CDS 40.0%
! GTTTATCCAGTTGATGTCTG+TGG + chr2.2:4823990-4824009 MS.gene052076:CDS 40.0%
! TTTTAGGCCTCTTAGTCTCT+AGG + chr2.2:4823802-4823821 MS.gene052076:intron 40.0%
!! AATGGTCAAAGAGTACTACC+TGG + chr2.2:4822383-4822402 MS.gene052076:CDS 40.0%
!! ATATAGTGAGAGTACTTGGG+AGG + chr2.2:4820708-4820727 MS.gene052076:CDS 40.0%
!! GCTAGAGAAAAGTATCACTC+AGG - chr2.2:4822836-4822855 None:intergenic 40.0%
!! TGTATGGTTTTGCAGAGCAT+GGG + chr2.2:4824312-4824331 MS.gene052076:CDS 40.0%
AAGCTGAGTCCAGTATTCAC+TGG + chr2.2:4822114-4822133 MS.gene052076:CDS 45.0%
ACAAATGCCGATGGAACTGT+TGG + chr2.2:4820673-4820692 MS.gene052076:CDS 45.0%
ACATAGAGAGCTTCCCAAAG+AGG + chr2.2:4821152-4821171 MS.gene052076:CDS 45.0%
ACATGAAGAGTTCGGTTTCG+TGG - chr2.2:4822075-4822094 None:intergenic 45.0%
AGCTGAGTCCAGTATTCACT+GGG + chr2.2:4822115-4822134 MS.gene052076:CDS 45.0%
ATAGGAGTAGTAGAGGGAAC+AGG + chr2.2:4823079-4823098 MS.gene052076:intron 45.0%
ATTGGATTAACAGCTGCGTC+CGG + chr2.2:4821458-4821477 MS.gene052076:intron 45.0%
CGATGGAACTGTTGGAATCA+CGG + chr2.2:4820681-4820700 MS.gene052076:CDS 45.0%
CGTGATTCCAACAGTTCCAT+CGG - chr2.2:4820683-4820702 None:intergenic 45.0%
CTCGTTCCATCCAACAACTT+CGG + chr2.2:4820064-4820083 MS.gene052076:CDS 45.0%
CTGATATGACTGAGAAGGAG+AGG + chr2.2:4820797-4820816 MS.gene052076:CDS 45.0%
GAGATAACAACTCGTGACGA+AGG + chr2.2:4822344-4822363 MS.gene052076:CDS 45.0%
GCGATTGAAGAATGGGAACT+GGG - chr2.2:4823950-4823969 None:intergenic 45.0%
GGAACCCTACAGAAGTCTAT+AGG + chr2.2:4824366-4824385 MS.gene052076:CDS 45.0%
GGAAGCTCTCTATGTATCAC+AGG - chr2.2:4821147-4821166 None:intergenic 45.0%
GGACTGAATAGAGCTCTTAG+TGG + chr2.2:4821849-4821868 MS.gene052076:CDS 45.0%
GGTTACAACATGGGTGAACT+TGG + chr2.2:4824132-4824151 MS.gene052076:CDS 45.0%
GTAGTAGAGGGAACAGGTTA+AGG + chr2.2:4823085-4823104 MS.gene052076:intron 45.0%
GTATAAGAGGAGGATGGAGA+AGG + chr2.2:4820849-4820868 MS.gene052076:CDS 45.0%
TACGGCTGCTAAATGCTTCA+GGG + chr2.2:4823224-4823243 MS.gene052076:intron 45.0%
TGCAAACTGCAGGTAGATCA+AGG + chr2.2:4823910-4823929 MS.gene052076:intron 45.0%
TGGAGCGAGAAATATGTTCC+AGG + chr2.2:4822526-4822545 MS.gene052076:CDS 45.0%
TGGTGGCCCTTATTCTGTAA+GGG + chr2.2:4824110-4824129 MS.gene052076:CDS 45.0%
TTACGGCTGCTAAATGCTTC+AGG + chr2.2:4823223-4823242 MS.gene052076:intron 45.0%
TTGATGCATTGAGGGAGAGA+GGG - chr2.2:4820130-4820149 None:intergenic 45.0%
TTTGTTAGAGTGGACGGCAA+TGG - chr2.2:4820227-4820246 None:intergenic 45.0%
! AACTCAATCGGCTTAGTCTG+CGG - chr2.2:4820772-4820791 None:intergenic 45.0%
! GAAGCATTTAGCAGCCGTAA+TGG - chr2.2:4823223-4823242 None:intergenic 45.0%
! GAGAGCAGTTGATGCATTGA+GGG - chr2.2:4820138-4820157 None:intergenic 45.0%
! GGATGAAGTGCCACCAATAT+GGG + chr2.2:4822149-4822168 MS.gene052076:CDS 45.0%
! TATCCAGTTGATGTCTGTGG+AGG + chr2.2:4823993-4824012 MS.gene052076:CDS 45.0%
! TGAGAGCAGTTGATGCATTG+AGG - chr2.2:4820139-4820158 None:intergenic 45.0%
! TGGATGAAGTGCCACCAATA+TGG + chr2.2:4822148-4822167 MS.gene052076:CDS 45.0%
! TTGGTGGCCCTTATTCTGTA+AGG + chr2.2:4824109-4824128 MS.gene052076:CDS 45.0%
!! AACGGGTTTGTTAGAGTGGA+CGG - chr2.2:4820233-4820252 None:intergenic 45.0%
!! AGTTGGTGGCGATTGAAGAA+TGG - chr2.2:4823958-4823977 None:intergenic 45.0%
!! GGAAAACGGGTTTGTTAGAG+TGG - chr2.2:4820237-4820256 None:intergenic 45.0%
!! GTGTATGGTTTTGCAGAGCA+TGG + chr2.2:4824311-4824330 MS.gene052076:CDS 45.0%
!! GTTGGTGGCGATTGAAGAAT+GGG - chr2.2:4823957-4823976 None:intergenic 45.0%
!! TGGTACTGGCATTGATCACA+TGG + chr2.2:4822445-4822464 MS.gene052076:CDS 45.0%
!! TTTGAGCATCGGAATCTGCA+AGG + chr2.2:4821828-4821847 MS.gene052076:CDS 45.0%
AAGGCCTGATGAGACTAGTG+AGG + chr2.2:4821566-4821585 MS.gene052076:CDS 50.0%
ACCGTGTCAGAGTTAGTTGG+TGG - chr2.2:4823972-4823991 None:intergenic 50.0%
ACGGCTGCTAAATGCTTCAG+GGG + chr2.2:4823225-4823244 MS.gene052076:intron 50.0%
AGGCCTGATGAGACTAGTGA+GGG + chr2.2:4821567-4821586 MS.gene052076:CDS 50.0%
AGGGTATGCTTGTGCTTCAG+TGG + chr2.2:4820999-4821018 MS.gene052076:CDS 50.0%
AGTATTATCCCTGGACGTGG+AGG + chr2.2:4821657-4821676 MS.gene052076:CDS 50.0%
CACAGCTTGCAGCTGAGTTA+CGG + chr2.2:4824267-4824286 MS.gene052076:intron 50.0%
CAGCAACTTCTTCAACCCTC+AGG + chr2.2:4821884-4821903 MS.gene052076:CDS 50.0%
CGCAGCTATTCGCACCATTA+CGG + chr2.2:4823206-4823225 MS.gene052076:intron 50.0%
CTGAGGGTTGAAGAAGTTGC+TGG - chr2.2:4821886-4821905 None:intergenic 50.0%
CTGAGTCCAGTATTCACTGG+GGG + chr2.2:4822117-4822136 MS.gene052076:CDS 50.0%
CTGTGGCGTGAAATTCTGCT+TGG - chr2.2:4822294-4822313 None:intergenic 50.0%
CTTCCTCCACAGACATCAAC+TGG - chr2.2:4823999-4824018 None:intergenic 50.0%
GAAGGGAAGACAAATGCCGA+TGG + chr2.2:4820664-4820683 MS.gene052076:CDS 50.0%
GCAGACTAAGCCGATTGAGT+TGG + chr2.2:4820771-4820790 MS.gene052076:CDS 50.0%
GCAGAGCATGGGAATGATCT+AGG + chr2.2:4824323-4824342 MS.gene052076:CDS 50.0%
GCCACCAACTAACTCTGACA+CGG + chr2.2:4823968-4823987 MS.gene052076:CDS 50.0%
GCTGAGTCCAGTATTCACTG+GGG + chr2.2:4822116-4822135 MS.gene052076:CDS 50.0%
GGCGATTGAAGAATGGGAAC+TGG - chr2.2:4823951-4823970 None:intergenic 50.0%
GGCGCAACTACAGAAGGAAT+TGG + chr2.2:4820600-4820619 MS.gene052076:CDS 50.0%
GGTGGCCCTTATTCTGTAAG+GGG + chr2.2:4824111-4824130 MS.gene052076:CDS 50.0%
GTAGATCAAGGCCTAGGCAT+TGG + chr2.2:4823922-4823941 MS.gene052076:CDS 50.0%
GTATTATCCCTGGACGTGGA+GGG + chr2.2:4821658-4821677 MS.gene052076:CDS 50.0%
GTCTATAGGCGAATGGGTCA+AGG + chr2.2:4824380-4824399 MS.gene052076:CDS 50.0%
GTGTTGCCGTAGAGGAAAAC+GGG - chr2.2:4820250-4820269 None:intergenic 50.0%
GTTCCATCCAACAACTTCGG+CGG + chr2.2:4820067-4820086 MS.gene052076:CDS 50.0%
GTTGATGCATTGAGGGAGAG+AGG - chr2.2:4820131-4820150 None:intergenic 50.0%
TCATCAGCAATAGCTGCTGC+CGG - chr2.2:4820388-4820407 None:intergenic 50.0%
TCCAACTTGCGCTACCTTTG+AGG + chr2.2:4823496-4823515 MS.gene052076:intron 50.0%
TCCTACCTCCAGCATGTTTC+TGG - chr2.2:4824163-4824182 None:intergenic 50.0%
TCCTCAAAGGTAGCGCAAGT+TGG - chr2.2:4823500-4823519 None:intergenic 50.0%
TCTGCACTAATTCCACCACC+AGG - chr2.2:4822404-4822423 None:intergenic 50.0%
TGCTCTGACCAAACCAAGCT+TGG - chr2.2:4824426-4824445 None:intergenic 50.0%
TTGGATTAACAGCTGCGTCC+GGG + chr2.2:4821459-4821478 MS.gene052076:intron 50.0%
! AGGAGAGGGAGTATAAGAGG+AGG + chr2.2:4820839-4820858 MS.gene052076:CDS 50.0%
! AGTTCCACCAGGTTGAAGTG+AGG - chr2.2:4821802-4821821 None:intergenic 50.0%
! CAGTTGATGTCTGTGGAGGA+AGG + chr2.2:4823997-4824016 MS.gene052076:CDS 50.0%
! CGGCTGATGTCAGTACTGAA+TGG + chr2.2:4821634-4821653 MS.gene052076:CDS 50.0%
! GAGGGAGTATAAGAGGAGGA+TGG + chr2.2:4820843-4820862 MS.gene052076:CDS 50.0%
! GGTGTTGCCGTAGAGGAAAA+CGG - chr2.2:4820251-4820270 None:intergenic 50.0%
! GTCAGGAGAGGGAGTATAAG+AGG + chr2.2:4820836-4820855 MS.gene052076:CDS 50.0%
! TCACTAGTCTCATCAGGCCT+TGG - chr2.2:4821567-4821586 None:intergenic 50.0%
! TGACGGATGAGATAGTCACC+TGG - chr2.2:4822547-4822566 None:intergenic 50.0%
! TGGAGTATTATCCCTGGACG+TGG + chr2.2:4821654-4821673 MS.gene052076:CDS 50.0%
! TGGTGGTTTGGAGGAGGAAA+CGG + chr2.2:4820328-4820347 MS.gene052076:CDS 50.0%
!! ACTGGCTCAAGAGTACCTGA+GGG - chr2.2:4821902-4821921 None:intergenic 50.0%
!! CAAAGAGTACTACCTGGTGG+TGG + chr2.2:4822389-4822408 MS.gene052076:CDS 50.0%
!! CCACCAATATGGGTTGATCG+CGG + chr2.2:4822159-4822178 MS.gene052076:CDS 50.0%
!! GAGGAGGAGGATTTTGGTCT+AGG + chr2.2:4820353-4820372 MS.gene052076:CDS 50.0%
!! GGTCAAAGAGTACTACCTGG+TGG + chr2.2:4822386-4822405 MS.gene052076:CDS 50.0%
!! GGTGGTGGAATTAGTGCAGA+TGG + chr2.2:4822404-4822423 MS.gene052076:CDS 50.0%
!! TATGGTGTTGGTGCCAAGCT+TGG + chr2.2:4824410-4824429 MS.gene052076:CDS 50.0%
!! TGTTGGTGCCAAGCTTGGTT+TGG + chr2.2:4824415-4824434 MS.gene052076:CDS 50.0%
!!! GTTGTTGATTTTGCGACGGC+CGG - chr2.2:4820104-4820123 None:intergenic 50.0%
AGAGGAGGATGGAGAAGGCT+AGG + chr2.2:4820854-4820873 MS.gene052076:CDS 55.0%
AGTAATGGTGGCAGTGGTGG+TGG + chr2.2:4820301-4820320 MS.gene052076:CDS 55.0%
ATGTCTGTGGAGGAAGGAGC+TGG + chr2.2:4824003-4824022 MS.gene052076:CDS 55.0%
CCACCGCGATCAACCCATAT+TGG - chr2.2:4822165-4822184 None:intergenic 55.0%
CCGCGATCAACCCATATTGG+TGG - chr2.2:4822162-4822181 None:intergenic 55.0%
CCTGATGAGACTAGTGAGGG+AGG + chr2.2:4821570-4821589 MS.gene052076:CDS 55.0%
CGCCTACACAACCACCATAG+CGG - chr2.2:4824062-4824081 None:intergenic 55.0%
CGGCTGCTAAATGCTTCAGG+GGG + chr2.2:4823226-4823245 MS.gene052076:intron 55.0%
CGGTGAGGGGTTTGAAGACA+CGG - chr2.2:4820177-4820196 None:intergenic 55.0%
CGTAACTCAGCTGCAAGCTG+TGG - chr2.2:4824269-4824288 None:intergenic 55.0%
CTGCAGGTAGATCAAGGCCT+AGG + chr2.2:4823916-4823935 MS.gene052076:intron 55.0%
GAGGCCTAAAGCCCTTGCTT+GGG - chr2.2:4823566-4823585 None:intergenic 55.0%
GATCAATGCCAGTACCACCG+AGG - chr2.2:4822442-4822461 None:intergenic 55.0%
GCAACCCAAGCAAGGGCTTT+AGG + chr2.2:4823559-4823578 MS.gene052076:intron 55.0%
GCCAGAAACATGCTGGAGGT+AGG + chr2.2:4824159-4824178 MS.gene052076:intron 55.0%
GGAAGTAATGGTGGCAGTGG+TGG + chr2.2:4820298-4820317 MS.gene052076:CDS 55.0%
GGTGGAAGTAATGGTGGCAG+TGG + chr2.2:4820295-4820314 MS.gene052076:CDS 55.0%
GTTCAGGCCTCACTTCAACC+TGG + chr2.2:4821792-4821811 MS.gene052076:intron 55.0%
TCCGGGCGGAGTTTACACAA+GGG + chr2.2:4820579-4820598 MS.gene052076:CDS 55.0%
TGAGGCCTAAAGCCCTTGCT+TGG - chr2.2:4823567-4823586 None:intergenic 55.0%
TGAGGGGTTTGAAGACACGG+CGG - chr2.2:4820174-4820193 None:intergenic 55.0%
TGCTGCCAGAAACATGCTGG+AGG + chr2.2:4824155-4824174 MS.gene052076:CDS 55.0%
TTCCGGGCGGAGTTTACACA+AGG + chr2.2:4820578-4820597 MS.gene052076:CDS 55.0%
TTCCTCTACGGCAACACCAC+TGG + chr2.2:4820253-4820272 MS.gene052076:CDS 55.0%
TTCGGCGGCACCATCTTATC+CGG + chr2.2:4820082-4820101 MS.gene052076:CDS 55.0%
TTGGATACCCTCCACGTCCA+GGG - chr2.2:4821668-4821687 None:intergenic 55.0%
TTTGCGACGGCCGGATAAGA+TGG - chr2.2:4820095-4820114 None:intergenic 55.0%
TTTGGAGGAGGAAACGGAGG+AGG + chr2.2:4820334-4820353 MS.gene052076:CDS 55.0%
! AAGCCCTTGCTTGGGTTGCT+TGG - chr2.2:4823558-4823577 None:intergenic 55.0%
! ACGGAGGAGGAGGAGGATTT+TGG + chr2.2:4820347-4820366 MS.gene052076:CDS 55.0%
! CACAAGGGCGCAACTACAGA+AGG + chr2.2:4820594-4820613 MS.gene052076:CDS 55.0%
! CCTCCCTCACTAGTCTCATC+AGG - chr2.2:4821573-4821592 None:intergenic 55.0%
! TGGTTTGGAGGAGGAAACGG+AGG + chr2.2:4820331-4820350 MS.gene052076:CDS 55.0%
!! AACACCACTGGTGGTGGACA+TGG + chr2.2:4820265-4820284 MS.gene052076:CDS 55.0%
!! ACGTGGAGGGTATCCAACTC+TGG + chr2.2:4821671-4821690 MS.gene052076:CDS 55.0%
!! CCAATATGGGTTGATCGCGG+TGG + chr2.2:4822162-4822181 MS.gene052076:CDS 55.0%
!! GACTGGCTCAAGAGTACCTG+AGG - chr2.2:4821903-4821922 None:intergenic 55.0%
!! GGTGGTGGTGGAAGTAATGG+TGG + chr2.2:4820289-4820308 MS.gene052076:CDS 55.0%
!! GGTGGTGGTGGTGGAAGTAA+TGG + chr2.2:4820286-4820305 MS.gene052076:CDS 55.0%
!! TGGTGCTGCCAGAAACATGC+TGG + chr2.2:4824152-4824171 MS.gene052076:CDS 55.0%
AATGCCAGTACCACCGAGGC+TGG - chr2.2:4822438-4822457 None:intergenic 60.0%
AATGGCAGCGGCGGAGGAAA+CGG - chr2.2:4820209-4820228 None:intergenic 60.0%
ACCACCATGTCCACCACCAG+TGG - chr2.2:4820272-4820291 None:intergenic 60.0%
AGAGTGGACGGCAATGGCAG+CGG - chr2.2:4820221-4820240 None:intergenic 60.0%
AGGGCCAAGCAACCCAAGCA+AGG + chr2.2:4823551-4823570 MS.gene052076:intron 60.0%
CAGGCCTCACTTCAACCTGG+TGG + chr2.2:4821795-4821814 MS.gene052076:intron 60.0%
CTCTACGGCAACACCACTGG+TGG + chr2.2:4820256-4820275 MS.gene052076:CDS 60.0%
GATGGACCTCCTACCAGCCT+CGG + chr2.2:4822422-4822441 MS.gene052076:CDS 60.0%
GCCCTTGTGTAAACTCCGCC+CGG - chr2.2:4820583-4820602 None:intergenic 60.0%
GGAACTGGGTGCCAATGCCT+AGG - chr2.2:4823936-4823955 None:intergenic 60.0%
GGCCGCTATGGTGGTTGTGT+AGG + chr2.2:4824057-4824076 MS.gene052076:CDS 60.0%
GGGCCAAGCAACCCAAGCAA+GGG + chr2.2:4823552-4823571 MS.gene052076:intron 60.0%
GTGCCGCCGAAGTTGTTGGA+TGG - chr2.2:4820073-4820092 None:intergenic 60.0%
GTTGGATACCCTCCACGTCC+AGG - chr2.2:4821669-4821688 None:intergenic 60.0%
GTTTGAAGACACGGCGGCGA+CGG - chr2.2:4820168-4820187 None:intergenic 60.0%
TACGGCAACACCACTGGTGG+TGG + chr2.2:4820259-4820278 MS.gene052076:CDS 60.0%
TGGTGGCACTTCATCCAGCC+CGG - chr2.2:4822145-4822164 None:intergenic 60.0%
TTTGAAGACACGGCGGCGAC+GGG - chr2.2:4820167-4820186 None:intergenic 60.0%
! GCGGCGTGTAGAGTGTTCAG+TGG + chr2.2:4823139-4823158 MS.gene052076:intron 60.0%
! GCTTGGGTTGCTTGGCCCTT+AGG - chr2.2:4823550-4823569 None:intergenic 60.0%
! GTTTTCCAGGGCCGGCCTAA+GGG + chr2.2:4823532-4823551 MS.gene052076:intron 60.0%
! TGTTTTCCAGGGCCGGCCTA+AGG + chr2.2:4823531-4823550 MS.gene052076:intron 60.0%
!! AATGGTGGCAGTGGTGGTGG+TGG + chr2.2:4820304-4820323 MS.gene052076:CDS 60.0%
!! ACCACTGGTGGTGGACATGG+TGG + chr2.2:4820268-4820287 MS.gene052076:CDS 60.0%
!! ACTGGTGGTGGACATGGTGG+TGG + chr2.2:4820271-4820290 MS.gene052076:CDS 60.0%
!! CACCAGTGGTGTTGCCGTAG+AGG - chr2.2:4820258-4820277 None:intergenic 60.0%
!! GATGGTGCCGCCGAAGTTGT+TGG - chr2.2:4820077-4820096 None:intergenic 60.0%
!! GGCCTCTTAGTCTCTAGGGC+CGG + chr2.2:4823807-4823826 MS.gene052076:intron 60.0%
!! GGTGGTGGTGGTTGGTGGTT+TGG + chr2.2:4820316-4820335 MS.gene052076:CDS 60.0%
!! GGTGGTGGTTGGTGGTTTGG+AGG + chr2.2:4820319-4820338 MS.gene052076:CDS 60.0%
!! GGTGGTTGGTGGTTTGGAGG+AGG + chr2.2:4820322-4820341 MS.gene052076:CDS 60.0%
AGGACAAGAACTGGCGGGGG+TGG - chr2.2:4824033-4824052 None:intergenic 65.0%
CAGTATTCACTGGGGGCCCC+GGG + chr2.2:4822124-4822143 MS.gene052076:CDS 65.0%
CCAGTACCACCGAGGCTGGT+AGG - chr2.2:4822434-4822453 None:intergenic 65.0%
CCAGTATTCACTGGGGGCCC+CGG + chr2.2:4822123-4822142 MS.gene052076:CDS 65.0%
CCTACCAGCCTCGGTGGTAC+TGG + chr2.2:4822431-4822450 MS.gene052076:CDS 65.0%
GGAGGAAACGGAGGAGGAGG+AGG + chr2.2:4820340-4820359 MS.gene052076:CDS 65.0%
GGAGGAGGAAACGGAGGAGG+AGG + chr2.2:4820337-4820356 MS.gene052076:CDS 65.0%
GGCCGGCCCTAGAGACTAAG+AGG - chr2.2:4823812-4823831 None:intergenic 65.0%
GGGTTGCTTGGCCCTTAGGC+CGG - chr2.2:4823546-4823565 None:intergenic 65.0%
GGTGGCACTTCATCCAGCCC+GGG - chr2.2:4822144-4822163 None:intergenic 65.0%
GTACCACCGAGGCTGGTAGG+AGG - chr2.2:4822431-4822450 None:intergenic 65.0%
GTGGCACTTCATCCAGCCCG+GGG - chr2.2:4822143-4822162 None:intergenic 65.0%
!! GCAGTGGTGGTGGTGGTTGG+TGG + chr2.2:4820311-4820330 MS.gene052076:CDS 65.0%
!! GGTGGACATGGTGGTGGTGG+TGG + chr2.2:4820277-4820296 MS.gene052076:CDS 65.0%
!! GGTGGTGGACATGGTGGTGG+TGG + chr2.2:4820274-4820293 MS.gene052076:CDS 65.0%
!! GTGGCAGTGGTGGTGGTGGT+TGG + chr2.2:4820308-4820327 MS.gene052076:CDS 65.0%
AAGACACGGCGGCGACGGGA+AGG - chr2.2:4820163-4820182 None:intergenic 70.0%
AGCGGCGGAGGAAACGGCGA+CGG - chr2.2:4820203-4820222 None:intergenic 70.0%
CCGGGGCCCCCAGTGAATAC+TGG - chr2.2:4822126-4822145 None:intergenic 70.0%
GGACCTCCTACCAGCCTCGG+TGG + chr2.2:4822425-4822444 MS.gene052076:CDS 70.0%
GGAGGAAACGGCGACGGTGG+CGG - chr2.2:4820197-4820216 None:intergenic 70.0%
GTGGACGGCAATGGCAGCGG+CGG - chr2.2:4820218-4820237 None:intergenic 70.0%
! AAACGGCGACGGTGGCGGTG+AGG - chr2.2:4820192-4820211 None:intergenic 70.0%
! AACGGCGACGGTGGCGGTGA+GGG - chr2.2:4820191-4820210 None:intergenic 70.0%
ATTCACTGGGGGCCCCGGGC+TGG + chr2.2:4822128-4822147 MS.gene052076:CDS 75.0%
CTTGGCCCTTAGGCCGGCCC+TGG - chr2.2:4823540-4823559 None:intergenic 75.0%
GACGGCAATGGCAGCGGCGG+AGG - chr2.2:4820215-4820234 None:intergenic 75.0%
GGCGGAGGAAACGGCGACGG+TGG - chr2.2:4820200-4820219 None:intergenic 75.0%
! ACGGCGACGGTGGCGGTGAG+GGG - chr2.2:4820190-4820209 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 4820055 4824511 4820055 ID=MS.gene052076
chr2.2 mRNA 4820055 4824511 4820055 ID=MS.gene052076.t1;Parent=MS.gene052076
chr2.2 exon 4820055 4821173 4820055 ID=MS.gene052076.t1.exon1;Parent=MS.gene052076.t1
chr2.2 CDS 4820055 4821173 4820055 ID=cds.MS.gene052076.t1;Parent=MS.gene052076.t1
chr2.2 exon 4821471 4821692 4821471 ID=MS.gene052076.t1.exon2;Parent=MS.gene052076.t1
chr2.2 CDS 4821471 4821692 4821471 ID=cds.MS.gene052076.t1;Parent=MS.gene052076.t1
chr2.2 exon 4821798 4821905 4821798 ID=MS.gene052076.t1.exon3;Parent=MS.gene052076.t1
chr2.2 CDS 4821798 4821905 4821798 ID=cds.MS.gene052076.t1;Parent=MS.gene052076.t1
chr2.2 exon 4822015 4822206 4822015 ID=MS.gene052076.t1.exon4;Parent=MS.gene052076.t1
chr2.2 CDS 4822015 4822206 4822015 ID=cds.MS.gene052076.t1;Parent=MS.gene052076.t1
chr2.2 exon 4822299 4822547 4822299 ID=MS.gene052076.t1.exon5;Parent=MS.gene052076.t1
chr2.2 CDS 4822299 4822547 4822299 ID=cds.MS.gene052076.t1;Parent=MS.gene052076.t1
chr2.2 exon 4823922 4824176 4823922 ID=MS.gene052076.t1.exon6;Parent=MS.gene052076.t1
chr2.2 CDS 4823922 4824176 4823922 ID=cds.MS.gene052076.t1;Parent=MS.gene052076.t1
chr2.2 exon 4824272 4824511 4824272 ID=MS.gene052076.t1.exon7;Parent=MS.gene052076.t1
chr2.2 CDS 4824272 4824511 4824272 ID=cds.MS.gene052076.t1;Parent=MS.gene052076.t1
Gene Sequence

>MS.gene052076

ATGTCTTCTCTCGTTCCATCCAACAACTTCGGCGGCACCATCTTATCCGGCCGTCGCAAAATCAACAACAAACCCTCTCTCCCTCAATGCATCAACTGCTCTCAACCTTCCCGTCGCCGCCGTGTCTTCAAACCCCTCACCGCCACCGTCGCCGTTTCCTCCGCCGCTGCCATTGCCGTCCACTCTAACAAACCCGTTTTCCTCTACGGCAACACCACTGGTGGTGGACATGGTGGTGGTGGTGGAAGTAATGGTGGCAGTGGTGGTGGTGGTTGGTGGTTTGGAGGAGGAAACGGAGGAGGAGGAGGATTTTGGTCTAGGTTTTTTACTCCGGCAGCAGCTATTGCTGATGAAACTAAATCTGAAGAATTTGATTCTCATGGTATGCCTGTCAATATAACTATTCAATTGAACAAACTCAGTGGTTTTAAGAAATACAAGATTTCTGAGATTACGTTTTTCGATAAGAAGCGAAAAACAAAAGTTGGTTCTGATGATTCTTTTAGTGAAATGATTTCTATTGTTCCGGGCGGAGTTTACACAAGGGCGCAACTACAGAAGGAATTGGATAGTTTGACATCTAGTGGAATGTTTGAAAAGGTTGATCTTGAAGGGAAGACAAATGCCGATGGAACTGTTGGAATCACGGTTTCATATAGTGAGAGTACTTGGGAGGCTGCTGAGAAGTTTCGTTGTATTAATGTTGGTATGATGCCGCAGACTAAGCCGATTGAGTTGGATTCTGATATGACTGAGAAGGAGAGGGTGAAACAGTATTTGAGTCAGGAGAGGGAGTATAAGAGGAGGATGGAGAAGGCTAGGCCGTGTATTTTGCCGAATACCGTTCATTTGGAGATTATGGGTATGATGAGGAAAGAAAGGAGTTTGAGTGCTAGGTTGTTGCAGAAGATTAGGGATAAGGTTCAGAAGTGGTATCATGATCAAGGGTATGCTTGTGCTTCAGTGGTTAATTTTGGAAATCTTAATACCAAAGAGGTTGTTTGTGAGGTTGTTGAAGGTGATATCAGTCAATTGCAAGTTCAGTTCATTGATAAGCTTGGCAATGTTGTTGAAGGCAATACTCAAGCCCCTGTGATACATAGAGAGCTTCCCAAAGAGGTATAATATAATATTATACACTTTGTAGTTATGTAATATGTTATGTTGTTATCTGTTATATATATGGGAGGTTCATAGGCTTCTTATTGTTGTCAATTTAGAGGGTTGTCGCTTTTTGTTATCTGCTGAATAATTGATATTTCTAGTATGGTTAGTTGCTGCCAATTTCAATGATTATTTGCCTGTTTAGGATATCGGGTTGTTTTGTTATTATGTTTTGTGATTTGTTTTTTATATCCTAAAACTGCTCATTGGTTTTAGTTACTCACTTGATGGATGTTTGTATTGGATTAACAGCTGCGTCCGGGTAACACCTTTAATATTGAAGCAGGGAAGCAAGCTTTAAGAAACATAAATTCTCTTTCTTTGTTTTCGAATATTGAGGTTAATCCAAGGCCTGATGAGACTAGTGAGGGAGGCATAATTGTTGAAATTAAGGTAAAAGAGATGGATCAGAAGACGGCTGATGTCAGTACTGAATGGAGTATTATCCCTGGACGTGGAGGGTATCCAACTCTGGTATTGTACTTCTGTCAAATTAAACATCAATTTTCTACAACCACCAAGGGATTTTTTTTTTTCCTGCTCGATTAATCTGATTGATTGCTTTTCAATTTTGTTCAGGCCTCACTTCAACCTGGTGGAACTATTTCTTTTGAGCATCGGAATCTGCAAGGACTGAATAGAGCTCTTAGTGGTTCCATAACAACCAGCAACTTCTTCAACCCTCAGGTACTCTTGAGCCAGTCTGCTGAGATTCTTCATTTTATTCTGAAAATAGTTTTTTGTTTTATCAATATTGATACTGGTATCACAAAATTTCCTTCATGTTTTCTGCTAGGATGATCTTGCATTTAAGATGGAGTATGCACATCCATATTTGGATGGTGTAGATAATCCACGAAACCGAACTCTTCATGTAAGCTGTTTCAATAGCCGAAAGCTGAGTCCAGTATTCACTGGGGGCCCCGGGCTGGATGAAGTGCCACCAATATGGGTTGATCGCGGTGGTGTCAAAGCTAATATTACAGAGGCAAGTTACTTGTTTTTCTTTATTTTTACATGAACTATTTAGGCTAATGGTAGTGATTTTTTATCTTCATATTCATGTTGTGTGCCAAGCAGAATTTCACGCCACAGAGTAAATTCACTTATGGACTTGTAATGGAAGAGATAACAACTCGTGACGAAGGTAATCAAATTTGTGCAAATGGTCAAAGAGTACTACCTGGTGGTGGAATTAGTGCAGATGGACCTCCTACCAGCCTCGGTGGTACTGGCATTGATCACATGGCATTTTTACAAGCGAATATCATTCGTGATAACACACGTTTTGTGAATGGAGCTGTAGTTGGAGCGAGAAATATGTTCCAGGTGACTATCTCATCCGTCACTAACTGTCTTTAAAGTTGCATACATGGATGCTTTAAGCCTTTTTATTATTTGCTTACATGGATGCTTTAAGCCTTTTTATTATCTTTAAGCCTTTTTCCTCTTATAATTGTATTGGTAAACCTATCTTGTTTTATGTGACTACTCATCATAAAATTCTCATCTTTGTGATACTGAAATTACTTGTTTGTTAATTCTTTGCTGCCAATATTCAGTCTTATATATCCTTGTATATTTTCTAATTGTGTGCTAAATTTTTCCTTTTAACCTGAGTGATACTTTTCTCTAGCTGATTATGCCCTAAATGTTCTTTCATTTCAATCATCCTATTTAGATCCTATGGTTAACATTTTCCTCCGTTGATGGACTATTTTTTTCTTGATTGTTGACTATGTATAATATTAAATTTTTTAACTGTAATATTCTTTTGTGTTAGCTGAGCTCTCAAGAAAACTTGTCTAGTTGTATCCTTTGGATCAATATAAAAGTTGGCATGTAAACCTATCTACAAAGATAGGAGTAGTAGAGGGAACAGGTTAAGGATATAATCTATGTAGTCTATAGTGTGCTATAGCGGCGTGTAGAGTGTTCAGTGGCTTCTATAGAAAGTAGCAGAGCCTTTTGCTGTAATGATCAAAATCGCAGCTATTCGCACCATTACGGCTGCTAAATGCTTCAGGGGGATTTTTTTGCTTTTCTTGAATTTTAATATTTAGTTACTGTAAGCTTTAGACAATTAGTTTTTATTTTTTATTTTTACTTTTTTGTATTTTCTTCTATCTTTGATTTCAGACCTATTACTTTTGTTAGAATTTATGAATATTTCATGAATTTTATGTATCCTTTTCCATTATATGATGTCGGCTACTTGGATAAATCAATGCCATTGAGCTCTAACTACACATTTTCAGTGAACACTTCAATTCATGGTCCAACTTGCGCTACCTTTGAGGACAAGATATCTATGTTTTCCAGGGCCGGCCTAAGGGCCAAGCAACCCAAGCAAGGGCTTTAGGCCTCAAAATTATGTGTGAAAAAAAGGCCTCTAAAAAATTAATTTGGTTATAAGTATATTATGTGATAGATAAATTACAGACATTTGCATAACATAATTGATTACTAAAAAGGCTTCAATTACTCTTGGTCATGAATTCAAATTTTGATCTCCACAAAATTGATTTTATATAAATATTTTGTTTAAAAAATATATTTTTAAAGGCCACATTAAAAAATTTGTTTTAGGCCTCTTAGTCTCTAGGGCCGGCCCTGATGTTTTCTATTTAAGACTCTTGAAGTATGCGATAGACCTGTGACAATGCTTTCTGATTATACAGTTTTTATATATGCAAACTGCAGGTAGATCAAGGCCTAGGCATTGGCACCCAGTTCCCATTCTTCAATCGCCACCAACTAACTCTGACACGGTTTATCCAGTTGATGTCTGTGGAGGAAGGAGCTGGTAAACCACCCCCGCCAGTTCTTGTCCTCCATGGCCGCTATGGTGGTTGTGTAGGCGATCTTCCAAGTTATGATGCTTTTACTCTTGGTGGCCCTTATTCTGTAAGGGGTTACAACATGGGTGAACTTGGTGCTGCCAGAAACATGCTGGAGGTAGGAATTACTAGCCTCGTTTTATGATTCTTTATCAAGATTTTATTGTAGTTAACTTTTATTATCTGTTTACTAATTTCTTTTTCATTCCACAGCTTGCAGCTGAGTTACGGATACCTGTTAAAGGCATGCATGTGTATGGTTTTGCAGAGCATGGGAATGATCTAGGAAGTTCAAAGGATGTCAAAGGGAACCCTACAGAAGTCTATAGGCGAATGGGTCAAGGTTCATCTTATGGTGTTGGTGCCAAGCTTGGTTTGGTCAGAGCAGAATATGCCGTTGATCATAACTCAGGAACTGGTGCATTATATTTACGTTTTGGAGAGAGGTTTTAA
Protein sequence

>MS.gene052076.t1

MSSLVPSNNFGGTILSGRRKINNKPSLPQCINCSQPSRRRRVFKPLTATVAVSSAAAIAVHSNKPVFLYGNTTGGGHGGGGGSNGGSGGGGWWFGGGNGGGGGFWSRFFTPAAAIADETKSEEFDSHGMPVNITIQLNKLSGFKKYKISEITFFDKKRKTKVGSDDSFSEMISIVPGGVYTRAQLQKELDSLTSSGMFEKVDLEGKTNADGTVGITVSYSESTWEAAEKFRCINVGMMPQTKPIELDSDMTEKERVKQYLSQEREYKRRMEKARPCILPNTVHLEIMGMMRKERSLSARLLQKIRDKVQKWYHDQGYACASVVNFGNLNTKEVVCEVVEGDISQLQVQFIDKLGNVVEGNTQAPVIHRELPKELRPGNTFNIEAGKQALRNINSLSLFSNIEVNPRPDETSEGGIIVEIKVKEMDQKTADVSTEWSIIPGRGGYPTLASLQPGGTISFEHRNLQGLNRALSGSITTSNFFNPQDDLAFKMEYAHPYLDGVDNPRNRTLHVSCFNSRKLSPVFTGGPGLDEVPPIWVDRGGVKANITENFTPQSKFTYGLVMEEITTRDEGNQICANGQRVLPGGGISADGPPTSLGGTGIDHMAFLQANIIRDNTRFVNGAVVGARNMFQVDQGLGIGTQFPFFNRHQLTLTRFIQLMSVEEGAGKPPPPVLVLHGRYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNMLELAAELRIPVKGMHVYGFAEHGNDLGSSKDVKGNPTEVYRRMGQGSSYGVGAKLGLVRAEYAVDHNSGTGALYLRFGERF