Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59601.t1 | XP_024629000.1 | 82.5 | 274 | 20 | 1 | 1 | 246 | 1 | 274 | 2.80E-121 | 444.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59601.t1 | P42814 | 70.8 | 178 | 47 | 1 | 55 | 232 | 72 | 244 | 1.2e-77 | 291.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59601.t1 | A0A396GGN2 | 82.5 | 274 | 20 | 1 | 1 | 246 | 1 | 274 | 2.0e-121 | 444.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056776 | MS.gene59601 | -0.801282 | 9.69E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59601.t1 | MTR_8g028080 | 80.070 | 286 | 17 | 1 | 1 | 246 | 1 | 286 | 3.12e-143 | 404 |
| MS.gene59601.t1 | MTR_5g040960 | 38.983 | 177 | 75 | 5 | 41 | 191 | 26 | 195 | 7.50e-30 | 112 |
| MS.gene59601.t1 | MTR_5g040940 | 39.521 | 167 | 69 | 5 | 41 | 182 | 26 | 185 | 2.81e-29 | 111 |
| MS.gene59601.t1 | MTR_5g041010 | 38.286 | 175 | 76 | 7 | 42 | 191 | 26 | 193 | 2.10e-27 | 106 |
| MS.gene59601.t1 | MTR_5g041040 | 36.932 | 176 | 79 | 5 | 41 | 191 | 26 | 194 | 2.42e-23 | 95.5 |
| MS.gene59601.t1 | MTR_5g041080 | 35.119 | 168 | 77 | 5 | 41 | 183 | 27 | 187 | 1.04e-20 | 88.6 |
| MS.gene59601.t1 | MTR_2g021750 | 32.624 | 141 | 82 | 4 | 55 | 193 | 191 | 320 | 9.19e-18 | 82.4 |
| MS.gene59601.t1 | MTR_5g086410 | 29.379 | 177 | 95 | 3 | 44 | 196 | 21 | 191 | 1.56e-17 | 79.7 |
| MS.gene59601.t1 | MTR_2g021830 | 32.000 | 150 | 84 | 5 | 45 | 193 | 34 | 166 | 8.54e-17 | 77.0 |
| MS.gene59601.t1 | MTR_6g071425 | 30.481 | 187 | 96 | 8 | 43 | 200 | 78 | 259 | 4.36e-16 | 76.6 |
| MS.gene59601.t1 | MTR_2g021910 | 30.114 | 176 | 88 | 5 | 40 | 193 | 242 | 404 | 5.44e-16 | 78.2 |
| MS.gene59601.t1 | MTR_2g021910 | 31.250 | 176 | 86 | 5 | 40 | 193 | 539 | 701 | 1.24e-15 | 77.0 |
| MS.gene59601.t1 | MTR_5g041095 | 33.721 | 172 | 81 | 6 | 41 | 186 | 26 | 190 | 1.37e-15 | 74.3 |
| MS.gene59601.t1 | MTR_0129s0080 | 27.354 | 223 | 105 | 8 | 7 | 196 | 5 | 203 | 3.52e-15 | 73.6 |
| MS.gene59601.t1 | MTR_6g090200 | 24.862 | 181 | 106 | 4 | 43 | 202 | 22 | 193 | 1.04e-13 | 68.9 |
| MS.gene59601.t1 | MTR_3g030640 | 30.128 | 156 | 94 | 6 | 55 | 202 | 106 | 254 | 1.31e-12 | 66.6 |
| MS.gene59601.t1 | MTR_3g030660 | 29.487 | 156 | 95 | 6 | 55 | 202 | 111 | 259 | 2.73e-12 | 65.9 |
| MS.gene59601.t1 | MTR_4g057825 | 29.891 | 184 | 92 | 8 | 43 | 203 | 21 | 190 | 4.01e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59601.t1 | AT2G39780 | 58.238 | 261 | 63 | 5 | 1 | 232 | 1 | 244 | 6.16e-102 | 298 |
| MS.gene59601.t1 | AT2G39780 | 47.893 | 261 | 58 | 6 | 1 | 232 | 1 | 212 | 9.12e-72 | 220 |
| MS.gene59601.t1 | AT1G14220 | 36.158 | 177 | 81 | 5 | 40 | 191 | 25 | 194 | 2.16e-27 | 106 |
| MS.gene59601.t1 | AT2G02990 | 35.714 | 168 | 76 | 5 | 41 | 183 | 28 | 188 | 1.66e-25 | 101 |
| MS.gene59601.t1 | AT1G26820 | 34.659 | 176 | 83 | 7 | 41 | 191 | 20 | 188 | 2.45e-23 | 95.5 |
| MS.gene59601.t1 | AT1G14210 | 32.796 | 186 | 109 | 8 | 55 | 231 | 62 | 240 | 2.90e-19 | 85.1 |
Find 71 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACCAATTGATACAGTTTC+TGG | 0.169899 | 8.1:-73721684 | None:intergenic |
| TCGGGAAATTGTACCTCTTT+TGG | 0.240852 | 8.1:-73719225 | None:intergenic |
| ATGAGGCTTTAGAGAAATAT+TGG | 0.301272 | 8.1:+73719880 | MS.gene59601:CDS |
| CAGCCACGTGATTGTGCTAT+TGG | 0.341618 | 8.1:+73721600 | MS.gene59601:intron |
| CTTGCTGCCTGTGGCTCAAA+TGG | 0.350915 | 8.1:+73722258 | MS.gene59601:CDS |
| CTTGCTGCCTGTGGCTCAAA+TGG | 0.350915 | 8.1:+73722365 | MS.gene59601:CDS |
| CCTCAAATAGTTTGCTCAAA+AGG | 0.356745 | 8.1:+73721320 | MS.gene59601:CDS |
| CTGGAGCGTGGTGGTGGAGG+AGG | 0.363944 | 8.1:+73717316 | MS.gene59601:CDS |
| AAACTATTTGAGGAGATATA+TGG | 0.390512 | 8.1:-73721310 | None:intergenic |
| ACTTCGTCTATGCTTCTATA+AGG | 0.402619 | 8.1:+73721355 | MS.gene59601:CDS |
| ACCACCACGCTCCAGCTCTT+CGG | 0.415495 | 8.1:-73717308 | None:intergenic |
| AGAGTTTGATTATTTCGCTT+TGG | 0.420495 | 8.1:+73717351 | MS.gene59601:CDS |
| GAGCGTGGTGGTGGAGGAGG+AGG | 0.421715 | 8.1:+73717319 | MS.gene59601:CDS |
| GTGGTGGAAAGAGTACATTT+TGG | 0.430204 | 8.1:+73719937 | MS.gene59601:CDS |
| AATAAACATTCAGCGTTGTC+AGG | 0.433405 | 8.1:-73720439 | None:intergenic |
| GAAGAGCTGGAGCGTGGTGG+TGG | 0.438213 | 8.1:+73717310 | MS.gene59601:CDS |
| AAAACGAGATTTAGTGCAAC+AGG | 0.441802 | 8.1:-73719199 | None:intergenic |
| ATGCTTCTATAAGGACTTCA+AGG | 0.444879 | 8.1:+73721364 | MS.gene59601:CDS |
| GGCACGTGCCTCCGAAGAGC+TGG | 0.446918 | 8.1:+73717297 | MS.gene59601:CDS |
| TTGCCAGAAACTGTATCAAT+TGG | 0.447398 | 8.1:+73721681 | MS.gene59601:CDS |
| TCTGGCAAGCTAACATACTT+AGG | 0.450834 | 8.1:-73721666 | None:intergenic |
| GAGCTGGAGCGTGGTGGTGG+AGG | 0.452225 | 8.1:+73717313 | MS.gene59601:CDS |
| GCTCTCATCGTCGTCTTCGC+CGG | 0.458186 | 8.1:+73717262 | MS.gene59601:CDS |
| CAGAGCGTTCTAAATGATGC+TGG | 0.473209 | 8.1:+73721221 | MS.gene59601:intron |
| CTGACTACAATGATGGAACT+TGG | 0.493476 | 8.1:+73719172 | MS.gene59601:CDS |
| CTCTGGCCTGACTACAATGA+TGG | 0.498385 | 8.1:+73719165 | MS.gene59601:CDS |
| CAAGTTCCATCATTGTAGTC+AGG | 0.500517 | 8.1:-73719171 | None:intergenic |
| AGCTCTTCGGAGGCACGTGC+CGG | 0.503540 | 8.1:-73717295 | None:intergenic |
| AAGTGATCCATTTGAGCCAC+AGG | 0.511376 | 8.1:-73722265 | None:intergenic |
| AAGTGATCCATTTGAGCCAC+AGG | 0.511376 | 8.1:-73722372 | None:intergenic |
| GCTTTGGCGTTACAATGGCC+TGG | 0.528623 | 8.1:+73717367 | MS.gene59601:CDS |
| AGCCACAGGCAGCAAGTAGG+CGG | 0.535651 | 8.1:-73722251 | None:intergenic |
| AGCCACAGGCAGCAAGTAGG+CGG | 0.535651 | 8.1:-73722358 | None:intergenic |
| CTTCGCCGGAACAGTTTCTC+CGG | 0.547127 | 8.1:+73717276 | MS.gene59601:CDS |
| GCCACAGGCAGCAAGTAGGC+GGG | 0.548694 | 8.1:-73722250 | None:intergenic |
| GCCACAGGCAGCAAGTAGGC+GGG | 0.548694 | 8.1:-73722357 | None:intergenic |
| CTTGTATAATAGATGGACTC+TGG | 0.556753 | 8.1:+73719148 | MS.gene59601:intron |
| TTTCCACCACTGCATGATGA+TGG | 0.557801 | 8.1:-73719924 | None:intergenic |
| TCATACACTTATCAAGCATA+GGG | 0.558058 | 8.1:-73722320 | None:intergenic |
| GGCAGAGATAATGCCTCCGA+GGG | 0.560735 | 8.1:-73721273 | None:intergenic |
| ATTTCGCTTTGGCGTTACAA+TGG | 0.567142 | 8.1:+73717362 | MS.gene59601:CDS |
| ACCACGCTCCAGCTCTTCGG+AGG | 0.568672 | 8.1:-73717305 | None:intergenic |
| TTGCTCAAAAGGTGCTGTAG+AGG | 0.569332 | 8.1:+73721331 | MS.gene59601:CDS |
| AGCAAGTAGGCGGGTGTCTG+TGG | 0.577883 | 8.1:-73722348 | None:intergenic |
| GCAGATATCAACATTGAATG+AGG | 0.578880 | 8.1:+73719863 | MS.gene59601:intron |
| AGGAATAAGCATAGAAGAGG+AGG | 0.581840 | 8.1:-73717238 | None:intergenic |
| ACGTGCCGGAGAAACTGTTC+CGG | 0.588833 | 8.1:-73717281 | None:intergenic |
| CTCATACACTTATCAAGCAT+AGG | 0.589722 | 8.1:-73722321 | None:intergenic |
| ACCCGCCTACTTGCTGCCTG+TGG | 0.591258 | 8.1:+73722249 | MS.gene59601:CDS |
| ACCCGCCTACTTGCTGCCTG+TGG | 0.591258 | 8.1:+73722356 | MS.gene59601:CDS |
| GGTGAGCCACAGCTCAATGA+TGG | 0.594851 | 8.1:-73719903 | None:intergenic |
| TATATGGAAAGCATTCTCAA+TGG | 0.595129 | 8.1:-73721294 | None:intergenic |
| AACACAGAAAAGTATCCCCT+CGG | 0.602969 | 8.1:+73721257 | MS.gene59601:CDS |
| GCCTCCGAAGAGCTGGAGCG+TGG | 0.605919 | 8.1:+73717304 | MS.gene59601:CDS |
| GCGAGGAATAAGCATAGAAG+AGG | 0.608059 | 8.1:-73717241 | None:intergenic |
| TCATATTCATTATGAAACAC+AGG | 0.621690 | 8.1:-73720410 | None:intergenic |
| CGAAGACGACGATGAGAGCG+AGG | 0.634942 | 8.1:-73717258 | None:intergenic |
| GGCTCACCATCATCATGCAG+TGG | 0.639472 | 8.1:+73719918 | MS.gene59601:CDS |
| TTGAGCCACAGGCAGCAAGT+AGG | 0.641938 | 8.1:-73722254 | None:intergenic |
| TTGAGCCACAGGCAGCAAGT+AGG | 0.641938 | 8.1:-73722361 | None:intergenic |
| CGAGATTTAGTGCAACAGGA+TGG | 0.642179 | 8.1:-73719195 | None:intergenic |
| GAGTATCACGTGATAGCATG+TGG | 0.642590 | 8.1:+73722292 | MS.gene59601:CDS |
| TCACCATCATCATGCAGTGG+TGG | 0.648168 | 8.1:+73719921 | MS.gene59601:CDS |
| AGCAGACGCTAAAATTGACA+TGG | 0.650482 | 8.1:+73721623 | MS.gene59601:CDS |
| TGGCAGAGATAATGCCTCCG+AGG | 0.671298 | 8.1:-73721274 | None:intergenic |
| TATTGGCCATCATTGAGCTG+TGG | 0.677031 | 8.1:+73719897 | MS.gene59601:CDS |
| TCCGAAGAGCTGGAGCGTGG+TGG | 0.679935 | 8.1:+73717307 | MS.gene59601:CDS |
| ACAGAAAAGTATCCCCTCGG+AGG | 0.707905 | 8.1:+73721260 | MS.gene59601:CDS |
| GCTCCAATAGCACAATCACG+TGG | 0.716205 | 8.1:-73721603 | None:intergenic |
| TATCACGTGATAGCATGTGG+AGG | 0.717013 | 8.1:+73722295 | MS.gene59601:CDS |
| GCAGAGATAATGCCTCCGAG+GGG | 0.759556 | 8.1:-73721272 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAAAATAAACTTAAG+AGG | - | chr8.1:73718090-73718109 | None:intergenic | 10.0% |
| !! | ATATTAGAATATTAGAATAT+TGG | - | chr8.1:73720350-73720369 | None:intergenic | 10.0% |
| !!! | TTAGATTTGATAATAATTTA+AGG | - | chr8.1:73720006-73720025 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTGAAATTTTCA+TGG | + | chr8.1:73719574-73719593 | MS.gene59601:intron | 10.0% |
| !! | AAAACTTAGAAAAGTTTAAA+TGG | - | chr8.1:73719826-73719845 | None:intergenic | 15.0% |
| !! | ATAATTTAGATATGTTGAAA+TGG | + | chr8.1:73718570-73718589 | MS.gene59601:intron | 15.0% |
| !! | TGATAGTAGTAATTATATAA+AGG | + | chr8.1:73717659-73717678 | MS.gene59601:intron | 15.0% |
| !!! | AAAATTACTATCTCATTTTT+TGG | + | chr8.1:73717635-73717654 | MS.gene59601:intron | 15.0% |
| !!! | AAGTATTGATTTTTATTTGA+AGG | - | chr8.1:73722030-73722049 | None:intergenic | 15.0% |
| !!! | AATGAGTTTATAGAATTTTT+GGG | - | chr8.1:73717951-73717970 | None:intergenic | 15.0% |
| !!! | ATCTAACTTATTTTTTGATA+TGG | + | chr8.1:73720020-73720039 | MS.gene59601:intron | 15.0% |
| !!! | ATTTTATTTTGTCCAAAATT+TGG | - | chr8.1:73719318-73719337 | None:intergenic | 15.0% |
| !!! | TAATGAGTTTATAGAATTTT+TGG | - | chr8.1:73717952-73717971 | None:intergenic | 15.0% |
| !!! | TATACTTATGGAATTTTTTT+TGG | + | chr8.1:73718327-73718346 | MS.gene59601:intron | 15.0% |
| !! | AAAAATTCCATAAGTATAAG+TGG | - | chr8.1:73718325-73718344 | None:intergenic | 20.0% |
| !! | AAAAGAATCTAAAAACAAGA+TGG | - | chr8.1:73719014-73719033 | None:intergenic | 20.0% |
| !! | AAAGAATCTAAAAACAAGAT+GGG | - | chr8.1:73719013-73719032 | None:intergenic | 20.0% |
| !! | ATCTGTTTGTGATTAAAAAA+AGG | + | chr8.1:73717602-73717621 | MS.gene59601:intron | 20.0% |
| !! | ATTAATACCACTTATACTTA+TGG | + | chr8.1:73718315-73718334 | MS.gene59601:intron | 20.0% |
| !! | ATTCATATTGAAATGATGAA+TGG | - | chr8.1:73717460-73717479 | None:intergenic | 20.0% |
| !! | GTAAAAATCAAAATCTGTTA+TGG | + | chr8.1:73719038-73719057 | MS.gene59601:intron | 20.0% |
| !! | GTAAAATAATAATAGCTACA+TGG | - | chr8.1:73720705-73720724 | None:intergenic | 20.0% |
| !! | TGTTTAAACTCAAAATAAAC+AGG | - | chr8.1:73718610-73718629 | None:intergenic | 20.0% |
| !! | TTTAATACCACTTATACTTA+TGG | + | chr8.1:73718361-73718380 | MS.gene59601:intron | 20.0% |
| !! | TTTCTAAATTTGCATAGATT+GGG | + | chr8.1:73718172-73718191 | MS.gene59601:intron | 20.0% |
| !!! | AGAAGACAAATTTTATAAAC+TGG | - | chr8.1:73720856-73720875 | None:intergenic | 20.0% |
| !!! | AGTAGATTTTATTAGGATTT+AGG | + | chr8.1:73720947-73720966 | MS.gene59601:intron | 20.0% |
| !!! | CTTTGATAGTAGATTTTATT+AGG | + | chr8.1:73720940-73720959 | MS.gene59601:intron | 20.0% |
| !!! | GTAGATTTTATTAGGATTTA+GGG | + | chr8.1:73720948-73720967 | MS.gene59601:intron | 20.0% |
| !!! | TTTTATTTTGAAATCTTCAC+TGG | + | chr8.1:73719668-73719687 | MS.gene59601:intron | 20.0% |
| ! | AAAATCAAAATCTGTTATGG+AGG | + | chr8.1:73719041-73719060 | MS.gene59601:intron | 25.0% |
| ! | AAACTATTTGAGGAGATATA+TGG | - | chr8.1:73721313-73721332 | None:intergenic | 25.0% |
| ! | AAATAAACTTAAGAGGACTA+AGG | - | chr8.1:73718083-73718102 | None:intergenic | 25.0% |
| ! | AATAAACTTAAGAGGACTAA+GGG | - | chr8.1:73718082-73718101 | None:intergenic | 25.0% |
| ! | ACATTACAAACCATATGTAT+CGG | + | chr8.1:73719267-73719286 | MS.gene59601:intron | 25.0% |
| ! | AGACTCTTTGGTAAAAATAT+CGG | + | chr8.1:73717685-73717704 | MS.gene59601:intron | 25.0% |
| ! | AGATTTCAAGAATTGACAAT+GGG | - | chr8.1:73721864-73721883 | None:intergenic | 25.0% |
| ! | AGCAAGTTTGATATTTAATC+TGG | - | chr8.1:73720638-73720657 | None:intergenic | 25.0% |
| ! | AGTTTGATATTTAATCTGGT+AGG | - | chr8.1:73720634-73720653 | None:intergenic | 25.0% |
| ! | ATAACCTACACAAATTGTTT+AGG | - | chr8.1:73720185-73720204 | None:intergenic | 25.0% |
| ! | ATATGTGCTTGTATAATAGA+TGG | + | chr8.1:73719141-73719160 | MS.gene59601:intron | 25.0% |
| ! | ATTCAAATCATATCATGTTG+AGG | - | chr8.1:73720797-73720816 | None:intergenic | 25.0% |
| ! | CAAATATACTAGAGTAAGTA+TGG | - | chr8.1:73721565-73721584 | None:intergenic | 25.0% |
| ! | CAAATTCTACTTATGATTTG+TGG | + | chr8.1:73718653-73718672 | MS.gene59601:intron | 25.0% |
| ! | CATGGAGTAATAATCAAAAT+AGG | + | chr8.1:73720548-73720567 | MS.gene59601:intron | 25.0% |
| ! | GCTTAAAGTTAATTTCTCAA+TGG | - | chr8.1:73718931-73718950 | None:intergenic | 25.0% |
| ! | GGCAAATTTAGTGTTTAAAT+AGG | - | chr8.1:73721541-73721560 | None:intergenic | 25.0% |
| ! | GTTTCTAAATTTGCATAGAT+TGG | + | chr8.1:73718171-73718190 | MS.gene59601:intron | 25.0% |
| ! | TAACCTACACAAATTGTTTA+GGG | - | chr8.1:73720184-73720203 | None:intergenic | 25.0% |
| ! | TCATATTCATTATGAAACAC+AGG | - | chr8.1:73720413-73720432 | None:intergenic | 25.0% |
| ! | TCTATGCAAATTTAGAAACA+TGG | - | chr8.1:73718170-73718189 | None:intergenic | 25.0% |
| ! | TTCAAATCATATCATGTTGA+GGG | - | chr8.1:73720796-73720815 | None:intergenic | 25.0% |
| ! | TTTATCAAACTGCAACAAAT+TGG | - | chr8.1:73719772-73719791 | None:intergenic | 25.0% |
| !! | AAACAAACTCAAAGTTCTAA+TGG | - | chr8.1:73719744-73719763 | None:intergenic | 25.0% |
| !! | AAAGGTTTTGCAAATACAAT+TGG | - | chr8.1:73721122-73721141 | None:intergenic | 25.0% |
| !! | AACATTATCAAGTTGTTGTT+AGG | + | chr8.1:73717496-73717515 | MS.gene59601:intron | 25.0% |
| !! | AATTTTGGATTTGCGAAAAT+TGG | - | chr8.1:73722113-73722132 | None:intergenic | 25.0% |
| !! | ACAAAATTTTCTTTTGTCAC+TGG | + | chr8.1:73720264-73720283 | MS.gene59601:intron | 25.0% |
| !! | ACATATGGTTTGTAATGTAA+TGG | - | chr8.1:73719265-73719284 | None:intergenic | 25.0% |
| !! | AGAGAGAAAAAAGTACAAAT+AGG | + | chr8.1:73721988-73722007 | MS.gene59601:intron | 25.0% |
| !! | GACAAATTTTATAAACTGGA+AGG | - | chr8.1:73720852-73720871 | None:intergenic | 25.0% |
| !! | GAGAGAAAAAAGTACAAATA+GGG | + | chr8.1:73721989-73722008 | MS.gene59601:intron | 25.0% |
| !!! | AAATTTTCATGGTGTCAATT+TGG | + | chr8.1:73719585-73719604 | MS.gene59601:intron | 25.0% |
| !!! | AATTTTCATGGTGTCAATTT+GGG | + | chr8.1:73719586-73719605 | MS.gene59601:intron | 25.0% |
| !!! | ATTTTATTAGGATTTAGGGT+TGG | + | chr8.1:73720952-73720971 | MS.gene59601:intron | 25.0% |
| !!! | ATTTTATTTGCAGAAAAGCA+TGG | + | chr8.1:73720374-73720393 | MS.gene59601:intron | 25.0% |
| !!! | CATTTGTTTTTAACTGTGTT+GGG | - | chr8.1:73720744-73720763 | None:intergenic | 25.0% |
| !!! | TAGCTTATAGTTTTGCTTTT+TGG | + | chr8.1:73717747-73717766 | MS.gene59601:intron | 25.0% |
| !!! | TCATTTGTTTTTAACTGTGT+TGG | - | chr8.1:73720745-73720764 | None:intergenic | 25.0% |
| !!! | TCTAACAAATTAGCTTGTAT+TGG | + | chr8.1:73717711-73717730 | MS.gene59601:intron | 25.0% |
| !!! | TTGTTTGAGGTAAAATCTTT+TGG | + | chr8.1:73720306-73720325 | MS.gene59601:intron | 25.0% |
| !!! | TTTTTTCAATTAGGATTGCA+TGG | + | chr8.1:73717875-73717894 | MS.gene59601:intron | 25.0% |
| AACAACGAACTACTAACATT+AGG | + | chr8.1:73719432-73719451 | MS.gene59601:intron | 30.0% | |
| AAGTTGAAAACCGATACATA+TGG | - | chr8.1:73719280-73719299 | None:intergenic | 30.0% | |
| AATCTGAACAAGAAACTTGA+TGG | + | chr8.1:73721879-73721898 | MS.gene59601:intron | 30.0% | |
| AGAGTTTGATTATTTCGCTT+TGG | + | chr8.1:73717351-73717370 | MS.gene59601:CDS | 30.0% | |
| ATAACGTTACAGTAAGTTTC+TGG | + | chr8.1:73720468-73720487 | MS.gene59601:intron | 30.0% | |
| ATATACTAGAGTAAGTATGG+TGG | - | chr8.1:73721562-73721581 | None:intergenic | 30.0% | |
| CACTAAAGTCTGTTTAATCA+GGG | - | chr8.1:73721467-73721486 | None:intergenic | 30.0% | |
| CAGATTTCAAGAATTGACAA+TGG | - | chr8.1:73721865-73721884 | None:intergenic | 30.0% | |
| CCAAAAGTAGAAATACAATC+AGG | - | chr8.1:73720588-73720607 | None:intergenic | 30.0% | |
| GATTTCAAGAATTGACAATG+GGG | - | chr8.1:73721863-73721882 | None:intergenic | 30.0% | |
| GCATTCTCATATGTATACAA+AGG | - | chr8.1:73720921-73720940 | None:intergenic | 30.0% | |
| GTGAGTCTATTACAAAACAT+GGG | - | chr8.1:73721445-73721464 | None:intergenic | 30.0% | |
| GTTGTGATGCATATGTAATT+AGG | - | chr8.1:73721163-73721182 | None:intergenic | 30.0% | |
| TCATACACTTATCAAGCATA+GGG | - | chr8.1:73722216-73722235 | None:intergenic | 30.0% | |
| TCTGTCAAGATAATTGTTGT+AGG | - | chr8.1:73719116-73719135 | None:intergenic | 30.0% | |
| TGCATATGTAATTAGGCATT+TGG | - | chr8.1:73721156-73721175 | None:intergenic | 30.0% | |
| TTACCAATTGATACAGTTTC+TGG | - | chr8.1:73721687-73721706 | None:intergenic | 30.0% | |
| TTGATATGGCTTATGTTTCT+GGG | + | chr8.1:73720034-73720053 | MS.gene59601:intron | 30.0% | |
| TTTCCCTAAACAATTTGTGT+AGG | + | chr8.1:73720178-73720197 | MS.gene59601:intron | 30.0% | |
| TTTGATATGGCTTATGTTTC+TGG | + | chr8.1:73720033-73720052 | MS.gene59601:intron | 30.0% | |
| ! | ATATAAAGGTGTAGACTCTT+TGG | + | chr8.1:73717673-73717692 | MS.gene59601:intron | 30.0% |
| ! | ATGTAATGGTTTGCACATTA+TGG | - | chr8.1:73719251-73719270 | None:intergenic | 30.0% |
| ! | CATTTGGTCTTTACAATCAA+AGG | - | chr8.1:73721140-73721159 | None:intergenic | 30.0% |
| ! | CTGGTTTAACGTTTACATTT+TGG | + | chr8.1:73719687-73719706 | MS.gene59601:intron | 30.0% |
| !! | ATGAGGCTTTAGAGAAATAT+TGG | + | chr8.1:73719880-73719899 | MS.gene59601:CDS | 30.0% |
| !! | ATTTTCATGGTGTCAATTTG+GGG | + | chr8.1:73719587-73719606 | MS.gene59601:intron | 30.0% |
| !! | CCTGATTGTATTTCTACTTT+TGG | + | chr8.1:73720585-73720604 | MS.gene59601:intron | 30.0% |
| !! | TATATGGAAAGCATTCTCAA+TGG | - | chr8.1:73721297-73721316 | None:intergenic | 30.0% |
| !!! | CACATATTTTGATGTTGTGT+CGG | - | chr8.1:73718745-73718764 | None:intergenic | 30.0% |
| !!! | TATTTTCTGCGTTTTGTTTG+AGG | + | chr8.1:73720293-73720312 | MS.gene59601:intron | 30.0% |
| AAAACGAGATTTAGTGCAAC+AGG | - | chr8.1:73719202-73719221 | None:intergenic | 35.0% | |
| AACCATTAGATGCACAACAA+TGG | - | chr8.1:73717414-73717433 | None:intergenic | 35.0% | |
| AACTACTAACATTAGGACCT+GGG | + | chr8.1:73719439-73719458 | MS.gene59601:intron | 35.0% | |
| AAGAAAATGAAAGCGACTGA+AGG | - | chr8.1:73718772-73718791 | None:intergenic | 35.0% | |
| AATAAACATTCAGCGTTGTC+AGG | - | chr8.1:73720442-73720461 | None:intergenic | 35.0% | |
| ACTTCGTCTATGCTTCTATA+AGG | + | chr8.1:73721355-73721374 | MS.gene59601:CDS | 35.0% | |
| AGCTAGCTAAGTGAATTTGT+AGG | + | chr8.1:73717791-73717810 | MS.gene59601:intron | 35.0% | |
| ATGCTTCTATAAGGACTTCA+AGG | + | chr8.1:73721364-73721383 | MS.gene59601:CDS | 35.0% | |
| ATGGACTTGTGGAATGAAAT+TGG | + | chr8.1:73718380-73718399 | MS.gene59601:intron | 35.0% | |
| ATTCCTTGCTGCTCTATTAT+AGG | + | chr8.1:73721057-73721076 | MS.gene59601:intron | 35.0% | |
| CAACAGTTATACTGGCATAA+AGG | - | chr8.1:73721726-73721745 | None:intergenic | 35.0% | |
| CACAAGTCCATAAGTATAAG+TGG | - | chr8.1:73718371-73718390 | None:intergenic | 35.0% | |
| CACTTATACTTATGGACTTG+TGG | + | chr8.1:73718369-73718388 | MS.gene59601:intron | 35.0% | |
| CCACTAAAGTCTGTTTAATC+AGG | - | chr8.1:73721468-73721487 | None:intergenic | 35.0% | |
| CCTGATTAAACAGACTTTAG+TGG | + | chr8.1:73721465-73721484 | MS.gene59601:intron | 35.0% | |
| CTAGCTAAGTGAATTTGTAG+GGG | + | chr8.1:73717793-73717812 | MS.gene59601:intron | 35.0% | |
| CTCACGTATTGTGAATATTC+CGG | - | chr8.1:73718517-73718536 | None:intergenic | 35.0% | |
| CTCATACACTTATCAAGCAT+AGG | - | chr8.1:73722217-73722236 | None:intergenic | 35.0% | |
| GCAGATATCAACATTGAATG+AGG | + | chr8.1:73719863-73719882 | MS.gene59601:intron | 35.0% | |
| GCTAGCTAAGTGAATTTGTA+GGG | + | chr8.1:73717792-73717811 | MS.gene59601:intron | 35.0% | |
| GGTGAACTAAGTATAAAGCA+AGG | + | chr8.1:73722083-73722102 | MS.gene59601:intron | 35.0% | |
| GGTGAGTCTATTACAAAACA+TGG | - | chr8.1:73721446-73721465 | None:intergenic | 35.0% | |
| TCACGTATTGTGAATATTCC+GGG | - | chr8.1:73718516-73718535 | None:intergenic | 35.0% | |
| TGAAACAGCAACAGTTATAC+TGG | - | chr8.1:73721734-73721753 | None:intergenic | 35.0% | |
| TTACCTTGCTTAGTTATAGC+AGG | + | chr8.1:73719342-73719361 | MS.gene59601:intron | 35.0% | |
| TTATAAACTGGAAGGACGAT+CGG | - | chr8.1:73720844-73720863 | None:intergenic | 35.0% | |
| TTCCTTGCTGCTCTATTATA+GGG | + | chr8.1:73721058-73721077 | MS.gene59601:intron | 35.0% | |
| TTGCCAGAAACTGTATCAAT+TGG | + | chr8.1:73721681-73721700 | MS.gene59601:CDS | 35.0% | |
| TTGGTAAGCTCATTACTCTT+TGG | + | chr8.1:73721700-73721719 | MS.gene59601:intron | 35.0% | |
| ! | AATGGTTTGCACATTATGGT+CGG | - | chr8.1:73719247-73719266 | None:intergenic | 35.0% |
| ! | ATTCTCTCTGGTGTCAATTT+GGG | + | chr8.1:73719492-73719511 | MS.gene59601:intron | 35.0% |
| ! | CAAACTCAAAGTTCTAATGG+TGG | - | chr8.1:73719741-73719760 | None:intergenic | 35.0% |
| ! | CCTTTTGAGCAAACTATTTG+AGG | - | chr8.1:73721323-73721342 | None:intergenic | 35.0% |
| ! | CTTGTATAATAGATGGACTC+TGG | + | chr8.1:73719148-73719167 | MS.gene59601:intron | 35.0% |
| ! | GGATACTTTTCTGTGTTTGA+GGG | - | chr8.1:73721254-73721273 | None:intergenic | 35.0% |
| ! | GGTTTTCAACTTTTCATGCT+TGG | + | chr8.1:73719288-73719307 | MS.gene59601:intron | 35.0% |
| ! | GTTGGAGGTTATTCTGTTTT+TGG | + | chr8.1:73721088-73721107 | MS.gene59601:intron | 35.0% |
| ! | TCCTAAAAGCACAACTTTCT+AGG | - | chr8.1:73721790-73721809 | None:intergenic | 35.0% |
| ! | TCCTAGAAAGTTGTGCTTTT+AGG | + | chr8.1:73721786-73721805 | MS.gene59601:intron | 35.0% |
| ! | TGATATGGCTTATGTTTCTG+GGG | + | chr8.1:73720035-73720054 | MS.gene59601:intron | 35.0% |
| !! | AGCACAACTTTCTAGGATTT+AGG | - | chr8.1:73721783-73721802 | None:intergenic | 35.0% |
| !! | ATATGTATACAAAGGCACCA+AGG | - | chr8.1:73720913-73720932 | None:intergenic | 35.0% |
| !! | ATCTCGTTTTGATCCAAAAG+AGG | + | chr8.1:73719212-73719231 | MS.gene59601:CDS | 35.0% |
| !! | CCTCAAATAGTTTGCTCAAA+AGG | + | chr8.1:73721320-73721339 | MS.gene59601:CDS | 35.0% |
| !! | GCACAACTTTCTAGGATTTA+GGG | - | chr8.1:73721782-73721801 | None:intergenic | 35.0% |
| !! | TGGTGGAAAGAGTACATTTT+GGG | + | chr8.1:73719938-73719957 | MS.gene59601:CDS | 35.0% |
| !! | TGTTTTTAACTGTGTTGGGA+AGG | - | chr8.1:73720740-73720759 | None:intergenic | 35.0% |
| !! | TTTTCATGGTGTCAATTTGG+GGG | + | chr8.1:73719588-73719607 | MS.gene59601:intron | 35.0% |
| !!! | AGCTAAGGGTGTTGTAATTT+TGG | - | chr8.1:73722128-73722147 | None:intergenic | 35.0% |
| !!! | AGTTGTGCTTTTAGGATAGT+TGG | + | chr8.1:73721794-73721813 | MS.gene59601:intron | 35.0% |
| ACAAATGCATGCAAGCAACT+AGG | + | chr8.1:73720998-73721017 | MS.gene59601:intron | 40.0% | |
| ACAAGGTTCTCCTCATTAAG+GGG | + | chr8.1:73718867-73718886 | MS.gene59601:intron | 40.0% | |
| ACACAAGGTTCTCCTCATTA+AGG | + | chr8.1:73718865-73718884 | MS.gene59601:intron | 40.0% | |
| ACGTGGCTGCAAAAACAAAA+GGG | - | chr8.1:73721589-73721608 | None:intergenic | 40.0% | |
| AGCAGACGCTAAAATTGACA+TGG | + | chr8.1:73721623-73721642 | MS.gene59601:CDS | 40.0% | |
| AGGAATAAGCATAGAAGAGG+AGG | - | chr8.1:73717241-73717260 | None:intergenic | 40.0% | |
| ATCGTCTTATCTATTGCAGG+CGG | + | chr8.1:73721024-73721043 | MS.gene59601:intron | 40.0% | |
| ATTTCGCTTTGGCGTTACAA+TGG | + | chr8.1:73717362-73717381 | MS.gene59601:CDS | 40.0% | |
| CAAGTTCCATCATTGTAGTC+AGG | - | chr8.1:73719174-73719193 | None:intergenic | 40.0% | |
| CACAAGGTTCTCCTCATTAA+GGG | + | chr8.1:73718866-73718885 | MS.gene59601:intron | 40.0% | |
| CTTCCTGCTATAACTAAGCA+AGG | - | chr8.1:73719348-73719367 | None:intergenic | 40.0% | |
| GAACTACTAACATTAGGACC+TGG | + | chr8.1:73719438-73719457 | MS.gene59601:intron | 40.0% | |
| GATGGGAAGCAATAACAGAA+AGG | - | chr8.1:73718996-73719015 | None:intergenic | 40.0% | |
| GTTGCTTGCATGCATTTGTT+TGG | - | chr8.1:73720997-73721016 | None:intergenic | 40.0% | |
| TACCCTATAATAGAGCAGCA+AGG | - | chr8.1:73721063-73721082 | None:intergenic | 40.0% | |
| TCTCTGCTAATTAACTCGCA+TGG | + | chr8.1:73720530-73720549 | MS.gene59601:intron | 40.0% | |
| TCTGGCAAGCTAACATACTT+AGG | - | chr8.1:73721669-73721688 | None:intergenic | 40.0% | |
| TGTGAATATTCCGGGAGAAT+TGG | - | chr8.1:73718508-73718527 | None:intergenic | 40.0% | |
| TTCAAGAATTGACAATGGGG+TGG | - | chr8.1:73721860-73721879 | None:intergenic | 40.0% | |
| TTGGACAATACGACAGCAAT+AGG | - | chr8.1:73720978-73720997 | None:intergenic | 40.0% | |
| TTTATAGCCAGGACAGCTAA+GGG | - | chr8.1:73722142-73722161 | None:intergenic | 40.0% | |
| ! | AATATTCCCAGGACGCTTTT+TGG | - | chr8.1:73722177-73722196 | None:intergenic | 40.0% |
| ! | ATGAAGCACTAACACAAACG+TGG | - | chr8.1:73718837-73718856 | None:intergenic | 40.0% |
| ! | ATGATTTGTGGAGTTCTTGC+TGG | + | chr8.1:73718665-73718684 | MS.gene59601:intron | 40.0% |
| ! | ATGCTTGGACTGCCAAATTT+TGG | + | chr8.1:73719303-73719322 | MS.gene59601:intron | 40.0% |
| ! | ATGGTTTGCACATTATGGTC+GGG | - | chr8.1:73719246-73719265 | None:intergenic | 40.0% |
| ! | ATTTTCCAGACCCCTTAATG+AGG | - | chr8.1:73718880-73718899 | None:intergenic | 40.0% |
| ! | CTACATGTCAGTGTCTTGTT+CGG | + | chr8.1:73718808-73718827 | MS.gene59601:intron | 40.0% |
| ! | CTGACTACAATGATGGAACT+TGG | + | chr8.1:73719172-73719191 | MS.gene59601:CDS | 40.0% |
| ! | GATTCTCTCTGGTGTCAATT+TGG | + | chr8.1:73719491-73719510 | MS.gene59601:intron | 40.0% |
| ! | GGGATACTTTTCTGTGTTTG+AGG | - | chr8.1:73721255-73721274 | None:intergenic | 40.0% |
| ! | TCGGGAAATTGTACCTCTTT+TGG | - | chr8.1:73719228-73719247 | None:intergenic | 40.0% |
| ! | TCTCTTCTGTGTATGGACTA+TGG | + | chr8.1:73719085-73719104 | MS.gene59601:intron | 40.0% |
| ! | TGATTTGTGGAGTTCTTGCT+GGG | + | chr8.1:73718666-73718685 | MS.gene59601:intron | 40.0% |
| ! | TTTCATGGTGTCAATTTGGG+GGG | + | chr8.1:73719589-73719608 | MS.gene59601:intron | 40.0% |
| ! | TTTTATAGCCAGGACAGCTA+AGG | - | chr8.1:73722143-73722162 | None:intergenic | 40.0% |
| !! | AAACCCAGAAAGTCGTTTTG+GGG | + | chr8.1:73722062-73722081 | MS.gene59601:intron | 40.0% |
| !! | AACACAGAAAAGTATCCCCT+CGG | + | chr8.1:73721257-73721276 | MS.gene59601:CDS | 40.0% |
| !! | CAAACCCAGAAAGTCGTTTT+GGG | + | chr8.1:73722061-73722080 | MS.gene59601:intron | 40.0% |
| !! | CTATTATAGGGTACTGAGGT+TGG | + | chr8.1:73721070-73721089 | MS.gene59601:intron | 40.0% |
| !! | GGTGGAAAGAGTACATTTTG+GGG | + | chr8.1:73719939-73719958 | MS.gene59601:CDS | 40.0% |
| !! | GTGGTGGAAAGAGTACATTT+TGG | + | chr8.1:73719937-73719956 | MS.gene59601:CDS | 40.0% |
| !! | TGCTCTATTATAGGGTACTG+AGG | + | chr8.1:73721066-73721085 | MS.gene59601:intron | 40.0% |
| !!! | TTCTCTGTGGTTTTATAGCC+AGG | - | chr8.1:73722153-73722172 | None:intergenic | 40.0% |
| AAGTGATCCATTTGAGCCAC+AGG | - | chr8.1:73722268-73722287 | None:intergenic | 45.0% | |
| ATCATGTTGAGGGAGATCAC+TGG | - | chr8.1:73720786-73720805 | None:intergenic | 45.0% | |
| ATTAGTCGTCCCTTTGACCT+TGG | + | chr8.1:73720893-73720912 | MS.gene59601:intron | 45.0% | |
| CAATGTCTTACTCTTGCTGC+TGG | + | chr8.1:73720138-73720157 | MS.gene59601:intron | 45.0% | |
| CACGTGGCTGCAAAAACAAA+AGG | - | chr8.1:73721590-73721609 | None:intergenic | 45.0% | |
| CATCTAATGGTTGCTGCAGA+GGG | + | chr8.1:73717422-73717441 | MS.gene59601:intron | 45.0% | |
| CCACAGAAGACAATATTCCC+AGG | - | chr8.1:73722188-73722207 | None:intergenic | 45.0% | |
| CCTGGGAATATTGTCTTCTG+TGG | + | chr8.1:73722185-73722204 | MS.gene59601:intron | 45.0% | |
| CGAGATTTAGTGCAACAGGA+TGG | - | chr8.1:73719198-73719217 | None:intergenic | 45.0% | |
| CGCATCGTCTTATCTATTGC+AGG | + | chr8.1:73721021-73721040 | MS.gene59601:intron | 45.0% | |
| CGCCATTGTTGTGCATCTAA+TGG | + | chr8.1:73717409-73717428 | MS.gene59601:intron | 45.0% | |
| GAGTATCACGTGATAGCATG+TGG | + | chr8.1:73722292-73722311 | MS.gene59601:CDS | 45.0% | |
| GATTTGTGGAGTTCTTGCTG+GGG | + | chr8.1:73718667-73718686 | MS.gene59601:intron | 45.0% | |
| GCGAGGAATAAGCATAGAAG+AGG | - | chr8.1:73717244-73717263 | None:intergenic | 45.0% | |
| GCTTCATATCCGAGTACACA+AGG | + | chr8.1:73718850-73718869 | MS.gene59601:intron | 45.0% | |
| GTCTTAGGTTCGATTCTCTC+TGG | + | chr8.1:73719480-73719499 | MS.gene59601:intron | 45.0% | |
| TATCACGTGATAGCATGTGG+AGG | + | chr8.1:73722295-73722314 | MS.gene59601:CDS | 45.0% | |
| TATTGGCCATCATTGAGCTG+TGG | + | chr8.1:73719897-73719916 | MS.gene59601:CDS | 45.0% | |
| TCACCCCAAAACGACTTTCT+GGG | - | chr8.1:73722068-73722087 | None:intergenic | 45.0% | |
| TCGAACCTAAGACCTTGAAG+AGG | - | chr8.1:73719473-73719492 | None:intergenic | 45.0% | |
| TGAGGAGAACCTTGTGTACT+CGG | - | chr8.1:73718862-73718881 | None:intergenic | 45.0% | |
| TTCACCCCAAAACGACTTTC+TGG | - | chr8.1:73722069-73722088 | None:intergenic | 45.0% | |
| TTTCCACCACTGCATGATGA+TGG | - | chr8.1:73719927-73719946 | None:intergenic | 45.0% | |
| TTTGGTAAGCTAGCTCGTAG+AGG | + | chr8.1:73717765-73717784 | MS.gene59601:intron | 45.0% | |
| ! | CAGAGCGTTCTAAATGATGC+TGG | + | chr8.1:73721221-73721240 | MS.gene59601:intron | 45.0% |
| ! | CTTTTCAGCTCCAATTCTCC+CGG | + | chr8.1:73718495-73718514 | MS.gene59601:intron | 45.0% |
| ! | GCAAACCCAGAAAGTCGTTT+TGG | + | chr8.1:73722060-73722079 | MS.gene59601:intron | 45.0% |
| ! | GCACTGACACTTTGGGTTAA+AGG | + | chr8.1:73718693-73718712 | MS.gene59601:intron | 45.0% |
| ! | GGAGCGCTAATGCAACAAAT+TGG | - | chr8.1:73719805-73719824 | None:intergenic | 45.0% |
| ! | TCTCTGGTGTCAATTTGGGT+GGG | + | chr8.1:73719496-73719515 | MS.gene59601:intron | 45.0% |
| ! | TTCATGGTGTCAATTTGGGG+GGG | + | chr8.1:73719590-73719609 | MS.gene59601:intron | 45.0% |
| !! | ACAAAGGCACCAAGGTCAAA+GGG | - | chr8.1:73720905-73720924 | None:intergenic | 45.0% |
| !! | GTGCGTTGACAAAAAGTACC+AGG | - | chr8.1:73717388-73717407 | None:intergenic | 45.0% |
| !! | TACAAAGGCACCAAGGTCAA+AGG | - | chr8.1:73720906-73720925 | None:intergenic | 45.0% |
| !! | TTATAGGGTACTGAGGTTGG+AGG | + | chr8.1:73721073-73721092 | MS.gene59601:intron | 45.0% |
| !! | TTGCTCAAAAGGTGCTGTAG+AGG | + | chr8.1:73721331-73721350 | MS.gene59601:CDS | 45.0% |
| !!! | GAGTACATTTTGGGGTCATG+AGG | + | chr8.1:73719947-73719966 | MS.gene59601:CDS | 45.0% |
| !!! | TACATTTTGGGGTCATGAGG+TGG | + | chr8.1:73719950-73719969 | MS.gene59601:intron | 45.0% |
| !!! | AATATTTATTTTTTTCAATT+AGG | + | chr8.1:73717866-73717885 | MS.gene59601:intron | 5.0% |
| !!! | ATTTTTAAGTTTTATTTTTT+AGG | + | chr8.1:73717542-73717561 | MS.gene59601:intron | 5.0% |
| !!! | TTTTTAAGTTTTATTTTTTA+GGG | + | chr8.1:73717543-73717562 | MS.gene59601:intron | 5.0% |
| ACCTGCGTCTCTTCTGTGTA+TGG | + | chr8.1:73719078-73719097 | MS.gene59601:intron | 50.0% | |
| CAGCCACGTGATTGTGCTAT+TGG | + | chr8.1:73721600-73721619 | MS.gene59601:intron | 50.0% | |
| CGGGAGAATTGGAGCTGAAA+AGG | - | chr8.1:73718497-73718516 | None:intergenic | 50.0% | |
| CTCTGGCCTGACTACAATGA+TGG | + | chr8.1:73719165-73719184 | MS.gene59601:CDS | 50.0% | |
| GCATCTAATGGTTGCTGCAG+AGG | + | chr8.1:73717421-73717440 | MS.gene59601:intron | 50.0% | |
| GCTCCAATAGCACAATCACG+TGG | - | chr8.1:73721606-73721625 | None:intergenic | 50.0% | |
| GTGCTCCTCTTCAAGGTCTT+AGG | + | chr8.1:73719465-73719484 | MS.gene59601:intron | 50.0% | |
| GTTCTCCTCATTAAGGGGTC+TGG | + | chr8.1:73718872-73718891 | MS.gene59601:intron | 50.0% | |
| TACAACACCCTTAGCTGTCC+TGG | + | chr8.1:73722132-73722151 | MS.gene59601:intron | 50.0% | |
| TACACAGAAGAGACGCAGGT+TGG | - | chr8.1:73719078-73719097 | None:intergenic | 50.0% | |
| TCACCATCATCATGCAGTGG+TGG | + | chr8.1:73719921-73719940 | MS.gene59601:CDS | 50.0% | |
| TCCATACACAGAAGAGACGC+AGG | - | chr8.1:73719082-73719101 | None:intergenic | 50.0% | |
| ! | CTCTCTGGTGTCAATTTGGG+TGG | + | chr8.1:73719495-73719514 | MS.gene59601:intron | 50.0% |
| !! | ACAGAAAAGTATCCCCTCGG+AGG | + | chr8.1:73721260-73721279 | MS.gene59601:CDS | 50.0% |
| !! | AGAGAAGCCAAAAAGCGTCC+TGG | + | chr8.1:73722167-73722186 | MS.gene59601:intron | 50.0% |
| !! | GAGAAGCCAAAAAGCGTCCT+GGG | + | chr8.1:73722168-73722187 | MS.gene59601:intron | 50.0% |
| !! | GGGGTTAGCACTGACACTTT+GGG | + | chr8.1:73718686-73718705 | MS.gene59601:intron | 50.0% |
| !! | TGGGGTTAGCACTGACACTT+TGG | + | chr8.1:73718685-73718704 | MS.gene59601:intron | 50.0% |
| !!! | GACGCTTTTTGGCTTCTCTG+TGG | - | chr8.1:73722166-73722185 | None:intergenic | 50.0% |
| ACGTGCCGGAGAAACTGTTC+CGG | - | chr8.1:73717284-73717303 | None:intergenic | 55.0% | |
| CGGTGTCTGCGTATCTGACA+CGG | - | chr8.1:73718725-73718744 | None:intergenic | 55.0% | |
| CTTCGCCGGAACAGTTTCTC+CGG | + | chr8.1:73717276-73717295 | MS.gene59601:CDS | 55.0% | |
| CTTGCTGCCTGTGGCTCAAA+TGG | + | chr8.1:73722258-73722277 | MS.gene59601:CDS | 55.0% | |
| GCAGAGATAATGCCTCCGAG+GGG | - | chr8.1:73721275-73721294 | None:intergenic | 55.0% | |
| GCTTTGGCGTTACAATGGCC+TGG | + | chr8.1:73717367-73717386 | MS.gene59601:CDS | 55.0% | |
| GGCAGAGATAATGCCTCCGA+GGG | - | chr8.1:73721276-73721295 | None:intergenic | 55.0% | |
| GGCTCACCATCATCATGCAG+TGG | + | chr8.1:73719918-73719937 | MS.gene59601:CDS | 55.0% | |
| GGTGAGCCACAGCTCAATGA+TGG | - | chr8.1:73719906-73719925 | None:intergenic | 55.0% | |
| GGTGTCTGCGTATCTGACAC+GGG | - | chr8.1:73718724-73718743 | None:intergenic | 55.0% | |
| TGGCAGAGATAATGCCTCCG+AGG | - | chr8.1:73721277-73721296 | None:intergenic | 55.0% | |
| TGGTTGCTGCAGAGGGTAAC+AGG | + | chr8.1:73717429-73717448 | MS.gene59601:intron | 55.0% | |
| TTGAGCCACAGGCAGCAAGT+AGG | - | chr8.1:73722257-73722276 | None:intergenic | 55.0% | |
| ! | TGGGAGTGTGCTCCTCTTCA+AGG | + | chr8.1:73719458-73719477 | MS.gene59601:intron | 55.0% |
| ! | TTGAAGAGGAGCACACTCCC+AGG | - | chr8.1:73719459-73719478 | None:intergenic | 55.0% |
| !! | TGTTTCTGGGGCTACCACGT+CGG | + | chr8.1:73720047-73720066 | MS.gene59601:intron | 55.0% |
| ACCACCACGCTCCAGCTCTT+CGG | - | chr8.1:73717311-73717330 | None:intergenic | 60.0% | |
| ACGTCGGTGCACATTCGCAG+TGG | + | chr8.1:73720063-73720082 | MS.gene59601:intron | 60.0% | |
| AGCAAGTAGGCGGGTGTCTG+TGG | - | chr8.1:73722244-73722263 | None:intergenic | 60.0% | |
| AGCCACAGGCAGCAAGTAGG+CGG | - | chr8.1:73722254-73722273 | None:intergenic | 60.0% | |
| CGAAGACGACGATGAGAGCG+AGG | - | chr8.1:73717261-73717280 | None:intergenic | 60.0% | |
| CGTCGGTGCACATTCGCAGT+GGG | + | chr8.1:73720064-73720083 | MS.gene59601:intron | 60.0% | |
| GCTCTCATCGTCGTCTTCGC+CGG | + | chr8.1:73717262-73717281 | MS.gene59601:CDS | 60.0% | |
| GTCGGTGCACATTCGCAGTG+GGG | + | chr8.1:73720065-73720084 | MS.gene59601:intron | 60.0% | |
| ! | ACTGCGAATGTGCACCGACG+TGG | - | chr8.1:73720064-73720083 | None:intergenic | 60.0% |
| ACCACGCTCCAGCTCTTCGG+AGG | - | chr8.1:73717308-73717327 | None:intergenic | 65.0% | |
| GAAGAGCTGGAGCGTGGTGG+TGG | + | chr8.1:73717310-73717329 | MS.gene59601:CDS | 65.0% | |
| GCCACAGGCAGCAAGTAGGC+GGG | - | chr8.1:73722253-73722272 | None:intergenic | 65.0% | |
| TCCGAAGAGCTGGAGCGTGG+TGG | + | chr8.1:73717307-73717326 | MS.gene59601:CDS | 65.0% | |
| ! | ACCCGCCTACTTGCTGCCTG+TGG | + | chr8.1:73722249-73722268 | MS.gene59601:CDS | 65.0% |
| ! | AGCTCTTCGGAGGCACGTGC+CGG | - | chr8.1:73717298-73717317 | None:intergenic | 65.0% |
| GCCTCCGAAGAGCTGGAGCG+TGG | + | chr8.1:73717304-73717323 | MS.gene59601:CDS | 70.0% | |
| GGCACGTGCCTCCGAAGAGC+TGG | + | chr8.1:73717297-73717316 | MS.gene59601:CDS | 70.0% | |
| !! | CTGGAGCGTGGTGGTGGAGG+AGG | + | chr8.1:73717316-73717335 | MS.gene59601:CDS | 70.0% |
| !! | GAGCGTGGTGGTGGAGGAGG+AGG | + | chr8.1:73717319-73717338 | MS.gene59601:CDS | 70.0% |
| !! | GAGCTGGAGCGTGGTGGTGG+AGG | + | chr8.1:73717313-73717332 | MS.gene59601:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 73717229 | 73722398 | 73717229 | ID=MS.gene59601 |
| chr8.1 | mRNA | 73717229 | 73722398 | 73717229 | ID=MS.gene59601.t1;Parent=MS.gene59601 |
| chr8.1 | exon | 73717229 | 73717388 | 73717229 | ID=MS.gene59601.t1.exon1;Parent=MS.gene59601.t1 |
| chr8.1 | CDS | 73717229 | 73717388 | 73717229 | ID=cds.MS.gene59601.t1;Parent=MS.gene59601.t1 |
| chr8.1 | exon | 73719160 | 73719233 | 73719160 | ID=MS.gene59601.t1.exon2;Parent=MS.gene59601.t1 |
| chr8.1 | CDS | 73719160 | 73719233 | 73719160 | ID=cds.MS.gene59601.t1;Parent=MS.gene59601.t1 |
| chr8.1 | exon | 73719867 | 73719968 | 73719867 | ID=MS.gene59601.t1.exon3;Parent=MS.gene59601.t1 |
| chr8.1 | CDS | 73719867 | 73719968 | 73719867 | ID=cds.MS.gene59601.t1;Parent=MS.gene59601.t1 |
| chr8.1 | exon | 73720083 | 73720086 | 73720083 | ID=MS.gene59601.t1.exon4;Parent=MS.gene59601.t1 |
| chr8.1 | CDS | 73720083 | 73720086 | 73720083 | ID=cds.MS.gene59601.t1;Parent=MS.gene59601.t1 |
| chr8.1 | exon | 73720387 | 73720478 | 73720387 | ID=MS.gene59601.t1.exon5;Parent=MS.gene59601.t1 |
| chr8.1 | CDS | 73720387 | 73720478 | 73720387 | ID=cds.MS.gene59601.t1;Parent=MS.gene59601.t1 |
| chr8.1 | exon | 73721224 | 73721385 | 73721224 | ID=MS.gene59601.t1.exon6;Parent=MS.gene59601.t1 |
| chr8.1 | CDS | 73721224 | 73721385 | 73721224 | ID=cds.MS.gene59601.t1;Parent=MS.gene59601.t1 |
| chr8.1 | exon | 73721603 | 73721702 | 73721603 | ID=MS.gene59601.t1.exon7;Parent=MS.gene59601.t1 |
| chr8.1 | CDS | 73721603 | 73721702 | 73721603 | ID=cds.MS.gene59601.t1;Parent=MS.gene59601.t1 |
| chr8.1 | exon | 73722247 | 73722398 | 73722247 | ID=MS.gene59601.t1.exon8;Parent=MS.gene59601.t1 |
| chr8.1 | CDS | 73722247 | 73722398 | 73722247 | ID=cds.MS.gene59601.t1;Parent=MS.gene59601.t1 |
| Gene Sequence |
| Protein sequence |
