AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59793

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59793.t1 MTR_8g043650 93.365 211 14 0 1 211 1 211 1.16e-146 409
MS.gene59793.t1 MTR_1g105910 91.469 211 18 0 1 211 1 211 5.69e-144 402
MS.gene59793.t1 MTR_1g105920 89.573 211 22 0 1 211 1 211 8.82e-143 399
MS.gene59793.t1 MTR_2g030740 86.730 211 28 0 1 211 1 211 2.78e-137 385
MS.gene59793.t1 MTR_1g012570 88.152 211 25 0 1 211 1 211 4.45e-137 385
MS.gene59793.t1 MTR_3g052920 84.834 211 32 0 1 211 1 211 2.14e-134 378
MS.gene59793.t1 MTR_1g105905 83.505 194 32 0 18 211 1 194 1.18e-118 337
MS.gene59793.t1 MTR_3g052870 78.673 211 26 1 1 211 1 192 6.52e-117 333
MS.gene59793.t1 MTR_1g106070 85.714 182 26 0 1 182 1 182 8.11e-115 326
MS.gene59793.t1 MTR_3g030770 73.934 211 47 1 1 211 1 203 1.52e-110 317
MS.gene59793.t1 MTR_1g108510 73.934 211 47 1 1 211 1 203 5.40e-110 316
MS.gene59793.t1 MTR_1g108580 70.968 217 55 1 1 217 1 209 1.61e-106 307
MS.gene59793.t1 MTR_2g093190 72.512 211 50 1 1 211 1 203 7.30e-106 305
MS.gene59793.t1 MTR_0121s0080 71.429 210 60 0 1 210 1 210 1.50e-104 302
MS.gene59793.t1 MTR_1g077360 67.453 212 69 0 1 212 1 212 8.68e-103 298
MS.gene59793.t1 MTR_2g085280 66.509 212 71 0 1 212 1 212 1.64e-102 297
MS.gene59793.t1 MTR_2g085250 66.667 210 70 0 1 210 1 210 8.54e-102 295
MS.gene59793.t1 MTR_5g045560 67.773 211 68 0 1 211 1 211 3.17e-101 294
MS.gene59793.t1 MTR_1g075600 67.943 209 67 0 1 209 1 209 7.05e-101 293
MS.gene59793.t1 MTR_5g055100 64.929 211 74 0 1 211 1 211 4.60e-99 288
MS.gene59793.t1 MTR_5g053390 64.151 212 76 0 1 212 1 212 4.38e-95 278
MS.gene59793.t1 MTR_7g062350 60.664 211 82 1 3 212 14 224 7.51e-83 248
MS.gene59793.t1 MTR_1g075570 62.360 178 53 1 18 195 1 164 4.53e-68 207
MS.gene59793.t1 MTR_0121s0100 75.758 132 32 0 1 132 1 132 9.76e-67 202
MS.gene59793.t1 MTR_3g030780 71.970 132 37 0 1 132 1 132 8.30e-62 190
MS.gene59793.t1 MTR_3g080940 49.215 191 93 1 7 193 7 197 2.18e-61 192
MS.gene59793.t1 MTR_3g067910 66.019 103 35 0 21 123 2 104 7.36e-44 144
MS.gene59793.t1 MTR_2g105290 38.596 171 95 2 5 172 8 171 4.07e-38 131
MS.gene59793.t1 MTR_8g086290 40.361 166 89 2 5 167 8 166 5.85e-38 130
MS.gene59793.t1 MTR_7g028448 43.226 155 76 3 5 159 8 150 1.35e-31 114
MS.gene59793.t1 MTR_4g036915 43.226 155 76 3 5 159 8 150 1.35e-31 114
MS.gene59793.t1 MTR_1g108500 62.887 97 15 1 22 118 110 185 4.00e-29 112
MS.gene59793.t1 MTR_4g127140 37.569 181 93 4 5 172 8 181 8.06e-29 107
MS.gene59793.t1 MTR_3g067875 83.929 56 9 0 18 73 1 56 7.56e-27 99.0
MS.gene59793.t1 MTR_3g067915 48.936 94 48 0 33 126 3 96 3.50e-23 90.5
MS.gene59793.t1 MTR_3g067870 69.841 63 19 0 16 78 83 145 2.00e-22 90.1
MS.gene59793.t1 MTR_1g047550 59.420 69 28 0 9 77 2 70 6.10e-22 89.7
MS.gene59793.t1 MTR_8g079502 59.420 69 28 0 9 77 2 70 9.95e-22 89.0
MS.gene59793.t1 MTR_1g054265 42.735 117 63 2 9 125 2 114 1.31e-21 88.6
MS.gene59793.t1 MTR_4g131030 38.793 116 56 2 9 109 2 117 2.76e-21 88.6
MS.gene59793.t1 MTR_1g063160 44.643 112 57 3 9 118 2 110 3.14e-21 87.8
MS.gene59793.t1 MTR_8g051580 44.554 101 54 1 9 109 2 100 1.35e-20 86.3
MS.gene59793.t1 MTR_8g046350 37.692 130 73 2 9 135 2 126 1.33e-19 82.8
MS.gene59793.t1 MTR_4g094632 40.566 106 61 1 9 114 2 105 4.66e-19 81.3
MS.gene59793.t1 MTR_4g094638 41.509 106 61 1 9 113 2 107 4.60e-18 79.3
MS.gene59793.t1 MTR_4g102530 50.685 73 36 0 10 82 3 75 2.11e-17 78.2
MS.gene59793.t1 MTR_3g452380 42.453 106 51 1 3 108 11 106 2.31e-17 79.0
MS.gene59793.t1 MTR_4g093970 57.576 66 28 0 10 75 29 94 2.68e-17 78.6
MS.gene59793.t1 MTR_1g053070 33.333 165 95 3 9 172 2 152 2.83e-17 78.6
MS.gene59793.t1 MTR_3g005530 50.000 68 34 0 9 76 2 69 1.19e-16 76.6
MS.gene59793.t1 MTR_8g033270 51.471 68 33 0 9 76 2 69 2.47e-16 76.3
MS.gene59793.t1 MTR_3g102570 42.308 104 57 3 9 111 2 103 4.61e-16 76.3
MS.gene59793.t1 MTR_1g101970 50.000 68 34 0 9 76 2 69 7.63e-16 73.6
MS.gene59793.t1 MTR_8g087860 51.471 68 33 0 9 76 18 85 9.27e-16 74.3
MS.gene59793.t1 MTR_5g066180 50.000 68 34 0 9 76 2 69 1.07e-15 73.9
MS.gene59793.t1 MTR_6g464720 49.275 69 34 1 9 76 2 70 1.18e-15 74.3
MS.gene59793.t1 MTR_5g032150 30.047 213 126 8 9 201 2 211 1.81e-15 73.6
MS.gene59793.t1 MTR_5g032520 28.302 212 128 6 10 201 3 210 2.25e-15 73.2
MS.gene59793.t1 MTR_4g109830 47.826 69 35 1 9 76 2 70 2.26e-15 73.2
MS.gene59793.t1 MTR_2g017865 40.385 104 61 1 9 112 17 119 2.65e-15 73.6
MS.gene59793.t1 MTR_7g075870 38.182 110 66 1 10 119 3 110 2.81e-15 72.4
MS.gene59793.t1 MTR_8g033220 47.436 78 41 0 10 87 3 80 3.06e-15 72.8
MS.gene59793.t1 MTR_8g033220 47.436 78 41 0 10 87 3 80 3.57e-15 72.8
MS.gene59793.t1 MTR_2g009890 48.529 68 35 0 9 76 2 69 4.69e-15 73.2
MS.gene59793.t1 MTR_0003s0590 50.000 68 34 0 9 76 2 69 1.12e-14 71.6
MS.gene59793.t1 MTR_8g022970 31.818 154 92 3 8 155 17 163 1.65e-14 69.7
MS.gene59793.t1 MTR_8g066260 40.964 83 46 1 9 91 2 81 2.17e-14 70.5
MS.gene59793.t1 MTR_4g084740 46.053 76 39 2 9 83 2 76 2.21e-14 71.6
MS.gene59793.t1 MTR_3g437790 33.566 143 78 4 26 159 30 164 2.75e-14 69.3
MS.gene59793.t1 MTR_5g031000 48.529 68 35 0 9 76 2 69 3.26e-14 69.7
MS.gene59793.t1 MTR_5g031000 48.529 68 35 0 9 76 2 69 3.53e-14 70.1
MS.gene59793.t1 MTR_5g046870 47.826 69 35 1 9 76 2 70 3.54e-14 67.0
MS.gene59793.t1 MTR_7g075870 37.838 111 66 2 10 119 3 111 4.03e-14 69.3
MS.gene59793.t1 MTR_5g046790 45.070 71 36 1 9 79 2 69 4.49e-14 69.3
MS.gene59793.t1 MTR_2g461710 53.571 56 26 0 9 64 2 57 5.64e-14 65.1
MS.gene59793.t1 MTR_6g015975 46.377 69 36 1 9 76 2 70 1.94e-13 68.2
MS.gene59793.t1 MTR_7g016630 43.478 69 38 1 9 76 2 70 2.25e-13 68.2
MS.gene59793.t1 MTR_7g016600 46.377 69 36 1 9 76 2 70 2.43e-13 67.8
MS.gene59793.t1 MTR_1g038300 47.143 70 35 1 9 76 2 71 2.57e-13 67.4
MS.gene59793.t1 MTR_5g021270 47.143 70 35 1 9 76 2 71 2.95e-13 67.4
MS.gene59793.t1 MTR_5g021270 47.143 70 35 1 9 76 2 71 3.12e-13 67.4
MS.gene59793.t1 MTR_3g084980 47.826 69 35 1 9 76 2 70 6.29e-13 66.6
MS.gene59793.t1 MTR_8g097090 46.377 69 36 1 9 76 2 70 7.87e-13 66.2
MS.gene59793.t1 MTR_7g075850 45.714 70 36 1 9 76 2 71 8.55e-13 66.2
MS.gene59793.t1 MTR_1g029670 42.857 70 38 1 9 76 2 71 1.44e-12 64.3
MS.gene59793.t1 MTR_5g066960 47.368 57 30 0 9 65 2 58 1.68e-12 61.2
MS.gene59793.t1 MTR_4g109810 50.000 56 28 0 9 64 2 57 3.46e-12 64.3
MS.gene59793.t1 MTR_3g088615 41.429 70 39 1 9 76 2 71 5.96e-12 62.8
MS.gene59793.t1 MTR_4g051538 31.875 160 97 3 5 164 5 152 6.55e-12 63.5
MS.gene59793.t1 MTR_3g113030 46.032 63 34 0 9 71 2 64 8.46e-12 63.2
MS.gene59793.t1 MTR_3g109930 30.000 140 82 3 27 159 20 150 9.54e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59793.t1 AT5G60440 53.191 188 81 3 5 189 3 186 2.20e-59 189
MS.gene59793.t1 AT2G24840 47.561 164 75 4 6 163 60 218 1.43e-40 140
MS.gene59793.t1 AT4G36590 46.296 162 81 2 5 160 3 164 4.62e-39 136
MS.gene59793.t1 AT1G01530 41.579 190 103 4 4 192 2 184 1.89e-37 132
MS.gene59793.t1 AT1G65360 39.153 189 108 3 5 192 3 185 6.42e-37 130
MS.gene59793.t1 AT2G34440 45.299 117 55 2 9 121 2 113 3.96e-26 100
MS.gene59793.t1 AT3G66656 41.985 131 71 2 9 134 2 132 1.97e-25 98.6
MS.gene59793.t1 AT3G04100 30.464 151 101 2 2 148 7 157 7.28e-22 90.1
MS.gene59793.t1 AT1G72350 34.694 147 63 4 9 155 43 156 1.32e-19 84.7
MS.gene59793.t1 AT1G28460 31.429 140 93 1 5 141 4 143 3.69e-18 79.7
MS.gene59793.t1 AT4G22950 49.351 77 39 0 10 86 3 79 4.69e-18 79.3
MS.gene59793.t1 AT4G09960 46.512 86 45 1 9 93 2 87 7.27e-18 79.7
MS.gene59793.t1 AT4G09960 46.512 86 45 1 9 93 2 87 8.33e-18 79.7
MS.gene59793.t1 AT4G09960 46.512 86 45 1 9 93 3 88 8.74e-18 79.7
MS.gene59793.t1 AT2G45650 52.941 68 32 0 9 76 2 69 9.43e-18 80.1
MS.gene59793.t1 AT4G09960 46.512 86 45 1 9 93 12 97 1.16e-17 79.7
MS.gene59793.t1 AT4G09960 46.512 86 45 1 9 93 28 113 1.88e-17 79.3
MS.gene59793.t1 AT4G22950 50.000 76 38 0 10 85 3 78 2.14e-17 78.6
MS.gene59793.t1 AT4G22950 50.000 76 38 0 10 85 3 78 2.14e-17 78.6
MS.gene59793.t1 AT4G09960 46.512 86 45 1 9 93 97 182 4.37e-17 79.3
MS.gene59793.t1 AT4G18960 42.308 104 49 2 5 108 15 107 1.68e-16 76.6
MS.gene59793.t1 AT1G29962 29.070 172 115 4 5 169 4 175 1.92e-16 75.1
MS.gene59793.t1 AT2G45660 50.000 68 34 0 10 77 3 70 2.55e-16 74.3
MS.gene59793.t1 AT3G61120 51.471 68 33 0 9 76 2 69 4.20e-16 75.5
MS.gene59793.t1 AT3G57230 47.059 68 36 0 9 76 2 69 7.09e-16 72.8
MS.gene59793.t1 AT2G22540 51.471 68 33 0 9 76 2 69 7.40e-16 74.7
MS.gene59793.t1 AT2G22540 51.471 68 33 0 9 76 2 69 7.40e-16 74.7
MS.gene59793.t1 AT2G42830 50.704 71 35 0 6 76 14 84 8.00e-16 74.7
MS.gene59793.t1 AT2G45660 50.000 68 34 0 10 77 3 70 8.12e-16 73.9
MS.gene59793.t1 AT2G42830 50.704 71 35 0 6 76 14 84 8.74e-16 74.7
MS.gene59793.t1 AT3G58780 50.704 71 35 0 6 76 14 84 9.01e-16 74.7
MS.gene59793.t1 AT3G58780 50.704 71 35 0 6 76 20 90 1.01e-15 74.7
MS.gene59793.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.18e-15 70.9
MS.gene59793.t1 AT3G58780 50.704 71 35 0 6 76 14 84 1.24e-15 74.7
MS.gene59793.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.85e-15 71.6
MS.gene59793.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.85e-15 71.6
MS.gene59793.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.85e-15 71.6
MS.gene59793.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.85e-15 71.6
MS.gene59793.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.85e-15 71.6
MS.gene59793.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.33e-15 71.6
MS.gene59793.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.33e-15 71.6
MS.gene59793.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.33e-15 71.6
MS.gene59793.t1 AT3G57230 47.059 68 36 0 9 76 2 69 2.64e-15 73.2
MS.gene59793.t1 AT3G57230 47.059 68 36 0 9 76 2 69 2.64e-15 73.2
MS.gene59793.t1 AT5G13790 41.935 93 45 1 9 101 2 85 3.83e-15 73.2
MS.gene59793.t1 AT1G22130 36.190 105 66 1 9 112 2 106 3.94e-15 73.9
MS.gene59793.t1 AT4G24540 50.000 68 34 0 9 76 2 69 4.56e-15 72.0
MS.gene59793.t1 AT5G51870 50.746 67 33 0 10 76 3 69 5.19e-15 70.9
MS.gene59793.t1 AT4G11880 48.611 72 36 1 10 80 3 74 5.67e-15 71.2
MS.gene59793.t1 AT4G11880 48.611 72 36 1 10 80 3 74 5.67e-15 71.2
MS.gene59793.t1 AT1G77950 46.053 76 39 2 9 83 2 76 5.81e-15 72.4
MS.gene59793.t1 AT1G77950 46.053 76 39 2 9 83 2 76 5.81e-15 72.4
MS.gene59793.t1 AT1G77950 46.053 76 39 2 9 83 2 76 5.81e-15 72.4
MS.gene59793.t1 AT1G77950 46.053 76 39 2 9 83 2 76 5.81e-15 72.4
MS.gene59793.t1 AT3G57390 48.529 68 35 0 9 76 2 69 6.35e-15 72.0
MS.gene59793.t1 AT5G62165 49.254 67 34 0 10 76 3 69 6.83e-15 71.2
MS.gene59793.t1 AT5G62165 49.254 67 34 0 10 76 3 69 6.83e-15 71.2
MS.gene59793.t1 AT1G77980 37.143 105 65 1 9 112 2 106 7.49e-15 73.2
MS.gene59793.t1 AT5G13790 50.000 68 34 0 9 76 2 69 7.58e-15 72.4
MS.gene59793.t1 AT5G62165 49.254 67 34 0 10 76 3 69 7.95e-15 71.2
MS.gene59793.t1 AT5G62165 49.254 67 34 0 10 76 3 69 7.95e-15 71.2
MS.gene59793.t1 AT5G62165 49.254 67 34 0 10 76 3 69 7.95e-15 71.2
MS.gene59793.t1 AT5G51870 47.222 72 38 0 5 76 21 92 7.98e-15 70.9
MS.gene59793.t1 AT5G51870 50.746 67 33 0 10 76 3 69 8.03e-15 71.2
MS.gene59793.t1 AT1G69120 43.373 83 44 1 9 91 2 81 9.06e-15 71.6
MS.gene59793.t1 AT1G17310 50.633 79 37 1 8 86 47 123 9.28e-15 71.2
MS.gene59793.t1 AT3G57390 48.529 68 35 0 9 76 2 69 1.01e-14 72.0
MS.gene59793.t1 AT5G60910 49.296 71 33 1 9 79 2 69 1.09e-14 71.6
MS.gene59793.t1 AT4G11880 48.611 72 36 1 10 80 3 74 1.16e-14 71.2
MS.gene59793.t1 AT4G11880 48.611 72 36 1 10 80 3 74 1.16e-14 71.2
MS.gene59793.t1 AT1G26310 47.826 69 35 1 9 76 2 70 1.18e-14 71.6
MS.gene59793.t1 AT1G17310 34.524 168 69 5 8 170 58 189 1.18e-14 71.2
MS.gene59793.t1 AT5G51860 50.746 67 33 0 10 76 3 69 1.29e-14 70.5
MS.gene59793.t1 AT5G51860 50.746 67 33 0 10 76 3 69 1.33e-14 70.9
MS.gene59793.t1 AT1G69120 43.373 83 44 1 9 91 2 81 1.35e-14 71.6
MS.gene59793.t1 AT5G51870 50.746 67 33 0 10 76 3 69 1.37e-14 70.9
MS.gene59793.t1 AT5G51870 50.746 67 33 0 10 76 13 79 1.50e-14 70.9
MS.gene59793.t1 AT2G22630 47.059 68 36 0 9 76 2 69 2.43e-14 70.5
MS.gene59793.t1 AT2G22630 47.059 68 36 0 9 76 2 69 2.43e-14 70.5
MS.gene59793.t1 AT5G10140 47.826 69 35 1 9 76 2 70 3.76e-14 68.6
MS.gene59793.t1 AT4G37940 45.588 68 37 0 9 76 2 69 3.83e-14 69.7
MS.gene59793.t1 AT4G37940 45.588 68 37 0 9 76 2 69 4.55e-14 69.7
MS.gene59793.t1 AT1G28450 29.371 143 95 3 5 141 4 146 4.56e-14 68.6
MS.gene59793.t1 AT4G37940 45.588 68 37 0 9 76 2 69 4.73e-14 68.6
MS.gene59793.t1 AT5G10140 47.826 69 35 1 9 76 2 70 5.08e-14 68.6
MS.gene59793.t1 AT5G10140 47.826 69 35 1 9 76 2 70 5.47e-14 68.6
MS.gene59793.t1 AT5G10140 47.826 69 35 1 9 76 2 70 5.55e-14 68.6
MS.gene59793.t1 AT3G30260 29.878 164 99 4 9 172 2 149 8.36e-14 69.3
MS.gene59793.t1 AT2G14210 46.377 69 36 1 9 76 2 70 1.08e-13 68.6
MS.gene59793.t1 AT2G14210 46.377 69 36 1 9 76 2 70 1.23e-13 68.6
MS.gene59793.t1 AT3G02310 47.826 69 35 1 9 76 2 70 1.40e-13 67.8
MS.gene59793.t1 AT2G22540 50.746 67 28 1 10 76 3 64 1.79e-13 68.2
MS.gene59793.t1 AT3G54340 47.619 63 33 0 9 71 2 64 1.95e-13 67.8
MS.gene59793.t1 AT5G15800 46.377 69 36 1 9 76 2 70 3.47e-13 67.4
MS.gene59793.t1 AT3G02310 47.826 69 35 1 9 76 2 70 3.90e-13 67.4
MS.gene59793.t1 AT5G23260 43.617 94 45 3 5 90 12 105 4.12e-13 67.4
MS.gene59793.t1 AT5G23260 42.268 97 48 3 2 90 9 105 4.42e-13 67.4
MS.gene59793.t1 AT5G20240 48.387 62 32 0 9 70 2 63 4.56e-13 65.1
MS.gene59793.t1 AT5G15800 46.377 69 36 1 9 76 2 70 4.72e-13 67.4
MS.gene59793.t1 AT5G23260 43.182 88 44 2 9 90 2 89 6.37e-13 66.6
MS.gene59793.t1 AT5G23260 43.182 88 44 2 9 90 2 89 6.81e-13 66.6
MS.gene59793.t1 AT2G03710 51.786 56 27 0 9 64 2 57 8.25e-13 65.5
MS.gene59793.t1 AT3G58780 51.667 60 29 0 6 65 14 73 9.45e-13 66.2
MS.gene59793.t1 AT1G24260 46.377 69 36 1 9 76 2 70 9.78e-13 66.2
MS.gene59793.t1 AT1G24260 46.377 69 36 1 9 76 2 70 9.80e-13 66.2
MS.gene59793.t1 AT1G24260 46.377 69 36 1 9 76 2 70 1.04e-12 65.9
MS.gene59793.t1 AT3G58780 51.667 60 29 0 6 65 14 73 1.16e-12 66.2
MS.gene59793.t1 AT5G20240 48.387 62 32 0 9 70 2 63 1.71e-12 64.7
MS.gene59793.t1 AT2G03710 51.786 56 27 0 9 64 2 57 3.05e-12 65.1
MS.gene59793.t1 AT2G03710 51.786 56 27 0 9 64 2 57 3.14e-12 64.7
MS.gene59793.t1 AT5G65050 43.478 69 38 1 9 76 2 70 4.85e-12 63.2
MS.gene59793.t1 AT1G47760 34.483 116 61 3 9 123 2 103 5.76e-12 62.8
MS.gene59793.t1 AT5G65070 40.580 69 40 1 9 76 2 70 8.73e-12 61.6
MS.gene59793.t1 AT5G65050 43.478 69 38 1 9 76 2 70 9.88e-12 62.4
MS.gene59793.t1 AT5G65050 43.478 69 38 1 9 76 2 70 1.06e-11 62.0
MS.gene59793.t1 AT5G65050 43.478 69 38 1 9 76 2 70 1.08e-11 62.4
MS.gene59793.t1 AT5G65060 43.478 69 38 1 9 76 2 70 1.41e-11 62.0
MS.gene59793.t1 AT5G65060 43.478 69 38 1 9 76 2 70 1.82e-11 61.6
MS.gene59793.t1 AT1G46408 33.613 119 70 3 10 119 5 123 2.06e-11 62.8
MS.gene59793.t1 AT5G65060 43.478 69 38 1 9 76 2 70 2.14e-11 61.6
MS.gene59793.t1 AT5G65070 40.580 69 40 1 9 76 2 70 2.20e-11 61.6
MS.gene59793.t1 AT1G71692 42.029 69 39 1 10 77 3 71 2.31e-11 61.6
MS.gene59793.t1 AT5G65070 40.580 69 40 1 9 76 2 70 3.32e-11 61.2
MS.gene59793.t1 AT5G65070 40.580 69 40 1 9 76 2 70 3.57e-11 61.6

Find 56 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGTTTGGTTTCAACAATA+TGG 0.234944 8.3:+55021795 MS.gene59793:CDS
ATTTGAGTTTGCGGAGGATT+TGG 0.289021 8.3:-55021731 None:intergenic
TCTTCTCCATGTCCAGTAAC+TGG 0.302941 8.3:-55021472 None:intergenic
TGGTGGGCTGGTCCCGTTGA+TGG 0.316276 8.3:+55021545 MS.gene59793:CDS
AGGCGACCGAGGCTCAATTT+TGG 0.319875 8.3:+55021525 MS.gene59793:CDS
ATTGCATGGTACCATTGTTT+TGG 0.337688 8.3:-55021388 None:intergenic
TTGTTTGGTTTCAACAATAT+GGG 0.345119 8.3:+55021796 MS.gene59793:CDS
GACTCAGATCAACCAGTTAC+TGG 0.372422 8.3:+55021460 MS.gene59793:CDS
ATGTTGCAGTCTCATTTGTT+TGG 0.376821 8.3:+55021781 MS.gene59793:CDS
TGCTGATAGGCTTGTAATCC+AGG 0.383576 8.3:+55021637 MS.gene59793:CDS
GTCCCGTTGATGGGATGAAT+AGG 0.432754 8.3:+55021555 MS.gene59793:CDS
TTTGGATGAGACTAAGAAAC+TGG 0.433965 8.3:+55021604 MS.gene59793:CDS
GCGGAGGATTTGGTTGATGA+TGG 0.439291 8.3:-55021721 None:intergenic
AACAAATGAGACTGCAACAT+AGG 0.451158 8.3:-55021778 None:intergenic
GGTGGGCTGGTCCCGTTGAT+GGG 0.452333 8.3:+55021546 MS.gene59793:CDS
TCCCGTTGATGGGATGAATA+GGG 0.453040 8.3:+55021556 MS.gene59793:CDS
TGGTTGCACATCATGCTGAT+AGG 0.453644 8.3:+55021624 MS.gene59793:CDS
CCTCGGTCGCCTTGCGCAAG+TGG 0.465805 8.3:-55021514 None:intergenic
CTCTATGACCGTATCAACAT+TGG 0.477809 8.3:-55021342 None:intergenic
GCCCTATTCATCCCATCAAC+GGG 0.481029 8.3:-55021557 None:intergenic
GGAGGTGGATATGGACCCTC+TGG 0.496777 8.3:+55021823 MS.gene59793:CDS
ATGATGGAGAGGCATGTTAG+AGG 0.501643 8.3:-55021705 None:intergenic
GCTGGAAACATTTGAGTTTG+CGG 0.508183 8.3:-55021740 None:intergenic
ACTGAGAGTGCAAAGCTCAC+TGG 0.526727 8.3:-55021258 None:intergenic
GGCCCTATTCATCCCATCAA+CGG 0.536262 8.3:-55021558 None:intergenic
TCTATGACCGTATCAACATT+GGG 0.539713 8.3:-55021341 None:intergenic
TGGCCAACCCAATGTTGATA+CGG 0.545005 8.3:+55021334 MS.gene59793:CDS
TTAAGGTGGATCTAAGGGCT+CGG 0.548099 8.3:-55021857 None:intergenic
CCACTTGCGCAAGGCGACCG+AGG 0.551221 8.3:+55021514 MS.gene59793:CDS
CTTTCTCGAAGCGCCGTAGT+GGG 0.553366 8.3:+55021222 MS.gene59793:CDS
TGTTTGGTTTCAACAATATG+GGG 0.556331 8.3:+55021797 MS.gene59793:CDS
ATTCAACCATGTCGAGTGGA+AGG 0.567884 8.3:+55021135 None:intergenic
ACAAATGAGACTGCAACATA+GGG 0.571944 8.3:-55021777 None:intergenic
ACTTTCTCGAAGCGCCGTAG+TGG 0.571963 8.3:+55021221 MS.gene59793:CDS
GCTCACGCACATTGGCGCTA+CGG 0.585858 8.3:-55021424 None:intergenic
GATCAACCAGTTACTGGACA+TGG 0.586550 8.3:+55021466 MS.gene59793:CDS
AATGAAAATACCTTCTCCCC+AGG 0.587583 8.3:-55021311 None:intergenic
AGCCCACCAAAATTGAGCCT+CGG 0.589062 8.3:-55021531 None:intergenic
TGACCGTATCAACATTGGGT+TGG 0.600758 8.3:-55021337 None:intergenic
TGGTTTGAGTAGGAGCACCC+TGG 0.605264 8.3:-55021655 None:intergenic
GTTTGGTTTCAACAATATGG+GGG 0.607401 8.3:+55021798 MS.gene59793:CDS
AGTGAGCTTTGCACTCTCAG+TGG 0.609659 8.3:+55021260 MS.gene59793:CDS
AGAGCTGAACCACTTGCGCA+AGG 0.610527 8.3:+55021505 MS.gene59793:CDS
CTTTCTTGAAGAGCCCACTA+CGG 0.610979 8.3:-55021235 None:intergenic
GGATTTGGTTGATGATGGAG+AGG 0.611456 8.3:-55021716 None:intergenic
AGTATTGAGCTCACGCACAT+TGG 0.613452 8.3:-55021432 None:intergenic
TGTGATTCAACCATGTCGAG+TGG 0.620546 8.3:+55021131 None:intergenic
GCTGATAGGCTTGTAATCCA+GGG 0.636302 8.3:+55021638 MS.gene59793:CDS
TTTGGTTTCAACAATATGGG+GGG 0.638238 8.3:+55021799 MS.gene59793:CDS
TGGTACCATGCAATTCATTG+AGG 0.638950 8.3:+55021397 MS.gene59793:CDS
CGAGTCCCACCCCAAAACAA+TGG 0.639467 8.3:+55021377 MS.gene59793:CDS
GTGAGCCTCAATGAATTGCA+TGG 0.640763 8.3:-55021402 None:intergenic
GGAAACATTTGAGTTTGCGG+AGG 0.647148 8.3:-55021737 None:intergenic
TCGGATCAAAAGAATCCAGA+GGG 0.678771 8.3:-55021838 None:intergenic
CTCGGATCAAAAGAATCCAG+AGG 0.678961 8.3:-55021839 None:intergenic
TCGAGTGGAAGGAAAAGCCG+AGG 0.691796 8.3:+55021146 MS.gene59793:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTTGAAAAAATCAAGTT+GGG - chr8.3:55021582-55021601 None:intergenic 20.0%
!!! TTTTTTTCATCTCAATCTTT+TGG - chr8.3:55021175-55021194 None:intergenic 20.0%
! ATTTCCAACAAAAAATGGAA+TGG - chr8.3:55021678-55021697 None:intergenic 25.0%
!! TTGTTTGGTTTCAACAATAT+GGG + chr8.3:55021796-55021815 MS.gene59793:CDS 25.0%
!! TTTGTTTGGTTTCAACAATA+TGG + chr8.3:55021795-55021814 MS.gene59793:CDS 25.0%
!!! ATTCCATTTTTTGTTGGAAA+TGG + chr8.3:55021677-55021696 MS.gene59793:CDS 25.0%
!!! CCAACTTGATTTTTTCAAAA+AGG + chr8.3:55021580-55021599 MS.gene59793:CDS 25.0%
!!! CCTTTTTGAAAAAATCAAGT+TGG - chr8.3:55021583-55021602 None:intergenic 25.0%
!!! TGATTTTTTCAAAAAGGCTT+TGG + chr8.3:55021586-55021605 MS.gene59793:CDS 25.0%
AAAAATGGAATGGTTTGAGT+AGG - chr8.3:55021668-55021687 None:intergenic 30.0%
GAACCATTTCCAACAAAAAA+TGG - chr8.3:55021683-55021702 None:intergenic 30.0%
! TGTTTGGTTTCAACAATATG+GGG + chr8.3:55021797-55021816 MS.gene59793:CDS 30.0%
!!! CAAACCATTCCATTTTTTGT+TGG + chr8.3:55021671-55021690 MS.gene59793:CDS 30.0%
AACAAATGAGACTGCAACAT+AGG - chr8.3:55021781-55021800 None:intergenic 35.0%
ACAAATGAGACTGCAACATA+GGG - chr8.3:55021780-55021799 None:intergenic 35.0%
ATGTTGCAGTCTCATTTGTT+TGG + chr8.3:55021781-55021800 MS.gene59793:CDS 35.0%
TCTATGACCGTATCAACATT+GGG - chr8.3:55021344-55021363 None:intergenic 35.0%
TTTGGATGAGACTAAGAAAC+TGG + chr8.3:55021604-55021623 MS.gene59793:CDS 35.0%
! ATTGCATGGTACCATTGTTT+TGG - chr8.3:55021391-55021410 None:intergenic 35.0%
! GTTTGGTTTCAACAATATGG+GGG + chr8.3:55021798-55021817 MS.gene59793:CDS 35.0%
! TTGCATGGTACCATTGTTTT+GGG - chr8.3:55021390-55021409 None:intergenic 35.0%
! TTTGGTTTCAACAATATGGG+GGG + chr8.3:55021799-55021818 MS.gene59793:CDS 35.0%
AATGAAAATACCTTCTCCCC+AGG - chr8.3:55021314-55021333 None:intergenic 40.0%
CTCTATGACCGTATCAACAT+TGG - chr8.3:55021345-55021364 None:intergenic 40.0%
TCGGATCAAAAGAATCCAGA+GGG - chr8.3:55021841-55021860 None:intergenic 40.0%
TGGTACCATGCAATTCATTG+AGG + chr8.3:55021397-55021416 MS.gene59793:CDS 40.0%
! ATTTGAGTTTGCGGAGGATT+TGG - chr8.3:55021734-55021753 None:intergenic 40.0%
! GCTGGAAACATTTGAGTTTG+CGG - chr8.3:55021743-55021762 None:intergenic 40.0%
!! AGGGTTCTGAAAAATTGTGC+TGG - chr8.3:55021761-55021780 None:intergenic 40.0%
!! TGCATGGTACCATTGTTTTG+GGG - chr8.3:55021389-55021408 None:intergenic 40.0%
!!! GGGGAGAAGGTATTTTCATT+TGG + chr8.3:55021314-55021333 MS.gene59793:CDS 40.0%
CTCGGATCAAAAGAATCCAG+AGG - chr8.3:55021842-55021861 None:intergenic 45.0%
CTTTCTTGAAGAGCCCACTA+CGG - chr8.3:55021238-55021257 None:intergenic 45.0%
GACTCAGATCAACCAGTTAC+TGG + chr8.3:55021460-55021479 MS.gene59793:CDS 45.0%
GATCAACCAGTTACTGGACA+TGG + chr8.3:55021466-55021485 MS.gene59793:CDS 45.0%
GCTGATAGGCTTGTAATCCA+GGG + chr8.3:55021638-55021657 MS.gene59793:CDS 45.0%
GTGAGCCTCAATGAATTGCA+TGG - chr8.3:55021405-55021424 None:intergenic 45.0%
TCTTCTCCATGTCCAGTAAC+TGG - chr8.3:55021475-55021494 None:intergenic 45.0%
TGACCGTATCAACATTGGGT+TGG - chr8.3:55021340-55021359 None:intergenic 45.0%
TGCTGATAGGCTTGTAATCC+AGG + chr8.3:55021637-55021656 MS.gene59793:CDS 45.0%
TGGCCAACCCAATGTTGATA+CGG + chr8.3:55021334-55021353 MS.gene59793:CDS 45.0%
TGGTTGCACATCATGCTGAT+AGG + chr8.3:55021624-55021643 MS.gene59793:CDS 45.0%
! AGTATTGAGCTCACGCACAT+TGG - chr8.3:55021435-55021454 None:intergenic 45.0%
! ATGATGGAGAGGCATGTTAG+AGG - chr8.3:55021708-55021727 None:intergenic 45.0%
! GGAAACATTTGAGTTTGCGG+AGG - chr8.3:55021740-55021759 None:intergenic 45.0%
! TCCCGTTGATGGGATGAATA+GGG + chr8.3:55021556-55021575 MS.gene59793:CDS 45.0%
! TCTCAATCTTTTGGCGACCT+CGG - chr8.3:55021166-55021185 None:intergenic 45.0%
!! CTCTCGTTGTTTTCTCACCT+GGG + chr8.3:55021294-55021313 MS.gene59793:CDS 45.0%
!! GGATTTGGTTGATGATGGAG+AGG - chr8.3:55021719-55021738 None:intergenic 45.0%
!! TCTCGTTGTTTTCTCACCTG+GGG + chr8.3:55021295-55021314 MS.gene59793:CDS 45.0%
!!! ATGGTACCATTGTTTTGGGG+TGG - chr8.3:55021386-55021405 None:intergenic 45.0%
!!! TGGTACCATTGTTTTGGGGT+GGG - chr8.3:55021385-55021404 None:intergenic 45.0%
AGCCCACCAAAATTGAGCCT+CGG - chr8.3:55021534-55021553 None:intergenic 50.0%
AGTGAGCTTTGCACTCTCAG+TGG + chr8.3:55021260-55021279 MS.gene59793:CDS 50.0%
GCCCTATTCATCCCATCAAC+GGG - chr8.3:55021560-55021579 None:intergenic 50.0%
GGCCCTATTCATCCCATCAA+CGG - chr8.3:55021561-55021580 None:intergenic 50.0%
GGTTTCAACAATATGGGGGG+AGG + chr8.3:55021802-55021821 MS.gene59793:CDS 50.0%
TTCAACAATATGGGGGGAGG+AGG + chr8.3:55021805-55021824 MS.gene59793:CDS 50.0%
! ACTGAGAGTGCAAAGCTCAC+TGG - chr8.3:55021261-55021280 None:intergenic 50.0%
! GTCCCGTTGATGGGATGAAT+AGG + chr8.3:55021555-55021574 MS.gene59793:CDS 50.0%
! TGTTTTCTCACCTGGGGAGA+AGG + chr8.3:55021301-55021320 MS.gene59793:CDS 50.0%
!! GACCGAGGCTCAATTTTGGT+GGG + chr8.3:55021529-55021548 MS.gene59793:CDS 50.0%
!! GCGGAGGATTTGGTTGATGA+TGG - chr8.3:55021724-55021743 None:intergenic 50.0%
!! GCTCTCGTTGTTTTCTCACC+TGG + chr8.3:55021293-55021312 MS.gene59793:CDS 50.0%
AACAATATGGGGGGAGGAGG+TGG + chr8.3:55021808-55021827 MS.gene59793:CDS 55.0%
AGAGCTGAACCACTTGCGCA+AGG + chr8.3:55021505-55021524 MS.gene59793:CDS 55.0%
CGAGTCCCACCCCAAAACAA+TGG + chr8.3:55021377-55021396 MS.gene59793:CDS 55.0%
TCGAGTGGAAGGAAAAGCCG+AGG + chr8.3:55021146-55021165 MS.gene59793:CDS 55.0%
! AGGCGACCGAGGCTCAATTT+TGG + chr8.3:55021525-55021544 MS.gene59793:CDS 55.0%
! CGACCGAGGCTCAATTTTGG+TGG + chr8.3:55021528-55021547 MS.gene59793:CDS 55.0%
!! ACTTTCTCGAAGCGCCGTAG+TGG + chr8.3:55021221-55021240 MS.gene59793:CDS 55.0%
!! CTTTCTCGAAGCGCCGTAGT+GGG + chr8.3:55021222-55021241 MS.gene59793:CDS 55.0%
!! GAGGCTCAATTTTGGTGGGC+TGG + chr8.3:55021533-55021552 MS.gene59793:CDS 55.0%
!! TGGTTTGAGTAGGAGCACCC+TGG - chr8.3:55021658-55021677 None:intergenic 55.0%
ATGGGGGGAGGAGGTGGATA+TGG + chr8.3:55021814-55021833 MS.gene59793:CDS 60.0%
GCTCACGCACATTGGCGCTA+CGG - chr8.3:55021427-55021446 None:intergenic 60.0%
GGAGGTGGATATGGACCCTC+TGG + chr8.3:55021823-55021842 MS.gene59793:CDS 60.0%
!! GGTGGGCTGGTCCCGTTGAT+GGG + chr8.3:55021546-55021565 MS.gene59793:CDS 65.0%
!! TGGTGGGCTGGTCCCGTTGA+TGG + chr8.3:55021545-55021564 MS.gene59793:CDS 65.0%
CCACTTGCGCAAGGCGACCG+AGG + chr8.3:55021514-55021533 MS.gene59793:CDS 70.0%
CCTCGGTCGCCTTGCGCAAG+TGG - chr8.3:55021517-55021536 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 55021143 55021868 55021143 ID=MS.gene59793
chr8.3 mRNA 55021143 55021868 55021143 ID=MS.gene59793.t1;Parent=MS.gene59793
chr8.3 exon 55021143 55021868 55021143 ID=MS.gene59793.t1.exon1;Parent=MS.gene59793.t1
chr8.3 CDS 55021143 55021868 55021143 ID=cds.MS.gene59793.t1;Parent=MS.gene59793.t1
Gene Sequence

>MS.gene59793

ATGTCGAGTGGAAGGAAAAGCCGAGGTCGCCAAAAGATTGAGATGAAAAAAATGAGCAACGAGAGCAACTTGCAAGTGACTTTCTCGAAGCGCCGTAGTGGGCTCTTCAAGAAAGCCAGTGAGCTTTGCACTCTCAGTGGTGCAGATGTTGCTCTCGTTGTTTTCTCACCTGGGGAGAAGGTATTTTCATTTGGCCAACCCAATGTTGATACGGTCATAGAGCGTTATCTCTCTCGAGTCCCACCCCAAAACAATGGTACCATGCAATTCATTGAGGCTCACCGTAGCGCCAATGTGCGTGAGCTCAATACTCAGCTGACTCAGATCAACCAGTTACTGGACATGGAGAAGAAACGTGCTGAAGAGCTGAACCACTTGCGCAAGGCGACCGAGGCTCAATTTTGGTGGGCTGGTCCCGTTGATGGGATGAATAGGGCCCAACTTGATTTTTTCAAAAAGGCTTTGGATGAGACTAAGAAACTGGTTGCACATCATGCTGATAGGCTTGTAATCCAGGGTGCTCCTACTCAAACCATTCCATTTTTTGTTGGAAATGGTTCATCCTCTAACATGCCTCTCCATCATCAACCAAATCCTCCGCAAACTCAAATGTTTCCAGCACAATTTTTCAGAACCCTATGTTGCAGTCTCATTTGTTTGGTTTCAACAATATGGGGGGAGGAGGTGGATATGGACCCTCTGGATTCTTTTGATCCGAGCCCTTAG
Protein sequence

>MS.gene59793.t1

MSSGRKSRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLSGADVALVVFSPGEKVFSFGQPNVDTVIERYLSRVPPQNNGTMQFIEAHRSANVRELNTQLTQINQLLDMEKKRAEELNHLRKATEAQFWWAGPVDGMNRAQLDFFKKALDETKKLVAHHADRLVIQGAPTQTIPFFVGNGSSSNMPLHHQPNPPQTQMFPAQFFRTLCCSLICLVSTIWGEEVDMDPLDSFDPSP