Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59963.t1 | XP_003609376.2 | 97.3 | 480 | 12 | 1 | 1 | 480 | 1 | 479 | 4.90E-259 | 903.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59963.t1 | E5KGE0 | 62.8 | 492 | 167 | 5 | 1 | 480 | 1 | 488 | 9.0e-161 | 568.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59963.t1 | G7JE65 | 97.3 | 480 | 12 | 1 | 1 | 480 | 1 | 479 | 3.5e-259 | 903.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067452 | MS.gene59963 | PPI |
| MS.gene85936 | MS.gene59963 | PPI |
| MS.gene83572 | MS.gene59963 | PPI |
| MS.gene86975 | MS.gene59963 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59963.t1 | MTR_4g114970 | 97.500 | 480 | 11 | 1 | 1 | 480 | 1 | 479 | 0.0 | 979 |
| MS.gene59963.t1 | MTR_4g114970 | 97.455 | 393 | 9 | 1 | 1 | 393 | 1 | 392 | 0.0 | 800 |
| MS.gene59963.t1 | MTR_2g104600 | 46.747 | 415 | 181 | 5 | 27 | 441 | 27 | 401 | 1.65e-131 | 387 |
| MS.gene59963.t1 | MTR_2g104600 | 43.614 | 415 | 178 | 6 | 27 | 441 | 27 | 385 | 2.42e-119 | 356 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59963.t1 | AT2G42160 | 61.179 | 492 | 175 | 6 | 1 | 480 | 1 | 488 | 0.0 | 629 |
| MS.gene59963.t1 | AT2G42160 | 62.045 | 440 | 153 | 4 | 1 | 429 | 1 | 437 | 0.0 | 577 |
| MS.gene59963.t1 | AT2G42160 | 62.129 | 404 | 139 | 4 | 1 | 393 | 1 | 401 | 0.0 | 531 |
| MS.gene59963.t1 | AT2G26000 | 41.416 | 466 | 252 | 9 | 27 | 480 | 22 | 478 | 7.56e-129 | 382 |
| MS.gene59963.t1 | AT2G26000 | 41.416 | 466 | 252 | 9 | 27 | 480 | 22 | 478 | 7.56e-129 | 382 |
| MS.gene59963.t1 | AT2G26000 | 39.056 | 466 | 245 | 10 | 27 | 480 | 22 | 460 | 1.47e-115 | 348 |
Find 103 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTGCGTTCTGTGAATTT+AGG | 0.150005 | 8.3:+12383804 | None:intergenic |
| GGTGAGAGAGAATTGGAATT+AGG | 0.180412 | 8.3:+12383741 | None:intergenic |
| CTCTGCGTTCTGTGAATTTA+GGG | 0.219295 | 8.3:+12383805 | None:intergenic |
| AAACTTCTTGCCATTGAAAT+AGG | 0.232877 | 8.3:+12383448 | None:intergenic |
| AGTGAAGATTTAGAAGTTAA+TGG | 0.246664 | 8.3:-12380796 | MS.gene59963:CDS |
| GTGCGTATTCCACTTGTATC+AGG | 0.257066 | 8.3:+12382521 | None:intergenic |
| GTGAGAGAGAATTGGAATTA+GGG | 0.271739 | 8.3:+12383742 | None:intergenic |
| GTGGAGAAGGCTGCAACTTC+TGG | 0.280137 | 8.3:-12379775 | MS.gene59963:CDS |
| GAATGAGAGGGTCCTTGATT+TGG | 0.301939 | 8.3:-12379389 | MS.gene59963:CDS |
| CATTCTGCCCTTAGGTTAAT+CGG | 0.302536 | 8.3:-12379634 | MS.gene59963:intron |
| GTGAAGATTTAGAAGTTAAT+GGG | 0.313739 | 8.3:-12380795 | MS.gene59963:CDS |
| TCATCGAAGGAGAAATAATT+AGG | 0.314747 | 8.3:+12383696 | None:intergenic |
| CATCCTGTTGTTGACATAAT+CGG | 0.338420 | 8.3:+12381271 | None:intergenic |
| GAGAAGAGGTGAGAGAGAAT+TGG | 0.361552 | 8.3:+12383734 | None:intergenic |
| GTCAGACTCAAATGGAATAA+AGG | 0.364370 | 8.3:-12379223 | MS.gene59963:CDS |
| TTATGTCCATCGACTGAATC+AGG | 0.387311 | 8.3:-12380902 | MS.gene59963:CDS |
| ACAACAAATTTGGGATTATG+TGG | 0.392975 | 8.3:-12380932 | MS.gene59963:CDS |
| TTCATCATCTTCTCTTCATC+AGG | 0.396642 | 8.3:-12383635 | MS.gene59963:intron |
| ACCAACATGTCCAGTTTGCT+TGG | 0.402731 | 8.3:-12382706 | MS.gene59963:CDS |
| CCGTCTTCTTACATCTCAAT+TGG | 0.403056 | 8.3:-12380182 | MS.gene59963:CDS |
| GTCTGGGTTTGTATGATTTG+TGG | 0.411595 | 8.3:-12381210 | MS.gene59963:CDS |
| GTGGAACATTAGATGATGTC+TGG | 0.413609 | 8.3:-12381227 | MS.gene59963:CDS |
| ACTTCTTGCCTCAATTAGTA+AGG | 0.414456 | 8.3:+12379825 | None:intergenic |
| TGAAACTCACCCAAGCAAAC+TGG | 0.414850 | 8.3:+12382696 | None:intergenic |
| GGTCCTTGATTTGGAGGAAC+AGG | 0.415267 | 8.3:-12379380 | MS.gene59963:intron |
| TTCAACTTTGCTGTTAAAGA+AGG | 0.416559 | 8.3:+12380771 | None:intergenic |
| GCATTTCATACCTATTTCAA+TGG | 0.416711 | 8.3:-12383458 | MS.gene59963:CDS |
| TGTTTGAATCCCAGAGAGAC+TGG | 0.421884 | 8.3:-12382546 | MS.gene59963:intron |
| TTCTTGCTGTTTCCAGGAGA+AGG | 0.425015 | 8.3:+12379168 | None:intergenic |
| GCTCATGAGCAACCTTCTCC+TGG | 0.443145 | 8.3:-12379180 | MS.gene59963:CDS |
| GTTCACTGTATGTCTCTAGA+AGG | 0.443877 | 8.3:-12380841 | MS.gene59963:CDS |
| GGAGCGGAGAAGATGAGTTC+GGG | 0.448861 | 8.3:+12383846 | None:intergenic |
| GAGAGGAGTGTGAAGCGCTT+CGG | 0.450487 | 8.3:+12383766 | None:intergenic |
| GGCTGCAACTTCTGGCATGC+TGG | 0.450669 | 8.3:-12379767 | MS.gene59963:CDS |
| TGGAGCGGAGAAGATGAGTT+CGG | 0.454323 | 8.3:+12383845 | None:intergenic |
| GATGAAGACGATCAAGATAG+TGG | 0.455616 | 8.3:+12383652 | None:intergenic |
| AGAATTGGAATTAGGGAGAG+AGG | 0.456750 | 8.3:+12383749 | None:intergenic |
| GATAAAATGTCAGACTCAAA+TGG | 0.459339 | 8.3:-12379231 | MS.gene59963:CDS |
| GGAACGATGGGATGGAAGAT+AGG | 0.463072 | 8.3:-12383523 | MS.gene59963:CDS |
| CGTCGTCGACTGAGTGGACT+CGG | 0.465807 | 8.3:+12383883 | None:intergenic |
| TCTCCTTCGATGATTTCATT+CGG | 0.467942 | 8.3:-12383686 | MS.gene59963:CDS |
| CTGCCGATTATGTCAACAAC+AGG | 0.469592 | 8.3:-12381274 | MS.gene59963:CDS |
| TTATGAATCCTTACTAATTG+AGG | 0.471285 | 8.3:-12379833 | MS.gene59963:CDS |
| TCGGAATGTGAAGAAGTTGC+TGG | 0.471476 | 8.3:-12382756 | MS.gene59963:CDS |
| TTTGATTTGGTAGGAACGAT+GGG | 0.480219 | 8.3:-12383535 | MS.gene59963:intron |
| TGTATGATTTGTGGATTTGT+CGG | 0.483896 | 8.3:-12381201 | MS.gene59963:CDS |
| GTGGACATATTTGTCTTGCC+AGG | 0.485200 | 8.3:-12382456 | MS.gene59963:intron |
| TGAGAGGGTCCTTGATTTGG+AGG | 0.485934 | 8.3:-12379386 | MS.gene59963:CDS |
| CCGTTATTACTTACCTCAGC+AGG | 0.492902 | 8.3:+12383422 | None:intergenic |
| ATTTGTGGATTTGTCGGATG+TGG | 0.494341 | 8.3:-12381195 | MS.gene59963:CDS |
| CCAACATGTCCAGTTTGCTT+GGG | 0.495855 | 8.3:-12382705 | MS.gene59963:intron |
| GTTGCTGGGACTCCTCCAGC+TGG | 0.513889 | 8.3:-12382741 | MS.gene59963:CDS |
| CTTCTCCACTGCTTCAGATA+CGG | 0.513939 | 8.3:+12379789 | None:intergenic |
| CAGGATCAATCTAGAATTGA+CGG | 0.519347 | 8.3:-12380883 | MS.gene59963:CDS |
| TTCACTGTATGTCTCTAGAA+GGG | 0.522047 | 8.3:-12380840 | MS.gene59963:CDS |
| TTTGCTTTCCGTGGAATACT+CGG | 0.522856 | 8.3:-12382775 | MS.gene59963:CDS |
| TGCGTATTCCACTTGTATCA+GGG | 0.527421 | 8.3:+12382522 | None:intergenic |
| GTTCCACAAATAAAACAAGT+TGG | 0.529607 | 8.3:+12381243 | None:intergenic |
| CGCAAGGGCATTGAAATGAA+TGG | 0.532039 | 8.3:+12382486 | None:intergenic |
| GGTATTTCTGTACAACCAGC+TGG | 0.536457 | 8.3:+12382726 | None:intergenic |
| AAGGACATGCTATTCAGCAT+TGG | 0.544403 | 8.3:-12380993 | MS.gene59963:CDS |
| ATTGATCCTGATTCAGTCGA+TGG | 0.544517 | 8.3:+12380896 | None:intergenic |
| ATACCTGTTCCTCCAAATCA+AGG | 0.546149 | 8.3:+12379377 | None:intergenic |
| ATGAAGACGATCAAGATAGT+GGG | 0.546605 | 8.3:+12383653 | None:intergenic |
| CTTTAACAGCAAAGTTGAAG+CGG | 0.546937 | 8.3:-12380767 | MS.gene59963:intron |
| ATTTGGTAGGAACGATGGGA+TGG | 0.551457 | 8.3:-12383531 | MS.gene59963:intron |
| TGGAACATTAGATGATGTCT+GGG | 0.559204 | 8.3:-12381226 | MS.gene59963:CDS |
| TTCACATTCCGAGTATTCCA+CGG | 0.559393 | 8.3:+12382767 | None:intergenic |
| CGTATCTGAAGCAGTGGAGA+AGG | 0.559498 | 8.3:-12379788 | MS.gene59963:CDS |
| AGATTAAAGAAGCAGAAGAG+AGG | 0.561135 | 8.3:-12379577 | MS.gene59963:intron |
| CAACAAATTTGGGATTATGT+GGG | 0.563048 | 8.3:-12380931 | MS.gene59963:CDS |
| GAAGGTTGCTCATGAGCCAC+TGG | 0.563743 | 8.3:+12379186 | None:intergenic |
| CGGAATGTGAAGAAGTTGCT+GGG | 0.571574 | 8.3:-12382755 | MS.gene59963:CDS |
| TTCTTGGGATTGGGTTGGAG+CGG | 0.574169 | 8.3:+12383830 | None:intergenic |
| AATGCCCTTGCGTCTCAAAG+TGG | 0.575637 | 8.3:-12382475 | MS.gene59963:CDS |
| GATTCTCGTCGTCGACTGAG+TGG | 0.577788 | 8.3:+12383877 | None:intergenic |
| CATTGAAGTCGATGAATGAG+AGG | 0.577929 | 8.3:-12379402 | MS.gene59963:CDS |
| TAGAATTGACGGCAAGTCGA+AGG | 0.578499 | 8.3:-12380872 | MS.gene59963:CDS |
| TATGTCCACTTTGAGACGCA+AGG | 0.588521 | 8.3:+12382470 | None:intergenic |
| AGAAAGAAATGTTGTTGCTG+AGG | 0.588529 | 8.3:-12379713 | MS.gene59963:intron |
| AAGATGAGTTCGGGATCGAG+TGG | 0.588594 | 8.3:+12383855 | None:intergenic |
| AGACTCAAATGGAATAAAGG+AGG | 0.592588 | 8.3:-12379220 | MS.gene59963:CDS |
| GTGGATTTGTCGGATGTGGA+AGG | 0.595592 | 8.3:-12381191 | MS.gene59963:intron |
| CCCAAGCAAACTGGACATGT+TGG | 0.601547 | 8.3:+12382705 | None:intergenic |
| AAGCTCCGTATCTGAAGCAG+TGG | 0.608444 | 8.3:-12379794 | MS.gene59963:CDS |
| ATGTCCACTTTGAGACGCAA+GGG | 0.620907 | 8.3:+12382471 | None:intergenic |
| GACTCAAATGGAATAAAGGA+GGG | 0.622185 | 8.3:-12379219 | MS.gene59963:CDS |
| GTGGACTCGGAGGAAGAACA+TGG | 0.623052 | 8.3:+12383896 | None:intergenic |
| ACAGCGAGGATGAAGAGAAG+AGG | 0.623767 | 8.3:+12383720 | None:intergenic |
| TGAAGATTTAGAAGTTAATG+GGG | 0.626069 | 8.3:-12380794 | MS.gene59963:CDS |
| TCACTGTATGTCTCTAGAAG+GGG | 0.634476 | 8.3:-12380839 | MS.gene59963:CDS |
| CCAATTGAGATGTAAGAAGA+CGG | 0.636618 | 8.3:+12380182 | None:intergenic |
| AAACCGAATGAAATCATCGA+AGG | 0.643428 | 8.3:+12383683 | None:intergenic |
| AAAACAGAAAGTCTGGTCGA+AGG | 0.644959 | 8.3:-12379146 | MS.gene59963:CDS |
| ACAGAAAGTCTGGTCGAAGG+CGG | 0.651997 | 8.3:-12379143 | MS.gene59963:CDS |
| ATTGAAGTCGATGAATGAGA+GGG | 0.674240 | 8.3:-12379401 | MS.gene59963:CDS |
| CCTAAATTCACAGAACGCAG+AGG | 0.674835 | 8.3:-12383804 | MS.gene59963:CDS |
| AGACTGGACCCTGATACAAG+TGG | 0.679214 | 8.3:-12382530 | MS.gene59963:CDS |
| TGAAGACGATCAAGATAGTG+GGG | 0.690985 | 8.3:+12383654 | None:intergenic |
| ATTTCTGTACAACCAGCTGG+AGG | 0.702761 | 8.3:+12382729 | None:intergenic |
| AGAAATAATTAGGAACAGCG+AGG | 0.702814 | 8.3:+12383706 | None:intergenic |
| GGAGGGAACAGTCTTACCAG+TGG | 0.721862 | 8.3:-12379202 | MS.gene59963:CDS |
| CGTCGACTGAGTGGACTCGG+AGG | 0.727644 | 8.3:+12383886 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAAAATCAACAATTA+GGG | + | chr8.3:12379479-12379498 | None:intergenic | 10.0% |
| !! | ATAATTATGAAATATTATCT+TGG | - | chr8.3:12380912-12380931 | MS.gene59963:CDS | 10.0% |
| !! | TAATTATGAAATATTATCTT+GGG | - | chr8.3:12380913-12380932 | MS.gene59963:CDS | 10.0% |
| !! | TATATAAATGACAATAAAAT+GGG | + | chr8.3:12381950-12381969 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTCTAAAAAACA+AGG | - | chr8.3:12381494-12381513 | MS.gene59963:intron | 10.0% |
| !! | ATAAATTTAAAAAACGACAA+AGG | + | chr8.3:12380155-12380174 | None:intergenic | 15.0% |
| !! | CAAAATTAAAATCAACAATT+AGG | + | chr8.3:12379480-12379499 | None:intergenic | 15.0% |
| !! | CAAGTAAATAGTATTAATAA+GGG | - | chr8.3:12380005-12380024 | MS.gene59963:intron | 15.0% |
| !! | CATATAGTTATTCTATAAAT+GGG | - | chr8.3:12382647-12382666 | MS.gene59963:intron | 15.0% |
| !! | CATTTATAGAATAACTATAT+GGG | + | chr8.3:12382648-12382667 | None:intergenic | 15.0% |
| !! | CCAACTTAAATTAATAATTA+GGG | + | chr8.3:12381448-12381467 | None:intergenic | 15.0% |
| !! | CTATATAAATGACAATAAAA+TGG | + | chr8.3:12381951-12381970 | None:intergenic | 15.0% |
| !! | TATTATTACACTTTAATCTT+TGG | - | chr8.3:12380636-12380655 | MS.gene59963:intron | 15.0% |
| !! | TCAAATAAGTTAATTCAAAT+AGG | - | chr8.3:12379877-12379896 | MS.gene59963:intron | 15.0% |
| !! | TCAAGTAAATAGTATTAATA+AGG | - | chr8.3:12380004-12380023 | MS.gene59963:intron | 15.0% |
| !! | TCATAATACTAAAACAAAAA+TGG | + | chr8.3:12383184-12383203 | None:intergenic | 15.0% |
| !! | TTTAAATATGTGATCATTTA+GGG | - | chr8.3:12383597-12383616 | MS.gene59963:intron | 15.0% |
| !! | TTTGTTTAACATATTAAGTA+GGG | + | chr8.3:12381922-12381941 | None:intergenic | 15.0% |
| !!! | AAGTATGTCTAAATAAATTT+TGG | + | chr8.3:12381207-12381226 | None:intergenic | 15.0% |
| !!! | ACTTTTTTTTTCTTTTTCAA+GGG | + | chr8.3:12379749-12379768 | None:intergenic | 15.0% |
| !!! | AGTAAAGTTGTTTTTTTTTT+TGG | - | chr8.3:12383545-12383564 | MS.gene59963:intron | 15.0% |
| !!! | ATTATAATGTTAACTTGTTA+AGG | + | chr8.3:12382370-12382389 | None:intergenic | 15.0% |
| !!! | CATTTTATTGTCATTTATAT+AGG | - | chr8.3:12381949-12381968 | MS.gene59963:intron | 15.0% |
| !!! | CCTAATTATTAATTTAAGTT+GGG | - | chr8.3:12381446-12381465 | MS.gene59963:intron | 15.0% |
| !!! | TGTTGATTTTAATTTTGATT+TGG | - | chr8.3:12379483-12379502 | MS.gene59963:intron | 15.0% |
| !!! | TTGTCGTTTTTTAAATTTAT+TGG | - | chr8.3:12380155-12380174 | MS.gene59963:intron | 15.0% |
| !!! | TTTTAATCTAGATATAAAGA+AGG | - | chr8.3:12382019-12382038 | MS.gene59963:intron | 15.0% |
| !!! | TTTTGTTTAACATATTAAGT+AGG | + | chr8.3:12381923-12381942 | None:intergenic | 15.0% |
| !! | AATAGGACTTAAGTAAAAAT+AGG | - | chr8.3:12379894-12379913 | MS.gene59963:intron | 20.0% |
| !! | ACTTATGATGTTTATATTGT+AGG | - | chr8.3:12381733-12381752 | MS.gene59963:intron | 20.0% |
| !! | CCATATAGTTATTCTATAAA+TGG | - | chr8.3:12382646-12382665 | MS.gene59963:intron | 20.0% |
| !! | CCATTTATAGAATAACTATA+TGG | + | chr8.3:12382649-12382668 | None:intergenic | 20.0% |
| !! | CCCAACTTAAATTAATAATT+AGG | + | chr8.3:12381449-12381468 | None:intergenic | 20.0% |
| !! | CCCTAATTATTAATTTAAGT+TGG | - | chr8.3:12381445-12381464 | MS.gene59963:intron | 20.0% |
| !! | GTTTAAATATGTGATCATTT+AGG | - | chr8.3:12383596-12383615 | MS.gene59963:intron | 20.0% |
| !! | TCATTAAAAATTCAGAAATG+TGG | - | chr8.3:12383424-12383443 | MS.gene59963:intron | 20.0% |
| !! | TGAAATGAAGCTTATATTTA+GGG | - | chr8.3:12380056-12380075 | MS.gene59963:intron | 20.0% |
| !! | TGGAAATATTATTGTATTGA+TGG | - | chr8.3:12381692-12381711 | MS.gene59963:intron | 20.0% |
| !! | TTAAACATGTAATGAGAATA+TGG | + | chr8.3:12383582-12383601 | None:intergenic | 20.0% |
| !! | TTCAAAAAAGACTTGTATTT+AGG | - | chr8.3:12380090-12380109 | MS.gene59963:intron | 20.0% |
| !! | TTGAAATGAAGCTTATATTT+AGG | - | chr8.3:12380055-12380074 | MS.gene59963:intron | 20.0% |
| !! | TTTATCTTTATACAAGAGTT+TGG | + | chr8.3:12381067-12381086 | None:intergenic | 20.0% |
| !!! | AAGGTATTAATTGATTATTG+AGG | + | chr8.3:12380136-12380155 | None:intergenic | 20.0% |
| !!! | ACTAAATGGATTTTAATATC+TGG | + | chr8.3:12381416-12381435 | None:intergenic | 20.0% |
| !!! | ATTACAGAACTTTTTCAAAA+TGG | + | chr8.3:12379439-12379458 | None:intergenic | 20.0% |
| !!! | ATTTTAGAACACAACAAATT+TGG | - | chr8.3:12382089-12382108 | MS.gene59963:intron | 20.0% |
| !!! | ATTTTATGCTGATACTAATT+TGG | - | chr8.3:12382499-12382518 | MS.gene59963:CDS | 20.0% |
| !!! | ATTTTCTAAAAAACAAGGAA+GGG | - | chr8.3:12381499-12381518 | MS.gene59963:intron | 20.0% |
| !!! | GACTTTTTTTTTCTTTTTCA+AGG | + | chr8.3:12379750-12379769 | None:intergenic | 20.0% |
| !!! | GAGAATATCATAATTTTGTT+TGG | - | chr8.3:12380943-12380962 | MS.gene59963:CDS | 20.0% |
| !!! | GATTTTAATTTTGATTTGGT+AGG | - | chr8.3:12379487-12379506 | MS.gene59963:intron | 20.0% |
| !!! | TATTTTCTAAAAAACAAGGA+AGG | - | chr8.3:12381498-12381517 | MS.gene59963:intron | 20.0% |
| !!! | TTAATGTGTTATTTTGTGTA+TGG | - | chr8.3:12379925-12379944 | MS.gene59963:intron | 20.0% |
| !!! | TTTTAGAACACAACAAATTT+GGG | - | chr8.3:12382090-12382109 | MS.gene59963:intron | 20.0% |
| !!! | TTTTATGCTGATACTAATTT+GGG | - | chr8.3:12382500-12382519 | MS.gene59963:CDS | 20.0% |
| ! | AAAGAGAGATATACGTAATA+AGG | + | chr8.3:12380185-12380204 | None:intergenic | 25.0% |
| ! | AAAGATAAAAGATGCAACAT+GGG | - | chr8.3:12381078-12381097 | MS.gene59963:intron | 25.0% |
| ! | AAGTGATGTAATTTATAGTG+TGG | - | chr8.3:12383032-12383051 | MS.gene59963:intron | 25.0% |
| ! | ACATGACAAGTACAAATTTA+TGG | + | chr8.3:12379645-12379664 | None:intergenic | 25.0% |
| ! | ACTTATTTGAGCTTATTTAC+TGG | + | chr8.3:12379867-12379886 | None:intergenic | 25.0% |
| ! | AGTGAAAAAAATTTCAAGGA+TGG | + | chr8.3:12382903-12382922 | None:intergenic | 25.0% |
| ! | AGTGAAGATTTAGAAGTTAA+TGG | - | chr8.3:12382235-12382254 | MS.gene59963:intron | 25.0% |
| ! | ATTACACTTTAATCTTTGGT+TGG | - | chr8.3:12380640-12380659 | MS.gene59963:intron | 25.0% |
| ! | ATTGGAAAACTTCTATACAA+AGG | + | chr8.3:12383699-12383718 | None:intergenic | 25.0% |
| ! | CGGAAAGCAAAAATAAAATA+TGG | + | chr8.3:12380247-12380266 | None:intergenic | 25.0% |
| ! | GTAAACATTAAACTCTATTC+AGG | - | chr8.3:12382942-12382961 | MS.gene59963:intron | 25.0% |
| ! | GTGAAGATTTAGAAGTTAAT+GGG | - | chr8.3:12382236-12382255 | MS.gene59963:intron | 25.0% |
| ! | GTGTAATAATATGTCAAAAC+AGG | + | chr8.3:12380627-12380646 | None:intergenic | 25.0% |
| ! | TAAAGATAAAAGATGCAACA+TGG | - | chr8.3:12381077-12381096 | MS.gene59963:intron | 25.0% |
| ! | TAACTTCATTCCAAACAAAT+TGG | + | chr8.3:12383503-12383522 | None:intergenic | 25.0% |
| ! | TCAAATGATGATCAAAATGT+AGG | - | chr8.3:12380211-12380230 | MS.gene59963:intron | 25.0% |
| ! | TCTATACAAAGGATTAATGA+AGG | + | chr8.3:12383688-12383707 | None:intergenic | 25.0% |
| ! | TGAAGATTTAGAAGTTAATG+GGG | - | chr8.3:12382237-12382256 | MS.gene59963:intron | 25.0% |
| ! | TTATGAATCCTTACTAATTG+AGG | - | chr8.3:12383198-12383217 | MS.gene59963:intron | 25.0% |
| !! | ACCTTAACAAGTTTTTAACA+AGG | - | chr8.3:12382340-12382359 | MS.gene59963:intron | 25.0% |
| !! | CAATTTTATTGTTCTCTGAT+GGG | - | chr8.3:12383715-12383734 | MS.gene59963:CDS | 25.0% |
| !!! | ATAGGTATAGTGTTTTGATT+AGG | - | chr8.3:12379526-12379545 | MS.gene59963:intron | 25.0% |
| !!! | ATCAGTTCTTTAATTTTCGT+TGG | - | chr8.3:12381875-12381894 | MS.gene59963:intron | 25.0% |
| !!! | CTTGAAATTTTTTTCACTGT+GGG | - | chr8.3:12382905-12382924 | MS.gene59963:intron | 25.0% |
| !!! | GTTTTTTGTATAAGCTATCT+TGG | - | chr8.3:12379775-12379794 | MS.gene59963:CDS | 25.0% |
| !!! | TACACTTTTCTAGTTCATTT+TGG | + | chr8.3:12383294-12383313 | None:intergenic | 25.0% |
| !!! | TATTTGCTTTTGTTTTGTCA+GGG | - | chr8.3:12381973-12381992 | MS.gene59963:intron | 25.0% |
| !!! | TATTTTATTTTTGCTTTCCG+TGG | - | chr8.3:12380247-12380266 | MS.gene59963:intron | 25.0% |
| !!! | TTATTTGCTTTTGTTTTGTC+AGG | - | chr8.3:12381972-12381991 | MS.gene59963:intron | 25.0% |
| !!! | TTGAAATTTTTTTCACTGTG+GGG | - | chr8.3:12382906-12382925 | MS.gene59963:intron | 25.0% |
| AAACACTTATGAGACTGTTT+GGG | + | chr8.3:12379841-12379860 | None:intergenic | 30.0% | |
| AAACTTCTTGCCATTGAAAT+AGG | + | chr8.3:12379586-12379605 | None:intergenic | 30.0% | |
| AAGAGTTATATTGCCTAACT+AGG | - | chr8.3:12380757-12380776 | MS.gene59963:intron | 30.0% | |
| AGCAAGCAATAAGGAAATAT+AGG | + | chr8.3:12383354-12383373 | None:intergenic | 30.0% | |
| CATATAGATGTGTTCAATTC+TGG | - | chr8.3:12379970-12379989 | MS.gene59963:intron | 30.0% | |
| CCAAAGTTTAAGAACGTATT+TGG | - | chr8.3:12380871-12380890 | MS.gene59963:CDS | 30.0% | |
| CCAAATACGTTCTTAAACTT+TGG | + | chr8.3:12380874-12380893 | None:intergenic | 30.0% | |
| CCACAGTGAAAAAAATTTCA+AGG | + | chr8.3:12382907-12382926 | None:intergenic | 30.0% | |
| CCATCAGAGAACAATAAAAT+TGG | + | chr8.3:12383717-12383736 | None:intergenic | 30.0% | |
| GACATACTTCACTTATTGTT+CGG | - | chr8.3:12381218-12381237 | MS.gene59963:CDS | 30.0% | |
| GATAAAATGTCAGACTCAAA+TGG | - | chr8.3:12383800-12383819 | MS.gene59963:CDS | 30.0% | |
| GATGTGTAAACATTGTTTCA+TGG | - | chr8.3:12382700-12382719 | MS.gene59963:intron | 30.0% | |
| GCATGTGAAAGAAAAATCAT+CGG | + | chr8.3:12382780-12382799 | None:intergenic | 30.0% | |
| GCATTTCATACCTATTTCAA+TGG | - | chr8.3:12379573-12379592 | MS.gene59963:intron | 30.0% | |
| GTTCCACAAATAAAACAAGT+TGG | + | chr8.3:12381791-12381810 | None:intergenic | 30.0% | |
| GTTTCTTTCACTTATGATGA+AGG | - | chr8.3:12383068-12383087 | MS.gene59963:intron | 30.0% | |
| TAAACACTTATGAGACTGTT+TGG | + | chr8.3:12379842-12379861 | None:intergenic | 30.0% | |
| TAGGGAGAAAATACACTAAA+TGG | + | chr8.3:12381430-12381449 | None:intergenic | 30.0% | |
| TCATCGAAGGAGAAATAATT+AGG | + | chr8.3:12379338-12379357 | None:intergenic | 30.0% | |
| TGAACACATCTATATGCAAA+AGG | + | chr8.3:12379966-12379985 | None:intergenic | 30.0% | |
| ! | AAAACAGGTTTTCATGGAAT+GGG | + | chr8.3:12380612-12380631 | None:intergenic | 30.0% |
| ! | AAACAAATTGGTAGCTTAAG+TGG | + | chr8.3:12383491-12383510 | None:intergenic | 30.0% |
| ! | ACAACAAATTTGGGATTATG+TGG | - | chr8.3:12382099-12382118 | MS.gene59963:intron | 30.0% |
| ! | ACTTAAGCTACCAATTTGTT+TGG | - | chr8.3:12383490-12383509 | MS.gene59963:CDS | 30.0% |
| ! | CAACAAATTTGGGATTATGT+GGG | - | chr8.3:12382100-12382119 | MS.gene59963:intron | 30.0% |
| ! | CCAATTTTATTGTTCTCTGA+TGG | - | chr8.3:12383714-12383733 | MS.gene59963:CDS | 30.0% |
| ! | CTAGGTTGGAAAAAATTGAT+AGG | + | chr8.3:12381122-12381141 | None:intergenic | 30.0% |
| ! | CTCTGTCACTGATTAATTAA+TGG | - | chr8.3:12382799-12382818 | MS.gene59963:CDS | 30.0% |
| ! | TATGTCAAAACAGGTTTTCA+TGG | + | chr8.3:12380618-12380637 | None:intergenic | 30.0% |
| ! | TGTATGATTTGTGGATTTGT+CGG | - | chr8.3:12381830-12381849 | MS.gene59963:intron | 30.0% |
| !! | GCCTTGTTAAAAACTTGTTA+AGG | + | chr8.3:12382344-12382363 | None:intergenic | 30.0% |
| !! | TGTGAATTTAGGGTTTTCTT+GGG | + | chr8.3:12379219-12379238 | None:intergenic | 30.0% |
| !! | TGTTTGCTGTGTAATTAACA+CGG | - | chr8.3:12382567-12382586 | MS.gene59963:intron | 30.0% |
| !! | TTCAACTTTGCTGTTAAAGA+AGG | + | chr8.3:12382263-12382282 | None:intergenic | 30.0% |
| !!! | AACAAAAGCACTGGTTTTAT+TGG | - | chr8.3:12381660-12381679 | MS.gene59963:intron | 30.0% |
| !!! | AAGCCAACTTGTTTTATTTG+TGG | - | chr8.3:12381785-12381804 | MS.gene59963:intron | 30.0% |
| !!! | CCTTGAAATTTTTTTCACTG+TGG | - | chr8.3:12382904-12382923 | MS.gene59963:intron | 30.0% |
| !!! | CTATCAATTTTTTCCAACCT+AGG | - | chr8.3:12381120-12381139 | MS.gene59963:intron | 30.0% |
| AAACCGAATGAAATCATCGA+AGG | + | chr8.3:12379351-12379370 | None:intergenic | 35.0% | |
| AACGAGTTTGAAAGTTTCTC+AGG | - | chr8.3:12380827-12380846 | MS.gene59963:CDS | 35.0% | |
| AAGCTATCTTGGACATCTTA+TGG | - | chr8.3:12379786-12379805 | MS.gene59963:CDS | 35.0% | |
| AAGGTAACAACTTCAACACA+TGG | - | chr8.3:12381370-12381389 | MS.gene59963:intron | 35.0% | |
| AATTGCTATGATACTCGCAA+TGG | - | chr8.3:12383100-12383119 | MS.gene59963:intron | 35.0% | |
| ACAACCAAATGTGTGACATT+AGG | + | chr8.3:12382726-12382745 | None:intergenic | 35.0% | |
| ACCTTTATACCATCCACTTT+GGG | + | chr8.3:12381003-12381022 | None:intergenic | 35.0% | |
| ACTTCTTGCCTCAATTAGTA+AGG | + | chr8.3:12383209-12383228 | None:intergenic | 35.0% | |
| AGAAAGAAATGTTGTTGCTG+AGG | - | chr8.3:12383318-12383337 | MS.gene59963:intron | 35.0% | |
| AGAAATAATTAGGAACAGCG+AGG | + | chr8.3:12379328-12379347 | None:intergenic | 35.0% | |
| AGACTCAAATGGAATAAAGG+AGG | - | chr8.3:12383811-12383830 | MS.gene59963:CDS | 35.0% | |
| AGATTAAAGAAGCAGAAGAG+AGG | - | chr8.3:12383454-12383473 | MS.gene59963:CDS | 35.0% | |
| AGCAAACAAAATCATACCAC+AGG | + | chr8.3:12382555-12382574 | None:intergenic | 35.0% | |
| AGCAAGAAAAACAGAAAGTC+TGG | - | chr8.3:12383878-12383897 | MS.gene59963:CDS | 35.0% | |
| ATACTTCACTTATTGTTCGG+AGG | - | chr8.3:12381221-12381240 | MS.gene59963:CDS | 35.0% | |
| ATGAAGACGATCAAGATAGT+GGG | + | chr8.3:12379381-12379400 | None:intergenic | 35.0% | |
| ATGAGCTTAATATCCTAGGT+TGG | + | chr8.3:12381136-12381155 | None:intergenic | 35.0% | |
| ATGATTCTTCATGAGAAGCT+TGG | - | chr8.3:12380710-12380729 | MS.gene59963:intron | 35.0% | |
| ATTGAAGTCGATGAATGAGA+GGG | - | chr8.3:12383630-12383649 | MS.gene59963:intron | 35.0% | |
| ATTGCTATGATACTCGCAAT+GGG | - | chr8.3:12383101-12383120 | MS.gene59963:intron | 35.0% | |
| CAGAGTTAAAGCAAGCAATA+AGG | + | chr8.3:12383363-12383382 | None:intergenic | 35.0% | |
| CATCCTGTTGTTGACATAAT+CGG | + | chr8.3:12381763-12381782 | None:intergenic | 35.0% | |
| CCAATTGAGATGTAAGAAGA+CGG | + | chr8.3:12382852-12382871 | None:intergenic | 35.0% | |
| CCAGAATGCATTGAATTTCT+GGG | - | chr8.3:12381268-12381287 | MS.gene59963:CDS | 35.0% | |
| CTAACTAGGATATTATCGTG+AGG | - | chr8.3:12380771-12380790 | MS.gene59963:CDS | 35.0% | |
| CTAGTTTCTTGAATGTCAAC+TGG | - | chr8.3:12383009-12383028 | MS.gene59963:intron | 35.0% | |
| CTCACGATAATATCCTAGTT+AGG | + | chr8.3:12380773-12380792 | None:intergenic | 35.0% | |
| CTTTAACAGCAAAGTTGAAG+CGG | - | chr8.3:12382264-12382283 | MS.gene59963:intron | 35.0% | |
| GACTCAAATGGAATAAAGGA+GGG | - | chr8.3:12383812-12383831 | MS.gene59963:CDS | 35.0% | |
| GTCAGACTCAAATGGAATAA+AGG | - | chr8.3:12383808-12383827 | MS.gene59963:CDS | 35.0% | |
| GTGAGAGAGAATTGGAATTA+GGG | + | chr8.3:12379292-12379311 | None:intergenic | 35.0% | |
| TACCTTTATACCATCCACTT+TGG | + | chr8.3:12381004-12381023 | None:intergenic | 35.0% | |
| TCACTTATGATGAAGGCTTT+GGG | - | chr8.3:12383075-12383094 | MS.gene59963:intron | 35.0% | |
| TCTCCTTCGATGATTTCATT+CGG | - | chr8.3:12379345-12379364 | MS.gene59963:intron | 35.0% | |
| TGAGGTGATTATGATTGTGT+GGG | - | chr8.3:12380428-12380447 | MS.gene59963:intron | 35.0% | |
| TGGAACATTAGATGATGTCT+GGG | - | chr8.3:12381805-12381824 | MS.gene59963:intron | 35.0% | |
| TGGAATGTGCAATGATAAGT+TGG | + | chr8.3:12381396-12381415 | None:intergenic | 35.0% | |
| TGTCATGTAGACATAGAGAT+AGG | - | chr8.3:12382622-12382641 | MS.gene59963:intron | 35.0% | |
| TTCACTTATGATGAAGGCTT+TGG | - | chr8.3:12383074-12383093 | MS.gene59963:intron | 35.0% | |
| TTCATCATCTTCTCTTCATC+AGG | - | chr8.3:12379396-12379415 | MS.gene59963:CDS | 35.0% | |
| ! | AAACAGGTTTTCATGGAATG+GGG | + | chr8.3:12380611-12380630 | None:intergenic | 35.0% |
| ! | AATGCATTGAATTTCTGGGA+AGG | - | chr8.3:12381272-12381291 | MS.gene59963:CDS | 35.0% |
| ! | ATTAGACTCTTAGAGCATCA+TGG | - | chr8.3:12380670-12380689 | MS.gene59963:intron | 35.0% |
| ! | CAAAACAGGTTTTCATGGAA+TGG | + | chr8.3:12380613-12380632 | None:intergenic | 35.0% |
| ! | CAGGATCAATCTAGAATTGA+CGG | - | chr8.3:12382148-12382167 | MS.gene59963:intron | 35.0% |
| ! | GATGATTTCATTCGGTTTTG+TGG | - | chr8.3:12379353-12379372 | MS.gene59963:intron | 35.0% |
| ! | TAATGGACATGAACAGATTG+TGG | - | chr8.3:12382816-12382835 | MS.gene59963:intron | 35.0% |
| ! | TTAGACTCTTAGAGCATCAT+GGG | - | chr8.3:12380671-12380690 | MS.gene59963:intron | 35.0% |
| ! | TTCACTGTATGTCTCTAGAA+GGG | - | chr8.3:12382191-12382210 | MS.gene59963:intron | 35.0% |
| ! | TTCTAAAAAACAAGGAAGGG+CGG | - | chr8.3:12381502-12381521 | MS.gene59963:intron | 35.0% |
| ! | TTTGCTGTGTAATTAACACG+GGG | - | chr8.3:12382569-12382588 | MS.gene59963:intron | 35.0% |
| !! | AAAAAGCTTCTCTGAAATCG+TGG | - | chr8.3:12382301-12382320 | MS.gene59963:intron | 35.0% |
| !! | AGGTAAGTAATAACGGGTTT+GGG | - | chr8.3:12379616-12379635 | MS.gene59963:CDS | 35.0% |
| !! | ATTGTGTGGGTTGATGTTTA+TGG | - | chr8.3:12380441-12380460 | MS.gene59963:intron | 35.0% |
| !! | ATTTAGGGTTTTCTTGGGAT+TGG | + | chr8.3:12379214-12379233 | None:intergenic | 35.0% |
| !! | CAACTTAGTTTGCAGCTTAT+AGG | - | chr8.3:12379695-12379714 | MS.gene59963:intron | 35.0% |
| !! | CTGTGAATTTAGGGTTTTCT+TGG | + | chr8.3:12379220-12379239 | None:intergenic | 35.0% |
| !! | GTTTGCTGTGTAATTAACAC+GGG | - | chr8.3:12382568-12382587 | MS.gene59963:intron | 35.0% |
| !! | TTTAGGGTTTTCTTGGGATT+GGG | + | chr8.3:12379213-12379232 | None:intergenic | 35.0% |
| !! | TTTGATTTGGTAGGAACGAT+GGG | - | chr8.3:12379496-12379515 | MS.gene59963:intron | 35.0% |
| !!! | ACACTTTTTAAGTCCCAAAG+TGG | - | chr8.3:12380987-12381006 | MS.gene59963:CDS | 35.0% |
| !!! | TTTTGATTTGGTAGGAACGA+TGG | - | chr8.3:12379495-12379514 | MS.gene59963:intron | 35.0% |
| !!! | TTTTTAAGTCCCAAAGTGGA+TGG | - | chr8.3:12380991-12381010 | MS.gene59963:CDS | 35.0% |
| AAAACAGAAAGTCTGGTCGA+AGG | - | chr8.3:12383885-12383904 | MS.gene59963:CDS | 40.0% | |
| AAGAAGCAGAAGAGAGGTAA+TGG | - | chr8.3:12383460-12383479 | MS.gene59963:CDS | 40.0% | |
| AAGGACATGCTATTCAGCAT+TGG | - | chr8.3:12382038-12382057 | MS.gene59963:intron | 40.0% | |
| AAGTTGTTACCTTGACCATG+AGG | + | chr8.3:12381363-12381382 | None:intergenic | 40.0% | |
| AGAATTGGAATTAGGGAGAG+AGG | + | chr8.3:12379285-12379304 | None:intergenic | 40.0% | |
| ATACCTGTTCCTCCAAATCA+AGG | + | chr8.3:12383657-12383676 | None:intergenic | 40.0% | |
| ATGAGCTTCCGATTAACCTA+AGG | + | chr8.3:12383408-12383427 | None:intergenic | 40.0% | |
| ATGGCCTAATGTCACACATT+TGG | - | chr8.3:12382719-12382738 | MS.gene59963:CDS | 40.0% | |
| ATTGATCCTGATTCAGTCGA+TGG | + | chr8.3:12382138-12382157 | None:intergenic | 40.0% | |
| ATTTGTGGATTTGTCGGATG+TGG | - | chr8.3:12381836-12381855 | MS.gene59963:intron | 40.0% | |
| CAGGGAAGACTTTAATGCTA+TGG | - | chr8.3:12381991-12382010 | MS.gene59963:intron | 40.0% | |
| CATTCTGCCCTTAGGTTAAT+CGG | - | chr8.3:12383397-12383416 | MS.gene59963:intron | 40.0% | |
| CATTGAAGTCGATGAATGAG+AGG | - | chr8.3:12383629-12383648 | MS.gene59963:intron | 40.0% | |
| CCCAGAAATTCAATGCATTC+TGG | + | chr8.3:12381271-12381290 | None:intergenic | 40.0% | |
| CCGTCTTCTTACATCTCAAT+TGG | - | chr8.3:12382849-12382868 | MS.gene59963:intron | 40.0% | |
| CCTGCTGAGGTAAGTAATAA+CGG | - | chr8.3:12379609-12379628 | MS.gene59963:CDS | 40.0% | |
| CTATGTCTACATGACAGTAC+AGG | + | chr8.3:12382618-12382637 | None:intergenic | 40.0% | |
| CTCTGCGTTCTGTGAATTTA+GGG | + | chr8.3:12379229-12379248 | None:intergenic | 40.0% | |
| CTGAGGTGATTATGATTGTG+TGG | - | chr8.3:12380427-12380446 | MS.gene59963:intron | 40.0% | |
| CTGCTGAGGTAAGTAATAAC+GGG | - | chr8.3:12379610-12379629 | MS.gene59963:CDS | 40.0% | |
| GATGAAGACGATCAAGATAG+TGG | + | chr8.3:12379382-12379401 | None:intergenic | 40.0% | |
| GCCAGAATGCATTGAATTTC+TGG | - | chr8.3:12381267-12381286 | MS.gene59963:CDS | 40.0% | |
| GCTCATGAGCTTAATATCCT+AGG | + | chr8.3:12381140-12381159 | None:intergenic | 40.0% | |
| GGTGAGAGAGAATTGGAATT+AGG | + | chr8.3:12379293-12379312 | None:intergenic | 40.0% | |
| GTCTGGGTTTGTATGATTTG+TGG | - | chr8.3:12381821-12381840 | MS.gene59963:intron | 40.0% | |
| GTGGAACATTAGATGATGTC+TGG | - | chr8.3:12381804-12381823 | MS.gene59963:intron | 40.0% | |
| GTTCACTGTATGTCTCTAGA+AGG | - | chr8.3:12382190-12382209 | MS.gene59963:intron | 40.0% | |
| TCCCAAAGTGGATGGTATAA+AGG | - | chr8.3:12380999-12381018 | MS.gene59963:CDS | 40.0% | |
| TGAAGACGATCAAGATAGTG+GGG | + | chr8.3:12379380-12379399 | None:intergenic | 40.0% | |
| TGAGCTTCCGATTAACCTAA+GGG | + | chr8.3:12383407-12383426 | None:intergenic | 40.0% | |
| TGCGTATTCCACTTGTATCA+GGG | + | chr8.3:12380512-12380531 | None:intergenic | 40.0% | |
| TGTTTACACATCACGTGTGA+CGG | + | chr8.3:12382692-12382711 | None:intergenic | 40.0% | |
| TTCACATTCCGAGTATTCCA+CGG | + | chr8.3:12380267-12380286 | None:intergenic | 40.0% | |
| TTTGCTTTCCGTGGAATACT+CGG | - | chr8.3:12380256-12380275 | MS.gene59963:intron | 40.0% | |
| ! | CTTAGAGCATCATGGGTATT+AGG | - | chr8.3:12380678-12380697 | MS.gene59963:intron | 40.0% |
| ! | TCACTGTATGTCTCTAGAAG+GGG | - | chr8.3:12382192-12382211 | MS.gene59963:intron | 40.0% |
| ! | TCGTGACAAGGTATTCGAAT+TGG | + | chr8.3:12381302-12381321 | None:intergenic | 40.0% |
| ! | TTATGTCCATCGACTGAATC+AGG | - | chr8.3:12382129-12382148 | MS.gene59963:intron | 40.0% |
| ! | TTTCAAGTGAAGTCGTGACA+AGG | + | chr8.3:12381314-12381333 | None:intergenic | 40.0% |
| !! | GAGGTAAGTAATAACGGGTT+TGG | - | chr8.3:12379615-12379634 | MS.gene59963:CDS | 40.0% |
| !! | TCTCTGAAATCGTGGAGTTA+GGG | - | chr8.3:12382309-12382328 | MS.gene59963:intron | 40.0% |
| !! | TTCTCTGAAATCGTGGAGTT+AGG | - | chr8.3:12382308-12382327 | MS.gene59963:intron | 40.0% |
| !!! | CTGTTTTTCTTGCTGTTTCC+AGG | + | chr8.3:12383872-12383891 | None:intergenic | 40.0% |
| !!! | GGTTTTATTGGTAATGCACG+TGG | - | chr8.3:12381672-12381691 | MS.gene59963:intron | 40.0% |
| AAAAGATGCAACATGGGCGA+TGG | - | chr8.3:12381084-12381103 | MS.gene59963:intron | 45.0% | |
| AAAGATGCAACATGGGCGAT+GGG | - | chr8.3:12381085-12381104 | MS.gene59963:intron | 45.0% | |
| AAATCATACCACAGGTGCAC+AGG | + | chr8.3:12382547-12382566 | None:intergenic | 45.0% | |
| ACAAGGAAGGGCGGAAATTA+AGG | - | chr8.3:12381511-12381530 | MS.gene59963:intron | 45.0% | |
| ACATGGGCGATGGGAAAAAA+TGG | - | chr8.3:12381094-12381113 | MS.gene59963:intron | 45.0% | |
| ACCAAGATCCAAGCAAACAG+AGG | + | chr8.3:12380379-12380398 | None:intergenic | 45.0% | |
| AGACACTTCATTCTGCCCTT+AGG | - | chr8.3:12383389-12383408 | MS.gene59963:intron | 45.0% | |
| AGCGACAAGCTCACTTTAAG+TGG | - | chr8.3:12382439-12382458 | MS.gene59963:intron | 45.0% | |
| ATTTCTGTACAACCAGCTGG+AGG | + | chr8.3:12380305-12380324 | None:intergenic | 45.0% | |
| ATTTGGTAGGAACGATGGGA+TGG | - | chr8.3:12379500-12379519 | MS.gene59963:intron | 45.0% | |
| CCAAGATCCAAGCAAACAGA+GGG | + | chr8.3:12380378-12380397 | None:intergenic | 45.0% | |
| CCGTTATTACTTACCTCAGC+AGG | + | chr8.3:12379612-12379631 | None:intergenic | 45.0% | |
| CCTAAATTCACAGAACGCAG+AGG | - | chr8.3:12379227-12379246 | MS.gene59963:CDS | 45.0% | |
| CCTCTGCGTTCTGTGAATTT+AGG | + | chr8.3:12379230-12379249 | None:intergenic | 45.0% | |
| CGCTGTCTTCAATTTCTCTG+AGG | - | chr8.3:12380410-12380429 | MS.gene59963:intron | 45.0% | |
| CGGAATGTGAAGAAGTTGCT+GGG | - | chr8.3:12380276-12380295 | MS.gene59963:intron | 45.0% | |
| CTTCTCCACTGCTTCAGATA+CGG | + | chr8.3:12383245-12383264 | None:intergenic | 45.0% | |
| GAATGAGAGGGTCCTTGATT+TGG | - | chr8.3:12383642-12383661 | MS.gene59963:CDS | 45.0% | |
| GAGAAGAGGTGAGAGAGAAT+TGG | + | chr8.3:12379300-12379319 | None:intergenic | 45.0% | |
| GTGCGTATTCCACTTGTATC+AGG | + | chr8.3:12380513-12380532 | None:intergenic | 45.0% | |
| GTGGACATATTTGTCTTGCC+AGG | - | chr8.3:12380575-12380594 | MS.gene59963:intron | 45.0% | |
| TAGAATTGACGGCAAGTCGA+AGG | - | chr8.3:12382159-12382178 | MS.gene59963:intron | 45.0% | |
| TCGGAATGTGAAGAAGTTGC+TGG | - | chr8.3:12380275-12380294 | MS.gene59963:intron | 45.0% | |
| TGAAACTCACCCAAGCAAAC+TGG | + | chr8.3:12380338-12380357 | None:intergenic | 45.0% | |
| TGTTACCTTGACCATGAGGA+GGG | + | chr8.3:12381359-12381378 | None:intergenic | 45.0% | |
| TGTTTGAATCCCAGAGAGAC+TGG | - | chr8.3:12380485-12380504 | MS.gene59963:intron | 45.0% | |
| TTGAAGCGGTATGTTTCTCG+TGG | - | chr8.3:12382278-12382297 | MS.gene59963:intron | 45.0% | |
| TTGTTACCTTGACCATGAGG+AGG | + | chr8.3:12381360-12381379 | None:intergenic | 45.0% | |
| ! | AACACGGGGCTTTATGCATA+AGG | - | chr8.3:12382583-12382602 | MS.gene59963:intron | 45.0% |
| ! | ACCAACATGTCCAGTTTGCT+TGG | - | chr8.3:12380325-12380344 | MS.gene59963:intron | 45.0% |
| ! | CAAGAAGTTTTCTCCTGCTG+AGG | - | chr8.3:12379596-12379615 | MS.gene59963:CDS | 45.0% |
| ! | CCAACATGTCCAGTTTGCTT+GGG | - | chr8.3:12380326-12380345 | MS.gene59963:intron | 45.0% |
| ! | CTGCCGATTATGTCAACAAC+AGG | - | chr8.3:12381757-12381776 | MS.gene59963:intron | 45.0% |
| ! | GGTATTTCTGTACAACCAGC+TGG | + | chr8.3:12380308-12380327 | None:intergenic | 45.0% |
| ! | TGCTTCGCTAACAAAAGCAC+TGG | - | chr8.3:12381651-12381670 | MS.gene59963:intron | 45.0% |
| !! | ATGTCCACTTTGAGACGCAA+GGG | + | chr8.3:12380563-12380582 | None:intergenic | 45.0% |
| !! | CGCAAGGGCATTGAAATGAA+TGG | + | chr8.3:12380548-12380567 | None:intergenic | 45.0% |
| !! | TATGTCCACTTTGAGACGCA+AGG | + | chr8.3:12380564-12380583 | None:intergenic | 45.0% |
| !! | TTCTTGCTGTTTCCAGGAGA+AGG | + | chr8.3:12383866-12383885 | None:intergenic | 45.0% |
| AACAAAAGCCTGTGCACCTG+TGG | - | chr8.3:12382536-12382555 | MS.gene59963:intron | 50.0% | |
| AAGATGAGTTCGGGATCGAG+TGG | + | chr8.3:12379179-12379198 | None:intergenic | 50.0% | |
| AATGCCCTTGCGTCTCAAAG+TGG | - | chr8.3:12380556-12380575 | MS.gene59963:intron | 50.0% | |
| ACAGAAAGTCTGGTCGAAGG+CGG | - | chr8.3:12383888-12383907 | MS.gene59963:CDS | 50.0% | |
| ACAGCGAGGATGAAGAGAAG+AGG | + | chr8.3:12379314-12379333 | None:intergenic | 50.0% | |
| AGACTGGACCCTGATACAAG+TGG | - | chr8.3:12380501-12380520 | MS.gene59963:intron | 50.0% | |
| ATCGTGACCCTCTGTTTGCT+TGG | - | chr8.3:12380368-12380387 | MS.gene59963:intron | 50.0% | |
| CCCAAGCAAACTGGACATGT+TGG | + | chr8.3:12380329-12380348 | None:intergenic | 50.0% | |
| CCCTCTGTTTGCTTGGATCT+TGG | - | chr8.3:12380375-12380394 | MS.gene59963:intron | 50.0% | |
| GAATGGGGAAGCTACATACC+TGG | + | chr8.3:12380596-12380615 | None:intergenic | 50.0% | |
| GGAACGATGGGATGGAAGAT+AGG | - | chr8.3:12379508-12379527 | MS.gene59963:intron | 50.0% | |
| GTGGATTTGTCGGATGTGGA+AGG | - | chr8.3:12381840-12381859 | MS.gene59963:intron | 50.0% | |
| GTTACCTTGACCATGAGGAG+GGG | + | chr8.3:12381358-12381377 | None:intergenic | 50.0% | |
| TATCAGGGTCCAGTCTCTCT+GGG | + | chr8.3:12380497-12380516 | None:intergenic | 50.0% | |
| TGGAGCGGAGAAGATGAGTT+CGG | + | chr8.3:12379189-12379208 | None:intergenic | 50.0% | |
| TTACCTTGACCATGAGGAGG+GGG | + | chr8.3:12381357-12381376 | None:intergenic | 50.0% | |
| ! | AAGCTCCGTATCTGAAGCAG+TGG | - | chr8.3:12383237-12383256 | MS.gene59963:intron | 50.0% |
| ! | CGTATCTGAAGCAGTGGAGA+AGG | - | chr8.3:12383243-12383262 | MS.gene59963:intron | 50.0% |
| ! | GGGTTTTCTTGGGATTGGGT+TGG | + | chr8.3:12379209-12379228 | None:intergenic | 50.0% |
| !! | GGTCCTTGATTTGGAGGAAC+AGG | - | chr8.3:12383651-12383670 | MS.gene59963:CDS | 50.0% |
| !! | TCAATGCATTCTGGCTCGCT+TGG | + | chr8.3:12381262-12381281 | None:intergenic | 50.0% |
| !! | TGAGAGGGTCCTTGATTTGG+AGG | - | chr8.3:12383645-12383664 | MS.gene59963:CDS | 50.0% |
| !! | TTCTTGGGATTGGGTTGGAG+CGG | + | chr8.3:12379204-12379223 | None:intergenic | 50.0% |
| GAAGGTTGCTCATGAGCCAC+TGG | + | chr8.3:12383848-12383867 | None:intergenic | 55.0% | |
| GCTCATGAGCAACCTTCTCC+TGG | - | chr8.3:12383851-12383870 | MS.gene59963:CDS | 55.0% | |
| GGAGCGGAGAAGATGAGTTC+GGG | + | chr8.3:12379188-12379207 | None:intergenic | 55.0% | |
| GGAGGGAACAGTCTTACCAG+TGG | - | chr8.3:12383829-12383848 | MS.gene59963:CDS | 55.0% | |
| GTATCAGGGTCCAGTCTCTC+TGG | + | chr8.3:12380498-12380517 | None:intergenic | 55.0% | |
| GTGGAGAAGGCTGCAACTTC+TGG | - | chr8.3:12383256-12383275 | MS.gene59963:intron | 55.0% | |
| TACCTTGACCATGAGGAGGG+GGG | + | chr8.3:12381356-12381375 | None:intergenic | 55.0% | |
| ! | GAGAGGAGTGTGAAGCGCTT+CGG | + | chr8.3:12379268-12379287 | None:intergenic | 55.0% |
| ! | GATTCTCGTCGTCGACTGAG+TGG | + | chr8.3:12379157-12379176 | None:intergenic | 55.0% |
| GGCTGCAACTTCTGGCATGC+TGG | - | chr8.3:12383264-12383283 | MS.gene59963:intron | 60.0% | |
| ! | CGTCGTCGACTGAGTGGACT+CGG | + | chr8.3:12379151-12379170 | None:intergenic | 60.0% |
| CACCCCCCTCCTCATGGTCA+AGG | - | chr8.3:12381351-12381370 | MS.gene59963:intron | 65.0% | |
| CCTTTGCACCCCCCTCCTCA+TGG | - | chr8.3:12381345-12381364 | MS.gene59963:intron | 65.0% | |
| GTCTGGTCGAAGGCGGCGTT+AGG | - | chr8.3:12383895-12383914 | MS.gene59963:CDS | 65.0% | |
| GTTGCTGGGACTCCTCCAGC+TGG | - | chr8.3:12380290-12380309 | MS.gene59963:intron | 65.0% | |
| ! | AGGAGGGGGGTGCAAAGGCA+AGG | + | chr8.3:12381343-12381362 | None:intergenic | 65.0% |
| ! | CCATGAGGAGGGGGGTGCAA+AGG | + | chr8.3:12381348-12381367 | None:intergenic | 65.0% |
| ! | CGTCGACTGAGTGGACTCGG+AGG | + | chr8.3:12379148-12379167 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 12379137 | 12383916 | 12379137 | ID=MS.gene59963 |
| chr8.3 | mRNA | 12379137 | 12383916 | 12379137 | ID=MS.gene59963.t1;Parent=MS.gene59963 |
| chr8.3 | exon | 12383636 | 12383916 | 12383636 | ID=MS.gene59963.t1.exon1;Parent=MS.gene59963.t1 |
| chr8.3 | CDS | 12383636 | 12383916 | 12383636 | ID=cds.MS.gene59963.t1;Parent=MS.gene59963.t1 |
| chr8.3 | exon | 12383436 | 12383544 | 12383436 | ID=MS.gene59963.t1.exon2;Parent=MS.gene59963.t1 |
| chr8.3 | CDS | 12383436 | 12383544 | 12383436 | ID=cds.MS.gene59963.t1;Parent=MS.gene59963.t1 |
| chr8.3 | exon | 12382706 | 12382820 | 12382706 | ID=MS.gene59963.t1.exon3;Parent=MS.gene59963.t1 |
| chr8.3 | CDS | 12382706 | 12382820 | 12382706 | ID=cds.MS.gene59963.t1;Parent=MS.gene59963.t1 |
| chr8.3 | exon | 12382457 | 12382554 | 12382457 | ID=MS.gene59963.t1.exon4;Parent=MS.gene59963.t1 |
| chr8.3 | CDS | 12382457 | 12382554 | 12382457 | ID=cds.MS.gene59963.t1;Parent=MS.gene59963.t1 |
| chr8.3 | exon | 12381192 | 12381298 | 12381192 | ID=MS.gene59963.t1.exon5;Parent=MS.gene59963.t1 |
| chr8.3 | CDS | 12381192 | 12381298 | 12381192 | ID=cds.MS.gene59963.t1;Parent=MS.gene59963.t1 |
| chr8.3 | exon | 12380768 | 12381023 | 12380768 | ID=MS.gene59963.t1.exon6;Parent=MS.gene59963.t1 |
| chr8.3 | CDS | 12380768 | 12381023 | 12380768 | ID=cds.MS.gene59963.t1;Parent=MS.gene59963.t1 |
| chr8.3 | exon | 12380168 | 12380221 | 12380168 | ID=MS.gene59963.t1.exon7;Parent=MS.gene59963.t1 |
| chr8.3 | CDS | 12380168 | 12380221 | 12380168 | ID=cds.MS.gene59963.t1;Parent=MS.gene59963.t1 |
| chr8.3 | exon | 12379714 | 12379857 | 12379714 | ID=MS.gene59963.t1.exon8;Parent=MS.gene59963.t1 |
| chr8.3 | CDS | 12379714 | 12379857 | 12379714 | ID=cds.MS.gene59963.t1;Parent=MS.gene59963.t1 |
| chr8.3 | exon | 12379578 | 12379642 | 12379578 | ID=MS.gene59963.t1.exon9;Parent=MS.gene59963.t1 |
| chr8.3 | CDS | 12379578 | 12379642 | 12379578 | ID=cds.MS.gene59963.t1;Parent=MS.gene59963.t1 |
| chr8.3 | exon | 12379381 | 12379435 | 12379381 | ID=MS.gene59963.t1.exon10;Parent=MS.gene59963.t1 |
| chr8.3 | CDS | 12379381 | 12379435 | 12379381 | ID=cds.MS.gene59963.t1;Parent=MS.gene59963.t1 |
| chr8.3 | exon | 12379137 | 12379295 | 12379137 | ID=MS.gene59963.t1.exon11;Parent=MS.gene59963.t1 |
| chr8.3 | CDS | 12379137 | 12379295 | 12379137 | ID=cds.MS.gene59963.t1;Parent=MS.gene59963.t1 |
| Gene Sequence |
| Protein sequence |
