Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59964.t1 | XP_003609376.2 | 79.3 | 474 | 48 | 7 | 1 | 426 | 1 | 472 | 1.80E-191 | 678.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59964.t1 | E5KGE0 | 55.7 | 440 | 156 | 9 | 1 | 405 | 1 | 436 | 4.4e-114 | 412.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59964.t1 | G7JE65 | 79.3 | 474 | 48 | 7 | 1 | 426 | 1 | 472 | 1.3e-191 | 678.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049287 | MS.gene59964 | 0.823623 | 1.25E-53 | -1.69E-46 |
| MS.gene054952 | MS.gene59964 | 0.826259 | 2.99E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067452 | MS.gene59964 | PPI |
| MS.gene85936 | MS.gene59964 | PPI |
| MS.gene83572 | MS.gene59964 | PPI |
| MS.gene86975 | MS.gene59964 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59964.t1 | MTR_4g114970 | 79.536 | 474 | 47 | 7 | 1 | 426 | 1 | 472 | 0.0 | 712 |
| MS.gene59964.t1 | MTR_4g114970 | 85.128 | 390 | 38 | 4 | 1 | 372 | 1 | 388 | 0.0 | 662 |
| MS.gene59964.t1 | MTR_2g104600 | 41.103 | 399 | 170 | 9 | 31 | 405 | 31 | 388 | 2.26e-97 | 298 |
| MS.gene59964.t1 | MTR_2g104600 | 37.376 | 404 | 172 | 10 | 31 | 410 | 31 | 377 | 3.58e-85 | 266 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59964.t1 | AT2G42160 | 54.091 | 440 | 163 | 9 | 1 | 405 | 1 | 436 | 6.29e-161 | 461 |
| MS.gene59964.t1 | AT2G42160 | 51.907 | 472 | 163 | 10 | 1 | 412 | 1 | 468 | 9.43e-161 | 462 |
| MS.gene59964.t1 | AT2G42160 | 55.611 | 401 | 145 | 7 | 1 | 372 | 1 | 397 | 7.33e-153 | 439 |
| MS.gene59964.t1 | AT2G26000 | 37.813 | 439 | 223 | 12 | 8 | 411 | 11 | 434 | 1.31e-96 | 298 |
| MS.gene59964.t1 | AT2G26000 | 37.813 | 439 | 223 | 12 | 8 | 411 | 11 | 434 | 1.31e-96 | 298 |
| MS.gene59964.t1 | AT2G26000 | 37.972 | 424 | 225 | 12 | 8 | 411 | 11 | 416 | 3.10e-94 | 291 |
Find 94 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTGCGTTCTGTGAATTT+AGG | 0.153912 | 8.3:+12371761 | None:intergenic |
| GGTGAGAGAGAATTGGAATT+AGG | 0.180412 | 8.3:+12371698 | None:intergenic |
| CTCTGCGTTCTGTGAATTTA+GGG | 0.191110 | 8.3:+12371762 | None:intergenic |
| AAACTTCTTGCCATTGAAAT+AGG | 0.232877 | 8.3:+12371404 | None:intergenic |
| GTGCGTATTCCACTTGTATC+AGG | 0.257066 | 8.3:+12370480 | None:intergenic |
| GTGAGAGAGAATTGGAATTA+GGG | 0.271739 | 8.3:+12371699 | None:intergenic |
| GTGGAGAAGGCTGCAACTTC+TGG | 0.280137 | 8.3:-12367737 | MS.gene59964:CDS |
| GAATGAGAGGGTCCTTGATT+TGG | 0.301939 | 8.3:-12367354 | MS.gene59964:CDS |
| TCATCGAAGGAGAAATAATT+AGG | 0.314747 | 8.3:+12371653 | None:intergenic |
| CATCCTGTTGTTGACATAAT+CGG | 0.338420 | 8.3:+12369228 | None:intergenic |
| GAGAAGAGGTGAGAGAGAAT+TGG | 0.361552 | 8.3:+12371691 | None:intergenic |
| AGTGAAGATTTAGAAGTAAT+GGG | 0.371311 | 8.3:-12368754 | MS.gene59964:CDS |
| TTATGTCCATCGACTGAATC+AGG | 0.387311 | 8.3:-12368860 | MS.gene59964:CDS |
| ACAACAAATTTGGGATTATG+TGG | 0.392975 | 8.3:-12368890 | MS.gene59964:CDS |
| TTCATCATCTTCTCTTCATC+AGG | 0.396642 | 8.3:-12371592 | MS.gene59964:intron |
| ACCAACATGTCCAGTTTGCT+TGG | 0.402731 | 8.3:-12370665 | MS.gene59964:CDS |
| CCGTCTTCTTACATCTCAAT+TGG | 0.403056 | 8.3:-12368143 | MS.gene59964:CDS |
| GTCTGGGTTTGTATGATTTG+TGG | 0.411595 | 8.3:-12369167 | MS.gene59964:CDS |
| GTGGAACATTAGATGATGTC+TGG | 0.413609 | 8.3:-12369184 | MS.gene59964:CDS |
| TGAAACTCACCCAAGCAAAC+TGG | 0.414850 | 8.3:+12370655 | None:intergenic |
| GGTCCTTGATTTGGAGGAAC+AGG | 0.415267 | 8.3:-12367345 | MS.gene59964:intron |
| TTCAACTTTGCTGTTAAAGA+AGG | 0.416559 | 8.3:+12368730 | None:intergenic |
| GCATTTCATACCTATTTCAA+TGG | 0.416711 | 8.3:-12371414 | MS.gene59964:CDS |
| TGTTTGAATCCCAGAGAGAC+TGG | 0.421884 | 8.3:-12370505 | MS.gene59964:intron |
| TTCTTGCTGTTTCCAGGAGA+AGG | 0.425015 | 8.3:+12367132 | None:intergenic |
| GCTCATGAGCAACCTTCTCC+TGG | 0.443145 | 8.3:-12367144 | MS.gene59964:CDS |
| GTTCACTGTATGTCTCTAGA+AGG | 0.443877 | 8.3:-12368799 | MS.gene59964:CDS |
| GGAGCGGAGAAGATGAGTTC+GGG | 0.448861 | 8.3:+12371804 | None:intergenic |
| GAGAGGAGTGTGAAGCGCTT+CGG | 0.450487 | 8.3:+12371723 | None:intergenic |
| GGCTGCAACTTCTGGCATGC+TGG | 0.450669 | 8.3:-12367729 | MS.gene59964:CDS |
| TGGAGCGGAGAAGATGAGTT+CGG | 0.454323 | 8.3:+12371803 | None:intergenic |
| GATGAAGACGATCAAGATAG+TGG | 0.455616 | 8.3:+12371609 | None:intergenic |
| AGAATTGGAATTAGGGAGAG+AGG | 0.456750 | 8.3:+12371706 | None:intergenic |
| TAGTGAAGATTTAGAAGTAA+TGG | 0.460456 | 8.3:-12368755 | MS.gene59964:CDS |
| GGAACGATGGGATGGAAGAT+AGG | 0.463072 | 8.3:-12371479 | MS.gene59964:CDS |
| TCTCCTTCGATGATTTCATT+CGG | 0.467942 | 8.3:-12371643 | MS.gene59964:CDS |
| CTGCCGATTATGTCAACAAC+AGG | 0.469592 | 8.3:-12369231 | MS.gene59964:CDS |
| TCGGAATGTGAAGAAGTTGC+TGG | 0.471476 | 8.3:-12370715 | MS.gene59964:CDS |
| CGTCGTCGACTGAGTGGACT+CGG | 0.478651 | 8.3:+12371840 | None:intergenic |
| TTTGATTTGGTAGGAACGAT+GGG | 0.480219 | 8.3:-12371491 | MS.gene59964:intron |
| TGTATGATTTGTGGATTTGT+CGG | 0.483896 | 8.3:-12369158 | MS.gene59964:CDS |
| GTGGACATATTTGTCTTGCC+AGG | 0.485200 | 8.3:-12370415 | MS.gene59964:intron |
| TGAGAGGGTCCTTGATTTGG+AGG | 0.485934 | 8.3:-12367351 | MS.gene59964:CDS |
| CCGTTATTACTTACCTCAGC+AGG | 0.492902 | 8.3:+12371378 | None:intergenic |
| ATTTGTGGATTTGTCGGATG+TGG | 0.494341 | 8.3:-12369152 | MS.gene59964:CDS |
| CCAACATGTCCAGTTTGCTT+GGG | 0.495855 | 8.3:-12370664 | MS.gene59964:intron |
| GTTGCTGGGACTCCTCCAGC+TGG | 0.513889 | 8.3:-12370700 | MS.gene59964:CDS |
| CAGGATCAATCTAGAATTGA+CGG | 0.519347 | 8.3:-12368841 | MS.gene59964:CDS |
| TTCACTGTATGTCTCTAGAA+GGG | 0.522047 | 8.3:-12368798 | MS.gene59964:CDS |
| TTTGCTTTCCGTGGAATACT+CGG | 0.522856 | 8.3:-12370734 | MS.gene59964:CDS |
| TGCGTATTCCACTTGTATCA+GGG | 0.527421 | 8.3:+12370481 | None:intergenic |
| GTTCCACAAATAAAACAAGT+TGG | 0.529607 | 8.3:+12369200 | None:intergenic |
| CGCAAGGGCATTGAAATGAA+TGG | 0.532039 | 8.3:+12370445 | None:intergenic |
| GGTATTTCTGTACAACCAGC+TGG | 0.536457 | 8.3:+12370685 | None:intergenic |
| ATTGATCCTGATTCAGTCGA+TGG | 0.544517 | 8.3:+12368854 | None:intergenic |
| ATACCTGTTCCTCCAAATCA+AGG | 0.546149 | 8.3:+12367342 | None:intergenic |
| ATGAAGACGATCAAGATAGT+GGG | 0.546605 | 8.3:+12371610 | None:intergenic |
| CTTTAACAGCAAAGTTGAAG+CGG | 0.546937 | 8.3:-12368726 | MS.gene59964:CDS |
| ATTTGGTAGGAACGATGGGA+TGG | 0.551457 | 8.3:-12371487 | MS.gene59964:intron |
| TGGAACATTAGATGATGTCT+GGG | 0.559204 | 8.3:-12369183 | MS.gene59964:CDS |
| TCTGCGTTCTGTGAATTTAG+GGG | 0.559384 | 8.3:+12371763 | None:intergenic |
| TTCACATTCCGAGTATTCCA+CGG | 0.559393 | 8.3:+12370726 | None:intergenic |
| CGTATCTGAAGCAGTGGAGA+AGG | 0.559498 | 8.3:-12367750 | MS.gene59964:CDS |
| AGATTAAAGAAGCAGAAGAG+AGG | 0.561135 | 8.3:-12367542 | MS.gene59964:intron |
| CAACAAATTTGGGATTATGT+GGG | 0.563048 | 8.3:-12368889 | MS.gene59964:CDS |
| GAAGGTTGCTCATGAGCCAC+TGG | 0.563743 | 8.3:+12367150 | None:intergenic |
| CGGAATGTGAAGAAGTTGCT+GGG | 0.571574 | 8.3:-12370714 | MS.gene59964:CDS |
| TTCTTGGGATTGGGTTGGAG+CGG | 0.574169 | 8.3:+12371788 | None:intergenic |
| GGATCTCGTCGTCGACTGAG+TGG | 0.574462 | 8.3:+12371834 | None:intergenic |
| AATGCCCTTGCGTCTCAAAG+TGG | 0.575637 | 8.3:-12370434 | MS.gene59964:CDS |
| CATTGAAGTCGATGAATGAG+AGG | 0.577929 | 8.3:-12367367 | MS.gene59964:CDS |
| TAGAATTGACGGCAAGTCGA+AGG | 0.578499 | 8.3:-12368830 | MS.gene59964:CDS |
| TATGTCCACTTTGAGACGCA+AGG | 0.588521 | 8.3:+12370429 | None:intergenic |
| AGAAAGAAATGTTGTTGCTG+AGG | 0.588529 | 8.3:-12367675 | MS.gene59964:intron |
| AAGATGAGTTCGGGATCGAG+TGG | 0.588594 | 8.3:+12371813 | None:intergenic |
| GTGGATTTGTCGGATGTGGA+AGG | 0.595592 | 8.3:-12369148 | MS.gene59964:intron |
| CCCAAGCAAACTGGACATGT+TGG | 0.601547 | 8.3:+12370664 | None:intergenic |
| AAAGCTCGTATCTGAAGCAG+TGG | 0.608235 | 8.3:-12367756 | MS.gene59964:intron |
| ATGTCCACTTTGAGACGCAA+GGG | 0.620907 | 8.3:+12370430 | None:intergenic |
| GTGGACTCGGAGGAAGAACA+TGG | 0.623052 | 8.3:+12371853 | None:intergenic |
| ACAGCGAGGATGAAGAGAAG+AGG | 0.623767 | 8.3:+12371677 | None:intergenic |
| TCACTGTATGTCTCTAGAAG+GGG | 0.634476 | 8.3:-12368797 | MS.gene59964:CDS |
| CCAATTGAGATGTAAGAAGA+CGG | 0.636618 | 8.3:+12368143 | None:intergenic |
| AACAGAAGTCTGGTCGAAGG+CGG | 0.642304 | 8.3:-12367108 | MS.gene59964:CDS |
| AAACCGAATGAAATCATCGA+AGG | 0.643428 | 8.3:+12371640 | None:intergenic |
| GTGAAGATTTAGAAGTAATG+GGG | 0.647973 | 8.3:-12368753 | MS.gene59964:CDS |
| ATTGAAGTCGATGAATGAGA+GGG | 0.674240 | 8.3:-12367366 | MS.gene59964:CDS |
| AGACTGGACCCTGATACAAG+TGG | 0.679214 | 8.3:-12370489 | MS.gene59964:CDS |
| CCTAAATTCACAGAACGCAG+AGG | 0.681655 | 8.3:-12371761 | MS.gene59964:CDS |
| TGAAGACGATCAAGATAGTG+GGG | 0.690985 | 8.3:+12371611 | None:intergenic |
| ATTTCTGTACAACCAGCTGG+AGG | 0.702761 | 8.3:+12370688 | None:intergenic |
| AGAAATAATTAGGAACAGCG+AGG | 0.702814 | 8.3:+12371663 | None:intergenic |
| GGAGGGAACAGTCTTACCAG+TGG | 0.721862 | 8.3:-12367166 | MS.gene59964:CDS |
| CGTCGACTGAGTGGACTCGG+AGG | 0.727644 | 8.3:+12371843 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAAAATCAACAATTA+GGG | + | chr8.3:12367429-12367448 | None:intergenic | 10.0% |
| !! | ATAATTATGAAATATTATCT+TGG | - | chr8.3:12368859-12368878 | MS.gene59964:CDS | 10.0% |
| !! | TAATTATGAAATATTATCTT+GGG | - | chr8.3:12368860-12368879 | MS.gene59964:CDS | 10.0% |
| !! | TATATAAATGACAATAAAAT+GGG | + | chr8.3:12369899-12369918 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTCTAAAAAACA+AGG | - | chr8.3:12369441-12369460 | MS.gene59964:intron | 10.0% |
| !! | ATAAATTTAAAAAACGACAA+AGG | + | chr8.3:12368102-12368121 | None:intergenic | 15.0% |
| !! | CAAAATTAAAATCAACAATT+AGG | + | chr8.3:12367430-12367449 | None:intergenic | 15.0% |
| !! | CAAGTAAATAGTATTAATAA+GGG | - | chr8.3:12367953-12367972 | MS.gene59964:intron | 15.0% |
| !! | CATATAGTTATTCTATAAAT+GGG | - | chr8.3:12370592-12370611 | MS.gene59964:intron | 15.0% |
| !! | CATTTATAGAATAACTATAT+GGG | + | chr8.3:12370593-12370612 | None:intergenic | 15.0% |
| !! | CCAACTTAAATTAATAATTA+GGG | + | chr8.3:12369395-12369414 | None:intergenic | 15.0% |
| !! | CTATATAAATGACAATAAAA+TGG | + | chr8.3:12369900-12369919 | None:intergenic | 15.0% |
| !! | TATTATTACACTTTAATCTT+TGG | - | chr8.3:12368583-12368602 | MS.gene59964:intron | 15.0% |
| !! | TCAAATAAGTTAATTCAAAT+AGG | - | chr8.3:12367826-12367845 | MS.gene59964:intron | 15.0% |
| !! | TCAAGTAAATAGTATTAATA+AGG | - | chr8.3:12367952-12367971 | MS.gene59964:intron | 15.0% |
| !! | TCATAATACTAAAACAAAAA+TGG | + | chr8.3:12371129-12371148 | None:intergenic | 15.0% |
| !! | TTTAAATATGTGATCATTTA+GGG | - | chr8.3:12371538-12371557 | MS.gene59964:intron | 15.0% |
| !! | TTTGTTTAACATATTAAGTA+GGG | + | chr8.3:12369871-12369890 | None:intergenic | 15.0% |
| !!! | AAGTATGTCTAAATAAATTT+TGG | + | chr8.3:12369155-12369174 | None:intergenic | 15.0% |
| !!! | AGTAAAGTTGTTTTTTTTTT+TGG | - | chr8.3:12371486-12371505 | MS.gene59964:intron | 15.0% |
| !!! | ATTATAATGTTAACTTGTTA+AGG | + | chr8.3:12370316-12370335 | None:intergenic | 15.0% |
| !!! | CATTTTATTGTCATTTATAT+AGG | - | chr8.3:12369898-12369917 | MS.gene59964:intron | 15.0% |
| !!! | CCTAATTATTAATTTAAGTT+GGG | - | chr8.3:12369393-12369412 | MS.gene59964:intron | 15.0% |
| !!! | TGTTGATTTTAATTTTGATT+TGG | - | chr8.3:12367433-12367452 | MS.gene59964:intron | 15.0% |
| !!! | TTGTCGTTTTTTAAATTTAT+TGG | - | chr8.3:12368102-12368121 | MS.gene59964:intron | 15.0% |
| !!! | TTTTAATCTAGATATAAAGA+AGG | - | chr8.3:12369968-12369987 | MS.gene59964:intron | 15.0% |
| !!! | TTTTGTTTAACATATTAAGT+AGG | + | chr8.3:12369872-12369891 | None:intergenic | 15.0% |
| !! | AATAGGACTTAAGTAAAAAT+AGG | - | chr8.3:12367843-12367862 | MS.gene59964:intron | 20.0% |
| !! | ACTTATGATGTTTATATTGT+AGG | - | chr8.3:12369682-12369701 | MS.gene59964:intron | 20.0% |
| !! | CCATATAGTTATTCTATAAA+TGG | - | chr8.3:12370591-12370610 | MS.gene59964:intron | 20.0% |
| !! | CCATTTATAGAATAACTATA+TGG | + | chr8.3:12370594-12370613 | None:intergenic | 20.0% |
| !! | CCCAACTTAAATTAATAATT+AGG | + | chr8.3:12369396-12369415 | None:intergenic | 20.0% |
| !! | CCCTAATTATTAATTTAAGT+TGG | - | chr8.3:12369392-12369411 | MS.gene59964:intron | 20.0% |
| !! | GTTTAAATATGTGATCATTT+AGG | - | chr8.3:12371537-12371556 | MS.gene59964:intron | 20.0% |
| !! | TCATTAAAAATTCAGAAATG+TGG | - | chr8.3:12371366-12371385 | MS.gene59964:intron | 20.0% |
| !! | TGAAATGAAGCTTATATTTA+GGG | - | chr8.3:12368004-12368023 | MS.gene59964:intron | 20.0% |
| !! | TGGAAATATTATTGTATTGA+TGG | - | chr8.3:12369641-12369660 | MS.gene59964:intron | 20.0% |
| !! | TTAAACATGTAATGAGAATA+TGG | + | chr8.3:12371523-12371542 | None:intergenic | 20.0% |
| !! | TTCAAAAAAGACTTGTATTT+AGG | - | chr8.3:12368038-12368057 | MS.gene59964:intron | 20.0% |
| !! | TTGAAATGAAGCTTATATTT+AGG | - | chr8.3:12368003-12368022 | MS.gene59964:intron | 20.0% |
| !! | TTTATCTTTATACAAGAGTT+TGG | + | chr8.3:12369015-12369034 | None:intergenic | 20.0% |
| !!! | AAAGGTATTATTGATTATTG+AGG | + | chr8.3:12368084-12368103 | None:intergenic | 20.0% |
| !!! | ACTAAATGGATTTTAATATC+TGG | + | chr8.3:12369363-12369382 | None:intergenic | 20.0% |
| !!! | ATTACAGAACTTTTTCAAAA+TGG | + | chr8.3:12367389-12367408 | None:intergenic | 20.0% |
| !!! | ATTTTAGAACACAACAAATT+TGG | - | chr8.3:12370037-12370056 | MS.gene59964:intron | 20.0% |
| !!! | ATTTTATGCTGATACTAATT+TGG | - | chr8.3:12370446-12370465 | MS.gene59964:CDS | 20.0% |
| !!! | ATTTTCTAAAAAACAAGGAA+GGG | - | chr8.3:12369446-12369465 | MS.gene59964:intron | 20.0% |
| !!! | GACTTTTTTTTCTTTTTCAA+GGG | + | chr8.3:12367699-12367718 | None:intergenic | 20.0% |
| !!! | GAGAATATCATAATTTTGTT+TGG | - | chr8.3:12368890-12368909 | MS.gene59964:CDS | 20.0% |
| !!! | GATTTTAATTTTGATTTGGT+AGG | - | chr8.3:12367437-12367456 | MS.gene59964:intron | 20.0% |
| !!! | TATTTTCTAAAAAACAAGGA+AGG | - | chr8.3:12369445-12369464 | MS.gene59964:intron | 20.0% |
| !!! | TGACTTTTTTTTCTTTTTCA+AGG | + | chr8.3:12367700-12367719 | None:intergenic | 20.0% |
| !!! | TTAATGTGTTATTTTGTGTA+TGG | - | chr8.3:12367874-12367893 | MS.gene59964:intron | 20.0% |
| !!! | TTTTAGAACACAACAAATTT+GGG | - | chr8.3:12370038-12370057 | MS.gene59964:intron | 20.0% |
| !!! | TTTTATGCTGATACTAATTT+GGG | - | chr8.3:12370447-12370466 | MS.gene59964:CDS | 20.0% |
| ! | AAAGAGAGATATACGTAATA+AGG | + | chr8.3:12368132-12368151 | None:intergenic | 25.0% |
| ! | AAAGATAAAAGATGCAACAT+GGG | - | chr8.3:12369026-12369045 | MS.gene59964:intron | 25.0% |
| ! | AAGTGATGTAATTTATAGTG+TGG | - | chr8.3:12370977-12370996 | MS.gene59964:intron | 25.0% |
| ! | ACATGACAAGTACAAATTTA+TGG | + | chr8.3:12367595-12367614 | None:intergenic | 25.0% |
| ! | ACTTATTTGAGCTTATTTAC+TGG | + | chr8.3:12367816-12367835 | None:intergenic | 25.0% |
| ! | AGTGAAAAAAATTTCAAGGA+TGG | + | chr8.3:12370848-12370867 | None:intergenic | 25.0% |
| ! | AGTGAAGATTTAGAAGTAAT+GGG | - | chr8.3:12370183-12370202 | MS.gene59964:intron | 25.0% |
| ! | ATTACACTTTAATCTTTGGT+TGG | - | chr8.3:12368587-12368606 | MS.gene59964:intron | 25.0% |
| ! | ATTGGAAAACTTCTATACAA+AGG | + | chr8.3:12371641-12371660 | None:intergenic | 25.0% |
| ! | CGGAAAGCAAAAATAAAATA+TGG | + | chr8.3:12368194-12368213 | None:intergenic | 25.0% |
| ! | GTAAACATTAAACTCTATTC+AGG | - | chr8.3:12370887-12370906 | MS.gene59964:intron | 25.0% |
| ! | GTGTAATAATATGTCAAAAC+AGG | + | chr8.3:12368574-12368593 | None:intergenic | 25.0% |
| ! | TAAAGATAAAAGATGCAACA+TGG | - | chr8.3:12369025-12369044 | MS.gene59964:intron | 25.0% |
| ! | TAACTTCATTCCAAACAAAT+TGG | + | chr8.3:12371444-12371463 | None:intergenic | 25.0% |
| ! | TAGTGAAGATTTAGAAGTAA+TGG | - | chr8.3:12370182-12370201 | MS.gene59964:intron | 25.0% |
| ! | TCAAATGATGATCAAAATGT+AGG | - | chr8.3:12368158-12368177 | MS.gene59964:CDS | 25.0% |
| ! | TTATGAATCCTTACTAATTG+AGG | - | chr8.3:12371143-12371162 | MS.gene59964:intron | 25.0% |
| ! | TTGGAAAACTTCTATACAAA+GGG | + | chr8.3:12371640-12371659 | None:intergenic | 25.0% |
| !! | AATTTTATTGTTCTCCTGAT+GGG | - | chr8.3:12371658-12371677 | MS.gene59964:CDS | 25.0% |
| !!! | AACCTTAACAAGTTTTAACA+AGG | - | chr8.3:12370286-12370305 | MS.gene59964:intron | 25.0% |
| !!! | ATAGGTATAGTGTTTTGATT+AGG | - | chr8.3:12367476-12367495 | MS.gene59964:intron | 25.0% |
| !!! | ATCAGTTCTTTAATTTTCGT+TGG | - | chr8.3:12369824-12369843 | MS.gene59964:intron | 25.0% |
| !!! | CTTGAAATTTTTTTCACTGT+GGG | - | chr8.3:12370850-12370869 | MS.gene59964:intron | 25.0% |
| !!! | TACACTTTTCTAGTTCATTT+TGG | + | chr8.3:12371238-12371257 | None:intergenic | 25.0% |
| !!! | TATTTGCTTTTGTTTTGTCA+GGG | - | chr8.3:12369922-12369941 | MS.gene59964:intron | 25.0% |
| !!! | TATTTTATTTTTGCTTTCCG+TGG | - | chr8.3:12368194-12368213 | MS.gene59964:intron | 25.0% |
| !!! | TTATTTGCTTTTGTTTTGTC+AGG | - | chr8.3:12369921-12369940 | MS.gene59964:intron | 25.0% |
| !!! | TTGAAATTTTTTTCACTGTG+GGG | - | chr8.3:12370851-12370870 | MS.gene59964:intron | 25.0% |
| AAACTTCTTGCCATTGAAAT+AGG | + | chr8.3:12367536-12367555 | None:intergenic | 30.0% | |
| AAGAGTTATATTGCCTAACT+AGG | - | chr8.3:12368704-12368723 | MS.gene59964:intron | 30.0% | |
| CATCAGGAGAACAATAAAAT+TGG | + | chr8.3:12371659-12371678 | None:intergenic | 30.0% | |
| CCAAAGTTTAAGAACGTATT+TGG | - | chr8.3:12368818-12368837 | MS.gene59964:CDS | 30.0% | |
| CCAAATACGTTCTTAAACTT+TGG | + | chr8.3:12368821-12368840 | None:intergenic | 30.0% | |
| CCACAGTGAAAAAAATTTCA+AGG | + | chr8.3:12370852-12370871 | None:intergenic | 30.0% | |
| CTATACAAAGGGATTAATGA+AGG | + | chr8.3:12371629-12371648 | None:intergenic | 30.0% | |
| GACATACTTCACTTATTGTT+CGG | - | chr8.3:12369166-12369185 | MS.gene59964:CDS | 30.0% | |
| GATAAAATGTCAGACTCAAA+TGG | - | chr8.3:12371742-12371761 | MS.gene59964:CDS | 30.0% | |
| GATGTGTAAACATTGTTTCA+TGG | - | chr8.3:12370645-12370664 | MS.gene59964:intron | 30.0% | |
| GCATGTGAAAGAAAAATCAT+CGG | + | chr8.3:12370725-12370744 | None:intergenic | 30.0% | |
| GCATTTCATACCTATTTCAA+TGG | - | chr8.3:12367523-12367542 | MS.gene59964:intron | 30.0% | |
| GTGAAGATTTAGAAGTAATG+GGG | - | chr8.3:12370184-12370203 | MS.gene59964:intron | 30.0% | |
| GTTCCACAAATAAAACAAGT+TGG | + | chr8.3:12369740-12369759 | None:intergenic | 30.0% | |
| GTTTCTTTCACTTATGATGA+AGG | - | chr8.3:12371013-12371032 | MS.gene59964:intron | 30.0% | |
| TAAGCTATCTTGACATCTTA+TGG | - | chr8.3:12367734-12367753 | MS.gene59964:CDS | 30.0% | |
| TAGGGAGAAAATACACTAAA+TGG | + | chr8.3:12369377-12369396 | None:intergenic | 30.0% | |
| TCATCGAAGGAGAAATAATT+AGG | + | chr8.3:12367287-12367306 | None:intergenic | 30.0% | |
| TGAACACATCTATATGCAAA+AGG | + | chr8.3:12367915-12367934 | None:intergenic | 30.0% | |
| ! | AAAACAGGTTTTCATGGAAT+GGG | + | chr8.3:12368559-12368578 | None:intergenic | 30.0% |
| ! | AAACAAATTGGTAGCTTAAG+TGG | + | chr8.3:12371432-12371451 | None:intergenic | 30.0% |
| ! | ACAACAAATTTGGGATTATG+TGG | - | chr8.3:12370047-12370066 | MS.gene59964:intron | 30.0% |
| ! | ACTTAAGCTACCAATTTGTT+TGG | - | chr8.3:12371431-12371450 | MS.gene59964:CDS | 30.0% |
| ! | CAACAAATTTGGGATTATGT+GGG | - | chr8.3:12370048-12370067 | MS.gene59964:intron | 30.0% |
| ! | CAATTTTATTGTTCTCCTGA+TGG | - | chr8.3:12371657-12371676 | MS.gene59964:CDS | 30.0% |
| ! | CTAGGTTGGAAAAAATTGAT+AGG | + | chr8.3:12369070-12369089 | None:intergenic | 30.0% |
| ! | CTCTGTCACTGATTAATTAA+TGG | - | chr8.3:12370744-12370763 | MS.gene59964:CDS | 30.0% |
| ! | TATGTCAAAACAGGTTTTCA+TGG | + | chr8.3:12368565-12368584 | None:intergenic | 30.0% |
| ! | TGTATGATTTGTGGATTTGT+CGG | - | chr8.3:12369779-12369798 | MS.gene59964:intron | 30.0% |
| !! | AGCCTTGTTAAAACTTGTTA+AGG | + | chr8.3:12370291-12370310 | None:intergenic | 30.0% |
| !! | TGTTTGCTGTGTAATTAACA+CGG | - | chr8.3:12370514-12370533 | MS.gene59964:intron | 30.0% |
| !! | TTCAACTTTGCTGTTAAAGA+AGG | + | chr8.3:12370210-12370229 | None:intergenic | 30.0% |
| !!! | AACAAAAGCACTGGTTTTAT+TGG | - | chr8.3:12369609-12369628 | MS.gene59964:intron | 30.0% |
| !!! | AAGCCAACTTGTTTTATTTG+TGG | - | chr8.3:12369734-12369753 | MS.gene59964:intron | 30.0% |
| !!! | CCTTGAAATTTTTTTCACTG+TGG | - | chr8.3:12370849-12370868 | MS.gene59964:intron | 30.0% |
| !!! | CTATCAATTTTTTCCAACCT+AGG | - | chr8.3:12369068-12369087 | MS.gene59964:intron | 30.0% |
| AAACACTTATGAGGACTGTT+TGG | + | chr8.3:12367790-12367809 | None:intergenic | 35.0% | |
| AAACCGAATGAAATCATCGA+AGG | + | chr8.3:12367300-12367319 | None:intergenic | 35.0% | |
| AACACTTATGAGGACTGTTT+GGG | + | chr8.3:12367789-12367808 | None:intergenic | 35.0% | |
| AACGAGTTTGAAAGTTTCTC+AGG | - | chr8.3:12368774-12368793 | MS.gene59964:CDS | 35.0% | |
| AAGGTAACAACTTCAACACA+TGG | - | chr8.3:12369317-12369336 | MS.gene59964:intron | 35.0% | |
| AATTGCTATGATACTCGCAA+TGG | - | chr8.3:12371045-12371064 | MS.gene59964:intron | 35.0% | |
| ACAACCAAATGTGTGACATT+AGG | + | chr8.3:12370671-12370690 | None:intergenic | 35.0% | |
| ACCTTTATACCATCCACTTT+GGG | + | chr8.3:12368950-12368969 | None:intergenic | 35.0% | |
| ACTTCTTGCCTCAATTAGTA+AGG | + | chr8.3:12371154-12371173 | None:intergenic | 35.0% | |
| AGAAAGAAATGTTGTTGCTG+AGG | - | chr8.3:12371262-12371281 | MS.gene59964:intron | 35.0% | |
| AGAAATAATTAGGAACAGCG+AGG | + | chr8.3:12367277-12367296 | None:intergenic | 35.0% | |
| AGACTCAAATGGAATAAAGG+AGG | - | chr8.3:12371753-12371772 | MS.gene59964:CDS | 35.0% | |
| AGATTAAAGAAGCAGAAGAG+AGG | - | chr8.3:12371395-12371414 | MS.gene59964:CDS | 35.0% | |
| AGCAAACAAAATCATACCAC+AGG | + | chr8.3:12370502-12370521 | None:intergenic | 35.0% | |
| ATACTTCACTTATTGTTCGG+AGG | - | chr8.3:12369169-12369188 | MS.gene59964:CDS | 35.0% | |
| ATGAAGACGATCAAGATAGT+GGG | + | chr8.3:12367330-12367349 | None:intergenic | 35.0% | |
| ATGAGCTTAATATCCTAGGT+TGG | + | chr8.3:12369084-12369103 | None:intergenic | 35.0% | |
| ATGATTCTTCATGAGAAGCT+TGG | - | chr8.3:12368657-12368676 | MS.gene59964:intron | 35.0% | |
| ATTGAAGTCGATGAATGAGA+GGG | - | chr8.3:12371571-12371590 | MS.gene59964:intron | 35.0% | |
| ATTGCTATGATACTCGCAAT+GGG | - | chr8.3:12371046-12371065 | MS.gene59964:intron | 35.0% | |
| CAGAGTTAAAGCAAGCAATA+AGG | + | chr8.3:12371306-12371325 | None:intergenic | 35.0% | |
| CATCCTGTTGTTGACATAAT+CGG | + | chr8.3:12369712-12369731 | None:intergenic | 35.0% | |
| CCAATTGAGATGTAAGAAGA+CGG | + | chr8.3:12370797-12370816 | None:intergenic | 35.0% | |
| CCAGAATGCATTGAATTTCT+GGG | - | chr8.3:12369216-12369235 | MS.gene59964:CDS | 35.0% | |
| CTAACTAGGATATTATCGTG+AGG | - | chr8.3:12368718-12368737 | MS.gene59964:intron | 35.0% | |
| CTAGTTTCTTGAATGTCAAC+TGG | - | chr8.3:12370954-12370973 | MS.gene59964:intron | 35.0% | |
| CTCACGATAATATCCTAGTT+AGG | + | chr8.3:12368720-12368739 | None:intergenic | 35.0% | |
| CTTTAACAGCAAAGTTGAAG+CGG | - | chr8.3:12370211-12370230 | MS.gene59964:intron | 35.0% | |
| GACTCAAATGGAATAAAGGA+GGG | - | chr8.3:12371754-12371773 | MS.gene59964:CDS | 35.0% | |
| GCATATAGATGTGTTCAATC+TGG | - | chr8.3:12367918-12367937 | MS.gene59964:intron | 35.0% | |
| GTCAGACTCAAATGGAATAA+AGG | - | chr8.3:12371750-12371769 | MS.gene59964:CDS | 35.0% | |
| GTGAGAGAGAATTGGAATTA+GGG | + | chr8.3:12367241-12367260 | None:intergenic | 35.0% | |
| TACCTTTATACCATCCACTT+TGG | + | chr8.3:12368951-12368970 | None:intergenic | 35.0% | |
| TACTGGCATAAACACTTATG+AGG | + | chr8.3:12367799-12367818 | None:intergenic | 35.0% | |
| TCACTTATGATGAAGGCTTT+GGG | - | chr8.3:12371020-12371039 | MS.gene59964:intron | 35.0% | |
| TCTCCTTCGATGATTTCATT+CGG | - | chr8.3:12367294-12367313 | MS.gene59964:intron | 35.0% | |
| TGAGGTGATTATGATTGTGT+GGG | - | chr8.3:12368375-12368394 | MS.gene59964:intron | 35.0% | |
| TGGAACATTAGATGATGTCT+GGG | - | chr8.3:12369754-12369773 | MS.gene59964:intron | 35.0% | |
| TGGAATGTGCAATGATAAGT+TGG | + | chr8.3:12369343-12369362 | None:intergenic | 35.0% | |
| TGTCATGTAGACATAGAGAT+AGG | - | chr8.3:12370567-12370586 | MS.gene59964:intron | 35.0% | |
| TTCACTTATGATGAAGGCTT+TGG | - | chr8.3:12371019-12371038 | MS.gene59964:intron | 35.0% | |
| TTCATCATCTTCTCTTCATC+AGG | - | chr8.3:12367345-12367364 | MS.gene59964:intron | 35.0% | |
| ! | AAACAGGTTTTCATGGAATG+GGG | + | chr8.3:12368558-12368577 | None:intergenic | 35.0% |
| ! | AATGCATTGAATTTCTGGGA+AGG | - | chr8.3:12369220-12369239 | MS.gene59964:CDS | 35.0% |
| ! | ATTAGACTCTTAGAGCATCA+TGG | - | chr8.3:12368617-12368636 | MS.gene59964:intron | 35.0% |
| ! | CAAAACAGGTTTTCATGGAA+TGG | + | chr8.3:12368560-12368579 | None:intergenic | 35.0% |
| ! | CAGGATCAATCTAGAATTGA+CGG | - | chr8.3:12370096-12370115 | MS.gene59964:intron | 35.0% |
| ! | GATGATTTCATTCGGTTTTG+TGG | - | chr8.3:12367302-12367321 | MS.gene59964:intron | 35.0% |
| ! | GTGAATTTAGGGGTTTTCTT+GGG | + | chr8.3:12367167-12367186 | None:intergenic | 35.0% |
| ! | TAATGGACATGAACAGATTG+TGG | - | chr8.3:12370761-12370780 | MS.gene59964:intron | 35.0% |
| ! | TGTGAATTTAGGGGTTTTCT+TGG | + | chr8.3:12367168-12367187 | None:intergenic | 35.0% |
| ! | TTAGACTCTTAGAGCATCAT+GGG | - | chr8.3:12368618-12368637 | MS.gene59964:intron | 35.0% |
| ! | TTCACTGTATGTCTCTAGAA+GGG | - | chr8.3:12370139-12370158 | MS.gene59964:intron | 35.0% |
| ! | TTCTAAAAAACAAGGAAGGG+CGG | - | chr8.3:12369449-12369468 | MS.gene59964:intron | 35.0% |
| !! | AAAAAGCTTCTCTGAAATCG+TGG | - | chr8.3:12370248-12370267 | MS.gene59964:intron | 35.0% |
| !! | AGGTAAGTAATAACGGGTTT+GGG | - | chr8.3:12367566-12367585 | MS.gene59964:CDS | 35.0% |
| !! | ATTGTGTGGGTTGATGTTTA+TGG | - | chr8.3:12368388-12368407 | MS.gene59964:intron | 35.0% |
| !! | CAACTTAGTTTGCAGCTTAT+AGG | - | chr8.3:12367645-12367664 | MS.gene59964:intron | 35.0% |
| !! | GTTTGCTGTGTAATTAACAC+GGG | - | chr8.3:12370515-12370534 | MS.gene59964:intron | 35.0% |
| !! | TTTGATTTGGTAGGAACGAT+GGG | - | chr8.3:12367446-12367465 | MS.gene59964:intron | 35.0% |
| !!! | ACACTTTTTAAGTCCCAAAG+TGG | - | chr8.3:12368934-12368953 | MS.gene59964:CDS | 35.0% |
| !!! | TTTTGATTTGGTAGGAACGA+TGG | - | chr8.3:12367445-12367464 | MS.gene59964:intron | 35.0% |
| !!! | TTTTTAAGTCCCAAAGTGGA+TGG | - | chr8.3:12368938-12368957 | MS.gene59964:CDS | 35.0% |
| AAAAACAGAAGTCTGGTCGA+AGG | - | chr8.3:12371826-12371845 | MS.gene59964:CDS | 40.0% | |
| AAGAAGCAGAAGAGAGGTAA+TGG | - | chr8.3:12371401-12371420 | MS.gene59964:CDS | 40.0% | |
| AAGTTGTTACCTTGACCATG+AGG | + | chr8.3:12369310-12369329 | None:intergenic | 40.0% | |
| AATGAGCTTCCGATTACCTA+AGG | + | chr8.3:12371351-12371370 | None:intergenic | 40.0% | |
| AGAATTGGAATTAGGGAGAG+AGG | + | chr8.3:12367234-12367253 | None:intergenic | 40.0% | |
| ATACCTGTTCCTCCAAATCA+AGG | + | chr8.3:12371598-12371617 | None:intergenic | 40.0% | |
| ATGAGCTTCCGATTACCTAA+GGG | + | chr8.3:12371350-12371369 | None:intergenic | 40.0% | |
| ATGGCCTAATGTCACACATT+TGG | - | chr8.3:12370664-12370683 | MS.gene59964:intron | 40.0% | |
| ATTGATCCTGATTCAGTCGA+TGG | + | chr8.3:12370086-12370105 | None:intergenic | 40.0% | |
| ATTTGTGGATTTGTCGGATG+TGG | - | chr8.3:12369785-12369804 | MS.gene59964:intron | 40.0% | |
| CAGCAAGAAAAACAGAAGTC+TGG | - | chr8.3:12371819-12371838 | MS.gene59964:CDS | 40.0% | |
| CAGGGAAGACTTTAATGCTA+TGG | - | chr8.3:12369940-12369959 | MS.gene59964:intron | 40.0% | |
| CATTGAAGTCGATGAATGAG+AGG | - | chr8.3:12371570-12371589 | MS.gene59964:intron | 40.0% | |
| CCCAGAAATTCAATGCATTC+TGG | + | chr8.3:12369219-12369238 | None:intergenic | 40.0% | |
| CCGTCTTCTTACATCTCAAT+TGG | - | chr8.3:12370794-12370813 | MS.gene59964:intron | 40.0% | |
| CCTGCTGAGGTAAGTAATAA+CGG | - | chr8.3:12367559-12367578 | MS.gene59964:CDS | 40.0% | |
| CTATGTCTACATGACAGTAC+AGG | + | chr8.3:12370563-12370582 | None:intergenic | 40.0% | |
| CTCTGCGTTCTGTGAATTTA+GGG | + | chr8.3:12367178-12367197 | None:intergenic | 40.0% | |
| CTGAGGTGATTATGATTGTG+TGG | - | chr8.3:12368374-12368393 | MS.gene59964:intron | 40.0% | |
| CTGCTGAGGTAAGTAATAAC+GGG | - | chr8.3:12367560-12367579 | MS.gene59964:CDS | 40.0% | |
| GATGAAGACGATCAAGATAG+TGG | + | chr8.3:12367331-12367350 | None:intergenic | 40.0% | |
| GCCAGAATGCATTGAATTTC+TGG | - | chr8.3:12369215-12369234 | MS.gene59964:CDS | 40.0% | |
| GCTCATGAGCTTAATATCCT+AGG | + | chr8.3:12369088-12369107 | None:intergenic | 40.0% | |
| GGTGAGAGAGAATTGGAATT+AGG | + | chr8.3:12367242-12367261 | None:intergenic | 40.0% | |
| GTATAGTCACTTAACCCATC+AGG | + | chr8.3:12371675-12371694 | None:intergenic | 40.0% | |
| GTCTGGGTTTGTATGATTTG+TGG | - | chr8.3:12369770-12369789 | MS.gene59964:intron | 40.0% | |
| GTGGAACATTAGATGATGTC+TGG | - | chr8.3:12369753-12369772 | MS.gene59964:intron | 40.0% | |
| GTTCACTGTATGTCTCTAGA+AGG | - | chr8.3:12370138-12370157 | MS.gene59964:intron | 40.0% | |
| TCATTCTGCCCTTAGGTAAT+CGG | - | chr8.3:12371339-12371358 | MS.gene59964:intron | 40.0% | |
| TCCCAAAGTGGATGGTATAA+AGG | - | chr8.3:12368946-12368965 | MS.gene59964:CDS | 40.0% | |
| TCTGCGTTCTGTGAATTTAG+GGG | + | chr8.3:12367177-12367196 | None:intergenic | 40.0% | |
| TGAAGACGATCAAGATAGTG+GGG | + | chr8.3:12367329-12367348 | None:intergenic | 40.0% | |
| TGCGTATTCCACTTGTATCA+GGG | + | chr8.3:12368459-12368478 | None:intergenic | 40.0% | |
| TGTTTACACATCACGTGTGA+CGG | + | chr8.3:12370637-12370656 | None:intergenic | 40.0% | |
| TTCACATTCCGAGTATTCCA+CGG | + | chr8.3:12368214-12368233 | None:intergenic | 40.0% | |
| TTTGCTTTCCGTGGAATACT+CGG | - | chr8.3:12368203-12368222 | MS.gene59964:intron | 40.0% | |
| ! | CTTAGAGCATCATGGGTATT+AGG | - | chr8.3:12368625-12368644 | MS.gene59964:intron | 40.0% |
| ! | TAACACGGGCTTTATGCATA+AGG | - | chr8.3:12370529-12370548 | MS.gene59964:intron | 40.0% |
| ! | TCACTGTATGTCTCTAGAAG+GGG | - | chr8.3:12370140-12370159 | MS.gene59964:intron | 40.0% |
| ! | TCGTGACAAGGTATTCGAAT+TGG | + | chr8.3:12369250-12369269 | None:intergenic | 40.0% |
| ! | TTAGGGGTTTTCTTGGGATT+GGG | + | chr8.3:12367161-12367180 | None:intergenic | 40.0% |
| ! | TTATGTCCATCGACTGAATC+AGG | - | chr8.3:12370077-12370096 | MS.gene59964:intron | 40.0% |
| ! | TTTAGGGGTTTTCTTGGGAT+TGG | + | chr8.3:12367162-12367181 | None:intergenic | 40.0% |
| ! | TTTCAAGTGAAGTCGTGACA+AGG | + | chr8.3:12369262-12369281 | None:intergenic | 40.0% |
| !! | GAGGTAAGTAATAACGGGTT+TGG | - | chr8.3:12367565-12367584 | MS.gene59964:CDS | 40.0% |
| !! | TCTCTGAAATCGTGGAGTTA+GGG | - | chr8.3:12370256-12370275 | MS.gene59964:intron | 40.0% |
| !! | TTCTCTGAAATCGTGGAGTT+AGG | - | chr8.3:12370255-12370274 | MS.gene59964:intron | 40.0% |
| !!! | CTGTTTTTCTTGCTGTTTCC+AGG | + | chr8.3:12371814-12371833 | None:intergenic | 40.0% |
| !!! | GGTTTTATTGGTAATGCACG+TGG | - | chr8.3:12369621-12369640 | MS.gene59964:intron | 40.0% |
| AAAAGATGCAACATGGGCGA+TGG | - | chr8.3:12369032-12369051 | MS.gene59964:intron | 45.0% | |
| AAAGATGCAACATGGGCGAT+GGG | - | chr8.3:12369033-12369052 | MS.gene59964:intron | 45.0% | |
| AAATCATACCACAGGTGCAC+AGG | + | chr8.3:12370494-12370513 | None:intergenic | 45.0% | |
| ACAAGGAAGGGCGGAAATTA+AGG | - | chr8.3:12369458-12369477 | MS.gene59964:intron | 45.0% | |
| ACATGGGCGATGGGAAAAAA+TGG | - | chr8.3:12369042-12369061 | MS.gene59964:intron | 45.0% | |
| ACCAAGATCCAAGCAAACAG+AGG | + | chr8.3:12368326-12368345 | None:intergenic | 45.0% | |
| AGACACTTCATTCTGCCCTT+AGG | - | chr8.3:12371332-12371351 | MS.gene59964:intron | 45.0% | |
| AGCGACAAGCTCACTTTAAG+TGG | - | chr8.3:12370385-12370404 | MS.gene59964:intron | 45.0% | |
| ATTTCTGTACAACCAGCTGG+AGG | + | chr8.3:12368252-12368271 | None:intergenic | 45.0% | |
| ATTTGGTAGGAACGATGGGA+TGG | - | chr8.3:12367450-12367469 | MS.gene59964:intron | 45.0% | |
| CCAAGATCCAAGCAAACAGA+GGG | + | chr8.3:12368325-12368344 | None:intergenic | 45.0% | |
| CCGTTATTACTTACCTCAGC+AGG | + | chr8.3:12367562-12367581 | None:intergenic | 45.0% | |
| CCTAAATTCACAGAACGCAG+AGG | - | chr8.3:12367176-12367195 | MS.gene59964:intron | 45.0% | |
| CCTCTGCGTTCTGTGAATTT+AGG | + | chr8.3:12367179-12367198 | None:intergenic | 45.0% | |
| CGCTGTCTTCAATTTCTCTG+AGG | - | chr8.3:12368357-12368376 | MS.gene59964:intron | 45.0% | |
| CGGAATGTGAAGAAGTTGCT+GGG | - | chr8.3:12368223-12368242 | MS.gene59964:intron | 45.0% | |
| GAATGAGAGGGTCCTTGATT+TGG | - | chr8.3:12371583-12371602 | MS.gene59964:intron | 45.0% | |
| GAGAAGAGGTGAGAGAGAAT+TGG | + | chr8.3:12367249-12367268 | None:intergenic | 45.0% | |
| GTGCGTATTCCACTTGTATC+AGG | + | chr8.3:12368460-12368479 | None:intergenic | 45.0% | |
| GTGGACATATTTGTCTTGCC+AGG | - | chr8.3:12368522-12368541 | MS.gene59964:intron | 45.0% | |
| TAGAATTGACGGCAAGTCGA+AGG | - | chr8.3:12370107-12370126 | MS.gene59964:intron | 45.0% | |
| TCGGAATGTGAAGAAGTTGC+TGG | - | chr8.3:12368222-12368241 | MS.gene59964:intron | 45.0% | |
| TGAAACTCACCCAAGCAAAC+TGG | + | chr8.3:12368285-12368304 | None:intergenic | 45.0% | |
| TGTTACCTTGACCATGAGGA+GGG | + | chr8.3:12369306-12369325 | None:intergenic | 45.0% | |
| TGTTTGAATCCCAGAGAGAC+TGG | - | chr8.3:12368432-12368451 | MS.gene59964:intron | 45.0% | |
| TTGAAGCGGTATGTTTCTCG+TGG | - | chr8.3:12370225-12370244 | MS.gene59964:intron | 45.0% | |
| TTGTTACCTTGACCATGAGG+AGG | + | chr8.3:12369307-12369326 | None:intergenic | 45.0% | |
| ! | AAAGCTCGTATCTGAAGCAG+TGG | - | chr8.3:12371181-12371200 | MS.gene59964:intron | 45.0% |
| ! | ACCAACATGTCCAGTTTGCT+TGG | - | chr8.3:12368272-12368291 | MS.gene59964:intron | 45.0% |
| ! | CAAGAAGTTTTCTCCTGCTG+AGG | - | chr8.3:12367546-12367565 | MS.gene59964:CDS | 45.0% |
| ! | CCAACATGTCCAGTTTGCTT+GGG | - | chr8.3:12368273-12368292 | MS.gene59964:intron | 45.0% |
| ! | CTGCCGATTATGTCAACAAC+AGG | - | chr8.3:12369706-12369725 | MS.gene59964:intron | 45.0% |
| ! | GGTATTTCTGTACAACCAGC+TGG | + | chr8.3:12368255-12368274 | None:intergenic | 45.0% |
| ! | TGCTTCGCTAACAAAAGCAC+TGG | - | chr8.3:12369600-12369619 | MS.gene59964:intron | 45.0% |
| !! | ATGTCCACTTTGAGACGCAA+GGG | + | chr8.3:12368510-12368529 | None:intergenic | 45.0% |
| !! | CGCAAGGGCATTGAAATGAA+TGG | + | chr8.3:12368495-12368514 | None:intergenic | 45.0% |
| !! | TATGTCCACTTTGAGACGCA+AGG | + | chr8.3:12368511-12368530 | None:intergenic | 45.0% |
| !! | TTCTTGCTGTTTCCAGGAGA+AGG | + | chr8.3:12371808-12371827 | None:intergenic | 45.0% |
| AACAAAAGCCTGTGCACCTG+TGG | - | chr8.3:12370483-12370502 | MS.gene59964:CDS | 50.0% | |
| AACAGAAGTCTGGTCGAAGG+CGG | - | chr8.3:12371829-12371848 | MS.gene59964:CDS | 50.0% | |
| AAGATGAGTTCGGGATCGAG+TGG | + | chr8.3:12367127-12367146 | None:intergenic | 50.0% | |
| AATGCCCTTGCGTCTCAAAG+TGG | - | chr8.3:12368503-12368522 | MS.gene59964:intron | 50.0% | |
| ACAGCGAGGATGAAGAGAAG+AGG | + | chr8.3:12367263-12367282 | None:intergenic | 50.0% | |
| AGACTGGACCCTGATACAAG+TGG | - | chr8.3:12368448-12368467 | MS.gene59964:intron | 50.0% | |
| ATCGTGACCCTCTGTTTGCT+TGG | - | chr8.3:12368315-12368334 | MS.gene59964:intron | 50.0% | |
| CCCAAGCAAACTGGACATGT+TGG | + | chr8.3:12368276-12368295 | None:intergenic | 50.0% | |
| CCCTCTGTTTGCTTGGATCT+TGG | - | chr8.3:12368322-12368341 | MS.gene59964:intron | 50.0% | |
| GAATGGGGAAGCTACATACC+TGG | + | chr8.3:12368543-12368562 | None:intergenic | 50.0% | |
| GGAACGATGGGATGGAAGAT+AGG | - | chr8.3:12367458-12367477 | MS.gene59964:intron | 50.0% | |
| GTGGATTTGTCGGATGTGGA+AGG | - | chr8.3:12369789-12369808 | MS.gene59964:intron | 50.0% | |
| GTTACCTTGACCATGAGGAG+GGG | + | chr8.3:12369305-12369324 | None:intergenic | 50.0% | |
| TATCAGGGTCCAGTCTCTCT+GGG | + | chr8.3:12368444-12368463 | None:intergenic | 50.0% | |
| TGGAGCGGAGAAGATGAGTT+CGG | + | chr8.3:12367137-12367156 | None:intergenic | 50.0% | |
| TTACCTTGACCATGAGGAGG+GGG | + | chr8.3:12369304-12369323 | None:intergenic | 50.0% | |
| ! | CGTATCTGAAGCAGTGGAGA+AGG | - | chr8.3:12371187-12371206 | MS.gene59964:intron | 50.0% |
| ! | GGGTTTTCTTGGGATTGGGT+TGG | + | chr8.3:12367157-12367176 | None:intergenic | 50.0% |
| !! | GGTCCTTGATTTGGAGGAAC+AGG | - | chr8.3:12371592-12371611 | MS.gene59964:intron | 50.0% |
| !! | TCAATGCATTCTGGCTCGCT+TGG | + | chr8.3:12369210-12369229 | None:intergenic | 50.0% |
| !! | TGAGAGGGTCCTTGATTTGG+AGG | - | chr8.3:12371586-12371605 | MS.gene59964:intron | 50.0% |
| !! | TTCTTGGGATTGGGTTGGAG+CGG | + | chr8.3:12367152-12367171 | None:intergenic | 50.0% |
| GAAGGTTGCTCATGAGCCAC+TGG | + | chr8.3:12371790-12371809 | None:intergenic | 55.0% | |
| GCTCATGAGCAACCTTCTCC+TGG | - | chr8.3:12371793-12371812 | MS.gene59964:CDS | 55.0% | |
| GGAGCGGAGAAGATGAGTTC+GGG | + | chr8.3:12367136-12367155 | None:intergenic | 55.0% | |
| GGAGGGAACAGTCTTACCAG+TGG | - | chr8.3:12371771-12371790 | MS.gene59964:CDS | 55.0% | |
| GTATCAGGGTCCAGTCTCTC+TGG | + | chr8.3:12368445-12368464 | None:intergenic | 55.0% | |
| GTGGAGAAGGCTGCAACTTC+TGG | - | chr8.3:12371200-12371219 | MS.gene59964:intron | 55.0% | |
| ! | GAGAGGAGTGTGAAGCGCTT+CGG | + | chr8.3:12367217-12367236 | None:intergenic | 55.0% |
| GGCTGCAACTTCTGGCATGC+TGG | - | chr8.3:12371208-12371227 | MS.gene59964:intron | 60.0% | |
| ! | ACCATGAGGAGGGGGTGCAA+AGG | + | chr8.3:12369296-12369315 | None:intergenic | 60.0% |
| ! | CGTCGTCGACTGAGTGGACT+CGG | + | chr8.3:12367100-12367119 | None:intergenic | 60.0% |
| ! | GGATCTCGTCGTCGACTGAG+TGG | + | chr8.3:12367106-12367125 | None:intergenic | 60.0% |
| GCACCCCCTCCTCATGGTCA+AGG | - | chr8.3:12369298-12369317 | MS.gene59964:intron | 65.0% | |
| GCCTTTGCACCCCCTCCTCA+TGG | - | chr8.3:12369292-12369311 | MS.gene59964:intron | 65.0% | |
| GTTGCTGGGACTCCTCCAGC+TGG | - | chr8.3:12368237-12368256 | MS.gene59964:intron | 65.0% | |
| ! | CGTCGACTGAGTGGACTCGG+AGG | + | chr8.3:12367097-12367116 | None:intergenic | 65.0% |
| ! | GAGGAGGGGGTGCAAAGGCA+AGG | + | chr8.3:12369291-12369310 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 12367086 | 12371873 | 12367086 | ID=MS.gene59964 |
| chr8.3 | mRNA | 12367086 | 12371873 | 12367086 | ID=MS.gene59964.t1;Parent=MS.gene59964 |
| chr8.3 | exon | 12371593 | 12371873 | 12371593 | ID=MS.gene59964.t1.exon1;Parent=MS.gene59964.t1 |
| chr8.3 | CDS | 12371593 | 12371873 | 12371593 | ID=cds.MS.gene59964.t1;Parent=MS.gene59964.t1 |
| chr8.3 | exon | 12371392 | 12371500 | 12371392 | ID=MS.gene59964.t1.exon2;Parent=MS.gene59964.t1 |
| chr8.3 | CDS | 12371392 | 12371500 | 12371392 | ID=cds.MS.gene59964.t1;Parent=MS.gene59964.t1 |
| chr8.3 | exon | 12370665 | 12370779 | 12370665 | ID=MS.gene59964.t1.exon3;Parent=MS.gene59964.t1 |
| chr8.3 | CDS | 12370665 | 12370779 | 12370665 | ID=cds.MS.gene59964.t1;Parent=MS.gene59964.t1 |
| chr8.3 | exon | 12370416 | 12370513 | 12370416 | ID=MS.gene59964.t1.exon4;Parent=MS.gene59964.t1 |
| chr8.3 | CDS | 12370416 | 12370513 | 12370416 | ID=cds.MS.gene59964.t1;Parent=MS.gene59964.t1 |
| chr8.3 | exon | 12369149 | 12369255 | 12369149 | ID=MS.gene59964.t1.exon5;Parent=MS.gene59964.t1 |
| chr8.3 | CDS | 12369149 | 12369255 | 12369149 | ID=cds.MS.gene59964.t1;Parent=MS.gene59964.t1 |
| chr8.3 | exon | 12368723 | 12368972 | 12368723 | ID=MS.gene59964.t1.exon6;Parent=MS.gene59964.t1 |
| chr8.3 | CDS | 12368723 | 12368972 | 12368723 | ID=cds.MS.gene59964.t1;Parent=MS.gene59964.t1 |
| chr8.3 | exon | 12368129 | 12368182 | 12368129 | ID=MS.gene59964.t1.exon7;Parent=MS.gene59964.t1 |
| chr8.3 | CDS | 12368129 | 12368182 | 12368129 | ID=cds.MS.gene59964.t1;Parent=MS.gene59964.t1 |
| chr8.3 | exon | 12367676 | 12367774 | 12367676 | ID=MS.gene59964.t1.exon8;Parent=MS.gene59964.t1 |
| chr8.3 | CDS | 12367676 | 12367774 | 12367676 | ID=cds.MS.gene59964.t1;Parent=MS.gene59964.t1 |
| chr8.3 | exon | 12367543 | 12367594 | 12367543 | ID=MS.gene59964.t1.exon9;Parent=MS.gene59964.t1 |
| chr8.3 | CDS | 12367543 | 12367594 | 12367543 | ID=cds.MS.gene59964.t1;Parent=MS.gene59964.t1 |
| chr8.3 | exon | 12367346 | 12367395 | 12367346 | ID=MS.gene59964.t1.exon10;Parent=MS.gene59964.t1 |
| chr8.3 | CDS | 12367346 | 12367395 | 12367346 | ID=cds.MS.gene59964.t1;Parent=MS.gene59964.t1 |
| chr8.3 | exon | 12367086 | 12367187 | 12367086 | ID=MS.gene59964.t1.exon11;Parent=MS.gene59964.t1 |
| chr8.3 | CDS | 12367086 | 12367187 | 12367086 | ID=cds.MS.gene59964.t1;Parent=MS.gene59964.t1 |
| Gene Sequence |
| Protein sequence |
