Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60025.t1 | XP_003604379.2 | 98.7 | 391 | 5 | 0 | 1 | 391 | 8 | 398 | 2.80E-220 | 774.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60025.t1 | Q9FHX5 | 47.3 | 364 | 181 | 5 | 3 | 363 | 1 | 356 | 1.4e-87 | 324.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60025.t1 | G7JGY3 | 98.7 | 391 | 5 | 0 | 1 | 391 | 1 | 391 | 2.0e-220 | 774.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene054429 | MS.gene60025 | 0.818706 | 1.70E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60025.t1 | MTR_4g010200 | 98.721 | 391 | 5 | 0 | 1 | 391 | 1 | 391 | 0.0 | 794 |
MS.gene60025.t1 | MTR_4g114850 | 60.326 | 368 | 139 | 2 | 27 | 389 | 20 | 385 | 3.50e-162 | 460 |
MS.gene60025.t1 | MTR_4g114850 | 62.791 | 344 | 126 | 1 | 27 | 370 | 20 | 361 | 8.35e-159 | 451 |
MS.gene60025.t1 | MTR_4g114850 | 62.865 | 342 | 125 | 1 | 27 | 368 | 20 | 359 | 1.14e-158 | 451 |
MS.gene60025.t1 | MTR_4g084480 | 48.529 | 340 | 174 | 1 | 28 | 367 | 27 | 365 | 1.36e-118 | 350 |
MS.gene60025.t1 | MTR_4g084480 | 48.529 | 340 | 174 | 1 | 28 | 367 | 20 | 358 | 2.12e-118 | 349 |
MS.gene60025.t1 | MTR_4g084480 | 45.187 | 374 | 187 | 2 | 28 | 384 | 27 | 399 | 2.70e-118 | 349 |
MS.gene60025.t1 | MTR_1g077990 | 52.160 | 324 | 153 | 2 | 30 | 353 | 28 | 349 | 5.13e-117 | 346 |
MS.gene60025.t1 | MTR_2g086530 | 44.722 | 360 | 188 | 4 | 1 | 358 | 1 | 351 | 1.69e-113 | 337 |
MS.gene60025.t1 | MTR_2g086530 | 46.341 | 328 | 169 | 2 | 33 | 358 | 8 | 330 | 1.91e-112 | 333 |
MS.gene60025.t1 | MTR_4g052970 | 45.000 | 340 | 183 | 2 | 32 | 368 | 28 | 366 | 9.86e-109 | 324 |
MS.gene60025.t1 | MTR_2g019345 | 48.903 | 319 | 161 | 2 | 33 | 351 | 24 | 340 | 7.44e-108 | 323 |
MS.gene60025.t1 | MTR_5g085580 | 46.914 | 324 | 170 | 2 | 31 | 353 | 23 | 345 | 2.25e-98 | 301 |
MS.gene60025.t1 | MTR_1g056640 | 43.014 | 365 | 197 | 4 | 31 | 385 | 36 | 399 | 1.88e-96 | 296 |
MS.gene60025.t1 | MTR_4g069940 | 42.614 | 352 | 198 | 2 | 1 | 352 | 1 | 348 | 2.38e-96 | 295 |
MS.gene60025.t1 | MTR_1g022160 | 44.237 | 321 | 178 | 1 | 34 | 353 | 25 | 345 | 1.70e-94 | 289 |
MS.gene60025.t1 | MTR_3g116510 | 42.609 | 345 | 194 | 2 | 8 | 352 | 7 | 347 | 7.95e-94 | 289 |
MS.gene60025.t1 | MTR_1g022160 | 44.237 | 321 | 178 | 1 | 34 | 353 | 25 | 345 | 9.81e-94 | 289 |
MS.gene60025.t1 | MTR_1g022160 | 44.237 | 321 | 178 | 1 | 34 | 353 | 25 | 345 | 1.57e-93 | 288 |
MS.gene60025.t1 | MTR_1g022160 | 44.237 | 321 | 178 | 1 | 34 | 353 | 25 | 345 | 1.97e-93 | 288 |
MS.gene60025.t1 | MTR_7g053500 | 42.378 | 328 | 184 | 4 | 34 | 357 | 27 | 353 | 6.84e-93 | 286 |
MS.gene60025.t1 | MTR_8g012400 | 40.456 | 351 | 202 | 5 | 11 | 357 | 9 | 356 | 1.20e-92 | 286 |
MS.gene60025.t1 | MTR_3g080410 | 45.092 | 326 | 175 | 3 | 34 | 356 | 27 | 351 | 2.43e-91 | 279 |
MS.gene60025.t1 | MTR_6g088885 | 38.786 | 379 | 228 | 3 | 10 | 386 | 5 | 381 | 9.16e-90 | 280 |
MS.gene60025.t1 | MTR_1g007810 | 42.453 | 318 | 176 | 4 | 34 | 349 | 17 | 329 | 9.95e-89 | 273 |
MS.gene60025.t1 | MTR_4g088155 | 36.111 | 360 | 217 | 5 | 22 | 369 | 12 | 370 | 2.81e-80 | 254 |
MS.gene60025.t1 | MTR_3g065460 | 39.710 | 345 | 201 | 3 | 13 | 354 | 7 | 347 | 1.00e-77 | 248 |
MS.gene60025.t1 | MTR_7g026340 | 40.938 | 320 | 180 | 7 | 34 | 351 | 24 | 336 | 6.35e-76 | 242 |
MS.gene60025.t1 | MTR_1g031900 | 40.123 | 324 | 190 | 2 | 34 | 354 | 25 | 347 | 1.41e-75 | 243 |
MS.gene60025.t1 | MTR_1g031900 | 40.123 | 324 | 190 | 2 | 34 | 354 | 25 | 347 | 1.59e-75 | 243 |
MS.gene60025.t1 | MTR_7g053500 | 43.116 | 276 | 152 | 4 | 86 | 357 | 2 | 276 | 2.08e-75 | 239 |
MS.gene60025.t1 | MTR_1g052430 | 41.033 | 329 | 186 | 5 | 34 | 362 | 33 | 353 | 1.02e-73 | 235 |
MS.gene60025.t1 | MTR_5g078200 | 38.329 | 347 | 208 | 3 | 11 | 354 | 3 | 346 | 2.76e-72 | 238 |
MS.gene60025.t1 | MTR_3g083580 | 38.040 | 347 | 204 | 6 | 11 | 353 | 10 | 349 | 6.38e-72 | 233 |
MS.gene60025.t1 | MTR_4g076500 | 39.103 | 312 | 181 | 3 | 34 | 345 | 79 | 381 | 8.91e-72 | 230 |
MS.gene60025.t1 | MTR_4g132280 | 37.538 | 325 | 199 | 2 | 34 | 355 | 46 | 369 | 1.17e-71 | 233 |
MS.gene60025.t1 | MTR_5g078200 | 39.172 | 314 | 187 | 2 | 44 | 354 | 1 | 313 | 7.81e-70 | 231 |
MS.gene60025.t1 | MTR_4g076440 | 37.391 | 345 | 197 | 7 | 9 | 353 | 4 | 329 | 1.12e-69 | 222 |
MS.gene60025.t1 | MTR_8g012400 | 40.433 | 277 | 160 | 4 | 86 | 358 | 2 | 277 | 1.12e-69 | 224 |
MS.gene60025.t1 | MTR_7g081350 | 38.304 | 342 | 194 | 7 | 8 | 348 | 8 | 333 | 1.24e-69 | 223 |
MS.gene60025.t1 | MTR_2g034480 | 38.580 | 324 | 190 | 6 | 34 | 356 | 28 | 343 | 1.73e-69 | 223 |
MS.gene60025.t1 | MTR_8g085720 | 36.522 | 345 | 210 | 4 | 13 | 354 | 11 | 349 | 1.84e-69 | 227 |
MS.gene60025.t1 | MTR_8g102340 | 35.977 | 353 | 191 | 3 | 34 | 386 | 29 | 346 | 6.39e-69 | 225 |
MS.gene60025.t1 | MTR_4g083500 | 40.122 | 329 | 191 | 6 | 34 | 360 | 45 | 369 | 7.79e-69 | 226 |
MS.gene60025.t1 | MTR_4g076470 | 39.185 | 319 | 180 | 6 | 34 | 352 | 24 | 328 | 9.79e-69 | 220 |
MS.gene60025.t1 | MTR_4g076490 | 38.415 | 328 | 183 | 6 | 32 | 356 | 96 | 407 | 4.97e-68 | 221 |
MS.gene60025.t1 | MTR_4g076255 | 39.571 | 326 | 181 | 7 | 29 | 352 | 19 | 330 | 1.01e-67 | 218 |
MS.gene60025.t1 | MTR_4g076570 | 38.166 | 338 | 197 | 6 | 30 | 363 | 16 | 345 | 1.42e-67 | 218 |
MS.gene60025.t1 | MTR_4g076430 | 38.125 | 320 | 184 | 6 | 34 | 353 | 24 | 329 | 8.52e-67 | 215 |
MS.gene60025.t1 | MTR_2g034470 | 36.957 | 322 | 194 | 6 | 34 | 354 | 31 | 344 | 6.58e-63 | 206 |
MS.gene60025.t1 | MTR_2g034440 | 37.383 | 321 | 191 | 7 | 34 | 352 | 23 | 335 | 4.62e-62 | 203 |
MS.gene60025.t1 | MTR_3g116510 | 46.948 | 213 | 113 | 0 | 140 | 352 | 1 | 213 | 9.65e-62 | 202 |
MS.gene60025.t1 | MTR_2g034470 | 36.392 | 316 | 192 | 6 | 40 | 354 | 2 | 309 | 1.17e-60 | 199 |
MS.gene60025.t1 | MTR_7g081370 | 35.224 | 335 | 195 | 6 | 14 | 348 | 9 | 321 | 1.60e-60 | 199 |
MS.gene60025.t1 | MTR_4g124440 | 35.890 | 365 | 201 | 12 | 5 | 356 | 7 | 351 | 1.11e-59 | 201 |
MS.gene60025.t1 | MTR_1g010120 | 36.311 | 347 | 203 | 10 | 10 | 350 | 9 | 343 | 2.45e-55 | 189 |
MS.gene60025.t1 | MTR_8g092070 | 33.803 | 355 | 220 | 11 | 7 | 354 | 9 | 355 | 8.65e-55 | 190 |
MS.gene60025.t1 | MTR_4g112025 | 32.877 | 365 | 227 | 12 | 1 | 356 | 1 | 356 | 2.91e-51 | 179 |
MS.gene60025.t1 | MTR_1g053320 | 32.778 | 360 | 222 | 12 | 4 | 354 | 6 | 354 | 3.82e-51 | 178 |
MS.gene60025.t1 | MTR_6g032820 | 35.756 | 344 | 191 | 14 | 14 | 344 | 14 | 340 | 6.55e-51 | 177 |
MS.gene60025.t1 | MTR_7g085390 | 33.428 | 353 | 216 | 12 | 12 | 354 | 5 | 348 | 2.10e-50 | 176 |
MS.gene60025.t1 | MTR_2g027560 | 33.333 | 324 | 204 | 9 | 34 | 350 | 29 | 347 | 2.44e-48 | 171 |
MS.gene60025.t1 | MTR_3g031770 | 35.093 | 322 | 197 | 8 | 34 | 350 | 28 | 342 | 2.51e-48 | 171 |
MS.gene60025.t1 | MTR_3g095050 | 32.861 | 353 | 216 | 14 | 11 | 354 | 13 | 353 | 9.91e-45 | 161 |
MS.gene60025.t1 | MTR_3g108600 | 33.746 | 323 | 183 | 10 | 34 | 350 | 32 | 329 | 5.22e-44 | 159 |
MS.gene60025.t1 | MTR_5g081720 | 33.553 | 304 | 190 | 8 | 50 | 349 | 54 | 349 | 1.34e-41 | 150 |
MS.gene60025.t1 | MTR_4g134280 | 34.894 | 235 | 137 | 9 | 121 | 348 | 3 | 228 | 3.59e-31 | 122 |
MS.gene60025.t1 | MTR_4g036775 | 40.566 | 106 | 58 | 2 | 256 | 361 | 86 | 186 | 1.33e-17 | 81.3 |
MS.gene60025.t1 | MTR_4g036680 | 42.056 | 107 | 55 | 4 | 256 | 361 | 86 | 186 | 1.77e-17 | 81.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60025.t1 | AT3G15800 | 73.731 | 335 | 87 | 1 | 28 | 361 | 38 | 372 | 0.0 | 515 |
MS.gene60025.t1 | AT2G26600 | 59.557 | 361 | 145 | 1 | 28 | 388 | 29 | 388 | 4.71e-160 | 455 |
MS.gene60025.t1 | AT2G26600 | 59.310 | 290 | 117 | 1 | 99 | 388 | 6 | 294 | 4.45e-127 | 368 |
MS.gene60025.t1 | AT4G18340 | 45.225 | 356 | 190 | 3 | 13 | 367 | 16 | 367 | 1.52e-110 | 330 |
MS.gene60025.t1 | AT4G18340 | 44.262 | 366 | 199 | 3 | 13 | 377 | 16 | 377 | 1.67e-110 | 329 |
MS.gene60025.t1 | AT2G27500 | 44.868 | 341 | 188 | 0 | 34 | 374 | 30 | 370 | 5.34e-110 | 327 |
MS.gene60025.t1 | AT2G27500 | 44.068 | 354 | 198 | 0 | 34 | 387 | 30 | 383 | 1.09e-109 | 327 |
MS.gene60025.t1 | AT5G42100 | 48.368 | 337 | 166 | 4 | 18 | 351 | 16 | 347 | 6.00e-109 | 326 |
MS.gene60025.t1 | AT1G30080 | 49.057 | 318 | 161 | 1 | 34 | 351 | 37 | 353 | 1.02e-108 | 324 |
MS.gene60025.t1 | AT5G42100 | 48.368 | 337 | 166 | 4 | 18 | 351 | 16 | 347 | 1.05e-108 | 326 |
MS.gene60025.t1 | AT1G30080 | 49.057 | 318 | 161 | 1 | 34 | 351 | 37 | 353 | 2.42e-108 | 324 |
MS.gene60025.t1 | AT1G32860 | 47.678 | 323 | 166 | 2 | 32 | 352 | 28 | 349 | 1.18e-105 | 318 |
MS.gene60025.t1 | AT4G26830 | 45.559 | 349 | 183 | 3 | 6 | 353 | 2 | 344 | 2.27e-99 | 303 |
MS.gene60025.t1 | AT4G26830 | 46.769 | 325 | 170 | 2 | 30 | 353 | 26 | 348 | 1.41e-97 | 298 |
MS.gene60025.t1 | AT2G16230 | 44.848 | 330 | 182 | 0 | 34 | 363 | 26 | 355 | 2.42e-97 | 299 |
MS.gene60025.t1 | AT2G05790 | 47.112 | 329 | 170 | 3 | 31 | 356 | 23 | 350 | 7.58e-97 | 297 |
MS.gene60025.t1 | AT4G34480 | 46.626 | 326 | 174 | 0 | 34 | 359 | 27 | 352 | 1.16e-96 | 293 |
MS.gene60025.t1 | AT5G42720 | 47.040 | 321 | 169 | 1 | 34 | 353 | 27 | 347 | 1.27e-96 | 295 |
MS.gene60025.t1 | AT4G34480 | 47.022 | 319 | 169 | 0 | 34 | 352 | 27 | 345 | 5.73e-94 | 291 |
MS.gene60025.t1 | AT5G24318 | 41.667 | 348 | 185 | 7 | 13 | 358 | 19 | 350 | 5.92e-94 | 286 |
MS.gene60025.t1 | AT5G55180 | 43.465 | 329 | 182 | 3 | 28 | 354 | 22 | 348 | 4.19e-93 | 287 |
MS.gene60025.t1 | AT5G55180 | 43.465 | 329 | 182 | 3 | 28 | 354 | 22 | 348 | 6.03e-93 | 286 |
MS.gene60025.t1 | AT2G27500 | 44.408 | 304 | 169 | 0 | 84 | 387 | 2 | 305 | 9.44e-93 | 281 |
MS.gene60025.t1 | AT5G24318 | 41.477 | 352 | 188 | 7 | 13 | 362 | 19 | 354 | 4.05e-92 | 284 |
MS.gene60025.t1 | AT5G24318 | 41.477 | 352 | 188 | 7 | 13 | 362 | 19 | 354 | 8.80e-92 | 283 |
MS.gene60025.t1 | AT3G07320 | 40.909 | 330 | 190 | 4 | 29 | 354 | 21 | 349 | 9.48e-89 | 276 |
MS.gene60025.t1 | AT5G56590 | 40.854 | 328 | 193 | 1 | 28 | 354 | 21 | 348 | 6.72e-87 | 272 |
MS.gene60025.t1 | AT2G01630 | 40.432 | 324 | 189 | 2 | 34 | 354 | 24 | 346 | 7.35e-81 | 253 |
MS.gene60025.t1 | AT2G01630 | 40.432 | 324 | 189 | 2 | 34 | 354 | 24 | 346 | 2.39e-80 | 253 |
MS.gene60025.t1 | AT3G23770 | 37.015 | 335 | 204 | 4 | 28 | 356 | 32 | 365 | 1.50e-79 | 253 |
MS.gene60025.t1 | AT2G01630 | 40.432 | 324 | 189 | 2 | 34 | 354 | 24 | 346 | 2.32e-79 | 253 |
MS.gene60025.t1 | AT4G29360 | 42.056 | 321 | 185 | 1 | 34 | 354 | 38 | 357 | 5.02e-79 | 253 |
MS.gene60025.t1 | AT4G29360 | 42.056 | 321 | 185 | 1 | 34 | 354 | 28 | 347 | 5.03e-79 | 253 |
MS.gene60025.t1 | AT4G14080 | 37.082 | 329 | 199 | 5 | 34 | 357 | 43 | 368 | 2.62e-77 | 247 |
MS.gene60025.t1 | AT3G13560 | 40.303 | 330 | 190 | 4 | 22 | 348 | 18 | 343 | 6.06e-74 | 239 |
MS.gene60025.t1 | AT3G13560 | 40.303 | 330 | 190 | 4 | 22 | 348 | 18 | 343 | 6.06e-74 | 239 |
MS.gene60025.t1 | AT3G13560 | 40.303 | 330 | 190 | 4 | 22 | 348 | 18 | 343 | 6.06e-74 | 239 |
MS.gene60025.t1 | AT3G13560 | 40.303 | 330 | 190 | 4 | 22 | 348 | 18 | 343 | 6.06e-74 | 239 |
MS.gene60025.t1 | AT3G13560 | 40.303 | 330 | 190 | 4 | 22 | 348 | 18 | 343 | 6.06e-74 | 239 |
MS.gene60025.t1 | AT1G11820 | 37.463 | 339 | 204 | 3 | 34 | 369 | 45 | 378 | 1.75e-72 | 231 |
MS.gene60025.t1 | AT1G66250 | 38.838 | 327 | 194 | 4 | 31 | 353 | 29 | 353 | 1.04e-71 | 233 |
MS.gene60025.t1 | AT1G11820 | 35.593 | 354 | 212 | 4 | 34 | 384 | 45 | 385 | 1.49e-70 | 229 |
MS.gene60025.t1 | AT3G46570 | 40.111 | 359 | 190 | 13 | 2 | 351 | 1 | 343 | 1.64e-70 | 225 |
MS.gene60025.t1 | AT1G11820 | 37.346 | 324 | 199 | 2 | 34 | 354 | 45 | 367 | 3.14e-70 | 229 |
MS.gene60025.t1 | AT3G61810 | 34.663 | 326 | 198 | 4 | 34 | 353 | 56 | 372 | 1.33e-67 | 218 |
MS.gene60025.t1 | AT5G20390 | 38.835 | 309 | 179 | 6 | 34 | 341 | 34 | 333 | 6.27e-67 | 216 |
MS.gene60025.t1 | AT4G34480 | 49.569 | 232 | 117 | 0 | 121 | 352 | 3 | 234 | 3.13e-66 | 216 |
MS.gene60025.t1 | AT4G16260 | 34.286 | 350 | 217 | 6 | 13 | 360 | 4 | 342 | 1.01e-64 | 210 |
MS.gene60025.t1 | AT3G57270 | 36.533 | 323 | 196 | 5 | 31 | 352 | 25 | 339 | 2.12e-64 | 209 |
MS.gene60025.t1 | AT1G77780 | 36.283 | 339 | 202 | 8 | 13 | 350 | 7 | 332 | 1.52e-63 | 207 |
MS.gene60025.t1 | AT3G57260 | 35.088 | 342 | 207 | 7 | 11 | 352 | 12 | 338 | 1.49e-62 | 204 |
MS.gene60025.t1 | AT3G57260 | 35.072 | 345 | 203 | 8 | 11 | 352 | 28 | 354 | 2.38e-62 | 204 |
MS.gene60025.t1 | AT2G39640 | 36.232 | 345 | 207 | 8 | 8 | 351 | 7 | 339 | 5.16e-62 | 209 |
MS.gene60025.t1 | AT3G55430 | 38.344 | 326 | 182 | 12 | 34 | 352 | 30 | 343 | 4.88e-61 | 204 |
MS.gene60025.t1 | AT4G16260 | 34.365 | 323 | 199 | 6 | 40 | 360 | 2 | 313 | 6.54e-61 | 199 |
MS.gene60025.t1 | AT5G20340 | 36.246 | 309 | 187 | 6 | 34 | 341 | 44 | 343 | 3.42e-59 | 196 |
MS.gene60025.t1 | AT1G77790 | 37.188 | 320 | 189 | 7 | 34 | 350 | 31 | 341 | 4.74e-58 | 193 |
MS.gene60025.t1 | AT5G20330 | 36.570 | 309 | 186 | 6 | 34 | 341 | 35 | 334 | 1.49e-57 | 191 |
MS.gene60025.t1 | AT5G24318 | 43.636 | 220 | 117 | 3 | 144 | 362 | 2 | 215 | 2.58e-57 | 190 |
MS.gene60025.t1 | AT1G33220 | 34.337 | 332 | 208 | 6 | 1 | 330 | 1 | 324 | 1.06e-56 | 189 |
MS.gene60025.t1 | AT5G64790 | 34.857 | 350 | 212 | 10 | 13 | 354 | 8 | 349 | 1.75e-56 | 192 |
MS.gene60025.t1 | AT3G57240 | 34.194 | 310 | 190 | 6 | 31 | 340 | 33 | 328 | 1.71e-54 | 183 |
MS.gene60025.t1 | AT5G20870 | 36.310 | 336 | 197 | 10 | 34 | 357 | 31 | 361 | 2.10e-53 | 185 |
MS.gene60025.t1 | AT4G31140 | 35.030 | 334 | 202 | 10 | 34 | 358 | 28 | 355 | 2.20e-51 | 179 |
MS.gene60025.t1 | AT1G64760 | 34.844 | 353 | 209 | 12 | 13 | 354 | 4 | 346 | 6.93e-51 | 177 |
MS.gene60025.t1 | AT1G64760 | 34.844 | 353 | 209 | 12 | 13 | 354 | 4 | 346 | 6.93e-51 | 177 |
MS.gene60025.t1 | AT2G19440 | 35.758 | 330 | 194 | 12 | 34 | 354 | 22 | 342 | 2.34e-49 | 173 |
MS.gene60025.t1 | AT2G19440 | 35.758 | 330 | 194 | 12 | 34 | 354 | 22 | 342 | 2.34e-49 | 173 |
MS.gene60025.t1 | AT5G20560 | 33.036 | 336 | 212 | 7 | 11 | 341 | 8 | 335 | 2.76e-49 | 170 |
MS.gene60025.t1 | AT3G04010 | 35.152 | 330 | 196 | 11 | 34 | 354 | 34 | 354 | 5.30e-48 | 170 |
MS.gene60025.t1 | AT5G18220 | 32.213 | 357 | 221 | 11 | 4 | 354 | 8 | 349 | 5.99e-48 | 170 |
MS.gene60025.t1 | AT5G58090 | 32.945 | 343 | 214 | 10 | 34 | 370 | 23 | 355 | 8.47e-48 | 169 |
MS.gene60025.t1 | AT3G24330 | 33.631 | 336 | 203 | 12 | 30 | 354 | 36 | 362 | 2.99e-47 | 168 |
MS.gene60025.t1 | AT5G58480 | 33.432 | 338 | 203 | 11 | 28 | 352 | 17 | 345 | 3.77e-45 | 162 |
MS.gene60025.t1 | AT4G17180 | 32.571 | 350 | 209 | 13 | 20 | 356 | 12 | 347 | 1.14e-43 | 158 |
MS.gene60025.t1 | AT3G55780 | 31.847 | 314 | 199 | 9 | 47 | 353 | 49 | 354 | 1.88e-41 | 150 |
Find 70 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACCATCTTCATGTACATTT+AGG | 0.162171 | 4.3:+86456654 | MS.gene60025:CDS |
CCTCGTGTTCATTCTTTCTT+TGG | 0.185604 | 4.3:+86455679 | MS.gene60025:CDS |
GCATATGATATTGGATTTAC+TGG | 0.223242 | 4.3:+86457169 | MS.gene60025:CDS |
AATTATAAATTGCAGGGAAT+TGG | 0.233656 | 4.3:+86458031 | MS.gene60025:intron |
CTCCTCTTTCCTTTCCTTCA+AGG | 0.250370 | 4.3:+86457213 | MS.gene60025:CDS |
GTGGTGGAAATATTGAAGTT+TGG | 0.257640 | 4.3:+86456516 | MS.gene60025:CDS |
AGAAGTGTAACCACACTTTC+AGG | 0.271942 | 4.3:-86456269 | None:intergenic |
GTCATAATGTAGTTTACTTT+TGG | 0.276964 | 4.3:-86456837 | None:intergenic |
GGGTATGCATTTATATAAAA+AGG | 0.279248 | 4.3:-86456734 | None:intergenic |
ATTGTCTTTAATCCAGTTCA+TGG | 0.298902 | 4.3:-86456432 | None:intergenic |
ACCATCTTCATGTACATTTA+GGG | 0.319187 | 4.3:+86456655 | MS.gene60025:CDS |
GGAAGTATTGCATATGATAT+TGG | 0.322050 | 4.3:+86457160 | MS.gene60025:CDS |
ATAGGCCTAAAATGTTGGTT+AGG | 0.346325 | 4.3:+86457056 | MS.gene60025:CDS |
GAAATTTGGGTTTGATAAGA+TGG | 0.348519 | 4.3:+86456904 | MS.gene60025:CDS |
TGGTGGAAATATTGAAGTTT+GGG | 0.349355 | 4.3:+86456517 | MS.gene60025:CDS |
ACCTTACATGAAACCTTTGT+TGG | 0.369026 | 4.3:+86456688 | MS.gene60025:CDS |
ATTATAAATTGCAGGGAATT+GGG | 0.372588 | 4.3:+86458032 | MS.gene60025:intron |
TTAGGGAACAAAGCATTTAC+AGG | 0.386581 | 4.3:+86456200 | MS.gene60025:CDS |
TGTCTTTCTGATCCTGGTCC+AGG | 0.404190 | 4.3:-86457115 | None:intergenic |
GATTGTTTCTGAGACTGGTT+GGG | 0.414418 | 4.3:+86456931 | MS.gene60025:CDS |
TCCAACAAAGGTTTCATGTA+AGG | 0.416560 | 4.3:-86456689 | None:intergenic |
CTAAGTGCCTTCAAAGGATC+TGG | 0.417558 | 4.3:+86456344 | MS.gene60025:CDS |
GCGAAGATCGAGCCATGAAC+TGG | 0.421344 | 4.3:+86456420 | MS.gene60025:CDS |
AAAGCATTTACAGGAACATA+TGG | 0.426078 | 4.3:+86456209 | MS.gene60025:CDS |
AAAGAGGAGGTTGCTGAGGA+AGG | 0.428554 | 4.3:-86457199 | None:intergenic |
CAGATCCTTTGAAGGCACTT+AGG | 0.437728 | 4.3:-86456343 | None:intergenic |
TCCTATTCCAGATCCTTTGA+AGG | 0.453072 | 4.3:-86456351 | None:intergenic |
AGAGAAAAGGAACACCTCAT+AGG | 0.455796 | 4.3:+86457038 | MS.gene60025:CDS |
TTCAATGAGAATTTGAAGCC+TGG | 0.457788 | 4.3:+86457097 | MS.gene60025:CDS |
AAAATAGTTGGAATTGCCAT+TGG | 0.458980 | 4.3:+86456479 | MS.gene60025:CDS |
TAGGCCTAAAATGTTGGTTA+GGG | 0.461164 | 4.3:+86457057 | MS.gene60025:CDS |
CCAAAGTGTCTTTCTGATCC+TGG | 0.464550 | 4.3:-86457121 | None:intergenic |
TTTGGATTATTTAATCATGA+TGG | 0.466918 | 4.3:+86457139 | MS.gene60025:CDS |
AAGAGGTTACTTAAGAGAAA+AGG | 0.468730 | 4.3:+86457025 | MS.gene60025:CDS |
AATGTTCAACCATATCTTCC+AGG | 0.475716 | 4.3:+86456452 | MS.gene60025:CDS |
GCCTTCAAAGGATCTGGAAT+AGG | 0.476160 | 4.3:+86456350 | MS.gene60025:CDS |
GGAACATATGGAGTAAACTA+TGG | 0.476388 | 4.3:+86456221 | MS.gene60025:CDS |
GAAGTGTAACCACACTTTCA+GGG | 0.479495 | 4.3:-86456268 | None:intergenic |
ACCTAAAATTTCATTTCCAA+TGG | 0.483236 | 4.3:-86456495 | None:intergenic |
TTGCTAGGCCAAGTCTATCA+AGG | 0.491645 | 4.3:-86456577 | None:intergenic |
AAATGGATTACATACCTTGA+AGG | 0.496423 | 4.3:-86457227 | None:intergenic |
GAAGTGATTGTTTCTGAGAC+TGG | 0.499216 | 4.3:+86456926 | MS.gene60025:CDS |
AATTGGGTCTTCATACATGA+TGG | 0.501687 | 4.3:+86458048 | MS.gene60025:CDS |
AAAGTACCTACCTAGAGAAA+AGG | 0.503724 | 4.3:-86455721 | None:intergenic |
TGATTGTTTCTGAGACTGGT+TGG | 0.504115 | 4.3:+86456930 | MS.gene60025:CDS |
GAGACTGGTTGGGCCTCTCA+TGG | 0.506281 | 4.3:+86456941 | MS.gene60025:CDS |
ATGTCTGTCAAAAGTTCGTT+CGG | 0.507994 | 4.3:-86456389 | None:intergenic |
AAACCTCAATTTGCTTTGCT+AGG | 0.509251 | 4.3:-86456592 | None:intergenic |
GAGAATTTGAAGCCTGGACC+AGG | 0.516130 | 4.3:+86457103 | MS.gene60025:CDS |
AAGGAAAGAGGAGGTTGCTG+AGG | 0.517100 | 4.3:-86457203 | None:intergenic |
GCAAATACAGCTTCTGAATG+TGG | 0.522800 | 4.3:-86456620 | None:intergenic |
TGGCCTAGCAAAGCAAATTG+AGG | 0.526445 | 4.3:+86456589 | MS.gene60025:CDS |
CATGGTGATGATAATGAAGC+TGG | 0.527812 | 4.3:+86456959 | MS.gene60025:CDS |
TTGAAGGCACTTAGGACTTG+AGG | 0.530321 | 4.3:-86456335 | None:intergenic |
AGTTTATGTCAATATGTTGA+GGG | 0.534313 | 4.3:-86456778 | None:intergenic |
CCAGGATCAGAAAGACACTT+TGG | 0.537832 | 4.3:+86457121 | MS.gene60025:CDS |
TCCCTAAATGTACATGAAGA+TGG | 0.548834 | 4.3:-86456656 | None:intergenic |
TAGTTTATGTCAATATGTTG+AGG | 0.553478 | 4.3:-86456779 | None:intergenic |
ACCTCATAGGCCTAAAATGT+TGG | 0.556828 | 4.3:+86457051 | MS.gene60025:CDS |
TACCTTGAAGGAAAGGAAAG+AGG | 0.559282 | 4.3:-86457215 | None:intergenic |
TATAGTGCCCTTGATAGACT+TGG | 0.566519 | 4.3:+86456569 | MS.gene60025:CDS |
GATTACATACCTTGAAGGAA+AGG | 0.568225 | 4.3:-86457222 | None:intergenic |
TTCATTATCATCACCATGAG+AGG | 0.570975 | 4.3:-86456954 | None:intergenic |
CAAGTCCTAAGTGCCTTCAA+AGG | 0.599078 | 4.3:+86456338 | MS.gene60025:CDS |
AAGTGTAACCACACTTTCAG+GGG | 0.600505 | 4.3:-86456267 | None:intergenic |
TGCTAGGCCAAGTCTATCAA+GGG | 0.613695 | 4.3:-86456576 | None:intergenic |
CTAAATGTACATGAAGATGG+TGG | 0.619425 | 4.3:-86456653 | None:intergenic |
CCAAAGAAAGAATGAACACG+AGG | 0.636038 | 4.3:-86455679 | None:intergenic |
CTTGAAGGAAAGGAAAGAGG+AGG | 0.672696 | 4.3:-86457212 | None:intergenic |
AGTGTAACCACACTTTCAGG+GGG | 0.724067 | 4.3:-86456266 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATCAAATTTAAAAAATTTG+AGG | + | chr4.3:86457523-86457542 | MS.gene60025:intron | 10.0% |
!! | ACTTTAATATAAAAATTGTA+AGG | - | chr4.3:86456082-86456101 | None:intergenic | 10.0% |
!! | ATCAAATTTAAAAAATTTGA+GGG | + | chr4.3:86457524-86457543 | MS.gene60025:intron | 10.0% |
!!! | TTACAATTTTTATATTAAAG+TGG | + | chr4.3:86456081-86456100 | MS.gene60025:intron | 10.0% |
!! | AATAGAATAAACTTGAAATT+TGG | + | chr4.3:86455961-86455980 | MS.gene60025:intron | 15.0% |
!! | ATAATAAAAATTTGAGAAAG+AGG | + | chr4.3:86457008-86457027 | MS.gene60025:CDS | 15.0% |
!!! | CTTTCTCAAATTTTTATTAT+AGG | - | chr4.3:86457008-86457027 | None:intergenic | 15.0% |
!!! | TTTTTTAAATTTGATTCTGA+TGG | - | chr4.3:86457519-86457538 | None:intergenic | 15.0% |
!! | AAAATGTAGAAAGGAAAAAA+TGG | - | chr4.3:86457247-86457266 | None:intergenic | 20.0% |
!! | ACACCTAATATAGTATATAA+GGG | - | chr4.3:86457637-86457656 | None:intergenic | 20.0% |
!! | ACATTAAAAAAAACGTCATA+AGG | - | chr4.3:86457484-86457503 | None:intergenic | 20.0% |
!! | ATATATATTCCATAGAAGTT+CGG | + | chr4.3:86457890-86457909 | MS.gene60025:intron | 20.0% |
!! | ATTCCCTTATATACTATATT+AGG | + | chr4.3:86457631-86457650 | MS.gene60025:intron | 20.0% |
!! | TACAAAAACAAAATGTAGAA+AGG | - | chr4.3:86457256-86457275 | None:intergenic | 20.0% |
!! | TCTAACAATTATAAATTGCA+GGG | + | chr4.3:86458025-86458044 | MS.gene60025:intron | 20.0% |
!! | TTATATTAAAGTGGTGATTT+AGG | + | chr4.3:86456090-86456109 | MS.gene60025:intron | 20.0% |
!! | TTCTAACAATTATAAATTGC+AGG | + | chr4.3:86458024-86458043 | MS.gene60025:intron | 20.0% |
!! | TTTATGTAATTATACCACTA+TGG | + | chr4.3:86455810-86455829 | MS.gene60025:intron | 20.0% |
!! | TTTGGATTATTTAATCATGA+TGG | + | chr4.3:86457139-86457158 | MS.gene60025:CDS | 20.0% |
!!! | TTGGAATTTTTTTCACAAAT+TGG | + | chr4.3:86456707-86456726 | MS.gene60025:CDS | 20.0% |
! | AATAAGTGTGACTATTATGA+TGG | + | chr4.3:86456029-86456048 | MS.gene60025:intron | 25.0% |
! | AATTATAAATTGCAGGGAAT+TGG | + | chr4.3:86458031-86458050 | MS.gene60025:intron | 25.0% |
! | ACCTAAAATTTCATTTCCAA+TGG | - | chr4.3:86456498-86456517 | None:intergenic | 25.0% |
! | AGTTTATGTCAATATGTTGA+GGG | - | chr4.3:86456781-86456800 | None:intergenic | 25.0% |
! | ATAGTATATAAGGGAATTCT+GGG | - | chr4.3:86457628-86457647 | None:intergenic | 25.0% |
! | ATTATAAATTGCAGGGAATT+GGG | + | chr4.3:86458032-86458051 | MS.gene60025:intron | 25.0% |
! | CACACCTAATATAGTATATA+AGG | - | chr4.3:86457638-86457657 | None:intergenic | 25.0% |
! | CCAAAGAAAAATTTGAAAGT+AGG | - | chr4.3:86456173-86456192 | None:intergenic | 25.0% |
! | CTCTCTACGATAAATAATTA+AGG | - | chr4.3:86457353-86457372 | None:intergenic | 25.0% |
! | CTTTGATGTTTCATAGAAAA+AGG | + | chr4.3:86455765-86455784 | MS.gene60025:intron | 25.0% |
! | GGGTATGCATTTATATAAAA+AGG | - | chr4.3:86456737-86456756 | None:intergenic | 25.0% |
! | GTGTTATGTCAATAACAAAT+CGG | + | chr4.3:86457655-86457674 | MS.gene60025:intron | 25.0% |
! | TAGTTTATGTCAATATGTTG+AGG | - | chr4.3:86456782-86456801 | None:intergenic | 25.0% |
! | TATAGTATATAAGGGAATTC+TGG | - | chr4.3:86457629-86457648 | None:intergenic | 25.0% |
! | TGTGAAAAAAATTCCAACAA+AGG | - | chr4.3:86456704-86456723 | None:intergenic | 25.0% |
! | TTGTTAGAAATCTTTAAGCA+TGG | - | chr4.3:86458013-86458032 | None:intergenic | 25.0% |
!! | AAGGTACTTATTTGCAATTA+AGG | + | chr4.3:86455784-86455803 | MS.gene60025:intron | 25.0% |
!! | ATTGGAAATGAAATTTTAGG+TGG | + | chr4.3:86456497-86456516 | MS.gene60025:CDS | 25.0% |
!! | ATTTTGCATTGGAGAAATTT+GGG | + | chr4.3:86456891-86456910 | MS.gene60025:CDS | 25.0% |
!! | CATTTTTATAGGCCAAAAAA+GGG | - | chr4.3:86456757-86456776 | None:intergenic | 25.0% |
!! | CCTACTTTCAAATTTTTCTT+TGG | + | chr4.3:86456170-86456189 | MS.gene60025:intron | 25.0% |
!! | GTCATAATGTAGTTTACTTT+TGG | - | chr4.3:86456840-86456859 | None:intergenic | 25.0% |
!! | TATTTTGCATTGGAGAAATT+TGG | + | chr4.3:86456890-86456909 | MS.gene60025:CDS | 25.0% |
!!! | AGTAAAAAAGCATTTCTGAT+GGG | + | chr4.3:86457781-86457800 | MS.gene60025:intron | 25.0% |
!!! | TAGTAAAAAAGCATTTCTGA+TGG | + | chr4.3:86457780-86457799 | MS.gene60025:intron | 25.0% |
!!! | TATAAATGCATACCCTTTTT+TGG | + | chr4.3:86456742-86456761 | MS.gene60025:CDS | 25.0% |
!!! | TCATTTTTATAGGCCAAAAA+AGG | - | chr4.3:86456758-86456777 | None:intergenic | 25.0% |
AAAATAGTTGGAATTGCCAT+TGG | + | chr4.3:86456479-86456498 | MS.gene60025:CDS | 30.0% | |
AACATAAACAATAACTAGCC+TGG | - | chr4.3:86457852-86457871 | None:intergenic | 30.0% | |
AAGAGGTTACTTAAGAGAAA+AGG | + | chr4.3:86457025-86457044 | MS.gene60025:CDS | 30.0% | |
ACCATCTTCATGTACATTTA+GGG | + | chr4.3:86456655-86456674 | MS.gene60025:CDS | 30.0% | |
ATTGTCTTTAATCCAGTTCA+TGG | - | chr4.3:86456435-86456454 | None:intergenic | 30.0% | |
GATAAAACCAACCTAAATCA+TGG | - | chr4.3:86457976-86457995 | None:intergenic | 30.0% | |
GCATATGATATTGGATTTAC+TGG | + | chr4.3:86457169-86457188 | MS.gene60025:CDS | 30.0% | |
GTCAATACATATGTAGTTGT+TGG | + | chr4.3:86455885-86455904 | MS.gene60025:intron | 30.0% | |
GTGAGATGTTTCATAGAAAA+AGG | + | chr4.3:86455832-86455851 | MS.gene60025:intron | 30.0% | |
TAGTATATAAGGGAATTCTG+GGG | - | chr4.3:86457627-86457646 | None:intergenic | 30.0% | |
TGGTGGAAATATTGAAGTTT+GGG | + | chr4.3:86456517-86456536 | MS.gene60025:CDS | 30.0% | |
TTGTTTGCTTTCTATACCAT+CGG | - | chr4.3:86455919-86455938 | None:intergenic | 30.0% | |
! | AAAGCATTTACAGGAACATA+TGG | + | chr4.3:86456209-86456228 | MS.gene60025:CDS | 30.0% |
! | ATTTTTGTTCCTGGAAGATA+TGG | - | chr4.3:86456464-86456483 | None:intergenic | 30.0% |
! | GAAATTTGGGTTTGATAAGA+TGG | + | chr4.3:86456904-86456923 | MS.gene60025:CDS | 30.0% |
! | GCCATTGGAAATGAAATTTT+AGG | + | chr4.3:86456494-86456513 | MS.gene60025:CDS | 30.0% |
! | GGATCTTGAGTAAATTTGTT+GGG | - | chr4.3:86457920-86457939 | None:intergenic | 30.0% |
! | TAAACCCTAACCAACATTTT+AGG | - | chr4.3:86457064-86457083 | None:intergenic | 30.0% |
!! | AAATGGATTACATACCTTGA+AGG | - | chr4.3:86457230-86457249 | None:intergenic | 30.0% |
!! | ATCTTGAGTAAATTTGTTGG+GGG | - | chr4.3:86457918-86457937 | None:intergenic | 30.0% |
!! | GATCTTGAGTAAATTTGTTG+GGG | - | chr4.3:86457919-86457938 | None:intergenic | 30.0% |
!! | GCTTTATTTAAGAAAAACCC+TGG | + | chr4.3:86456803-86456822 | MS.gene60025:CDS | 30.0% |
!! | GGAAGTATTGCATATGATAT+TGG | + | chr4.3:86457160-86457179 | MS.gene60025:CDS | 30.0% |
!! | TTTTCTTTGGTGCAGTATTA+GGG | + | chr4.3:86456183-86456202 | MS.gene60025:intron | 30.0% |
!! | TTTTTCTTTGGTGCAGTATT+AGG | + | chr4.3:86456182-86456201 | MS.gene60025:intron | 30.0% |
!!! | ATGTTGAGGGTCATTTTTAT+AGG | - | chr4.3:86456768-86456787 | None:intergenic | 30.0% |
!!! | ATTCCAACTATTTTTGTTCC+TGG | - | chr4.3:86456473-86456492 | None:intergenic | 30.0% |
!!! | CTATAGATATTTTTTGCAGC+AGG | - | chr4.3:86456554-86456573 | None:intergenic | 30.0% |
AAGCATGGTAGTTATGCATA+AGG | - | chr4.3:86457998-86458017 | None:intergenic | 35.0% | |
AATGTTCAACCATATCTTCC+AGG | + | chr4.3:86456452-86456471 | MS.gene60025:CDS | 35.0% | |
AATTGGGTCTTCATACATGA+TGG | + | chr4.3:86458048-86458067 | MS.gene60025:CDS | 35.0% | |
ACCTTACATGAAACCTTTGT+TGG | + | chr4.3:86456688-86456707 | MS.gene60025:CDS | 35.0% | |
ACTATATTTATAGCCAGTGG+CGG | + | chr4.3:86457568-86457587 | MS.gene60025:intron | 35.0% | |
AGCATACTAGTCCATGATTT+AGG | + | chr4.3:86457962-86457981 | MS.gene60025:intron | 35.0% | |
AGTATATAAGGGAATTCTGG+GGG | - | chr4.3:86457626-86457645 | None:intergenic | 35.0% | |
ATCGTTAGATCAACATCAGA+CGG | - | chr4.3:86455988-86456007 | None:intergenic | 35.0% | |
ATGTCTGTCAAAAGTTCGTT+CGG | - | chr4.3:86456392-86456411 | None:intergenic | 35.0% | |
CACCATCTTCATGTACATTT+AGG | + | chr4.3:86456654-86456673 | MS.gene60025:CDS | 35.0% | |
CCAACTATATTTATAGCCAG+TGG | + | chr4.3:86457565-86457584 | MS.gene60025:intron | 35.0% | |
CGGATCTTGAGTAAATTTGT+TGG | - | chr4.3:86457921-86457940 | None:intergenic | 35.0% | |
CTAAATGTACATGAAGATGG+TGG | - | chr4.3:86456656-86456675 | None:intergenic | 35.0% | |
CTTCCAGGAACAAAAATAGT+TGG | + | chr4.3:86456467-86456486 | MS.gene60025:CDS | 35.0% | |
GATTACATACCTTGAAGGAA+AGG | - | chr4.3:86457225-86457244 | None:intergenic | 35.0% | |
GGAACATATGGAGTAAACTA+TGG | + | chr4.3:86456221-86456240 | MS.gene60025:CDS | 35.0% | |
TACTAGTCCATGATTTAGGT+TGG | + | chr4.3:86457966-86457985 | MS.gene60025:intron | 35.0% | |
TATGAAACATCTCACCATAG+TGG | - | chr4.3:86455827-86455846 | None:intergenic | 35.0% | |
TCCAACAAAGGTTTCATGTA+AGG | - | chr4.3:86456692-86456711 | None:intergenic | 35.0% | |
TCCCTAAATGTACATGAAGA+TGG | - | chr4.3:86456659-86456678 | None:intergenic | 35.0% | |
TTCATTATCATCACCATGAG+AGG | - | chr4.3:86456957-86456976 | None:intergenic | 35.0% | |
TTGGTACTTTCAAGGGATTT+AGG | + | chr4.3:86457823-86457842 | MS.gene60025:intron | 35.0% | |
! | AAACCTCAATTTGCTTTGCT+AGG | - | chr4.3:86456595-86456614 | None:intergenic | 35.0% |
! | AAAGTACCTACCTAGAGAAA+AGG | - | chr4.3:86455724-86455743 | None:intergenic | 35.0% |
! | AACGAACTTTTGACAGACAT+AGG | + | chr4.3:86456392-86456411 | MS.gene60025:CDS | 35.0% |
! | ATAAACAATAACTAGCCTGG+TGG | - | chr4.3:86457849-86457868 | None:intergenic | 35.0% |
! | ATAGGCCTAAAATGTTGGTT+AGG | + | chr4.3:86457056-86457075 | MS.gene60025:CDS | 35.0% |
! | CCACTGGCTATAAATATAGT+TGG | - | chr4.3:86457568-86457587 | None:intergenic | 35.0% |
! | GTGGTGGAAATATTGAAGTT+TGG | + | chr4.3:86456516-86456535 | MS.gene60025:CDS | 35.0% |
! | TAGGCCTAAAATGTTGGTTA+GGG | + | chr4.3:86457057-86457076 | MS.gene60025:CDS | 35.0% |
! | TTAGGGAACAAAGCATTTAC+AGG | + | chr4.3:86456200-86456219 | MS.gene60025:CDS | 35.0% |
! | TTATCAGCAACCTTTTCTCT+AGG | + | chr4.3:86455711-86455730 | MS.gene60025:CDS | 35.0% |
! | TTCAATGAGAATTTGAAGCC+TGG | + | chr4.3:86457097-86457116 | MS.gene60025:CDS | 35.0% |
! | TTTTGGCATCATAAATGCCA+GGG | - | chr4.3:86456823-86456842 | None:intergenic | 35.0% |
!! | AAATCCCTTGAAAGTACCAA+AGG | - | chr4.3:86457823-86457842 | None:intergenic | 35.0% |
!! | AATCCCTTGAAAGTACCAAA+GGG | - | chr4.3:86457822-86457841 | None:intergenic | 35.0% |
!! | ATGCATTGCTTTTCATGACA+TGG | + | chr4.3:86456138-86456157 | MS.gene60025:intron | 35.0% |
!! | GGAAATGAAATTTTAGGTGG+TGG | + | chr4.3:86456500-86456519 | MS.gene60025:CDS | 35.0% |
!!! | TGATGCTGCTTATTTTGCAT+TGG | + | chr4.3:86456880-86456899 | MS.gene60025:CDS | 35.0% |
AAGTGTAACCACACTTTCAG+GGG | - | chr4.3:86456270-86456289 | None:intergenic | 40.0% | |
ACCTCATAGGCCTAAAATGT+TGG | + | chr4.3:86457051-86457070 | MS.gene60025:CDS | 40.0% | |
AGAGAAAAGGAACACCTCAT+AGG | + | chr4.3:86457038-86457057 | MS.gene60025:CDS | 40.0% | |
ATAAATTGGTAAAGGGTCGC+GGG | + | chr4.3:86457701-86457720 | MS.gene60025:intron | 40.0% | |
CATAAATTGGTAAAGGGTCG+CGG | + | chr4.3:86457700-86457719 | MS.gene60025:intron | 40.0% | |
CATCCCTTTGGTACTTTCAA+GGG | + | chr4.3:86457816-86457835 | MS.gene60025:intron | 40.0% | |
CCAAAGAAAGAATGAACACG+AGG | - | chr4.3:86455682-86455701 | None:intergenic | 40.0% | |
CCTCGTGTTCATTCTTTCTT+TGG | + | chr4.3:86455679-86455698 | MS.gene60025:CDS | 40.0% | |
CTAGTGTGAGCTATAAACAG+TGG | - | chr4.3:86457944-86457963 | None:intergenic | 40.0% | |
GAAGTGTAACCACACTTTCA+GGG | - | chr4.3:86456271-86456290 | None:intergenic | 40.0% | |
GCAAATACAGCTTCTGAATG+TGG | - | chr4.3:86456623-86456642 | None:intergenic | 40.0% | |
TAACAAATCGGTTGTTGCAG+TGG | + | chr4.3:86457667-86457686 | MS.gene60025:intron | 40.0% | |
TACCTTGAAGGAAAGGAAAG+AGG | - | chr4.3:86457218-86457237 | None:intergenic | 40.0% | |
TATAGTGCCCTTGATAGACT+TGG | + | chr4.3:86456569-86456588 | MS.gene60025:CDS | 40.0% | |
TATTCATGCAGTCAGCACAT+TGG | - | chr4.3:86456013-86456032 | None:intergenic | 40.0% | |
TCATCCCTTTGGTACTTTCA+AGG | + | chr4.3:86457815-86457834 | MS.gene60025:intron | 40.0% | |
TCCTATTCCAGATCCTTTGA+AGG | - | chr4.3:86456354-86456373 | None:intergenic | 40.0% | |
! | ACCAACATTTTAGGCCTATG+AGG | - | chr4.3:86457055-86457074 | None:intergenic | 40.0% |
! | AGAAGTGTAACCACACTTTC+AGG | - | chr4.3:86456272-86456291 | None:intergenic | 40.0% |
! | CATGGTGATGATAATGAAGC+TGG | + | chr4.3:86456959-86456978 | MS.gene60025:CDS | 40.0% |
! | CTTTTGACAGACATAGGTGT+AGG | + | chr4.3:86456398-86456417 | MS.gene60025:CDS | 40.0% |
! | CTTTTGGCATCATAAATGCC+AGG | - | chr4.3:86456824-86456843 | None:intergenic | 40.0% |
! | GGGTGCCATAAATTGGTAAA+GGG | + | chr4.3:86457694-86457713 | MS.gene60025:intron | 40.0% |
!! | GAAAGTACCAAAGGGATGAT+GGG | - | chr4.3:86457814-86457833 | None:intergenic | 40.0% |
!! | GAAGTGATTGTTTCTGAGAC+TGG | + | chr4.3:86456926-86456945 | MS.gene60025:CDS | 40.0% |
!! | GATTGTTTCTGAGACTGGTT+GGG | + | chr4.3:86456931-86456950 | MS.gene60025:CDS | 40.0% |
!! | TGAAAGTACCAAAGGGATGA+TGG | - | chr4.3:86457815-86457834 | None:intergenic | 40.0% |
!! | TGATTGTTTCTGAGACTGGT+TGG | + | chr4.3:86456930-86456949 | MS.gene60025:CDS | 40.0% |
AATCGGTTGTTGCAGTGGTA+AGG | + | chr4.3:86457672-86457691 | MS.gene60025:intron | 45.0% | |
AGTGTAACCACACTTTCAGG+GGG | - | chr4.3:86456269-86456288 | None:intergenic | 45.0% | |
ATCGGTTGTTGCAGTGGTAA+GGG | + | chr4.3:86457673-86457692 | MS.gene60025:intron | 45.0% | |
ATTCGAACCCATCATCCCTT+TGG | + | chr4.3:86457804-86457823 | MS.gene60025:intron | 45.0% | |
CAAGTCCTAAGTGCCTTCAA+AGG | + | chr4.3:86456338-86456357 | MS.gene60025:CDS | 45.0% | |
CACAATTCCACACATTCACG+TGG | + | chr4.3:86455863-86455882 | MS.gene60025:intron | 45.0% | |
CCAGGATCAGAAAGACACTT+TGG | + | chr4.3:86457121-86457140 | MS.gene60025:CDS | 45.0% | |
CGCGACCCTTTACCAATTTA+TGG | - | chr4.3:86457702-86457721 | None:intergenic | 45.0% | |
CTAAGTGCCTTCAAAGGATC+TGG | + | chr4.3:86456344-86456363 | MS.gene60025:CDS | 45.0% | |
CTCCTCTTTCCTTTCCTTCA+AGG | + | chr4.3:86457213-86457232 | MS.gene60025:CDS | 45.0% | |
CTTGAAGGAAAGGAAAGAGG+AGG | - | chr4.3:86457215-86457234 | None:intergenic | 45.0% | |
GTGTGAGCTATAAACAGTGG+CGG | - | chr4.3:86457941-86457960 | None:intergenic | 45.0% | |
GTTGTTGGATCGAAATCCGA+TGG | + | chr4.3:86455900-86455919 | MS.gene60025:intron | 45.0% | |
TGCTAGGCCAAGTCTATCAA+GGG | - | chr4.3:86456579-86456598 | None:intergenic | 45.0% | |
TGGCCTAGCAAAGCAAATTG+AGG | + | chr4.3:86456589-86456608 | MS.gene60025:CDS | 45.0% | |
TTGCTAGGCCAAGTCTATCA+AGG | - | chr4.3:86456580-86456599 | None:intergenic | 45.0% | |
! | CAGCAACCTTTTCTCTAGGT+AGG | + | chr4.3:86455715-86455734 | MS.gene60025:intron | 45.0% |
! | CCAAAGTGTCTTTCTGATCC+TGG | - | chr4.3:86457124-86457143 | None:intergenic | 45.0% |
! | GCCTTCAAAGGATCTGGAAT+AGG | + | chr4.3:86456350-86456369 | MS.gene60025:CDS | 45.0% |
! | GGGGTGCCATAAATTGGTAA+AGG | + | chr4.3:86457693-86457712 | MS.gene60025:intron | 45.0% |
! | GTATTGACCACGTGAATGTG+TGG | - | chr4.3:86455873-86455892 | None:intergenic | 45.0% |
!! | CAGATCCTTTGAAGGCACTT+AGG | - | chr4.3:86456346-86456365 | None:intergenic | 45.0% |
!! | TGGTAAGGGGTGCCATAAAT+TGG | + | chr4.3:86457687-86457706 | MS.gene60025:intron | 45.0% |
!! | TTGAAGGCACTTAGGACTTG+AGG | - | chr4.3:86456338-86456357 | None:intergenic | 45.0% |
AAAGAGGAGGTTGCTGAGGA+AGG | - | chr4.3:86457202-86457221 | None:intergenic | 50.0% | |
AAGGAAAGAGGAGGTTGCTG+AGG | - | chr4.3:86457206-86457225 | None:intergenic | 50.0% | |
TCGGTTGTTGCAGTGGTAAG+GGG | + | chr4.3:86457674-86457693 | MS.gene60025:intron | 50.0% | |
TGTCTTTCTGATCCTGGTCC+AGG | - | chr4.3:86457118-86457137 | None:intergenic | 50.0% | |
TTCAAGGGATTTAGGCCACC+AGG | + | chr4.3:86457831-86457850 | MS.gene60025:intron | 50.0% | |
! | GAGAATTTGAAGCCTGGACC+AGG | + | chr4.3:86457103-86457122 | MS.gene60025:CDS | 50.0% |
GCGAAGATCGAGCCATGAAC+TGG | + | chr4.3:86456420-86456439 | MS.gene60025:CDS | 55.0% | |
GTAACCACACTTTCAGGGGG+AGG | - | chr4.3:86456266-86456285 | None:intergenic | 55.0% | |
GTCGCGGGTTCAACACTTCT+TGG | + | chr4.3:86457716-86457735 | MS.gene60025:intron | 55.0% | |
TCTACCTCCCCCTGAAAGTG+TGG | + | chr4.3:86456259-86456278 | MS.gene60025:CDS | 55.0% | |
!! | AGCCAGTGGCGGATCTTCTT+AGG | + | chr4.3:86457579-86457598 | MS.gene60025:intron | 55.0% |
!! | CCAGTGGCGGATCTTCTTAG+GGG | + | chr4.3:86457581-86457600 | MS.gene60025:intron | 55.0% |
!! | GCCAGTGGCGGATCTTCTTA+GGG | + | chr4.3:86457580-86457599 | MS.gene60025:intron | 55.0% |
!! | TTGGGGGTGCCGAACTTCTA+TGG | - | chr4.3:86457902-86457921 | None:intergenic | 55.0% |
CCCCTAAGAAGATCCGCCAC+TGG | - | chr4.3:86457584-86457603 | None:intergenic | 60.0% | |
! | GAGACTGGTTGGGCCTCTCA+TGG | + | chr4.3:86456941-86456960 | MS.gene60025:CDS | 60.0% |
! | GGATCTTCTTAGGGGCTGGC+AGG | + | chr4.3:86457589-86457608 | MS.gene60025:intron | 60.0% |
! | GGGAATTCTGGGGGATGCCA+TGG | - | chr4.3:86457617-86457636 | None:intergenic | 60.0% |
! | TGGCGGATCTTCTTAGGGGC+TGG | + | chr4.3:86457585-86457604 | MS.gene60025:intron | 60.0% |
! | TTAGGGGCTGGCAGGTGCCA+TGG | + | chr4.3:86457597-86457616 | MS.gene60025:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 86455666 | 86458117 | 86455666 | ID=MS.gene60025 |
chr4.3 | mRNA | 86455666 | 86458117 | 86455666 | ID=MS.gene60025.t1;Parent=MS.gene60025 |
chr4.3 | exon | 86455666 | 86455732 | 86455666 | ID=MS.gene60025.t1.exon1;Parent=MS.gene60025.t1 |
chr4.3 | CDS | 86455666 | 86455732 | 86455666 | ID=cds.MS.gene60025.t1;Parent=MS.gene60025.t1 |
chr4.3 | exon | 86456198 | 86457234 | 86456198 | ID=MS.gene60025.t1.exon2;Parent=MS.gene60025.t1 |
chr4.3 | CDS | 86456198 | 86457234 | 86456198 | ID=cds.MS.gene60025.t1;Parent=MS.gene60025.t1 |
chr4.3 | exon | 86458046 | 86458117 | 86458046 | ID=MS.gene60025.t1.exon3;Parent=MS.gene60025.t1 |
chr4.3 | CDS | 86458046 | 86458117 | 86458046 | ID=cds.MS.gene60025.t1;Parent=MS.gene60025.t1 |
Gene Sequence |
Protein sequence |