Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60149.t1 | XP_003609376.2 | 97.3 | 480 | 12 | 1 | 1 | 480 | 1 | 479 | 4.90E-259 | 903.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60149.t1 | E5KGE0 | 62.8 | 492 | 167 | 5 | 1 | 480 | 1 | 488 | 9.0e-161 | 568.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60149.t1 | G7JE65 | 97.3 | 480 | 12 | 1 | 1 | 480 | 1 | 479 | 3.5e-259 | 903.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene85936 | MS.gene60149 | PPI |
| MS.gene83572 | MS.gene60149 | PPI |
| MS.gene86975 | MS.gene60149 | PPI |
| MS.gene60149 | MS.gene067452 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60149.t1 | MTR_4g114970 | 97.500 | 480 | 11 | 1 | 1 | 480 | 1 | 479 | 0.0 | 979 |
| MS.gene60149.t1 | MTR_4g114970 | 97.455 | 393 | 9 | 1 | 1 | 393 | 1 | 392 | 0.0 | 800 |
| MS.gene60149.t1 | MTR_2g104600 | 46.747 | 415 | 181 | 5 | 27 | 441 | 27 | 401 | 1.65e-131 | 387 |
| MS.gene60149.t1 | MTR_2g104600 | 43.614 | 415 | 178 | 6 | 27 | 441 | 27 | 385 | 2.42e-119 | 356 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60149.t1 | AT2G42160 | 61.179 | 492 | 175 | 6 | 1 | 480 | 1 | 488 | 0.0 | 629 |
| MS.gene60149.t1 | AT2G42160 | 62.045 | 440 | 153 | 4 | 1 | 429 | 1 | 437 | 0.0 | 577 |
| MS.gene60149.t1 | AT2G42160 | 62.129 | 404 | 139 | 4 | 1 | 393 | 1 | 401 | 0.0 | 531 |
| MS.gene60149.t1 | AT2G26000 | 41.416 | 466 | 252 | 9 | 27 | 480 | 22 | 478 | 7.56e-129 | 382 |
| MS.gene60149.t1 | AT2G26000 | 41.416 | 466 | 252 | 9 | 27 | 480 | 22 | 478 | 7.56e-129 | 382 |
| MS.gene60149.t1 | AT2G26000 | 39.056 | 466 | 245 | 10 | 27 | 480 | 22 | 460 | 1.47e-115 | 348 |
Find 103 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTGCGTTCTGTGAATTT+AGG | 0.150005 | 8.3:+12407018 | None:intergenic |
| GGTGAGAGAGAATTGGAATT+AGG | 0.180412 | 8.3:+12406955 | None:intergenic |
| CTCTGCGTTCTGTGAATTTA+GGG | 0.219295 | 8.3:+12407019 | None:intergenic |
| AAACTTCTTGCCATTGAAAT+AGG | 0.232877 | 8.3:+12406662 | None:intergenic |
| AGTGAAGATTTAGAAGTTAA+TGG | 0.246664 | 8.3:-12404010 | MS.gene60149:CDS |
| GTGCGTATTCCACTTGTATC+AGG | 0.257066 | 8.3:+12405735 | None:intergenic |
| GTGAGAGAGAATTGGAATTA+GGG | 0.271739 | 8.3:+12406956 | None:intergenic |
| GTGGAGAAGGCTGCAACTTC+TGG | 0.280137 | 8.3:-12402989 | MS.gene60149:CDS |
| GAATGAGAGGGTCCTTGATT+TGG | 0.301939 | 8.3:-12402603 | MS.gene60149:CDS |
| CATTCTGCCCTTAGGTTAAT+CGG | 0.302536 | 8.3:-12402848 | MS.gene60149:intron |
| GTGAAGATTTAGAAGTTAAT+GGG | 0.313739 | 8.3:-12404009 | MS.gene60149:CDS |
| TCATCGAAGGAGAAATAATT+AGG | 0.314747 | 8.3:+12406910 | None:intergenic |
| CATCCTGTTGTTGACATAAT+CGG | 0.338420 | 8.3:+12404485 | None:intergenic |
| GAGAAGAGGTGAGAGAGAAT+TGG | 0.361552 | 8.3:+12406948 | None:intergenic |
| GTCAGACTCAAATGGAATAA+AGG | 0.364370 | 8.3:-12402437 | MS.gene60149:CDS |
| TTATGTCCATCGACTGAATC+AGG | 0.387311 | 8.3:-12404116 | MS.gene60149:CDS |
| ACAACAAATTTGGGATTATG+TGG | 0.392975 | 8.3:-12404146 | MS.gene60149:CDS |
| TTCATCATCTTCTCTTCATC+AGG | 0.396642 | 8.3:-12406849 | MS.gene60149:intron |
| ACCAACATGTCCAGTTTGCT+TGG | 0.402731 | 8.3:-12405920 | MS.gene60149:CDS |
| CCGTCTTCTTACATCTCAAT+TGG | 0.403056 | 8.3:-12403396 | MS.gene60149:CDS |
| GTCTGGGTTTGTATGATTTG+TGG | 0.411595 | 8.3:-12404424 | MS.gene60149:CDS |
| GTGGAACATTAGATGATGTC+TGG | 0.413609 | 8.3:-12404441 | MS.gene60149:CDS |
| ACTTCTTGCCTCAATTAGTA+AGG | 0.414456 | 8.3:+12403039 | None:intergenic |
| TGAAACTCACCCAAGCAAAC+TGG | 0.414850 | 8.3:+12405910 | None:intergenic |
| GGTCCTTGATTTGGAGGAAC+AGG | 0.415267 | 8.3:-12402594 | MS.gene60149:intron |
| TTCAACTTTGCTGTTAAAGA+AGG | 0.416559 | 8.3:+12403985 | None:intergenic |
| GCATTTCATACCTATTTCAA+TGG | 0.416711 | 8.3:-12406672 | MS.gene60149:CDS |
| TGTTTGAATCCCAGAGAGAC+TGG | 0.421884 | 8.3:-12405760 | MS.gene60149:intron |
| TTCTTGCTGTTTCCAGGAGA+AGG | 0.425015 | 8.3:+12402382 | None:intergenic |
| GCTCATGAGCAACCTTCTCC+TGG | 0.443145 | 8.3:-12402394 | MS.gene60149:CDS |
| GTTCACTGTATGTCTCTAGA+AGG | 0.443877 | 8.3:-12404055 | MS.gene60149:CDS |
| GGAGCGGAGAAGATGAGTTC+GGG | 0.448861 | 8.3:+12407060 | None:intergenic |
| GAGAGGAGTGTGAAGCGCTT+CGG | 0.450487 | 8.3:+12406980 | None:intergenic |
| GGCTGCAACTTCTGGCATGC+TGG | 0.450669 | 8.3:-12402981 | MS.gene60149:CDS |
| TGGAGCGGAGAAGATGAGTT+CGG | 0.454323 | 8.3:+12407059 | None:intergenic |
| GATGAAGACGATCAAGATAG+TGG | 0.455616 | 8.3:+12406866 | None:intergenic |
| AGAATTGGAATTAGGGAGAG+AGG | 0.456750 | 8.3:+12406963 | None:intergenic |
| GATAAAATGTCAGACTCAAA+TGG | 0.459339 | 8.3:-12402445 | MS.gene60149:CDS |
| GGAACGATGGGATGGAAGAT+AGG | 0.463072 | 8.3:-12406737 | MS.gene60149:CDS |
| CGTCGTCGACTGAGTGGACT+CGG | 0.465807 | 8.3:+12407097 | None:intergenic |
| TCTCCTTCGATGATTTCATT+CGG | 0.467942 | 8.3:-12406900 | MS.gene60149:CDS |
| CTGCCGATTATGTCAACAAC+AGG | 0.469592 | 8.3:-12404488 | MS.gene60149:CDS |
| TTATGAATCCTTACTAATTG+AGG | 0.471285 | 8.3:-12403047 | MS.gene60149:CDS |
| TCGGAATGTGAAGAAGTTGC+TGG | 0.471476 | 8.3:-12405970 | MS.gene60149:CDS |
| TTTGATTTGGTAGGAACGAT+GGG | 0.480219 | 8.3:-12406749 | MS.gene60149:intron |
| TGTATGATTTGTGGATTTGT+CGG | 0.483896 | 8.3:-12404415 | MS.gene60149:CDS |
| GTGGACATATTTGTCTTGCC+AGG | 0.485200 | 8.3:-12405670 | MS.gene60149:intron |
| TGAGAGGGTCCTTGATTTGG+AGG | 0.485934 | 8.3:-12402600 | MS.gene60149:CDS |
| CCGTTATTACTTACCTCAGC+AGG | 0.492902 | 8.3:+12406636 | None:intergenic |
| ATTTGTGGATTTGTCGGATG+TGG | 0.494341 | 8.3:-12404409 | MS.gene60149:CDS |
| CCAACATGTCCAGTTTGCTT+GGG | 0.495855 | 8.3:-12405919 | MS.gene60149:intron |
| GTTGCTGGGACTCCTCCAGC+TGG | 0.513889 | 8.3:-12405955 | MS.gene60149:CDS |
| CTTCTCCACTGCTTCAGATA+CGG | 0.513939 | 8.3:+12403003 | None:intergenic |
| CAGGATCAATCTAGAATTGA+CGG | 0.519347 | 8.3:-12404097 | MS.gene60149:CDS |
| TTCACTGTATGTCTCTAGAA+GGG | 0.522047 | 8.3:-12404054 | MS.gene60149:CDS |
| TTTGCTTTCCGTGGAATACT+CGG | 0.522856 | 8.3:-12405989 | MS.gene60149:CDS |
| TGCGTATTCCACTTGTATCA+GGG | 0.527421 | 8.3:+12405736 | None:intergenic |
| GTTCCACAAATAAAACAAGT+TGG | 0.529607 | 8.3:+12404457 | None:intergenic |
| CGCAAGGGCATTGAAATGAA+TGG | 0.532039 | 8.3:+12405700 | None:intergenic |
| GGTATTTCTGTACAACCAGC+TGG | 0.536457 | 8.3:+12405940 | None:intergenic |
| AAGGACATGCTATTCAGCAT+TGG | 0.544403 | 8.3:-12404207 | MS.gene60149:CDS |
| ATTGATCCTGATTCAGTCGA+TGG | 0.544517 | 8.3:+12404110 | None:intergenic |
| ATACCTGTTCCTCCAAATCA+AGG | 0.546149 | 8.3:+12402591 | None:intergenic |
| ATGAAGACGATCAAGATAGT+GGG | 0.546605 | 8.3:+12406867 | None:intergenic |
| CTTTAACAGCAAAGTTGAAG+CGG | 0.546937 | 8.3:-12403981 | MS.gene60149:intron |
| ATTTGGTAGGAACGATGGGA+TGG | 0.551457 | 8.3:-12406745 | MS.gene60149:intron |
| TGGAACATTAGATGATGTCT+GGG | 0.559204 | 8.3:-12404440 | MS.gene60149:CDS |
| TTCACATTCCGAGTATTCCA+CGG | 0.559393 | 8.3:+12405981 | None:intergenic |
| CGTATCTGAAGCAGTGGAGA+AGG | 0.559498 | 8.3:-12403002 | MS.gene60149:CDS |
| AGATTAAAGAAGCAGAAGAG+AGG | 0.561135 | 8.3:-12402791 | MS.gene60149:intron |
| CAACAAATTTGGGATTATGT+GGG | 0.563048 | 8.3:-12404145 | MS.gene60149:CDS |
| GAAGGTTGCTCATGAGCCAC+TGG | 0.563743 | 8.3:+12402400 | None:intergenic |
| CGGAATGTGAAGAAGTTGCT+GGG | 0.571574 | 8.3:-12405969 | MS.gene60149:CDS |
| TTCTTGGGATTGGGTTGGAG+CGG | 0.574169 | 8.3:+12407044 | None:intergenic |
| AATGCCCTTGCGTCTCAAAG+TGG | 0.575637 | 8.3:-12405689 | MS.gene60149:CDS |
| GATTCTCGTCGTCGACTGAG+TGG | 0.577788 | 8.3:+12407091 | None:intergenic |
| CATTGAAGTCGATGAATGAG+AGG | 0.577929 | 8.3:-12402616 | MS.gene60149:CDS |
| TAGAATTGACGGCAAGTCGA+AGG | 0.578499 | 8.3:-12404086 | MS.gene60149:CDS |
| TATGTCCACTTTGAGACGCA+AGG | 0.588521 | 8.3:+12405684 | None:intergenic |
| AGAAAGAAATGTTGTTGCTG+AGG | 0.588529 | 8.3:-12402927 | MS.gene60149:intron |
| AAGATGAGTTCGGGATCGAG+TGG | 0.588594 | 8.3:+12407069 | None:intergenic |
| AGACTCAAATGGAATAAAGG+AGG | 0.592588 | 8.3:-12402434 | MS.gene60149:CDS |
| GTGGATTTGTCGGATGTGGA+AGG | 0.595592 | 8.3:-12404405 | MS.gene60149:intron |
| CCCAAGCAAACTGGACATGT+TGG | 0.601547 | 8.3:+12405919 | None:intergenic |
| AAGCTCCGTATCTGAAGCAG+TGG | 0.608444 | 8.3:-12403008 | MS.gene60149:CDS |
| ATGTCCACTTTGAGACGCAA+GGG | 0.620907 | 8.3:+12405685 | None:intergenic |
| GACTCAAATGGAATAAAGGA+GGG | 0.622185 | 8.3:-12402433 | MS.gene60149:CDS |
| GTGGACTCGGAGGAAGAACA+TGG | 0.623052 | 8.3:+12407110 | None:intergenic |
| ACAGCGAGGATGAAGAGAAG+AGG | 0.623767 | 8.3:+12406934 | None:intergenic |
| TGAAGATTTAGAAGTTAATG+GGG | 0.626069 | 8.3:-12404008 | MS.gene60149:CDS |
| TCACTGTATGTCTCTAGAAG+GGG | 0.634476 | 8.3:-12404053 | MS.gene60149:CDS |
| CCAATTGAGATGTAAGAAGA+CGG | 0.636618 | 8.3:+12403396 | None:intergenic |
| AAACCGAATGAAATCATCGA+AGG | 0.643428 | 8.3:+12406897 | None:intergenic |
| AAAACAGAAAGTCTGGTCGA+AGG | 0.644959 | 8.3:-12402360 | MS.gene60149:CDS |
| ACAGAAAGTCTGGTCGAAGG+CGG | 0.651997 | 8.3:-12402357 | MS.gene60149:CDS |
| ATTGAAGTCGATGAATGAGA+GGG | 0.674240 | 8.3:-12402615 | MS.gene60149:CDS |
| CCTAAATTCACAGAACGCAG+AGG | 0.674835 | 8.3:-12407018 | MS.gene60149:CDS |
| AGACTGGACCCTGATACAAG+TGG | 0.679214 | 8.3:-12405744 | MS.gene60149:CDS |
| TGAAGACGATCAAGATAGTG+GGG | 0.690985 | 8.3:+12406868 | None:intergenic |
| ATTTCTGTACAACCAGCTGG+AGG | 0.702761 | 8.3:+12405943 | None:intergenic |
| AGAAATAATTAGGAACAGCG+AGG | 0.702814 | 8.3:+12406920 | None:intergenic |
| GGAGGGAACAGTCTTACCAG+TGG | 0.721862 | 8.3:-12402416 | MS.gene60149:CDS |
| CGTCGACTGAGTGGACTCGG+AGG | 0.727644 | 8.3:+12407100 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAAAATCAACAATTA+GGG | + | chr8.3:12402693-12402712 | None:intergenic | 10.0% |
| !! | ATAATTATGAAATATTATCT+TGG | - | chr8.3:12404126-12404145 | MS.gene60149:CDS | 10.0% |
| !! | TAATTATGAAATATTATCTT+GGG | - | chr8.3:12404127-12404146 | MS.gene60149:CDS | 10.0% |
| !! | TATATAAATGACAATAAAAT+GGG | + | chr8.3:12405164-12405183 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTCTAAAAAACA+AGG | - | chr8.3:12404708-12404727 | MS.gene60149:intron | 10.0% |
| !! | ATAAATTTAAAAAACGACAA+AGG | + | chr8.3:12403369-12403388 | None:intergenic | 15.0% |
| !! | CAAAATTAAAATCAACAATT+AGG | + | chr8.3:12402694-12402713 | None:intergenic | 15.0% |
| !! | CAAGTAAATAGTATTAATAA+GGG | - | chr8.3:12403219-12403238 | MS.gene60149:intron | 15.0% |
| !! | CATATAGTTATTCTATAAAT+GGG | - | chr8.3:12405861-12405880 | MS.gene60149:intron | 15.0% |
| !! | CATTTATAGAATAACTATAT+GGG | + | chr8.3:12405862-12405881 | None:intergenic | 15.0% |
| !! | CCAACTTAAATTAATAATTA+GGG | + | chr8.3:12404662-12404681 | None:intergenic | 15.0% |
| !! | CTATATAAATGACAATAAAA+TGG | + | chr8.3:12405165-12405184 | None:intergenic | 15.0% |
| !! | TATTATTACACTTTAATCTT+TGG | - | chr8.3:12403850-12403869 | MS.gene60149:intron | 15.0% |
| !! | TCAAGTAAATAGTATTAATA+AGG | - | chr8.3:12403218-12403237 | MS.gene60149:intron | 15.0% |
| !! | TCATAATACTAAAACAAAAA+TGG | + | chr8.3:12406398-12406417 | None:intergenic | 15.0% |
| !! | TTTAAATATGTGATCATTTA+GGG | - | chr8.3:12406811-12406830 | MS.gene60149:intron | 15.0% |
| !! | TTTGTTTAACATATTAAGTA+GGG | + | chr8.3:12405136-12405155 | None:intergenic | 15.0% |
| !!! | AAGTATGTCTAAATAAATTT+TGG | + | chr8.3:12404421-12404440 | None:intergenic | 15.0% |
| !!! | ACTTTTTTTTTCTTTTTCAA+GGG | + | chr8.3:12402963-12402982 | None:intergenic | 15.0% |
| !!! | AGTAAAGTTGTTTTTTTTTT+TGG | - | chr8.3:12406759-12406778 | MS.gene60149:intron | 15.0% |
| !!! | ATTATAATGTTAACTTGTTA+AGG | + | chr8.3:12405584-12405603 | None:intergenic | 15.0% |
| !!! | CATTTTATTGTCATTTATAT+AGG | - | chr8.3:12405163-12405182 | MS.gene60149:intron | 15.0% |
| !!! | CCTAATTATTAATTTAAGTT+GGG | - | chr8.3:12404660-12404679 | MS.gene60149:intron | 15.0% |
| !!! | TCAAATAAGTTATTTCAAAT+AGG | - | chr8.3:12403091-12403110 | MS.gene60149:intron | 15.0% |
| !!! | TGTTGATTTTAATTTTGATT+TGG | - | chr8.3:12402697-12402716 | MS.gene60149:intron | 15.0% |
| !!! | TTGTCGTTTTTTAAATTTAT+TGG | - | chr8.3:12403369-12403388 | MS.gene60149:intron | 15.0% |
| !!! | TTTTAATCTAGATATAAAGA+AGG | - | chr8.3:12405233-12405252 | MS.gene60149:intron | 15.0% |
| !!! | TTTTGTTTAACATATTAAGT+AGG | + | chr8.3:12405137-12405156 | None:intergenic | 15.0% |
| !! | AATAGGACTTAAGTAAAAAT+AGG | - | chr8.3:12403108-12403127 | MS.gene60149:intron | 20.0% |
| !! | ACTTATGATGTTTATATTGT+AGG | - | chr8.3:12404947-12404966 | MS.gene60149:intron | 20.0% |
| !! | CCATATAGTTATTCTATAAA+TGG | - | chr8.3:12405860-12405879 | MS.gene60149:intron | 20.0% |
| !! | CCATTTATAGAATAACTATA+TGG | + | chr8.3:12405863-12405882 | None:intergenic | 20.0% |
| !! | CCCAACTTAAATTAATAATT+AGG | + | chr8.3:12404663-12404682 | None:intergenic | 20.0% |
| !! | CCCTAATTATTAATTTAAGT+TGG | - | chr8.3:12404659-12404678 | MS.gene60149:intron | 20.0% |
| !! | GTTTAAATATGTGATCATTT+AGG | - | chr8.3:12406810-12406829 | MS.gene60149:intron | 20.0% |
| !! | TCATTAAAAATTCAGAAATG+TGG | - | chr8.3:12406638-12406657 | MS.gene60149:intron | 20.0% |
| !! | TGAAATGAAGCTTATATTTA+GGG | - | chr8.3:12403270-12403289 | MS.gene60149:intron | 20.0% |
| !! | TGGAAATATTATTGTATTGA+TGG | - | chr8.3:12404906-12404925 | MS.gene60149:intron | 20.0% |
| !! | TTAAACATGTAATGAGAATA+TGG | + | chr8.3:12406796-12406815 | None:intergenic | 20.0% |
| !! | TTCAAAAAAGACTTGTATTT+AGG | - | chr8.3:12403304-12403323 | MS.gene60149:intron | 20.0% |
| !! | TTGAAATGAAGCTTATATTT+AGG | - | chr8.3:12403269-12403288 | MS.gene60149:intron | 20.0% |
| !! | TTTATCTTTATACAAGAGTT+TGG | + | chr8.3:12404281-12404300 | None:intergenic | 20.0% |
| !!! | AAGGTATTAATTGATTATTG+AGG | + | chr8.3:12403350-12403369 | None:intergenic | 20.0% |
| !!! | ACTAAATGGATTTTAATATC+TGG | + | chr8.3:12404630-12404649 | None:intergenic | 20.0% |
| !!! | ATTACAGAACTTTTTCAAAA+TGG | + | chr8.3:12402653-12402672 | None:intergenic | 20.0% |
| !!! | ATTTTAGAACACAACAAATT+TGG | - | chr8.3:12405303-12405322 | MS.gene60149:intron | 20.0% |
| !!! | ATTTTATGCTGATACTAATT+TGG | - | chr8.3:12405713-12405732 | MS.gene60149:CDS | 20.0% |
| !!! | ATTTTCTAAAAAACAAGGAA+GGG | - | chr8.3:12404713-12404732 | MS.gene60149:intron | 20.0% |
| !!! | GACTTTTTTTTTCTTTTTCA+AGG | + | chr8.3:12402964-12402983 | None:intergenic | 20.0% |
| !!! | GAGAATATCATAATTTTGTT+TGG | - | chr8.3:12404157-12404176 | MS.gene60149:CDS | 20.0% |
| !!! | GATTTTAATTTTGATTTGGT+AGG | - | chr8.3:12402701-12402720 | MS.gene60149:intron | 20.0% |
| !!! | TATTTTCTAAAAAACAAGGA+AGG | - | chr8.3:12404712-12404731 | MS.gene60149:intron | 20.0% |
| !!! | TTTTAGAACACAACAAATTT+GGG | - | chr8.3:12405304-12405323 | MS.gene60149:intron | 20.0% |
| !!! | TTTTATGCTGATACTAATTT+GGG | - | chr8.3:12405714-12405733 | MS.gene60149:CDS | 20.0% |
| ! | AAAGAGAGATATACGTAATA+AGG | + | chr8.3:12403399-12403418 | None:intergenic | 25.0% |
| ! | AAAGATAAAAGATGCAACAT+GGG | - | chr8.3:12404292-12404311 | MS.gene60149:intron | 25.0% |
| ! | AAGTGATGTAATTTATAGTG+TGG | - | chr8.3:12406246-12406265 | MS.gene60149:intron | 25.0% |
| ! | ACATGACAAGTACAAATTTA+TGG | + | chr8.3:12402859-12402878 | None:intergenic | 25.0% |
| ! | ACTTATTTGAGCTTATTTAC+TGG | + | chr8.3:12403081-12403100 | None:intergenic | 25.0% |
| ! | AGTGAAAAAAATTTCAAGGA+TGG | + | chr8.3:12406117-12406136 | None:intergenic | 25.0% |
| ! | AGTGAAGATTTAGAAGTTAA+TGG | - | chr8.3:12405449-12405468 | MS.gene60149:intron | 25.0% |
| ! | ATTACACTTTAATCTTTGGT+TGG | - | chr8.3:12403854-12403873 | MS.gene60149:intron | 25.0% |
| ! | ATTGGAAAACTTCTATACAA+AGG | + | chr8.3:12406913-12406932 | None:intergenic | 25.0% |
| ! | CGGAAAGCAAAAATAAAATA+TGG | + | chr8.3:12403461-12403480 | None:intergenic | 25.0% |
| ! | GTAAACATTAAACTCTATTC+AGG | - | chr8.3:12406156-12406175 | MS.gene60149:intron | 25.0% |
| ! | GTGAAGATTTAGAAGTTAAT+GGG | - | chr8.3:12405450-12405469 | MS.gene60149:intron | 25.0% |
| ! | GTGTAATAATATGTCAAAAC+AGG | + | chr8.3:12403841-12403860 | None:intergenic | 25.0% |
| ! | TAAAGATAAAAGATGCAACA+TGG | - | chr8.3:12404291-12404310 | MS.gene60149:intron | 25.0% |
| ! | TAACTTCATTCCAAACAAAT+TGG | + | chr8.3:12406717-12406736 | None:intergenic | 25.0% |
| ! | TCAAATGATGATCAAAATGT+AGG | - | chr8.3:12403425-12403444 | MS.gene60149:intron | 25.0% |
| ! | TCTATACAAAGGATTAATGA+AGG | + | chr8.3:12406902-12406921 | None:intergenic | 25.0% |
| ! | TGAAGATTTAGAAGTTAATG+GGG | - | chr8.3:12405451-12405470 | MS.gene60149:intron | 25.0% |
| ! | TTATGAATCCTTACTAATTG+AGG | - | chr8.3:12406412-12406431 | MS.gene60149:intron | 25.0% |
| !! | ACCTTAACAAGTTTTTAACA+AGG | - | chr8.3:12405554-12405573 | MS.gene60149:intron | 25.0% |
| !! | CAATTTTATTGTTCTCTGAT+GGG | - | chr8.3:12406929-12406948 | MS.gene60149:CDS | 25.0% |
| !!! | ATAGGTATAGTGTTTTGATT+AGG | - | chr8.3:12402740-12402759 | MS.gene60149:intron | 25.0% |
| !!! | ATCAGTTCTTTAATTTTCGT+TGG | - | chr8.3:12405089-12405108 | MS.gene60149:intron | 25.0% |
| !!! | CTTGAAATTTTTTTCACTGT+GGG | - | chr8.3:12406119-12406138 | MS.gene60149:intron | 25.0% |
| !!! | GTTTTTTGTATAAGCTATCT+TGG | - | chr8.3:12402989-12403008 | MS.gene60149:CDS | 25.0% |
| !!! | TACACTTTTCTAGTTCATTT+TGG | + | chr8.3:12406508-12406527 | None:intergenic | 25.0% |
| !!! | TATTTGCTTTTGTTTTGTCA+GGG | - | chr8.3:12405187-12405206 | MS.gene60149:intron | 25.0% |
| !!! | TATTTTATTTTTGCTTTCCG+TGG | - | chr8.3:12403461-12403480 | MS.gene60149:intron | 25.0% |
| !!! | TTATTTGCTTTTGTTTTGTC+AGG | - | chr8.3:12405186-12405205 | MS.gene60149:intron | 25.0% |
| !!! | TTGAAATTTTTTTCACTGTG+GGG | - | chr8.3:12406120-12406139 | MS.gene60149:intron | 25.0% |
| AAACACTTATGAGACTGTTT+GGG | + | chr8.3:12403055-12403074 | None:intergenic | 30.0% | |
| AAACTTCTTGCCATTGAAAT+AGG | + | chr8.3:12402800-12402819 | None:intergenic | 30.0% | |
| AAGAGTTATATTGCCTAACT+AGG | - | chr8.3:12403971-12403990 | MS.gene60149:intron | 30.0% | |
| AGCAAGCAATAAGGAAATAT+AGG | + | chr8.3:12406568-12406587 | None:intergenic | 30.0% | |
| CATATAGATGTGTTCAATTC+TGG | - | chr8.3:12403184-12403203 | MS.gene60149:intron | 30.0% | |
| CCAAAGTTTAAGAACGTATT+TGG | - | chr8.3:12404085-12404104 | MS.gene60149:CDS | 30.0% | |
| CCAAATACGTTCTTAAACTT+TGG | + | chr8.3:12404088-12404107 | None:intergenic | 30.0% | |
| CCACAGTGAAAAAAATTTCA+AGG | + | chr8.3:12406121-12406140 | None:intergenic | 30.0% | |
| CCATCAGAGAACAATAAAAT+TGG | + | chr8.3:12406931-12406950 | None:intergenic | 30.0% | |
| GACATACTTCACTTATAGTT+CGG | - | chr8.3:12404432-12404451 | MS.gene60149:CDS | 30.0% | |
| GATAAAATGTCAGACTCAAA+TGG | - | chr8.3:12407014-12407033 | MS.gene60149:CDS | 30.0% | |
| GATGTGTAAACATTGTTTCA+TGG | - | chr8.3:12405914-12405933 | MS.gene60149:intron | 30.0% | |
| GCATGTGAAAGAAAAATCAT+CGG | + | chr8.3:12405994-12406013 | None:intergenic | 30.0% | |
| GCATTTCATACCTATTTCAA+TGG | - | chr8.3:12402787-12402806 | MS.gene60149:intron | 30.0% | |
| GTTCCACAAATAAAACAAGT+TGG | + | chr8.3:12405005-12405024 | None:intergenic | 30.0% | |
| GTTTCTTTCACTTATGATGA+AGG | - | chr8.3:12406282-12406301 | MS.gene60149:intron | 30.0% | |
| TAAACACTTATGAGACTGTT+TGG | + | chr8.3:12403056-12403075 | None:intergenic | 30.0% | |
| TAGGGAGAAAATACACTAAA+TGG | + | chr8.3:12404644-12404663 | None:intergenic | 30.0% | |
| TCATCGAAGGAGAAATAATT+AGG | + | chr8.3:12402552-12402571 | None:intergenic | 30.0% | |
| TGAACACATCTATATGCAAA+AGG | + | chr8.3:12403180-12403199 | None:intergenic | 30.0% | |
| ! | AAAACAGGTTTTCATGGAAT+GGG | + | chr8.3:12403826-12403845 | None:intergenic | 30.0% |
| ! | AAACAAATTGGTAGCTTAAG+TGG | + | chr8.3:12406705-12406724 | None:intergenic | 30.0% |
| ! | ACAACAAATTTGGGATTATG+TGG | - | chr8.3:12405313-12405332 | MS.gene60149:intron | 30.0% |
| ! | ACTTAAGCTACCAATTTGTT+TGG | - | chr8.3:12406704-12406723 | MS.gene60149:CDS | 30.0% |
| ! | CAACAAATTTGGGATTATGT+GGG | - | chr8.3:12405314-12405333 | MS.gene60149:intron | 30.0% |
| ! | CCAATTTTATTGTTCTCTGA+TGG | - | chr8.3:12406928-12406947 | MS.gene60149:CDS | 30.0% |
| ! | CTAGGTTGGAAAAAATTGAT+AGG | + | chr8.3:12404336-12404355 | None:intergenic | 30.0% |
| ! | CTCTGTCACTGATTAATTAA+TGG | - | chr8.3:12406013-12406032 | MS.gene60149:CDS | 30.0% |
| ! | TATGTCAAAACAGGTTTTCA+TGG | + | chr8.3:12403832-12403851 | None:intergenic | 30.0% |
| ! | TGTATGATTTGTGGATTTGT+CGG | - | chr8.3:12405044-12405063 | MS.gene60149:intron | 30.0% |
| !! | GCCTTGTTAAAAACTTGTTA+AGG | + | chr8.3:12405558-12405577 | None:intergenic | 30.0% |
| !! | TGTGAATTTAGGGTTTTCTT+GGG | + | chr8.3:12402433-12402452 | None:intergenic | 30.0% |
| !! | TGTTTGCTGTGTAATTAACA+CGG | - | chr8.3:12405781-12405800 | MS.gene60149:intron | 30.0% |
| !! | TTCAACTTTGCTGTTAAAGA+AGG | + | chr8.3:12405477-12405496 | None:intergenic | 30.0% |
| !!! | AACAAAAGCACTGGTTTTAT+TGG | - | chr8.3:12404874-12404893 | MS.gene60149:intron | 30.0% |
| !!! | AAGCCAACTTGTTTTATTTG+TGG | - | chr8.3:12404999-12405018 | MS.gene60149:intron | 30.0% |
| !!! | CCTTGAAATTTTTTTCACTG+TGG | - | chr8.3:12406118-12406137 | MS.gene60149:intron | 30.0% |
| !!! | CTATCAATTTTTTCCAACCT+AGG | - | chr8.3:12404334-12404353 | MS.gene60149:intron | 30.0% |
| AAACCGAATGAAATCATCGA+AGG | + | chr8.3:12402565-12402584 | None:intergenic | 35.0% | |
| AACGAGTTTGAAAGTTTCTC+AGG | - | chr8.3:12404041-12404060 | MS.gene60149:CDS | 35.0% | |
| AAGCTATCTTGGACATCTTA+TGG | - | chr8.3:12403000-12403019 | MS.gene60149:CDS | 35.0% | |
| AAGGTAACAACTTCAACACA+TGG | - | chr8.3:12404584-12404603 | MS.gene60149:intron | 35.0% | |
| AATTGCTATGATACTCGCAA+TGG | - | chr8.3:12406314-12406333 | MS.gene60149:intron | 35.0% | |
| ACAACCAAATGTGTGACATT+AGG | + | chr8.3:12405940-12405959 | None:intergenic | 35.0% | |
| ACCTTTATACCATCCACTTT+GGG | + | chr8.3:12404217-12404236 | None:intergenic | 35.0% | |
| ACTTCTTGCCTCAATTAGTA+AGG | + | chr8.3:12406423-12406442 | None:intergenic | 35.0% | |
| AGAAAGAAATGTTGTTGCTG+AGG | - | chr8.3:12406532-12406551 | MS.gene60149:intron | 35.0% | |
| AGAAATAATTAGGAACAGCG+AGG | + | chr8.3:12402542-12402561 | None:intergenic | 35.0% | |
| AGACTCAAATGGAATAAAGG+AGG | - | chr8.3:12407025-12407044 | MS.gene60149:CDS | 35.0% | |
| AGATTAAAGAAGCAGAAGAG+AGG | - | chr8.3:12406668-12406687 | MS.gene60149:CDS | 35.0% | |
| AGCAAACAAAATCATACCAC+AGG | + | chr8.3:12405769-12405788 | None:intergenic | 35.0% | |
| AGCAAGAAAAACAGAAAGTC+TGG | - | chr8.3:12407092-12407111 | MS.gene60149:CDS | 35.0% | |
| ATACTTCACTTATAGTTCGG+AGG | - | chr8.3:12404435-12404454 | MS.gene60149:CDS | 35.0% | |
| ATGAAGACGATCAAGATAGT+GGG | + | chr8.3:12402595-12402614 | None:intergenic | 35.0% | |
| ATGAGCTTAATATCCTAGGT+TGG | + | chr8.3:12404350-12404369 | None:intergenic | 35.0% | |
| ATGATTCTTCATGAGAAGCT+TGG | - | chr8.3:12403924-12403943 | MS.gene60149:intron | 35.0% | |
| ATTGAAGTCGATGAATGAGA+GGG | - | chr8.3:12406844-12406863 | MS.gene60149:intron | 35.0% | |
| ATTGCTATGATACTCGCAAT+GGG | - | chr8.3:12406315-12406334 | MS.gene60149:intron | 35.0% | |
| CAGAGTTAAAGCAAGCAATA+AGG | + | chr8.3:12406577-12406596 | None:intergenic | 35.0% | |
| CATCCTGTTGTTGACATAAT+CGG | + | chr8.3:12404977-12404996 | None:intergenic | 35.0% | |
| CCAATTGAGATGTAAGAAGA+CGG | + | chr8.3:12406066-12406085 | None:intergenic | 35.0% | |
| CCAGAATGCATTGAATTTCT+GGG | - | chr8.3:12404482-12404501 | MS.gene60149:CDS | 35.0% | |
| CTAACTAGGATATTATCGTG+AGG | - | chr8.3:12403985-12404004 | MS.gene60149:CDS | 35.0% | |
| CTAGTTTCTTGAATGTCAAC+TGG | - | chr8.3:12406223-12406242 | MS.gene60149:intron | 35.0% | |
| CTCACGATAATATCCTAGTT+AGG | + | chr8.3:12403987-12404006 | None:intergenic | 35.0% | |
| CTTTAACAGCAAAGTTGAAG+CGG | - | chr8.3:12405478-12405497 | MS.gene60149:intron | 35.0% | |
| GACTCAAATGGAATAAAGGA+GGG | - | chr8.3:12407026-12407045 | MS.gene60149:CDS | 35.0% | |
| GTCAGACTCAAATGGAATAA+AGG | - | chr8.3:12407022-12407041 | MS.gene60149:CDS | 35.0% | |
| GTGAGAGAGAATTGGAATTA+GGG | + | chr8.3:12402506-12402525 | None:intergenic | 35.0% | |
| TACCTTTATACCATCCACTT+TGG | + | chr8.3:12404218-12404237 | None:intergenic | 35.0% | |
| TCACTTATGATGAAGGCTTT+GGG | - | chr8.3:12406289-12406308 | MS.gene60149:intron | 35.0% | |
| TCTCCTTCGATGATTTCATT+CGG | - | chr8.3:12402559-12402578 | MS.gene60149:intron | 35.0% | |
| TGAGGTGATTATGATTGTGT+GGG | - | chr8.3:12403642-12403661 | MS.gene60149:intron | 35.0% | |
| TGGAACATTAGATGATGTCT+GGG | - | chr8.3:12405019-12405038 | MS.gene60149:intron | 35.0% | |
| TGGAATGTGCAATGATAAGT+TGG | + | chr8.3:12404610-12404629 | None:intergenic | 35.0% | |
| TGTCATGTAGACATAGAGAT+AGG | - | chr8.3:12405836-12405855 | MS.gene60149:intron | 35.0% | |
| TTCACTTATGATGAAGGCTT+TGG | - | chr8.3:12406288-12406307 | MS.gene60149:intron | 35.0% | |
| TTCATCATCTTCTCTTCATC+AGG | - | chr8.3:12402610-12402629 | MS.gene60149:CDS | 35.0% | |
| ! | AAACAGGTTTTCATGGAATG+GGG | + | chr8.3:12403825-12403844 | None:intergenic | 35.0% |
| ! | AATGCATTGAATTTCTGGGA+AGG | - | chr8.3:12404486-12404505 | MS.gene60149:CDS | 35.0% |
| ! | ATTAGACTCTTAGAGCATCA+TGG | - | chr8.3:12403884-12403903 | MS.gene60149:intron | 35.0% |
| ! | CAAAACAGGTTTTCATGGAA+TGG | + | chr8.3:12403827-12403846 | None:intergenic | 35.0% |
| ! | CAGGATCAATCTAGAATTGA+CGG | - | chr8.3:12405362-12405381 | MS.gene60149:intron | 35.0% |
| ! | GATGATTTCATTCGGTTTTG+TGG | - | chr8.3:12402567-12402586 | MS.gene60149:intron | 35.0% |
| ! | TAATGGACATGAACAGATTG+TGG | - | chr8.3:12406030-12406049 | MS.gene60149:intron | 35.0% |
| ! | TTAGACTCTTAGAGCATCAT+GGG | - | chr8.3:12403885-12403904 | MS.gene60149:intron | 35.0% |
| ! | TTCACTGTATGTCTCTAGAA+GGG | - | chr8.3:12405405-12405424 | MS.gene60149:intron | 35.0% |
| ! | TTCTAAAAAACAAGGAAGGG+CGG | - | chr8.3:12404716-12404735 | MS.gene60149:intron | 35.0% |
| ! | TTTGCTGTGTAATTAACACG+GGG | - | chr8.3:12405783-12405802 | MS.gene60149:intron | 35.0% |
| !! | AAAAAGCTTCTCTGAAATCG+TGG | - | chr8.3:12405515-12405534 | MS.gene60149:intron | 35.0% |
| !! | AGGTAAGTAATAACGGGTTT+GGG | - | chr8.3:12402830-12402849 | MS.gene60149:CDS | 35.0% |
| !! | ATTGTGTGGGTTGATGTTTA+TGG | - | chr8.3:12403655-12403674 | MS.gene60149:intron | 35.0% |
| !! | ATTTAGGGTTTTCTTGGGAT+TGG | + | chr8.3:12402428-12402447 | None:intergenic | 35.0% |
| !! | CAACTTAGTTTGCAGCTTAT+AGG | - | chr8.3:12402909-12402928 | MS.gene60149:intron | 35.0% |
| !! | CTGTGAATTTAGGGTTTTCT+TGG | + | chr8.3:12402434-12402453 | None:intergenic | 35.0% |
| !! | GTTTGCTGTGTAATTAACAC+GGG | - | chr8.3:12405782-12405801 | MS.gene60149:intron | 35.0% |
| !! | TTTAGGGTTTTCTTGGGATT+GGG | + | chr8.3:12402427-12402446 | None:intergenic | 35.0% |
| !! | TTTGATTTGGTAGGAACGAT+GGG | - | chr8.3:12402710-12402729 | MS.gene60149:intron | 35.0% |
| !!! | ACACTTTTTAAGTCCCAAAG+TGG | - | chr8.3:12404201-12404220 | MS.gene60149:CDS | 35.0% |
| !!! | TTTTGATTTGGTAGGAACGA+TGG | - | chr8.3:12402709-12402728 | MS.gene60149:intron | 35.0% |
| !!! | TTTTTAAGTCCCAAAGTGGA+TGG | - | chr8.3:12404205-12404224 | MS.gene60149:CDS | 35.0% |
| AAAACAGAAAGTCTGGTCGA+AGG | - | chr8.3:12407099-12407118 | MS.gene60149:CDS | 40.0% | |
| AAGAAGCAGAAGAGAGGTAA+TGG | - | chr8.3:12406674-12406693 | MS.gene60149:CDS | 40.0% | |
| AAGGACATGCTATTCAGCAT+TGG | - | chr8.3:12405252-12405271 | MS.gene60149:intron | 40.0% | |
| AAGTTGTTACCTTGACCATG+AGG | + | chr8.3:12404577-12404596 | None:intergenic | 40.0% | |
| AGAATTGGAATTAGGGAGAG+AGG | + | chr8.3:12402499-12402518 | None:intergenic | 40.0% | |
| ATACCTGTTCCTCCAAATCA+AGG | + | chr8.3:12406871-12406890 | None:intergenic | 40.0% | |
| ATGAGCTTCCGATTAACCTA+AGG | + | chr8.3:12406622-12406641 | None:intergenic | 40.0% | |
| ATGGCCTAATGTCACACATT+TGG | - | chr8.3:12405933-12405952 | MS.gene60149:CDS | 40.0% | |
| ATTGATCCTGATTCAGTCGA+TGG | + | chr8.3:12405352-12405371 | None:intergenic | 40.0% | |
| ATTTGTGGATTTGTCGGATG+TGG | - | chr8.3:12405050-12405069 | MS.gene60149:intron | 40.0% | |
| CAGGGAAGACTTTAATGCTA+TGG | - | chr8.3:12405205-12405224 | MS.gene60149:intron | 40.0% | |
| CATTCTGCCCTTAGGTTAAT+CGG | - | chr8.3:12406611-12406630 | MS.gene60149:intron | 40.0% | |
| CATTGAAGTCGATGAATGAG+AGG | - | chr8.3:12406843-12406862 | MS.gene60149:intron | 40.0% | |
| CCCAGAAATTCAATGCATTC+TGG | + | chr8.3:12404485-12404504 | None:intergenic | 40.0% | |
| CCGTCTTCTTACATCTCAAT+TGG | - | chr8.3:12406063-12406082 | MS.gene60149:intron | 40.0% | |
| CCTGCTGAGGTAAGTAATAA+CGG | - | chr8.3:12402823-12402842 | MS.gene60149:CDS | 40.0% | |
| CTATGTCTACATGACAGTAC+AGG | + | chr8.3:12405832-12405851 | None:intergenic | 40.0% | |
| CTCTGCGTTCTGTGAATTTA+GGG | + | chr8.3:12402443-12402462 | None:intergenic | 40.0% | |
| CTGAGGTGATTATGATTGTG+TGG | - | chr8.3:12403641-12403660 | MS.gene60149:intron | 40.0% | |
| CTGCTGAGGTAAGTAATAAC+GGG | - | chr8.3:12402824-12402843 | MS.gene60149:CDS | 40.0% | |
| GATGAAGACGATCAAGATAG+TGG | + | chr8.3:12402596-12402615 | None:intergenic | 40.0% | |
| GCCAGAATGCATTGAATTTC+TGG | - | chr8.3:12404481-12404500 | MS.gene60149:CDS | 40.0% | |
| GCTCATGAGCTTAATATCCT+AGG | + | chr8.3:12404354-12404373 | None:intergenic | 40.0% | |
| GGTGAGAGAGAATTGGAATT+AGG | + | chr8.3:12402507-12402526 | None:intergenic | 40.0% | |
| GTCTGGGTTTGTATGATTTG+TGG | - | chr8.3:12405035-12405054 | MS.gene60149:intron | 40.0% | |
| GTGGAACATTAGATGATGTC+TGG | - | chr8.3:12405018-12405037 | MS.gene60149:intron | 40.0% | |
| GTTCACTGTATGTCTCTAGA+AGG | - | chr8.3:12405404-12405423 | MS.gene60149:intron | 40.0% | |
| TCCCAAAGTGGATGGTATAA+AGG | - | chr8.3:12404213-12404232 | MS.gene60149:CDS | 40.0% | |
| TGAAGACGATCAAGATAGTG+GGG | + | chr8.3:12402594-12402613 | None:intergenic | 40.0% | |
| TGAGCTTCCGATTAACCTAA+GGG | + | chr8.3:12406621-12406640 | None:intergenic | 40.0% | |
| TGCGTATTCCACTTGTATCA+GGG | + | chr8.3:12403726-12403745 | None:intergenic | 40.0% | |
| TGTTTACACATCACGTGTGA+CGG | + | chr8.3:12405906-12405925 | None:intergenic | 40.0% | |
| TTCACATTCCGAGTATTCCA+CGG | + | chr8.3:12403481-12403500 | None:intergenic | 40.0% | |
| TTTGCTTTCCGTGGAATACT+CGG | - | chr8.3:12403470-12403489 | MS.gene60149:intron | 40.0% | |
| ! | CTTAGAGCATCATGGGTATT+AGG | - | chr8.3:12403892-12403911 | MS.gene60149:intron | 40.0% |
| ! | TCACTGTATGTCTCTAGAAG+GGG | - | chr8.3:12405406-12405425 | MS.gene60149:intron | 40.0% |
| ! | TCGTGACAAGGTATTCGAAT+TGG | + | chr8.3:12404516-12404535 | None:intergenic | 40.0% |
| ! | TTATGTCCATCGACTGAATC+AGG | - | chr8.3:12405343-12405362 | MS.gene60149:intron | 40.0% |
| ! | TTTCAAGTGAAGTCGTGACA+AGG | + | chr8.3:12404528-12404547 | None:intergenic | 40.0% |
| !! | GAGGTAAGTAATAACGGGTT+TGG | - | chr8.3:12402829-12402848 | MS.gene60149:CDS | 40.0% |
| !! | TCTCTGAAATCGTGGAGTTA+GGG | - | chr8.3:12405523-12405542 | MS.gene60149:intron | 40.0% |
| !! | TTCTCTGAAATCGTGGAGTT+AGG | - | chr8.3:12405522-12405541 | MS.gene60149:intron | 40.0% |
| !!! | CTGTTTTTCTTGCTGTTTCC+AGG | + | chr8.3:12407086-12407105 | None:intergenic | 40.0% |
| !!! | GGTTTTATTGGTAATGCACG+TGG | - | chr8.3:12404886-12404905 | MS.gene60149:intron | 40.0% |
| AAAAGATGCAACATGGGCGA+TGG | - | chr8.3:12404298-12404317 | MS.gene60149:intron | 45.0% | |
| AAAGATGCAACATGGGCGAT+GGG | - | chr8.3:12404299-12404318 | MS.gene60149:intron | 45.0% | |
| AAATCATACCACAGGTGCAC+AGG | + | chr8.3:12405761-12405780 | None:intergenic | 45.0% | |
| ACAAGGAAGGGCGGAAATTA+AGG | - | chr8.3:12404725-12404744 | MS.gene60149:intron | 45.0% | |
| ACATGGGCGATGGGAAAAAA+TGG | - | chr8.3:12404308-12404327 | MS.gene60149:intron | 45.0% | |
| ACCAAGATCCAAGCAAACAG+AGG | + | chr8.3:12403593-12403612 | None:intergenic | 45.0% | |
| AGACACTTCATTCTGCCCTT+AGG | - | chr8.3:12406603-12406622 | MS.gene60149:intron | 45.0% | |
| AGCGACAAGCTCACTTTAAG+TGG | - | chr8.3:12405653-12405672 | MS.gene60149:intron | 45.0% | |
| ATTTCTGTACAACCAGCTGG+AGG | + | chr8.3:12403519-12403538 | None:intergenic | 45.0% | |
| ATTTGGTAGGAACGATGGGA+TGG | - | chr8.3:12402714-12402733 | MS.gene60149:intron | 45.0% | |
| CCAAGATCCAAGCAAACAGA+GGG | + | chr8.3:12403592-12403611 | None:intergenic | 45.0% | |
| CCGTTATTACTTACCTCAGC+AGG | + | chr8.3:12402826-12402845 | None:intergenic | 45.0% | |
| CCTAAATTCACAGAACGCAG+AGG | - | chr8.3:12402441-12402460 | MS.gene60149:CDS | 45.0% | |
| CCTCTGCGTTCTGTGAATTT+AGG | + | chr8.3:12402444-12402463 | None:intergenic | 45.0% | |
| CGCTGTCTTCAATTTCTCTG+AGG | - | chr8.3:12403624-12403643 | MS.gene60149:intron | 45.0% | |
| CGGAATGTGAAGAAGTTGCT+GGG | - | chr8.3:12403490-12403509 | MS.gene60149:intron | 45.0% | |
| CTTCTCCACTGCTTCAGATA+CGG | + | chr8.3:12406459-12406478 | None:intergenic | 45.0% | |
| GAATGAGAGGGTCCTTGATT+TGG | - | chr8.3:12406856-12406875 | MS.gene60149:CDS | 45.0% | |
| GAGAAGAGGTGAGAGAGAAT+TGG | + | chr8.3:12402514-12402533 | None:intergenic | 45.0% | |
| GTGCGTATTCCACTTGTATC+AGG | + | chr8.3:12403727-12403746 | None:intergenic | 45.0% | |
| GTGGACATATTTGTCTTGCC+AGG | - | chr8.3:12403789-12403808 | MS.gene60149:intron | 45.0% | |
| TAGAATTGACGGCAAGTCGA+AGG | - | chr8.3:12405373-12405392 | MS.gene60149:intron | 45.0% | |
| TCGGAATGTGAAGAAGTTGC+TGG | - | chr8.3:12403489-12403508 | MS.gene60149:intron | 45.0% | |
| TGAAACTCACCCAAGCAAAC+TGG | + | chr8.3:12403552-12403571 | None:intergenic | 45.0% | |
| TGTTACCTTGACCATGAGGA+GGG | + | chr8.3:12404573-12404592 | None:intergenic | 45.0% | |
| TGTTTGAATCCCAGAGAGAC+TGG | - | chr8.3:12403699-12403718 | MS.gene60149:intron | 45.0% | |
| TTGAAGCGGTATGTTTCTCG+TGG | - | chr8.3:12405492-12405511 | MS.gene60149:intron | 45.0% | |
| TTGTTACCTTGACCATGAGG+AGG | + | chr8.3:12404574-12404593 | None:intergenic | 45.0% | |
| ! | AACACGGGGCTTTATGCATA+AGG | - | chr8.3:12405797-12405816 | MS.gene60149:intron | 45.0% |
| ! | ACCAACATGTCCAGTTTGCT+TGG | - | chr8.3:12403539-12403558 | MS.gene60149:intron | 45.0% |
| ! | CAAGAAGTTTTCTCCTGCTG+AGG | - | chr8.3:12402810-12402829 | MS.gene60149:CDS | 45.0% |
| ! | CCAACATGTCCAGTTTGCTT+GGG | - | chr8.3:12403540-12403559 | MS.gene60149:intron | 45.0% |
| ! | CTGCCGATTATGTCAACAAC+AGG | - | chr8.3:12404971-12404990 | MS.gene60149:intron | 45.0% |
| ! | GGTATTTCTGTACAACCAGC+TGG | + | chr8.3:12403522-12403541 | None:intergenic | 45.0% |
| ! | TGCTTCGCTAACAAAAGCAC+TGG | - | chr8.3:12404865-12404884 | MS.gene60149:intron | 45.0% |
| !! | ATGTCCACTTTGAGACGCAA+GGG | + | chr8.3:12403777-12403796 | None:intergenic | 45.0% |
| !! | CGCAAGGGCATTGAAATGAA+TGG | + | chr8.3:12403762-12403781 | None:intergenic | 45.0% |
| !! | TATGTCCACTTTGAGACGCA+AGG | + | chr8.3:12403778-12403797 | None:intergenic | 45.0% |
| !! | TTCTTGCTGTTTCCAGGAGA+AGG | + | chr8.3:12407080-12407099 | None:intergenic | 45.0% |
| AACAAAAGCCTGTGCACCTG+TGG | - | chr8.3:12405750-12405769 | MS.gene60149:intron | 50.0% | |
| AAGATGAGTTCGGGATCGAG+TGG | + | chr8.3:12402393-12402412 | None:intergenic | 50.0% | |
| AATGCCCTTGCGTCTCAAAG+TGG | - | chr8.3:12403770-12403789 | MS.gene60149:intron | 50.0% | |
| ACAGAAAGTCTGGTCGAAGG+CGG | - | chr8.3:12407102-12407121 | MS.gene60149:CDS | 50.0% | |
| ACAGCGAGGATGAAGAGAAG+AGG | + | chr8.3:12402528-12402547 | None:intergenic | 50.0% | |
| AGACTGGACCCTGATACAAG+TGG | - | chr8.3:12403715-12403734 | MS.gene60149:intron | 50.0% | |
| ATCGTGACCCTCTGTTTGCT+TGG | - | chr8.3:12403582-12403601 | MS.gene60149:intron | 50.0% | |
| CCCAAGCAAACTGGACATGT+TGG | + | chr8.3:12403543-12403562 | None:intergenic | 50.0% | |
| CCCTCTGTTTGCTTGGATCT+TGG | - | chr8.3:12403589-12403608 | MS.gene60149:intron | 50.0% | |
| GAATGGGGAAGCTACATACC+TGG | + | chr8.3:12403810-12403829 | None:intergenic | 50.0% | |
| GGAACGATGGGATGGAAGAT+AGG | - | chr8.3:12402722-12402741 | MS.gene60149:intron | 50.0% | |
| GTGGATTTGTCGGATGTGGA+AGG | - | chr8.3:12405054-12405073 | MS.gene60149:intron | 50.0% | |
| GTTACCTTGACCATGAGGAG+GGG | + | chr8.3:12404572-12404591 | None:intergenic | 50.0% | |
| TATCAGGGTCCAGTCTCTCT+GGG | + | chr8.3:12403711-12403730 | None:intergenic | 50.0% | |
| TGGAGCGGAGAAGATGAGTT+CGG | + | chr8.3:12402403-12402422 | None:intergenic | 50.0% | |
| TTACCTTGACCATGAGGAGG+GGG | + | chr8.3:12404571-12404590 | None:intergenic | 50.0% | |
| ! | AAGCTCCGTATCTGAAGCAG+TGG | - | chr8.3:12406451-12406470 | MS.gene60149:intron | 50.0% |
| ! | CGTATCTGAAGCAGTGGAGA+AGG | - | chr8.3:12406457-12406476 | MS.gene60149:intron | 50.0% |
| ! | GGGTTTTCTTGGGATTGGGT+TGG | + | chr8.3:12402423-12402442 | None:intergenic | 50.0% |
| !! | GGTCCTTGATTTGGAGGAAC+AGG | - | chr8.3:12406865-12406884 | MS.gene60149:CDS | 50.0% |
| !! | TCAATGCATTCTGGCTCGCT+TGG | + | chr8.3:12404476-12404495 | None:intergenic | 50.0% |
| !! | TGAGAGGGTCCTTGATTTGG+AGG | - | chr8.3:12406859-12406878 | MS.gene60149:CDS | 50.0% |
| !! | TTCTTGGGATTGGGTTGGAG+CGG | + | chr8.3:12402418-12402437 | None:intergenic | 50.0% |
| GAAGGTTGCTCATGAGCCAC+TGG | + | chr8.3:12407062-12407081 | None:intergenic | 55.0% | |
| GCTCATGAGCAACCTTCTCC+TGG | - | chr8.3:12407065-12407084 | MS.gene60149:CDS | 55.0% | |
| GGAGCGGAGAAGATGAGTTC+GGG | + | chr8.3:12402402-12402421 | None:intergenic | 55.0% | |
| GGAGGGAACAGTCTTACCAG+TGG | - | chr8.3:12407043-12407062 | MS.gene60149:CDS | 55.0% | |
| GTATCAGGGTCCAGTCTCTC+TGG | + | chr8.3:12403712-12403731 | None:intergenic | 55.0% | |
| GTGGAGAAGGCTGCAACTTC+TGG | - | chr8.3:12406470-12406489 | MS.gene60149:intron | 55.0% | |
| TACCTTGACCATGAGGAGGG+GGG | + | chr8.3:12404570-12404589 | None:intergenic | 55.0% | |
| ! | GAGAGGAGTGTGAAGCGCTT+CGG | + | chr8.3:12402482-12402501 | None:intergenic | 55.0% |
| ! | GATTCTCGTCGTCGACTGAG+TGG | + | chr8.3:12402371-12402390 | None:intergenic | 55.0% |
| GGCTGCAACTTCTGGCATGC+TGG | - | chr8.3:12406478-12406497 | MS.gene60149:intron | 60.0% | |
| ! | CGTCGTCGACTGAGTGGACT+CGG | + | chr8.3:12402365-12402384 | None:intergenic | 60.0% |
| CACCCCCCTCCTCATGGTCA+AGG | - | chr8.3:12404565-12404584 | MS.gene60149:intron | 65.0% | |
| CCTTTGCACCCCCCTCCTCA+TGG | - | chr8.3:12404559-12404578 | MS.gene60149:intron | 65.0% | |
| GTCTGGTCGAAGGCGGCGTT+AGG | - | chr8.3:12407109-12407128 | MS.gene60149:CDS | 65.0% | |
| GTTGCTGGGACTCCTCCAGC+TGG | - | chr8.3:12403504-12403523 | MS.gene60149:intron | 65.0% | |
| ! | AGGAGGGGGGTGCAAAGGCA+AGG | + | chr8.3:12404557-12404576 | None:intergenic | 65.0% |
| ! | CCATGAGGAGGGGGGTGCAA+AGG | + | chr8.3:12404562-12404581 | None:intergenic | 65.0% |
| ! | CGTCGACTGAGTGGACTCGG+AGG | + | chr8.3:12402362-12402381 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 12402351 | 12407130 | 12402351 | ID=MS.gene60149 |
| chr8.3 | mRNA | 12402351 | 12407130 | 12402351 | ID=MS.gene60149.t1;Parent=MS.gene60149 |
| chr8.3 | exon | 12406850 | 12407130 | 12406850 | ID=MS.gene60149.t1.exon1;Parent=MS.gene60149.t1 |
| chr8.3 | CDS | 12406850 | 12407130 | 12406850 | ID=cds.MS.gene60149.t1;Parent=MS.gene60149.t1 |
| chr8.3 | exon | 12406650 | 12406758 | 12406650 | ID=MS.gene60149.t1.exon2;Parent=MS.gene60149.t1 |
| chr8.3 | CDS | 12406650 | 12406758 | 12406650 | ID=cds.MS.gene60149.t1;Parent=MS.gene60149.t1 |
| chr8.3 | exon | 12405920 | 12406034 | 12405920 | ID=MS.gene60149.t1.exon3;Parent=MS.gene60149.t1 |
| chr8.3 | CDS | 12405920 | 12406034 | 12405920 | ID=cds.MS.gene60149.t1;Parent=MS.gene60149.t1 |
| chr8.3 | exon | 12405671 | 12405768 | 12405671 | ID=MS.gene60149.t1.exon4;Parent=MS.gene60149.t1 |
| chr8.3 | CDS | 12405671 | 12405768 | 12405671 | ID=cds.MS.gene60149.t1;Parent=MS.gene60149.t1 |
| chr8.3 | exon | 12404406 | 12404512 | 12404406 | ID=MS.gene60149.t1.exon5;Parent=MS.gene60149.t1 |
| chr8.3 | CDS | 12404406 | 12404512 | 12404406 | ID=cds.MS.gene60149.t1;Parent=MS.gene60149.t1 |
| chr8.3 | exon | 12403982 | 12404237 | 12403982 | ID=MS.gene60149.t1.exon6;Parent=MS.gene60149.t1 |
| chr8.3 | CDS | 12403982 | 12404237 | 12403982 | ID=cds.MS.gene60149.t1;Parent=MS.gene60149.t1 |
| chr8.3 | exon | 12403382 | 12403435 | 12403382 | ID=MS.gene60149.t1.exon7;Parent=MS.gene60149.t1 |
| chr8.3 | CDS | 12403382 | 12403435 | 12403382 | ID=cds.MS.gene60149.t1;Parent=MS.gene60149.t1 |
| chr8.3 | exon | 12402928 | 12403071 | 12402928 | ID=MS.gene60149.t1.exon8;Parent=MS.gene60149.t1 |
| chr8.3 | CDS | 12402928 | 12403071 | 12402928 | ID=cds.MS.gene60149.t1;Parent=MS.gene60149.t1 |
| chr8.3 | exon | 12402792 | 12402856 | 12402792 | ID=MS.gene60149.t1.exon9;Parent=MS.gene60149.t1 |
| chr8.3 | CDS | 12402792 | 12402856 | 12402792 | ID=cds.MS.gene60149.t1;Parent=MS.gene60149.t1 |
| chr8.3 | exon | 12402595 | 12402649 | 12402595 | ID=MS.gene60149.t1.exon10;Parent=MS.gene60149.t1 |
| chr8.3 | CDS | 12402595 | 12402649 | 12402595 | ID=cds.MS.gene60149.t1;Parent=MS.gene60149.t1 |
| chr8.3 | exon | 12402351 | 12402509 | 12402351 | ID=MS.gene60149.t1.exon11;Parent=MS.gene60149.t1 |
| chr8.3 | CDS | 12402351 | 12402509 | 12402351 | ID=cds.MS.gene60149.t1;Parent=MS.gene60149.t1 |
| Gene Sequence |
| Protein sequence |
