Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60378.t1 | AES90851.2 | 95.1 | 575 | 27 | 1 | 1 | 574 | 281 | 855 | 0.00E+00 | 1101.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60378.t1 | Q9FUR2 | 52.1 | 641 | 223 | 12 | 2 | 560 | 5 | 643 | 1.1e-165 | 584.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60378.t1 | G7JHN0 | 95.1 | 575 | 27 | 1 | 1 | 574 | 281 | 855 | 0.0e+00 | 1101.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene055505 | MS.gene60378 | 0.813161 | 2.94E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60378.t1 | MTR_4g098850 | 95.826 | 575 | 23 | 1 | 1 | 574 | 281 | 855 | 0.0 | 1140 |
MS.gene60378.t1 | MTR_4g098850 | 88.288 | 222 | 26 | 0 | 353 | 574 | 2 | 223 | 7.68e-138 | 421 |
MS.gene60378.t1 | MTR_5g014090 | 62.898 | 628 | 163 | 11 | 2 | 566 | 5 | 625 | 0.0 | 738 |
MS.gene60378.t1 | MTR_5g014090 | 59.961 | 512 | 136 | 10 | 2 | 451 | 5 | 509 | 0.0 | 555 |
MS.gene60378.t1 | MTR_1g097690 | 40.328 | 610 | 283 | 11 | 4 | 557 | 12 | 596 | 1.69e-149 | 444 |
MS.gene60378.t1 | MTR_1g103330 | 37.669 | 592 | 310 | 12 | 4 | 563 | 7 | 571 | 2.48e-125 | 380 |
MS.gene60378.t1 | MTR_1g071680 | 38.612 | 562 | 286 | 9 | 4 | 546 | 7 | 528 | 1.57e-124 | 378 |
MS.gene60378.t1 | MTR_7g095260 | 38.621 | 580 | 294 | 11 | 4 | 563 | 8 | 545 | 8.47e-124 | 375 |
MS.gene60378.t1 | MTR_7g095260 | 40.625 | 512 | 259 | 9 | 56 | 563 | 23 | 493 | 9.68e-119 | 361 |
MS.gene60378.t1 | MTR_1g097690 | 37.352 | 506 | 239 | 9 | 3 | 452 | 11 | 494 | 1.28e-104 | 324 |
MS.gene60378.t1 | MTR_6g042240 | 54.962 | 262 | 115 | 2 | 296 | 557 | 316 | 574 | 2.98e-99 | 313 |
MS.gene60378.t1 | MTR_6g042240 | 54.962 | 262 | 115 | 2 | 296 | 557 | 356 | 614 | 1.23e-98 | 313 |
MS.gene60378.t1 | MTR_6g042240 | 54.962 | 262 | 115 | 2 | 296 | 557 | 369 | 627 | 2.57e-98 | 312 |
MS.gene60378.t1 | MTR_5g006820 | 48.727 | 275 | 134 | 3 | 292 | 563 | 340 | 610 | 5.82e-87 | 282 |
MS.gene60378.t1 | MTR_5g006820 | 36.145 | 166 | 86 | 3 | 14 | 161 | 17 | 180 | 1.42e-23 | 105 |
MS.gene60378.t1 | MTR_8g043480 | 49.281 | 278 | 123 | 4 | 271 | 541 | 15 | 281 | 7.32e-86 | 269 |
MS.gene60378.t1 | MTR_8g043480 | 49.281 | 278 | 123 | 4 | 271 | 541 | 145 | 411 | 6.08e-84 | 269 |
MS.gene60378.t1 | MTR_8g043480 | 45.833 | 72 | 39 | 0 | 75 | 146 | 12 | 83 | 2.74e-14 | 75.5 |
MS.gene60378.t1 | MTR_8g043480 | 49.281 | 278 | 123 | 4 | 271 | 541 | 210 | 476 | 2.82e-83 | 269 |
MS.gene60378.t1 | MTR_8g043480 | 45.833 | 72 | 39 | 0 | 75 | 146 | 77 | 148 | 2.43e-14 | 76.3 |
MS.gene60378.t1 | MTR_6g072010 | 48.261 | 230 | 118 | 1 | 312 | 540 | 155 | 384 | 7.95e-79 | 254 |
MS.gene60378.t1 | MTR_6g072010 | 45.122 | 82 | 42 | 2 | 62 | 142 | 37 | 116 | 4.58e-15 | 77.8 |
MS.gene60378.t1 | MTR_8g091360 | 43.581 | 296 | 157 | 3 | 280 | 565 | 280 | 575 | 1.12e-78 | 259 |
MS.gene60378.t1 | MTR_8g091360 | 53.623 | 69 | 32 | 0 | 74 | 142 | 142 | 210 | 2.93e-17 | 85.5 |
MS.gene60378.t1 | MTR_6g072010 | 48.261 | 230 | 118 | 1 | 312 | 540 | 166 | 395 | 1.34e-78 | 253 |
MS.gene60378.t1 | MTR_6g072010 | 45.122 | 82 | 42 | 2 | 62 | 142 | 48 | 127 | 5.63e-15 | 77.4 |
MS.gene60378.t1 | MTR_7g100070 | 48.638 | 257 | 122 | 3 | 308 | 564 | 171 | 417 | 3.61e-78 | 254 |
MS.gene60378.t1 | MTR_7g100070 | 37.107 | 159 | 84 | 2 | 10 | 152 | 11 | 169 | 6.42e-24 | 105 |
MS.gene60378.t1 | MTR_7g100070 | 48.638 | 257 | 122 | 3 | 308 | 564 | 170 | 416 | 3.83e-78 | 254 |
MS.gene60378.t1 | MTR_7g100070 | 37.342 | 158 | 84 | 2 | 10 | 152 | 11 | 168 | 4.53e-24 | 105 |
MS.gene60378.t1 | MTR_7g100070 | 50.000 | 242 | 114 | 2 | 308 | 549 | 211 | 445 | 2.04e-77 | 253 |
MS.gene60378.t1 | MTR_7g100070 | 37.107 | 159 | 84 | 2 | 10 | 152 | 51 | 209 | 6.87e-24 | 105 |
MS.gene60378.t1 | MTR_1g038810 | 49.587 | 242 | 118 | 2 | 303 | 540 | 166 | 407 | 1.33e-75 | 247 |
MS.gene60378.t1 | MTR_1g038810 | 36.735 | 147 | 77 | 3 | 1 | 145 | 1 | 133 | 8.39e-15 | 77.4 |
MS.gene60378.t1 | MTR_1g038810 | 49.587 | 242 | 118 | 2 | 303 | 540 | 170 | 411 | 1.48e-75 | 247 |
MS.gene60378.t1 | MTR_1g038810 | 37.333 | 150 | 76 | 4 | 1 | 145 | 1 | 137 | 7.83e-17 | 83.6 |
MS.gene60378.t1 | MTR_6g009260 | 41.176 | 340 | 170 | 9 | 263 | 572 | 96 | 435 | 1.82e-75 | 247 |
MS.gene60378.t1 | MTR_6g009260 | 44.156 | 77 | 41 | 1 | 68 | 142 | 51 | 127 | 6.81e-15 | 77.4 |
MS.gene60378.t1 | MTR_8g091360 | 42.308 | 182 | 96 | 2 | 280 | 452 | 280 | 461 | 2.28e-42 | 159 |
MS.gene60378.t1 | MTR_8g091360 | 53.623 | 69 | 32 | 0 | 74 | 142 | 142 | 210 | 2.20e-17 | 85.5 |
MS.gene60378.t1 | MTR_1g078100 | 32.841 | 271 | 141 | 7 | 309 | 542 | 339 | 605 | 1.32e-32 | 134 |
MS.gene60378.t1 | MTR_1g078100 | 32.841 | 271 | 141 | 7 | 309 | 542 | 328 | 594 | 1.40e-32 | 133 |
MS.gene60378.t1 | MTR_6g092670 | 31.164 | 292 | 155 | 9 | 309 | 567 | 643 | 921 | 1.68e-32 | 134 |
MS.gene60378.t1 | MTR_1g078100 | 32.841 | 271 | 141 | 7 | 309 | 542 | 608 | 874 | 1.89e-32 | 133 |
MS.gene60378.t1 | MTR_1g021730 | 33.333 | 165 | 96 | 7 | 345 | 507 | 124 | 276 | 3.02e-17 | 83.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60378.t1 | AT4G18010 | 52.730 | 641 | 219 | 12 | 2 | 560 | 5 | 643 | 0.0 | 606 |
MS.gene60378.t1 | AT4G18010 | 51.468 | 579 | 200 | 11 | 2 | 501 | 5 | 581 | 0.0 | 526 |
MS.gene60378.t1 | AT1G34120 | 40.105 | 571 | 308 | 7 | 7 | 558 | 27 | 582 | 6.72e-140 | 418 |
MS.gene60378.t1 | AT1G34120 | 40.000 | 575 | 307 | 7 | 7 | 558 | 27 | 586 | 2.52e-139 | 417 |
MS.gene60378.t1 | AT1G34120 | 40.000 | 575 | 306 | 8 | 7 | 558 | 27 | 585 | 1.61e-137 | 412 |
MS.gene60378.t1 | AT1G71710 | 37.674 | 645 | 305 | 17 | 4 | 557 | 7 | 645 | 4.03e-133 | 403 |
MS.gene60378.t1 | AT1G71710 | 37.674 | 645 | 305 | 17 | 4 | 557 | 16 | 654 | 4.69e-133 | 403 |
MS.gene60378.t1 | AT2G32010 | 37.436 | 585 | 312 | 12 | 14 | 563 | 17 | 582 | 2.54e-122 | 373 |
MS.gene60378.t1 | AT2G32010 | 37.436 | 585 | 312 | 12 | 14 | 563 | 17 | 582 | 2.54e-122 | 373 |
MS.gene60378.t1 | AT2G32010 | 37.436 | 585 | 312 | 12 | 14 | 563 | 17 | 582 | 2.54e-122 | 373 |
MS.gene60378.t1 | AT2G32010 | 37.436 | 585 | 312 | 12 | 14 | 563 | 17 | 582 | 2.54e-122 | 373 |
MS.gene60378.t1 | AT1G34120 | 39.101 | 445 | 245 | 6 | 125 | 558 | 2 | 431 | 1.92e-99 | 309 |
MS.gene60378.t1 | AT1G34120 | 37.500 | 456 | 253 | 6 | 7 | 443 | 27 | 469 | 4.43e-91 | 288 |
MS.gene60378.t1 | AT3G63240 | 46.505 | 329 | 147 | 4 | 266 | 565 | 209 | 537 | 7.57e-90 | 287 |
MS.gene60378.t1 | AT3G63240 | 41.176 | 170 | 86 | 3 | 4 | 161 | 7 | 174 | 1.56e-29 | 123 |
MS.gene60378.t1 | AT3G63240 | 46.505 | 329 | 147 | 4 | 266 | 565 | 209 | 537 | 7.57e-90 | 287 |
MS.gene60378.t1 | AT3G63240 | 41.176 | 170 | 86 | 3 | 4 | 161 | 7 | 174 | 1.56e-29 | 123 |
MS.gene60378.t1 | AT1G05470 | 50.193 | 259 | 125 | 2 | 308 | 563 | 348 | 605 | 1.04e-88 | 286 |
MS.gene60378.t1 | AT1G05470 | 36.364 | 176 | 94 | 3 | 2 | 161 | 5 | 178 | 1.47e-28 | 120 |
MS.gene60378.t1 | AT1G05470 | 50.193 | 259 | 125 | 2 | 308 | 563 | 348 | 605 | 1.04e-88 | 286 |
MS.gene60378.t1 | AT1G05470 | 36.364 | 176 | 94 | 3 | 2 | 161 | 5 | 178 | 1.47e-28 | 120 |
MS.gene60378.t1 | AT5G04980 | 50.204 | 245 | 118 | 2 | 308 | 548 | 156 | 400 | 2.86e-83 | 266 |
MS.gene60378.t1 | AT5G04980 | 50.204 | 245 | 118 | 2 | 308 | 548 | 191 | 435 | 1.20e-82 | 265 |
MS.gene60378.t1 | AT5G04980 | 46.269 | 67 | 36 | 0 | 71 | 137 | 7 | 73 | 4.33e-13 | 72.0 |
MS.gene60378.t1 | AT5G04980 | 50.204 | 245 | 118 | 2 | 308 | 548 | 191 | 435 | 1.20e-82 | 265 |
MS.gene60378.t1 | AT5G04980 | 46.269 | 67 | 36 | 0 | 71 | 137 | 7 | 73 | 4.33e-13 | 72.0 |
MS.gene60378.t1 | AT5G04980 | 50.204 | 245 | 118 | 2 | 308 | 548 | 220 | 464 | 1.34e-82 | 266 |
MS.gene60378.t1 | AT5G04980 | 46.269 | 67 | 36 | 0 | 71 | 137 | 36 | 102 | 3.44e-13 | 72.4 |
MS.gene60378.t1 | AT5G65090 | 44.928 | 276 | 147 | 2 | 295 | 565 | 185 | 460 | 7.16e-81 | 261 |
MS.gene60378.t1 | AT5G65090 | 48.315 | 89 | 41 | 1 | 65 | 153 | 2 | 85 | 8.75e-19 | 89.7 |
MS.gene60378.t1 | AT2G37440 | 46.758 | 293 | 136 | 4 | 263 | 540 | 56 | 343 | 9.46e-81 | 259 |
MS.gene60378.t1 | AT2G37440 | 42.045 | 88 | 32 | 1 | 77 | 145 | 3 | 90 | 7.85e-15 | 77.0 |
MS.gene60378.t1 | AT5G65090 | 44.928 | 276 | 147 | 2 | 295 | 565 | 248 | 523 | 4.54e-80 | 261 |
MS.gene60378.t1 | AT5G65090 | 48.315 | 89 | 41 | 1 | 65 | 153 | 65 | 148 | 1.10e-18 | 89.7 |
MS.gene60378.t1 | AT5G65090 | 44.928 | 276 | 147 | 2 | 295 | 565 | 248 | 523 | 4.54e-80 | 261 |
MS.gene60378.t1 | AT5G65090 | 48.315 | 89 | 41 | 1 | 65 | 153 | 65 | 148 | 1.10e-18 | 89.7 |
MS.gene60378.t1 | AT2G01900 | 42.724 | 323 | 175 | 4 | 241 | 553 | 75 | 397 | 1.33e-78 | 254 |
MS.gene60378.t1 | AT2G01900 | 34.783 | 138 | 78 | 3 | 11 | 147 | 7 | 133 | 2.17e-14 | 75.9 |
MS.gene60378.t1 | AT2G01900 | 42.724 | 323 | 175 | 4 | 241 | 553 | 83 | 405 | 1.65e-78 | 254 |
MS.gene60378.t1 | AT2G01900 | 34.868 | 152 | 83 | 4 | 1 | 147 | 1 | 141 | 9.02e-16 | 80.1 |
MS.gene60378.t1 | AT2G37440 | 50.000 | 256 | 121 | 3 | 287 | 540 | 174 | 424 | 7.73e-78 | 254 |
MS.gene60378.t1 | AT2G37440 | 34.395 | 157 | 88 | 2 | 5 | 149 | 6 | 159 | 2.41e-23 | 103 |
MS.gene60378.t1 | AT2G37440 | 50.000 | 256 | 121 | 3 | 287 | 540 | 174 | 424 | 7.73e-78 | 254 |
MS.gene60378.t1 | AT2G37440 | 34.395 | 157 | 88 | 2 | 5 | 149 | 6 | 159 | 2.41e-23 | 103 |
MS.gene60378.t1 | AT2G01900 | 41.796 | 323 | 169 | 5 | 241 | 553 | 75 | 388 | 5.66e-74 | 242 |
MS.gene60378.t1 | AT2G01900 | 34.783 | 138 | 78 | 3 | 11 | 147 | 7 | 133 | 2.36e-14 | 75.9 |
MS.gene60378.t1 | AT2G31830 | 34.956 | 226 | 116 | 5 | 309 | 507 | 661 | 882 | 2.33e-33 | 136 |
MS.gene60378.t1 | AT2G31830 | 34.956 | 226 | 116 | 5 | 309 | 507 | 661 | 882 | 2.67e-33 | 136 |
MS.gene60378.t1 | AT2G43900 | 31.206 | 282 | 147 | 6 | 309 | 548 | 658 | 934 | 3.39e-33 | 136 |
MS.gene60378.t1 | AT2G43900 | 31.206 | 282 | 147 | 6 | 309 | 548 | 658 | 934 | 3.73e-33 | 136 |
MS.gene60378.t1 | AT2G31830 | 34.956 | 226 | 116 | 5 | 309 | 507 | 661 | 882 | 4.12e-33 | 135 |
MS.gene60378.t1 | AT1G05630 | 30.690 | 290 | 159 | 8 | 309 | 567 | 652 | 930 | 8.10e-33 | 135 |
MS.gene60378.t1 | AT1G05630 | 34.513 | 226 | 117 | 5 | 309 | 507 | 652 | 873 | 1.52e-32 | 134 |
MS.gene60378.t1 | AT1G65580 | 29.897 | 291 | 148 | 8 | 300 | 542 | 342 | 624 | 1.87e-32 | 133 |
MS.gene60378.t1 | AT1G65580 | 29.897 | 291 | 148 | 8 | 300 | 542 | 608 | 890 | 2.48e-32 | 133 |
MS.gene60378.t1 | AT1G47510 | 27.600 | 250 | 156 | 9 | 292 | 532 | 30 | 263 | 4.71e-19 | 87.8 |
MS.gene60378.t1 | AT1G47510 | 27.600 | 250 | 156 | 9 | 292 | 532 | 92 | 325 | 1.51e-18 | 87.4 |
MS.gene60378.t1 | AT1G05630 | 25.788 | 349 | 200 | 16 | 242 | 567 | 652 | 964 | 7.72e-17 | 85.1 |
MS.gene60378.t1 | AT1G47510 | 36.134 | 119 | 64 | 4 | 421 | 532 | 149 | 262 | 3.95e-12 | 67.4 |
Find 103 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCATCCTCATCCTCTTTA+AGG | 0.123467 | 8.1:-23902249 | None:intergenic |
AAAGAAGAGTTTCTTCTAAT+TGG | 0.147774 | 8.1:-23899943 | None:intergenic |
TCAAGTTGGTGTTGGTCTTA+TGG | 0.149567 | 8.1:+23900485 | MS.gene60378:CDS |
CTAATGATTGCATCCCATTT+TGG | 0.152402 | 8.1:-23899856 | None:intergenic |
CCATCAGATATTTACATTAT+TGG | 0.166162 | 8.1:+23899467 | MS.gene60378:CDS |
CAAGTTGGTGTTGGTCTTAT+GGG | 0.196587 | 8.1:+23900486 | MS.gene60378:CDS |
CATCAGATATTTACATTATT+GGG | 0.224092 | 8.1:+23899468 | MS.gene60378:CDS |
ACCAGTTAGTTCAATCTTCT+TGG | 0.245932 | 8.1:+23902147 | MS.gene60378:CDS |
GTTTGTTCCCATCTGGCTTC+AGG | 0.254452 | 8.1:+23901141 | MS.gene60378:CDS |
TTTCATTAATGCAGGTGTTT+TGG | 0.294116 | 8.1:+23897458 | MS.gene60378:intron |
CTGGAAATTTGAGTTTGTTA+TGG | 0.317825 | 8.1:+23900217 | MS.gene60378:CDS |
AAAAGTTTACACCAAAGTTC+TGG | 0.327115 | 8.1:+23900198 | MS.gene60378:CDS |
TCAGATACTGCTTCCTTGTA+TGG | 0.343673 | 8.1:+23900165 | MS.gene60378:CDS |
ATAGTAAACCAATCCCAAAA+TGG | 0.344571 | 8.1:+23899842 | MS.gene60378:CDS |
GTGCTTTGTTTGTTCCCATC+TGG | 0.345696 | 8.1:+23901134 | MS.gene60378:CDS |
ATCTTCAAACTATACTTGAT+TGG | 0.364386 | 8.1:+23900073 | MS.gene60378:CDS |
AACTCAAATTTCCAGAACTT+TGG | 0.382670 | 8.1:-23900209 | None:intergenic |
TTATAGCTCGTTGTAACTTC+CGG | 0.404294 | 8.1:-23902192 | None:intergenic |
TTGAATGCTGGAAATGTGTT+TGG | 0.405802 | 8.1:+23899811 | MS.gene60378:CDS |
TAGGAATATATGTGTCTGTT+TGG | 0.412001 | 8.1:+23900418 | MS.gene60378:CDS |
TGTTGGTCTTATGGGCTACA+TGG | 0.414936 | 8.1:+23900494 | MS.gene60378:CDS |
CGCATATTGTGGCTCGGAAA+AGG | 0.416163 | 8.1:+23902073 | MS.gene60378:CDS |
AACACATTTCCAGCATTCAA+TGG | 0.416180 | 8.1:-23899808 | None:intergenic |
ATGTAATGATCTTGAAATTG+AGG | 0.426971 | 8.1:+23899424 | MS.gene60378:CDS |
ACCAAGAAGATTGAACTAAC+TGG | 0.430174 | 8.1:-23902148 | None:intergenic |
GCTAAGCAATGAATTATGTA+AGG | 0.434358 | 8.1:+23901845 | MS.gene60378:intron |
ATTGGTACATGGAATGTTGC+TGG | 0.445478 | 8.1:+23899392 | MS.gene60378:CDS |
GTTAAATTCATACTTGTATG+TGG | 0.447949 | 8.1:-23901913 | None:intergenic |
CTAACAATCCGAACATACTT+AGG | 0.448912 | 8.1:-23900384 | None:intergenic |
CATTTGAAAGTTTCTCAAGT+TGG | 0.449419 | 8.1:+23900471 | MS.gene60378:CDS |
GTTATGGAGCGAAAAGCAAC+AGG | 0.451653 | 8.1:+23900233 | MS.gene60378:CDS |
ATTGGATCTAACCGAAGTTC+AGG | 0.453469 | 8.1:-23900096 | None:intergenic |
CCTTAAAGAGGATGAGGATG+AGG | 0.463702 | 8.1:+23902249 | MS.gene60378:CDS |
TAGTAAACCAATCCCAAAAT+GGG | 0.467774 | 8.1:+23899843 | MS.gene60378:CDS |
AAAGTTTCTCAAGTTGGTGT+TGG | 0.469427 | 8.1:+23900477 | MS.gene60378:CDS |
ATGGTTGAATATAAAGCAAA+AGG | 0.473863 | 8.1:+23897501 | MS.gene60378:CDS |
CATGTCAGATACATCAAGAA+TGG | 0.475267 | 8.1:-23900280 | None:intergenic |
AGCATCATACCTCACTTCCT+TGG | 0.478675 | 8.1:-23899279 | None:intergenic |
AGGAATATATGTGTCTGTTT+GGG | 0.487542 | 8.1:+23900419 | MS.gene60378:CDS |
GTATTTGAGGGATGGAAAGA+GGG | 0.487961 | 8.1:+23901873 | MS.gene60378:CDS |
TGTAAGGGACATGTATTTGA+GGG | 0.489849 | 8.1:+23901861 | MS.gene60378:CDS |
AATGAATCAACATGATGGAT+TGG | 0.491515 | 8.1:-23900114 | None:intergenic |
TCCTCTTTAAGGAAAACATC+AGG | 0.492012 | 8.1:-23902238 | None:intergenic |
TCGGATTGTTAGCAAGCAAA+TGG | 0.495576 | 8.1:+23900395 | MS.gene60378:CDS |
AAGAACTCTAAACAAATCTT+CGG | 0.498609 | 8.1:+23899879 | MS.gene60378:CDS |
CATCCACAGTGATGAAGAAA+TGG | 0.502176 | 8.1:+23897482 | MS.gene60378:CDS |
GAATTATCGTATCAATATGT+CGG | 0.502246 | 8.1:+23901574 | MS.gene60378:CDS |
AATCACATCCTAAGTATGTT+CGG | 0.504427 | 8.1:+23900376 | MS.gene60378:CDS |
TACTTGATTGGCCTGAACTT+CGG | 0.507822 | 8.1:+23900085 | MS.gene60378:CDS |
TCGGAAATGAATCAACATGA+TGG | 0.509500 | 8.1:-23900119 | None:intergenic |
CATGCTTGCACTTACCATGC+TGG | 0.509684 | 8.1:-23901987 | None:intergenic |
CTTTCTGACCTGAAGCCAGA+TGG | 0.516560 | 8.1:-23901149 | None:intergenic |
CGAGCTCATGAAATTCGATC+AGG | 0.518732 | 8.1:+23901637 | MS.gene60378:CDS |
ATGTAAGGGACATGTATTTG+AGG | 0.519189 | 8.1:+23901860 | MS.gene60378:CDS |
GAGTTTCTTCTAATTGGAGA+AGG | 0.522093 | 8.1:-23899937 | None:intergenic |
GAGGTTGTTCCATTGAATGC+TGG | 0.522786 | 8.1:+23899799 | MS.gene60378:CDS |
GGGTACAAAGAAAGCTAAGA+AGG | 0.523270 | 8.1:+23900439 | MS.gene60378:CDS |
TTTCATTTCAAAACCATACA+AGG | 0.524618 | 8.1:-23900178 | None:intergenic |
CTGGCTTCAGGTCAGAAAGA+TGG | 0.528110 | 8.1:+23901153 | MS.gene60378:CDS |
AATTCATACTTGTATGTGGG+TGG | 0.528358 | 8.1:-23901909 | None:intergenic |
TGTATTTGAGGGATGGAAAG+AGG | 0.530931 | 8.1:+23901872 | MS.gene60378:CDS |
TTTCTTCTAATTGGAGAAGG+AGG | 0.531842 | 8.1:-23899934 | None:intergenic |
AGCTAGTAGATCTAAAGAAG+TGG | 0.534737 | 8.1:+23901612 | MS.gene60378:CDS |
TGATAGTGCTTTAGACAAGA+AGG | 0.536398 | 8.1:+23899987 | MS.gene60378:CDS |
AGGGACATGTATTTGAGGGA+TGG | 0.537693 | 8.1:+23901865 | MS.gene60378:CDS |
TCAGGGTAACAATTGGTACA+TGG | 0.538825 | 8.1:+23899381 | MS.gene60378:intron |
CTAAACAAATCTTCGGAACC+CGG | 0.539596 | 8.1:+23899886 | MS.gene60378:CDS |
TTCTTCTAATTGGAGAAGGA+GGG | 0.548470 | 8.1:-23899933 | None:intergenic |
TTTCTGACCTGAAGCCAGAT+GGG | 0.550168 | 8.1:-23901148 | None:intergenic |
TGTAATGATCTTGAAATTGA+GGG | 0.550263 | 8.1:+23899425 | MS.gene60378:CDS |
GCGAATAATGAAGATGCTGA+TGG | 0.554348 | 8.1:+23900339 | MS.gene60378:CDS |
TCTTCTAATTGGAGAAGGAG+GGG | 0.556756 | 8.1:-23899932 | None:intergenic |
CCAATAATGTAAATATCTGA+TGG | 0.559707 | 8.1:-23899467 | None:intergenic |
AACTCTGATAAACATGTGGG+TGG | 0.566295 | 8.1:+23901933 | MS.gene60378:CDS |
CAGCTGGCTTACTCATGTGA+TGG | 0.566924 | 8.1:-23901267 | None:intergenic |
ATTCATACTTGTATGTGGGT+GGG | 0.567042 | 8.1:-23901908 | None:intergenic |
TTAAATTCATACTTGTATGT+GGG | 0.576883 | 8.1:-23901912 | None:intergenic |
ATGTTGAAGTAATTGACCAC+CGG | 0.584197 | 8.1:+23902173 | MS.gene60378:CDS |
TCAATTTCAAGATCATTACA+TGG | 0.587609 | 8.1:-23899422 | None:intergenic |
GTTGGTCTTATGGGCTACAT+GGG | 0.592920 | 8.1:+23900495 | MS.gene60378:CDS |
TATTTGAGGGATGGAAAGAG+GGG | 0.593853 | 8.1:+23901874 | MS.gene60378:CDS |
ATGATCTTGAAATTGAGGGT+TGG | 0.596603 | 8.1:+23899429 | MS.gene60378:CDS |
ATTGTTAGCAAGCAAATGGT+AGG | 0.604748 | 8.1:+23900399 | MS.gene60378:CDS |
TGTGATCGCATATTGTGGCT+CGG | 0.606123 | 8.1:+23902067 | MS.gene60378:CDS |
TATGGGCTACATGGGAAACA+AGG | 0.609052 | 8.1:+23900503 | MS.gene60378:CDS |
TATCGTATCAATATGTCGGA+TGG | 0.612550 | 8.1:+23901578 | MS.gene60378:CDS |
CTAAGCAATGAATTATGTAA+GGG | 0.616973 | 8.1:+23901846 | MS.gene60378:CDS |
AGAATGGAATCAAATACTTG+AGG | 0.627969 | 8.1:-23900264 | None:intergenic |
TGGAAATGTGTTTGGAGCTG+AGG | 0.630627 | 8.1:+23899819 | MS.gene60378:CDS |
GCAGGTGTGATCGCATATTG+TGG | 0.639378 | 8.1:+23902062 | MS.gene60378:intron |
ACATAAATACCAAGGAAGTG+AGG | 0.640425 | 8.1:+23899270 | MS.gene60378:CDS |
ACTCTGATAAACATGTGGGT+GGG | 0.641286 | 8.1:+23901934 | MS.gene60378:CDS |
GAAGATGCTGATGGAATGAT+CGG | 0.643450 | 8.1:+23900348 | MS.gene60378:CDS |
ACTGATGAGAGTGAAGATGA+TGG | 0.645910 | 8.1:+23897559 | MS.gene60378:CDS |
TAGCTCGTTGTAACTTCCGG+TGG | 0.652172 | 8.1:-23902189 | None:intergenic |
ATTTAACTCTGATAAACATG+TGG | 0.652790 | 8.1:+23901929 | MS.gene60378:CDS |
AGCACAATGAAAACAATGAG+GGG | 0.654951 | 8.1:+23897342 | None:intergenic |
ATACAAGGAAGCAGTATCTG+AGG | 0.660386 | 8.1:-23900163 | None:intergenic |
TGCTCAATACATAAATACCA+AGG | 0.661086 | 8.1:+23899262 | MS.gene60378:CDS |
GTGGGTGGGAATACACAAGA+AGG | 0.673551 | 8.1:+23901948 | MS.gene60378:CDS |
CAACCATTTCTTCATCACTG+TGG | 0.674705 | 8.1:-23897485 | None:intergenic |
TTTAACTCTGATAAACATGT+GGG | 0.674897 | 8.1:+23901930 | MS.gene60378:CDS |
AATGAGGGGAAAACGCTCAG+AGG | 0.681871 | 8.1:+23897356 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATTAGATATATCATATT+TGG | - | chr8.1:23901687-23901706 | None:intergenic | 10.0% |
!! | TGTTAAATTCAATATAAAAA+AGG | - | chr8.1:23900539-23900558 | None:intergenic | 10.0% |
!! | TTAATGAAATTAATTGTAAT+TGG | + | chr8.1:23899351-23899370 | MS.gene60378:intron | 10.0% |
!!! | TTTTATATAGAACAAAATTA+AGG | + | chr8.1:23900664-23900683 | MS.gene60378:intron | 10.0% |
!! | AAATTATATGAACAACTAAA+AGG | - | chr8.1:23897624-23897643 | None:intergenic | 15.0% |
!! | AAATTGTTAGTATTATATTG+AGG | + | chr8.1:23897796-23897815 | MS.gene60378:intron | 15.0% |
!! | AATTGTTAGTATTATATTGA+GGG | + | chr8.1:23897797-23897816 | MS.gene60378:intron | 15.0% |
!! | ATTAATGAAACCAAATTATA+AGG | - | chr8.1:23897448-23897467 | None:intergenic | 15.0% |
!! | ATTAATTTCATATACTTTCT+CGG | - | chr8.1:23899091-23899110 | None:intergenic | 15.0% |
!! | CATTAATATCTTTATAGTTA+AGG | - | chr8.1:23899337-23899356 | None:intergenic | 15.0% |
!! | CTTATTTATTCATCTTAAAA+AGG | + | chr8.1:23898122-23898141 | MS.gene60378:intron | 15.0% |
!!! | CTTTTTAAGATGAATAAATA+AGG | - | chr8.1:23898124-23898143 | None:intergenic | 15.0% |
!!! | TATTTTGGATGTTTTTTAAT+TGG | + | chr8.1:23898535-23898554 | MS.gene60378:intron | 15.0% |
!! | AAAAATTGAACTTGAAATGT+AGG | - | chr8.1:23899731-23899750 | None:intergenic | 20.0% |
!! | AAAATTGAACTTGAAATGTA+GGG | - | chr8.1:23899730-23899749 | None:intergenic | 20.0% |
!! | AATTTCTATTCTATTCTATG+AGG | + | chr8.1:23897400-23897419 | MS.gene60378:intron | 20.0% |
!! | ATTACATAAATATGTGTATG+CGG | - | chr8.1:23898393-23898412 | None:intergenic | 20.0% |
!! | CATCAGATATTTACATTATT+GGG | + | chr8.1:23899468-23899487 | MS.gene60378:CDS | 20.0% |
!! | TACAGATGATAAGTAATTAA+AGG | + | chr8.1:23901365-23901384 | MS.gene60378:intron | 20.0% |
!! | TCAAATTATCCTTATTAGAA+TGG | + | chr8.1:23898903-23898922 | MS.gene60378:intron | 20.0% |
!! | TTAAATTCATACTTGTATGT+GGG | - | chr8.1:23901915-23901934 | None:intergenic | 20.0% |
!! | TTAACATTTGAATCTAAGTT+TGG | - | chr8.1:23901765-23901784 | None:intergenic | 20.0% |
!! | TTTGTTGAAACCTTATAATT+TGG | + | chr8.1:23897435-23897454 | MS.gene60378:intron | 20.0% |
!!! | ATTAAGCAGTTTTTAGATTT+AGG | - | chr8.1:23898477-23898496 | None:intergenic | 20.0% |
!!! | ATTGTAATTGGATAATTTTC+AGG | + | chr8.1:23899363-23899382 | MS.gene60378:intron | 20.0% |
!!! | GGGTATTTTTTTATAAACAT+GGG | + | chr8.1:23898727-23898746 | MS.gene60378:intron | 20.0% |
!!! | TATTTTGTTCAATTCTCTTT+CGG | - | chr8.1:23900718-23900737 | None:intergenic | 20.0% |
!!! | TCTTTTCATAGTTAAAATGT+GGG | + | chr8.1:23898648-23898667 | MS.gene60378:intron | 20.0% |
!!! | TGGGTATTTTTTTATAAACA+TGG | + | chr8.1:23898726-23898745 | MS.gene60378:intron | 20.0% |
!!! | TTGTAATTGGATAATTTTCA+GGG | + | chr8.1:23899364-23899383 | MS.gene60378:intron | 20.0% |
!!! | TTTTTTATAAACATGGGTAT+GGG | + | chr8.1:23898733-23898752 | MS.gene60378:intron | 20.0% |
!!! | TTTTTTTATAAACATGGGTA+TGG | + | chr8.1:23898732-23898751 | MS.gene60378:intron | 20.0% |
! | AAAGAAGAGTTTCTTCTAAT+TGG | - | chr8.1:23899946-23899965 | None:intergenic | 25.0% |
! | AACAAAATATTACTGATGCA+GGG | + | chr8.1:23901072-23901091 | MS.gene60378:intron | 25.0% |
! | AAGAACTCTAAACAAATCTT+CGG | + | chr8.1:23899879-23899898 | MS.gene60378:CDS | 25.0% |
! | AATTACCCACAAATTTAAGT+GGG | + | chr8.1:23898325-23898344 | MS.gene60378:intron | 25.0% |
! | AATTATCCTTATTAGAATGG+TGG | + | chr8.1:23898906-23898925 | MS.gene60378:intron | 25.0% |
! | ATAGTTAAAATGTGGGTAAT+GGG | + | chr8.1:23898655-23898674 | MS.gene60378:intron | 25.0% |
! | ATATGAACAACTAAAAGGAA+AGG | - | chr8.1:23897619-23897638 | None:intergenic | 25.0% |
! | ATCTTATAGATGATAGATCT+CGG | + | chr8.1:23900844-23900863 | MS.gene60378:intron | 25.0% |
! | ATCTTCAAACTATACTTGAT+TGG | + | chr8.1:23900073-23900092 | MS.gene60378:CDS | 25.0% |
! | ATGATCAAATAGACATTCTA+AGG | - | chr8.1:23898802-23898821 | None:intergenic | 25.0% |
! | ATGGTTGAATATAAAGCAAA+AGG | + | chr8.1:23897501-23897520 | MS.gene60378:CDS | 25.0% |
! | ATGTAATGATCTTGAAATTG+AGG | + | chr8.1:23899424-23899443 | MS.gene60378:CDS | 25.0% |
! | ATTGATGAGATATGAATAGA+AGG | + | chr8.1:23897675-23897694 | MS.gene60378:intron | 25.0% |
! | ATTTAACTCTGATAAACATG+TGG | + | chr8.1:23901929-23901948 | MS.gene60378:CDS | 25.0% |
! | CCAATAATGTAAATATCTGA+TGG | - | chr8.1:23899470-23899489 | None:intergenic | 25.0% |
! | CCATCAGATATTTACATTAT+TGG | + | chr8.1:23899467-23899486 | MS.gene60378:CDS | 25.0% |
! | CTAAGCAATGAATTATGTAA+GGG | + | chr8.1:23901846-23901865 | MS.gene60378:CDS | 25.0% |
! | GAAAGAGAATTGAACAAAAT+AGG | + | chr8.1:23900717-23900736 | MS.gene60378:intron | 25.0% |
! | GAATTATCGTATCAATATGT+CGG | + | chr8.1:23901574-23901593 | MS.gene60378:CDS | 25.0% |
! | GAGATTGAATTCATTCATTA+TGG | - | chr8.1:23901421-23901440 | None:intergenic | 25.0% |
! | GTGTATATTTAATGTCTTCA+AGG | + | chr8.1:23900577-23900596 | MS.gene60378:intron | 25.0% |
! | GTTAAATTCATACTTGTATG+TGG | - | chr8.1:23901916-23901935 | None:intergenic | 25.0% |
! | TAACAAAATATTACTGATGC+AGG | + | chr8.1:23901071-23901090 | MS.gene60378:intron | 25.0% |
! | TAATGTCTTCAAGGATATTA+AGG | + | chr8.1:23900586-23900605 | MS.gene60378:intron | 25.0% |
! | TAATTACCCACAAATTTAAG+TGG | + | chr8.1:23898324-23898343 | MS.gene60378:intron | 25.0% |
! | TCAATTTCAAGATCATTACA+TGG | - | chr8.1:23899425-23899444 | None:intergenic | 25.0% |
! | TCATAAAATAGTAAGAATCG+TGG | - | chr8.1:23898568-23898587 | None:intergenic | 25.0% |
! | TGTAATGATCTTGAAATTGA+GGG | + | chr8.1:23899425-23899444 | MS.gene60378:CDS | 25.0% |
! | TTACATAAATATGTGTATGC+GGG | - | chr8.1:23898392-23898411 | None:intergenic | 25.0% |
! | TTTAACTCTGATAAACATGT+GGG | + | chr8.1:23901930-23901949 | MS.gene60378:CDS | 25.0% |
! | TTTCATTTCAAAACCATACA+AGG | - | chr8.1:23900181-23900200 | None:intergenic | 25.0% |
!! | AAGGTACCATAAAATGTTTA+GGG | + | chr8.1:23900790-23900809 | MS.gene60378:intron | 25.0% |
!! | ATCATTGTGAATGAAGATTT+TGG | + | chr8.1:23901497-23901516 | MS.gene60378:intron | 25.0% |
!! | GATATATCTAATTTTCATCG+AGG | + | chr8.1:23901692-23901711 | MS.gene60378:intron | 25.0% |
!! | GTCTTTTCATAGTTAAAATG+TGG | + | chr8.1:23898647-23898666 | MS.gene60378:intron | 25.0% |
!! | TAATTTGGTTTCATTAATGC+AGG | + | chr8.1:23897450-23897469 | MS.gene60378:intron | 25.0% |
!! | TTCAATATAAAAAAGGTGCA+AGG | - | chr8.1:23900532-23900551 | None:intergenic | 25.0% |
!! | TTTTGTTACCACATATATGA+AGG | - | chr8.1:23901059-23901078 | None:intergenic | 25.0% |
!!! | AAAGGTACCATAAAATGTTT+AGG | + | chr8.1:23900789-23900808 | MS.gene60378:intron | 25.0% |
!!! | ACAGTTTTTTAGGGATATTT+TGG | + | chr8.1:23898520-23898539 | MS.gene60378:intron | 25.0% |
!!! | ATAAGTTTTAACAAACCTTG+AGG | + | chr8.1:23900620-23900639 | MS.gene60378:intron | 25.0% |
!!! | ATAATTTTCAGGGTAACAAT+TGG | + | chr8.1:23899374-23899393 | MS.gene60378:intron | 25.0% |
!!! | ATTGAAAGTGACTTGTTTTT+TGG | - | chr8.1:23898177-23898196 | None:intergenic | 25.0% |
!!! | CATTTTAACCTTCATATATG+TGG | + | chr8.1:23901048-23901067 | MS.gene60378:intron | 25.0% |
AAAAAATATCCTCATTGGGT+AGG | + | chr8.1:23898274-23898293 | MS.gene60378:intron | 30.0% | |
AAAAAGCCACCATTCTAATA+AGG | - | chr8.1:23898915-23898934 | None:intergenic | 30.0% | |
AAAAATATCCTCATTGGGTA+GGG | + | chr8.1:23898275-23898294 | MS.gene60378:intron | 30.0% | |
AAAAGTTTACACCAAAGTTC+TGG | + | chr8.1:23900198-23900217 | MS.gene60378:CDS | 30.0% | |
AACTCAAATTTCCAGAACTT+TGG | - | chr8.1:23900212-23900231 | None:intergenic | 30.0% | |
AATCACATCCTAAGTATGTT+CGG | + | chr8.1:23900376-23900395 | MS.gene60378:CDS | 30.0% | |
AATTATGCGTAAGATTATGC+AGG | + | chr8.1:23902044-23902063 | MS.gene60378:intron | 30.0% | |
ACAAAATATTACTGATGCAG+GGG | + | chr8.1:23901073-23901092 | MS.gene60378:intron | 30.0% | |
AGAATGGAATCAAATACTTG+AGG | - | chr8.1:23900267-23900286 | None:intergenic | 30.0% | |
AGACAATGCATAATATATGC+GGG | + | chr8.1:23898074-23898093 | MS.gene60378:intron | 30.0% | |
AGATGAATAAATAAGGTGTG+TGG | - | chr8.1:23898117-23898136 | None:intergenic | 30.0% | |
AGATTGATATACACTATCGA+TGG | - | chr8.1:23900960-23900979 | None:intergenic | 30.0% | |
AGGAATATATGTGTCTGTTT+GGG | + | chr8.1:23900419-23900438 | MS.gene60378:CDS | 30.0% | |
ATACACAAGAAGGTGAAAAA+AGG | + | chr8.1:23901958-23901977 | MS.gene60378:CDS | 30.0% | |
ATAGTAAACCAATCCCAAAA+TGG | + | chr8.1:23899842-23899861 | MS.gene60378:CDS | 30.0% | |
ATATGAATAGAAGGAAAGAG+AGG | + | chr8.1:23897684-23897703 | MS.gene60378:intron | 30.0% | |
ATGAATAAATAAGGTGTGTG+GGG | - | chr8.1:23898115-23898134 | None:intergenic | 30.0% | |
ATTATCCTTGACAATCATCT+TGG | + | chr8.1:23901308-23901327 | MS.gene60378:intron | 30.0% | |
CATAGTTAAAATGTGGGTAA+TGG | + | chr8.1:23898654-23898673 | MS.gene60378:intron | 30.0% | |
CATGACATGAAAGCTTATAA+AGG | - | chr8.1:23897882-23897901 | None:intergenic | 30.0% | |
CATTTGAAAGTTTCTCAAGT+TGG | + | chr8.1:23900471-23900490 | MS.gene60378:CDS | 30.0% | |
CCGTAAAAAATATCCTCATT+GGG | + | chr8.1:23898270-23898289 | MS.gene60378:intron | 30.0% | |
GAGACAATGCATAATATATG+CGG | + | chr8.1:23898073-23898092 | MS.gene60378:intron | 30.0% | |
GATGAATAAATAAGGTGTGT+GGG | - | chr8.1:23898116-23898135 | None:intergenic | 30.0% | |
GCTAAGCAATGAATTATGTA+AGG | + | chr8.1:23901845-23901864 | MS.gene60378:intron | 30.0% | |
TAAATTTGTGGGTAATTACC+CGG | - | chr8.1:23898322-23898341 | None:intergenic | 30.0% | |
TAGGAATATATGTGTCTGTT+TGG | + | chr8.1:23900418-23900437 | MS.gene60378:CDS | 30.0% | |
TAGTAAACCAATCCCAAAAT+GGG | + | chr8.1:23899843-23899862 | MS.gene60378:CDS | 30.0% | |
TAGTCTTCCAAAATTGACAT+GGG | + | chr8.1:23899006-23899025 | MS.gene60378:intron | 30.0% | |
TGCTCAATACATAAATACCA+AGG | + | chr8.1:23899262-23899281 | MS.gene60378:CDS | 30.0% | |
TTCACATCAAATGGTAACAA+AGG | + | chr8.1:23900771-23900790 | MS.gene60378:intron | 30.0% | |
! | AACATCTCATTTCTTTTCCA+AGG | - | chr8.1:23898955-23898974 | None:intergenic | 30.0% |
! | AAGAGGGAGTATAAAATAGT+TGG | - | chr8.1:23897988-23898007 | None:intergenic | 30.0% |
! | AGAGGGAGTATAAAATAGTT+GGG | - | chr8.1:23897987-23898006 | None:intergenic | 30.0% |
! | CAAGTACCCTAAACATTTTA+TGG | - | chr8.1:23900799-23900818 | None:intergenic | 30.0% |
! | GCACTATAGCTTTTCTTTTT+AGG | - | chr8.1:23899913-23899932 | None:intergenic | 30.0% |
! | TAATGATTGCATCCCATTTT+GGG | - | chr8.1:23899858-23899877 | None:intergenic | 30.0% |
! | TCAAATAGACATTCTAAGGA+TGG | - | chr8.1:23898798-23898817 | None:intergenic | 30.0% |
! | TTAGTCTTCCAAAATTGACA+TGG | + | chr8.1:23899005-23899024 | MS.gene60378:intron | 30.0% |
! | TTGCTAACAGTCAAATTTTC+TGG | + | chr8.1:23901540-23901559 | MS.gene60378:intron | 30.0% |
! | TTTCATTAATGCAGGTGTTT+TGG | + | chr8.1:23897458-23897477 | MS.gene60378:intron | 30.0% |
! | TTTCGGTTTCATCCATTTTA+TGG | - | chr8.1:23900701-23900720 | None:intergenic | 30.0% |
!! | AATGAATCAACATGATGGAT+TGG | - | chr8.1:23900117-23900136 | None:intergenic | 30.0% |
!! | CTGGAAATTTGAGTTTGTTA+TGG | + | chr8.1:23900217-23900236 | MS.gene60378:CDS | 30.0% |
!! | GTCATGTTGATTCCATAAAA+TGG | + | chr8.1:23900686-23900705 | MS.gene60378:intron | 30.0% |
!!! | AACAGTCAAATTTTCTGGTT+CGG | + | chr8.1:23901545-23901564 | MS.gene60378:intron | 30.0% |
!!! | ACAATTGCTTTTTTCTGTTC+TGG | - | chr8.1:23897757-23897776 | None:intergenic | 30.0% |
!!! | ATAGCTTTTCTTTTTAGGTC+CGG | - | chr8.1:23899908-23899927 | None:intergenic | 30.0% |
!!! | CCAATGAGGATATTTTTTAC+GGG | - | chr8.1:23898272-23898291 | None:intergenic | 30.0% |
!!! | CCCAATGAGGATATTTTTTA+CGG | - | chr8.1:23898273-23898292 | None:intergenic | 30.0% |
AAAACATAGCACAATCCTCA+AGG | - | chr8.1:23900638-23900657 | None:intergenic | 35.0% | |
AACACATTTCCAGCATTCAA+TGG | - | chr8.1:23899811-23899830 | None:intergenic | 35.0% | |
AATTCATACTTGTATGTGGG+TGG | - | chr8.1:23901912-23901931 | None:intergenic | 35.0% | |
AATTTACAAGTGTGACGAAG+AGG | - | chr8.1:23898005-23898024 | None:intergenic | 35.0% | |
ACAACCTCTTGAAAACTGAT+AGG | - | chr8.1:23899787-23899806 | None:intergenic | 35.0% | |
ACAACTAGAGAGCAATATGA+TGG | - | chr8.1:23897648-23897667 | None:intergenic | 35.0% | |
ACATAAATACCAAGGAAGTG+AGG | + | chr8.1:23899270-23899289 | MS.gene60378:CDS | 35.0% | |
ACCAAGAAGATTGAACTAAC+TGG | - | chr8.1:23902151-23902170 | None:intergenic | 35.0% | |
ACCAGTTAGTTCAATCTTCT+TGG | + | chr8.1:23902147-23902166 | MS.gene60378:CDS | 35.0% | |
AGCTAGTAGATCTAAAGAAG+TGG | + | chr8.1:23901612-23901631 | MS.gene60378:CDS | 35.0% | |
ATCCCTAAAAAACTGTACAC+AGG | - | chr8.1:23898516-23898535 | None:intergenic | 35.0% | |
ATGAAGCTGAAATTGTTCCT+TGG | + | chr8.1:23898935-23898954 | MS.gene60378:intron | 35.0% | |
ATGATCTTGAAATTGAGGGT+TGG | + | chr8.1:23899429-23899448 | MS.gene60378:CDS | 35.0% | |
ATGTAAGGGACATGTATTTG+AGG | + | chr8.1:23901860-23901879 | MS.gene60378:CDS | 35.0% | |
ATGTTGAAGTAATTGACCAC+CGG | + | chr8.1:23902173-23902192 | MS.gene60378:CDS | 35.0% | |
ATTCATACTTGTATGTGGGT+GGG | - | chr8.1:23901911-23901930 | None:intergenic | 35.0% | |
ATTGTTAGCAAGCAAATGGT+AGG | + | chr8.1:23900399-23900418 | MS.gene60378:CDS | 35.0% | |
ATTTACAAGTGTGACGAAGA+GGG | - | chr8.1:23898004-23898023 | None:intergenic | 35.0% | |
CAGGTGAGAAATATGAAACT+TGG | + | chr8.1:23901656-23901675 | MS.gene60378:intron | 35.0% | |
CATGTCAGATACATCAAGAA+TGG | - | chr8.1:23900283-23900302 | None:intergenic | 35.0% | |
CCATACCCACTTAAATTTGT+GGG | - | chr8.1:23898333-23898352 | None:intergenic | 35.0% | |
CCATTTGATGTGAAACTCAT+AGG | - | chr8.1:23900765-23900784 | None:intergenic | 35.0% | |
CCCGTAAAAAATATCCTCAT+TGG | + | chr8.1:23898269-23898288 | MS.gene60378:intron | 35.0% | |
CCTATGAGTTTCACATCAAA+TGG | + | chr8.1:23900762-23900781 | MS.gene60378:intron | 35.0% | |
CTAAAAAACTGTACACAGGA+GGG | - | chr8.1:23898512-23898531 | None:intergenic | 35.0% | |
CTAACAATCCGAACATACTT+AGG | - | chr8.1:23900387-23900406 | None:intergenic | 35.0% | |
GAAGCAATTAGAAATTCTCG+AGG | - | chr8.1:23901813-23901832 | None:intergenic | 35.0% | |
GACAATGCATAATATATGCG+GGG | + | chr8.1:23898075-23898094 | MS.gene60378:intron | 35.0% | |
GAGTATGACACTAAAGTTGT+TGG | + | chr8.1:23898681-23898700 | MS.gene60378:intron | 35.0% | |
GAGTTTCTTCTAATTGGAGA+AGG | - | chr8.1:23899940-23899959 | None:intergenic | 35.0% | |
GATTAACTGTTATCGTGATG+AGG | + | chr8.1:23899134-23899153 | MS.gene60378:intron | 35.0% | |
GTAAAGTAAACCAAAACAGC+TGG | - | chr8.1:23901286-23901305 | None:intergenic | 35.0% | |
GTTTATGATATCAGCGATGT+GGG | - | chr8.1:23899508-23899527 | None:intergenic | 35.0% | |
TATAAAATAGTTGGGAGGAG+TGG | - | chr8.1:23897979-23897998 | None:intergenic | 35.0% | |
TATCGTATCAATATGTCGGA+TGG | + | chr8.1:23901578-23901597 | MS.gene60378:CDS | 35.0% | |
TCAAGGATATTAAGGTAGCT+TGG | + | chr8.1:23900594-23900613 | MS.gene60378:intron | 35.0% | |
TCATATTGCTCTCTAGTTGT+TGG | + | chr8.1:23897648-23897667 | MS.gene60378:intron | 35.0% | |
TCCATACCCACTTAAATTTG+TGG | - | chr8.1:23898334-23898353 | None:intergenic | 35.0% | |
TCGGAAATGAATCAACATGA+TGG | - | chr8.1:23900122-23900141 | None:intergenic | 35.0% | |
TGAGGACTTGTCATATCAAT+AGG | + | chr8.1:23902267-23902286 | MS.gene60378:CDS | 35.0% | |
TGTAAGGGACATGTATTTGA+GGG | + | chr8.1:23901861-23901880 | MS.gene60378:CDS | 35.0% | |
TGTTTATGATATCAGCGATG+TGG | - | chr8.1:23899509-23899528 | None:intergenic | 35.0% | |
TTAGAAATTCTCGAGGATCA+TGG | - | chr8.1:23901806-23901825 | None:intergenic | 35.0% | |
TTATAAACATGGGTATGGGA+AGG | + | chr8.1:23898737-23898756 | MS.gene60378:intron | 35.0% | |
TTATAGCTCGTTGTAACTTC+CGG | - | chr8.1:23902195-23902214 | None:intergenic | 35.0% | |
TTCTTCTAATTGGAGAAGGA+GGG | - | chr8.1:23899936-23899955 | None:intergenic | 35.0% | |
TTGAATGCTGGAAATGTGTT+TGG | + | chr8.1:23899811-23899830 | MS.gene60378:CDS | 35.0% | |
TTTCTTCTAATTGGAGAAGG+AGG | - | chr8.1:23899937-23899956 | None:intergenic | 35.0% | |
! | ACTTTGGAAACTCTAGACTT+AGG | - | chr8.1:23901718-23901737 | None:intergenic | 35.0% |
! | CTAATGATTGCATCCCATTT+TGG | - | chr8.1:23899859-23899878 | None:intergenic | 35.0% |
! | CTTAAAACGAGTGTCGTATA+GGG | + | chr8.1:23898217-23898236 | MS.gene60378:intron | 35.0% |
! | TAAGTCTAGAGTTTCCAAAG+TGG | + | chr8.1:23901717-23901736 | MS.gene60378:intron | 35.0% |
! | TCCTCTTTAAGGAAAACATC+AGG | - | chr8.1:23902241-23902260 | None:intergenic | 35.0% |
! | TCCTGATGTTTTCCTTAAAG+AGG | + | chr8.1:23902237-23902256 | MS.gene60378:CDS | 35.0% |
! | TCTTAAAACGAGTGTCGTAT+AGG | + | chr8.1:23898216-23898235 | MS.gene60378:intron | 35.0% |
! | TGATAGTGCTTTAGACAAGA+AGG | + | chr8.1:23899987-23900006 | MS.gene60378:CDS | 35.0% |
! | TGTTTTCCTTAAAGAGGATG+AGG | + | chr8.1:23902243-23902262 | MS.gene60378:CDS | 35.0% |
! | TTTGGAGTCTAGTAAACTAG+TGG | - | chr8.1:23898159-23898178 | None:intergenic | 35.0% |
!! | AAAGTTTCTCAAGTTGGTGT+TGG | + | chr8.1:23900477-23900496 | MS.gene60378:CDS | 35.0% |
!! | TCATGTGATGGAATTTTCTG+TGG | - | chr8.1:23901258-23901277 | None:intergenic | 35.0% |
!! | TGTTCCTATCAGTTTTCAAG+AGG | + | chr8.1:23899780-23899799 | MS.gene60378:intron | 35.0% |
!! | TTCAAAGCATTGACATAGTC+TGG | - | chr8.1:23897948-23897967 | None:intergenic | 35.0% |
!!! | ACAGTCAAATTTTCTGGTTC+GGG | + | chr8.1:23901546-23901565 | MS.gene60378:intron | 35.0% |
!!! | ATACGACACTCGTTTTAAGA+CGG | - | chr8.1:23898216-23898235 | None:intergenic | 35.0% |
!!! | CTCCTGTGTACAGTTTTTTA+GGG | + | chr8.1:23898511-23898530 | MS.gene60378:intron | 35.0% |
!!! | TAGCTTTTCTTTTTAGGTCC+GGG | - | chr8.1:23899907-23899926 | None:intergenic | 35.0% |
!!! | TATTTTTTACGGGTGTCCAT+CGG | - | chr8.1:23898262-23898281 | None:intergenic | 35.0% |
AACTCTGATAAACATGTGGG+TGG | + | chr8.1:23901933-23901952 | MS.gene60378:CDS | 40.0% | |
AAGCTCCAAGATGATTGTCA+AGG | - | chr8.1:23901316-23901335 | None:intergenic | 40.0% | |
ACTCTGATAAACATGTGGGT+GGG | + | chr8.1:23901934-23901953 | MS.gene60378:CDS | 40.0% | |
ACTGATGAGAGTGAAGATGA+TGG | + | chr8.1:23897559-23897578 | MS.gene60378:CDS | 40.0% | |
ATAATATATGCGGGGAGTCA+GGG | + | chr8.1:23898083-23898102 | MS.gene60378:intron | 40.0% | |
ATACAAGGAAGCAGTATCTG+AGG | - | chr8.1:23900166-23900185 | None:intergenic | 40.0% | |
ATTGGATCTAACCGAAGTTC+AGG | - | chr8.1:23900099-23900118 | None:intergenic | 40.0% | |
ATTGGTACATGGAATGTTGC+TGG | + | chr8.1:23899392-23899411 | MS.gene60378:CDS | 40.0% | |
CAACCATTTCTTCATCACTG+TGG | - | chr8.1:23897488-23897507 | None:intergenic | 40.0% | |
CACTATAGTACCTTACCGAT+AGG | + | chr8.1:23898762-23898781 | MS.gene60378:intron | 40.0% | |
CATCCACAGTGATGAAGAAA+TGG | + | chr8.1:23897482-23897501 | MS.gene60378:CDS | 40.0% | |
CCCACAAATTTAAGTGGGTA+TGG | + | chr8.1:23898330-23898349 | MS.gene60378:intron | 40.0% | |
CCTAAAAAACTGTACACAGG+AGG | - | chr8.1:23898513-23898532 | None:intergenic | 40.0% | |
CCTTCTCTGTAAACTAAACC+AGG | - | chr8.1:23897836-23897855 | None:intergenic | 40.0% | |
CTAAACAAATCTTCGGAACC+CGG | + | chr8.1:23899886-23899905 | MS.gene60378:CDS | 40.0% | |
GAAGATGCTGATGGAATGAT+CGG | + | chr8.1:23900348-23900367 | MS.gene60378:CDS | 40.0% | |
GATGATAGATCTCGGTCATT+AGG | + | chr8.1:23900852-23900871 | MS.gene60378:intron | 40.0% | |
GCGAATAATGAAGATGCTGA+TGG | + | chr8.1:23900339-23900358 | MS.gene60378:CDS | 40.0% | |
GGGTACAAAGAAAGCTAAGA+AGG | + | chr8.1:23900439-23900458 | MS.gene60378:CDS | 40.0% | |
GTATTTGAGGGATGGAAAGA+GGG | + | chr8.1:23901873-23901892 | MS.gene60378:CDS | 40.0% | |
GTCGTATAGGGATGGTAATT+GGG | + | chr8.1:23898229-23898248 | MS.gene60378:intron | 40.0% | |
TATTTGAGGGATGGAAAGAG+GGG | + | chr8.1:23901874-23901893 | MS.gene60378:CDS | 40.0% | |
TCAGATACTGCTTCCTTGTA+TGG | + | chr8.1:23900165-23900184 | MS.gene60378:CDS | 40.0% | |
TCAGGGTAACAATTGGTACA+TGG | + | chr8.1:23899381-23899400 | MS.gene60378:intron | 40.0% | |
TCGGATTGTTAGCAAGCAAA+TGG | + | chr8.1:23900395-23900414 | MS.gene60378:CDS | 40.0% | |
TCTTCTAATTGGAGAAGGAG+GGG | - | chr8.1:23899935-23899954 | None:intergenic | 40.0% | |
TGTATTTGAGGGATGGAAAG+AGG | + | chr8.1:23901872-23901891 | MS.gene60378:CDS | 40.0% | |
TGTCGTATAGGGATGGTAAT+TGG | + | chr8.1:23898228-23898247 | MS.gene60378:intron | 40.0% | |
! | AAATATGTGTATGCGGGTTG+CGG | - | chr8.1:23898386-23898405 | None:intergenic | 40.0% |
! | AGACATTCTAAGGATGGCAA+TGG | - | chr8.1:23898792-23898811 | None:intergenic | 40.0% |
! | CCTGGTTTAGTTTACAGAGA+AGG | + | chr8.1:23897833-23897852 | MS.gene60378:intron | 40.0% |
! | CGTTTCACCCATGTCAATTT+TGG | - | chr8.1:23899016-23899035 | None:intergenic | 40.0% |
! | CTTTGTACTCTGCGCATTTT+CGG | - | chr8.1:23900141-23900160 | None:intergenic | 40.0% |
! | GACATTCTAAGGATGGCAAT+GGG | - | chr8.1:23898791-23898810 | None:intergenic | 40.0% |
! | GCCTTTGAGAATTTCTGGAA+GGG | + | chr8.1:23899687-23899706 | MS.gene60378:intron | 40.0% |
! | GGGAGTATAAAATAGTTGGG+AGG | - | chr8.1:23897984-23898003 | None:intergenic | 40.0% |
!! | AATAGAAGCATCTTTGCGCT+TGG | + | chr8.1:23899569-23899588 | MS.gene60378:intron | 40.0% |
!! | ATAGAAGCATCTTTGCGCTT+GGG | + | chr8.1:23899570-23899589 | MS.gene60378:intron | 40.0% |
!! | CAAGTTGGTGTTGGTCTTAT+GGG | + | chr8.1:23900486-23900505 | MS.gene60378:CDS | 40.0% |
!! | TACTTGATTGGCCTGAACTT+CGG | + | chr8.1:23900085-23900104 | MS.gene60378:CDS | 40.0% |
!! | TCAAGTTGGTGTTGGTCTTA+TGG | + | chr8.1:23900485-23900504 | MS.gene60378:CDS | 40.0% |
!! | TGGTTTGGTGGTGTTAGTTT+AGG | - | chr8.1:23899055-23899074 | None:intergenic | 40.0% |
!!! | ATTGCATCCCATTTTGGGAT+TGG | - | chr8.1:23899853-23899872 | None:intergenic | 40.0% |
!!! | CAGTCAAATTTTCTGGTTCG+GGG | + | chr8.1:23901547-23901566 | MS.gene60378:intron | 40.0% |
!!! | CCTCCTGTGTACAGTTTTTT+AGG | + | chr8.1:23898510-23898529 | MS.gene60378:intron | 40.0% |
AAAAAAGGAGAGCTCCAGCA+TGG | + | chr8.1:23901973-23901992 | MS.gene60378:CDS | 45.0% | |
AAACCCTGCTTTCATGGATC+CGG | + | chr8.1:23898300-23898319 | MS.gene60378:intron | 45.0% | |
AAACTGTACACAGGAGGGAA+CGG | - | chr8.1:23898507-23898526 | None:intergenic | 45.0% | |
AATGTAGGGCTTTACCCCAA+AGG | - | chr8.1:23899716-23899735 | None:intergenic | 45.0% | |
AGCATCATACCTCACTTCCT+TGG | - | chr8.1:23899282-23899301 | None:intergenic | 45.0% | |
AGGATAAACCAAGGCCTAAG+AGG | - | chr8.1:23899665-23899684 | None:intergenic | 45.0% | |
AGGGACATGTATTTGAGGGA+TGG | + | chr8.1:23901865-23901884 | MS.gene60378:CDS | 45.0% | |
AGGGTAAAACCCTGCTTTCA+TGG | + | chr8.1:23898294-23898313 | MS.gene60378:intron | 45.0% | |
ATAAACCAAGGCCTAAGAGG+GGG | - | chr8.1:23899662-23899681 | None:intergenic | 45.0% | |
CAAAGGCCAAGGATAAACCA+AGG | - | chr8.1:23899674-23899693 | None:intergenic | 45.0% | |
CAATGGGTATCCTATCGGTA+AGG | - | chr8.1:23898775-23898794 | None:intergenic | 45.0% | |
CATAATATATGCGGGGAGTC+AGG | + | chr8.1:23898082-23898101 | MS.gene60378:intron | 45.0% | |
CCAGAAATTCTCAAAGGCCA+AGG | - | chr8.1:23899685-23899704 | None:intergenic | 45.0% | |
CCTCATCCTCATCCTCTTTA+AGG | - | chr8.1:23902252-23902271 | None:intergenic | 45.0% | |
CCTTAAAGAGGATGAGGATG+AGG | + | chr8.1:23902249-23902268 | MS.gene60378:CDS | 45.0% | |
CGAGCTCATGAAATTCGATC+AGG | + | chr8.1:23901637-23901656 | MS.gene60378:CDS | 45.0% | |
CTATTTCCAAACCCCCTCTT+AGG | + | chr8.1:23899648-23899667 | MS.gene60378:intron | 45.0% | |
CTTAGGCCTTGGTTTATCCT+TGG | + | chr8.1:23899665-23899684 | MS.gene60378:intron | 45.0% | |
CTTGCAAGTTGCAACCACTT+TGG | - | chr8.1:23901734-23901753 | None:intergenic | 45.0% | |
GAGGGTGATTCTAATTGTCC+TGG | + | chr8.1:23897815-23897834 | MS.gene60378:intron | 45.0% | |
GAGGTTGTTCCATTGAATGC+TGG | + | chr8.1:23899799-23899818 | MS.gene60378:CDS | 45.0% | |
GATAAACCAAGGCCTAAGAG+GGG | - | chr8.1:23899663-23899682 | None:intergenic | 45.0% | |
GATGGCAATGGGTATCCTAT+CGG | - | chr8.1:23898780-23898799 | None:intergenic | 45.0% | |
GCCCTTCCAGAAATTCTCAA+AGG | - | chr8.1:23899691-23899710 | None:intergenic | 45.0% | |
GGATAAACCAAGGCCTAAGA+GGG | - | chr8.1:23899664-23899683 | None:intergenic | 45.0% | |
GTTATGGAGCGAAAAGCAAC+AGG | + | chr8.1:23900233-23900252 | MS.gene60378:CDS | 45.0% | |
TGTGATCGCATATTGTGGCT+CGG | + | chr8.1:23902067-23902086 | MS.gene60378:CDS | 45.0% | |
TTTCTGACCTGAAGCCAGAT+GGG | - | chr8.1:23901151-23901170 | None:intergenic | 45.0% | |
! | AAACGAGTGTCGTATAGGGA+TGG | + | chr8.1:23898221-23898240 | MS.gene60378:intron | 45.0% |
! | AGCTAATGAGGTTCTAACCG+AGG | + | chr8.1:23899603-23899622 | MS.gene60378:intron | 45.0% |
! | ATTTCTGGAAGGGCTTCCTT+TGG | + | chr8.1:23899697-23899716 | MS.gene60378:intron | 45.0% |
! | CATGAGTAAGCCAGCTGTTT+TGG | + | chr8.1:23901273-23901292 | MS.gene60378:intron | 45.0% |
! | CCTTGGCCTTTGAGAATTTC+TGG | + | chr8.1:23899682-23899701 | MS.gene60378:intron | 45.0% |
! | GGCCTTTGAGAATTTCTGGA+AGG | + | chr8.1:23899686-23899705 | MS.gene60378:intron | 45.0% |
! | TATGGGCTACATGGGAAACA+AGG | + | chr8.1:23900503-23900522 | MS.gene60378:CDS | 45.0% |
! | TGGAAATGTGTTTGGAGCTG+AGG | + | chr8.1:23899819-23899838 | MS.gene60378:CDS | 45.0% |
! | TTTCTGGAAGGGCTTCCTTT+GGG | + | chr8.1:23899698-23899717 | MS.gene60378:intron | 45.0% |
!! | GTGCTTTGTTTGTTCCCATC+TGG | + | chr8.1:23901134-23901153 | MS.gene60378:CDS | 45.0% |
!! | GTTGGTCTTATGGGCTACAT+GGG | + | chr8.1:23900495-23900514 | MS.gene60378:CDS | 45.0% |
!! | TAGAAGCATCTTTGCGCTTG+GGG | + | chr8.1:23899571-23899590 | MS.gene60378:intron | 45.0% |
!! | TGTTGGTCTTATGGGCTACA+TGG | + | chr8.1:23900494-23900513 | MS.gene60378:CDS | 45.0% |
AACCCTGCTTTCATGGATCC+GGG | + | chr8.1:23898301-23898320 | MS.gene60378:intron | 50.0% | |
CACTAAAGTTGTTGGCCACG+AGG | + | chr8.1:23898689-23898708 | MS.gene60378:intron | 50.0% | |
CATGCTTGCACTTACCATGC+TGG | - | chr8.1:23901990-23902009 | None:intergenic | 50.0% | |
CTGGCTTCAGGTCAGAAAGA+TGG | + | chr8.1:23901153-23901172 | MS.gene60378:CDS | 50.0% | |
CTTTCTGACCTGAAGCCAGA+TGG | - | chr8.1:23901152-23901171 | None:intergenic | 50.0% | |
GCAGGTGTGATCGCATATTG+TGG | + | chr8.1:23902062-23902081 | MS.gene60378:intron | 50.0% | |
GTGAAACGAAACACGCTGCA+AGG | + | chr8.1:23899028-23899047 | MS.gene60378:intron | 50.0% | |
GTGGGTGGGAATACACAAGA+AGG | + | chr8.1:23901948-23901967 | MS.gene60378:CDS | 50.0% | |
TACCCGGATCCATGAAAGCA+GGG | - | chr8.1:23898306-23898325 | None:intergenic | 50.0% | |
TAGCTCGTTGTAACTTCCGG+TGG | - | chr8.1:23902192-23902211 | None:intergenic | 50.0% | |
TTACCCGGATCCATGAAAGC+AGG | - | chr8.1:23898307-23898326 | None:intergenic | 50.0% | |
! | CAGCTGGCTTACTCATGTGA+TGG | - | chr8.1:23901270-23901289 | None:intergenic | 50.0% |
! | CGCATATTGTGGCTCGGAAA+AGG | + | chr8.1:23902073-23902092 | MS.gene60378:CDS | 50.0% |
! | GGGTTTTACCCTACCCAATG+AGG | - | chr8.1:23898286-23898305 | None:intergenic | 50.0% |
! | GGTTAGTCGCACGTTTGGTT+TGG | - | chr8.1:23899070-23899089 | None:intergenic | 50.0% |
! | GTTTGTTCCCATCTGGCTTC+AGG | + | chr8.1:23901141-23901160 | MS.gene60378:CDS | 50.0% |
! | TTCTCGGTTAGTCGCACGTT+TGG | - | chr8.1:23899075-23899094 | None:intergenic | 50.0% |
! | TTCTGGAAGGGCTTCCTTTG+GGG | + | chr8.1:23899699-23899718 | MS.gene60378:intron | 50.0% |
!! | TAGTCGCACGTTTGGTTTGG+TGG | - | chr8.1:23899067-23899086 | None:intergenic | 50.0% |
!!! | CGACACTCGTTTTAAGACGG+AGG | - | chr8.1:23898213-23898232 | None:intergenic | 50.0% |
AACCAGCAATAGACGCGCCT+CGG | - | chr8.1:23899623-23899642 | None:intergenic | 55.0% | |
ACGAGGATACGCGTTGGGTA+TGG | + | chr8.1:23898706-23898725 | MS.gene60378:intron | 55.0% | |
AGTGGGTATGGACGCGAGTA+AGG | + | chr8.1:23898342-23898361 | MS.gene60378:intron | 55.0% | |
ATACCCAACGCGTATCCTCG+TGG | - | chr8.1:23898707-23898726 | None:intergenic | 55.0% | |
CGAGGATACGCGTTGGGTAT+GGG | + | chr8.1:23898707-23898726 | MS.gene60378:intron | 55.0% | |
GGGCAATGACGCAGCTAATG+AGG | + | chr8.1:23899591-23899610 | MS.gene60378:intron | 55.0% | |
GTAATTGGGCCCAAGTCCGA+TGG | + | chr8.1:23898243-23898262 | MS.gene60378:intron | 55.0% | |
GTGGGTATGGACGCGAGTAA+GGG | + | chr8.1:23898343-23898362 | MS.gene60378:intron | 55.0% | |
TACGGGTGTCCATCGGACTT+GGG | - | chr8.1:23898255-23898274 | None:intergenic | 55.0% | |
TTACGGGTGTCCATCGGACT+TGG | - | chr8.1:23898256-23898275 | None:intergenic | 55.0% | |
AACCGAGGCGCGTCTATTGC+TGG | + | chr8.1:23899618-23899637 | MS.gene60378:intron | 60.0% | |
CCAAACCCCCTCTTAGGCCT+TGG | + | chr8.1:23899654-23899673 | MS.gene60378:intron | 60.0% | |
CCAAGGCCTAAGAGGGGGTT+TGG | - | chr8.1:23899657-23899676 | None:intergenic | 60.0% | |
TGGCCACGAGGATACGCGTT+GGG | + | chr8.1:23898701-23898720 | MS.gene60378:intron | 60.0% | |
TTGGCCACGAGGATACGCGT+TGG | + | chr8.1:23898700-23898719 | MS.gene60378:intron | 60.0% | |
! | TGTATGCGGGTTGCGGAGCT+GGG | - | chr8.1:23898379-23898398 | None:intergenic | 60.0% |
! | GTGTATGCGGGTTGCGGAGC+TGG | - | chr8.1:23898380-23898399 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 23897357 | 23902288 | 23897357 | ID=MS.gene60378 |
chr8.1 | mRNA | 23897357 | 23902288 | 23897357 | ID=MS.gene60378.t1;Parent=MS.gene60378 |
chr8.1 | exon | 23897357 | 23897377 | 23897357 | ID=MS.gene60378.t1.exon1;Parent=MS.gene60378.t1 |
chr8.1 | CDS | 23897357 | 23897377 | 23897357 | ID=cds.MS.gene60378.t1;Parent=MS.gene60378.t1 |
chr8.1 | exon | 23897472 | 23897580 | 23897472 | ID=MS.gene60378.t1.exon2;Parent=MS.gene60378.t1 |
chr8.1 | CDS | 23897472 | 23897580 | 23897472 | ID=cds.MS.gene60378.t1;Parent=MS.gene60378.t1 |
chr8.1 | exon | 23899201 | 23899291 | 23899201 | ID=MS.gene60378.t1.exon3;Parent=MS.gene60378.t1 |
chr8.1 | CDS | 23899201 | 23899291 | 23899201 | ID=cds.MS.gene60378.t1;Parent=MS.gene60378.t1 |
chr8.1 | exon | 23899385 | 23899489 | 23899385 | ID=MS.gene60378.t1.exon4;Parent=MS.gene60378.t1 |
chr8.1 | CDS | 23899385 | 23899489 | 23899385 | ID=cds.MS.gene60378.t1;Parent=MS.gene60378.t1 |
chr8.1 | exon | 23899792 | 23900524 | 23899792 | ID=MS.gene60378.t1.exon5;Parent=MS.gene60378.t1 |
chr8.1 | CDS | 23899792 | 23900524 | 23899792 | ID=cds.MS.gene60378.t1;Parent=MS.gene60378.t1 |
chr8.1 | exon | 23901093 | 23901277 | 23901093 | ID=MS.gene60378.t1.exon6;Parent=MS.gene60378.t1 |
chr8.1 | CDS | 23901093 | 23901277 | 23901093 | ID=cds.MS.gene60378.t1;Parent=MS.gene60378.t1 |
chr8.1 | exon | 23901550 | 23901658 | 23901550 | ID=MS.gene60378.t1.exon7;Parent=MS.gene60378.t1 |
chr8.1 | CDS | 23901550 | 23901658 | 23901550 | ID=cds.MS.gene60378.t1;Parent=MS.gene60378.t1 |
chr8.1 | exon | 23901846 | 23901994 | 23901846 | ID=MS.gene60378.t1.exon8;Parent=MS.gene60378.t1 |
chr8.1 | CDS | 23901846 | 23901994 | 23901846 | ID=cds.MS.gene60378.t1;Parent=MS.gene60378.t1 |
chr8.1 | exon | 23902066 | 23902288 | 23902066 | ID=MS.gene60378.t1.exon9;Parent=MS.gene60378.t1 |
chr8.1 | CDS | 23902066 | 23902288 | 23902066 | ID=cds.MS.gene60378.t1;Parent=MS.gene60378.t1 |
Gene Sequence |
Protein sequence |