Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60478.t1 | BBH05442.1 | 67.3 | 468 | 60 | 3 | 1 | 375 | 1 | 468 | 6.10E-148 | 534.3 |
| MS.gene60478.t1 | BBH05442.1 | 47.6 | 126 | 60 | 2 | 367 | 486 | 710 | 835 | 2.50E-16 | 97.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60478.t1 | P10978 | 26.5 | 475 | 236 | 10 | 7 | 375 | 5 | 472 | 1.4e-39 | 165.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60478.t1 | A0A4Y1RM46 | 67.3 | 468 | 60 | 3 | 1 | 375 | 1 | 468 | 4.4e-148 | 534.3 |
| MS.gene60478.t1 | A0A4Y1RM46 | 47.6 | 126 | 60 | 2 | 367 | 486 | 710 | 835 | 1.8e-16 | 97.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052736 | MS.gene60478 | 0.803714 | 3.06E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60478.t1 | MTR_2g039140 | 40.217 | 184 | 77 | 2 | 1 | 183 | 120 | 271 | 1.64e-31 | 122 |
| MS.gene60478.t1 | MTR_4g036430 | 89.744 | 39 | 4 | 0 | 1 | 39 | 31 | 69 | 2.74e-19 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60478.t1 | AT3G29785 | 57.778 | 90 | 37 | 1 | 11 | 100 | 7 | 95 | 9.40e-30 | 112 |
Find 111 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATACCAACTGAACTTAAT+TGG | 0.095422 | 3.2:+20085743 | None:intergenic |
| CTGAGAACTACGATGATTTC+TGG | 0.189947 | 3.2:+20085459 | None:intergenic |
| ATCTCATCTGTGGGACTTCC+TGG | 0.243179 | 3.2:+20083957 | None:intergenic |
| TCATCATCCTTCATCGATTC+TGG | 0.247368 | 3.2:+20086003 | None:intergenic |
| CTAGAAGACCTTCTTAATTC+AGG | 0.247761 | 3.2:+20083861 | None:intergenic |
| TTCGCCTCTTGATTCTTTGC+TGG | 0.253882 | 3.2:+20085370 | None:intergenic |
| CTCTGGTCTCTTATTCTAAC+AGG | 0.293382 | 3.2:+20082248 | None:intergenic |
| ACTACGATGATTTCTGGATT+TGG | 0.314338 | 3.2:+20085465 | None:intergenic |
| TTCTGCCAATTCCTCTGATT+GGG | 0.327914 | 3.2:+20083932 | None:intergenic |
| ATTTCTGGATTTGGATTGTC+TGG | 0.336440 | 3.2:+20085474 | None:intergenic |
| ATTCTGCCAATTCCTCTGAT+TGG | 0.336830 | 3.2:+20083931 | None:intergenic |
| TCGCCTCTTGATTCTTTGCT+GGG | 0.374564 | 3.2:+20085371 | None:intergenic |
| ATGGTGCGGACTTTGGCTTT+TGG | 0.377376 | 3.2:-20086089 | MS.gene60478:CDS |
| GATACCAACTGAACTTAATT+GGG | 0.381678 | 3.2:+20085744 | None:intergenic |
| CAAATGAAAATCCTAATCTA+TGG | 0.386419 | 3.2:-20084910 | MS.gene60478:CDS |
| AATCTCTTGTGCCATAGATT+AGG | 0.388549 | 3.2:+20084899 | None:intergenic |
| CATGCTTCATCATAATCTTC+AGG | 0.392057 | 3.2:+20083780 | None:intergenic |
| GTAGAGATGGATGATGTTCC+AGG | 0.394130 | 3.2:-20083975 | MS.gene60478:CDS |
| GATTCCCCAATCAGAGGAAT+TGG | 0.403290 | 3.2:-20083937 | MS.gene60478:CDS |
| GACCTTCTTAATTCAGGAAC+TGG | 0.408428 | 3.2:+20083867 | None:intergenic |
| ACAGTAGCACTCCAACTATC+TGG | 0.413891 | 3.2:+20085676 | None:intergenic |
| TCATCCATCTCTACATAAAC+AGG | 0.414467 | 3.2:+20083984 | None:intergenic |
| AGAAATTCAACCAGAGGAAA+TGG | 0.417568 | 3.2:-20085514 | MS.gene60478:CDS |
| TGTCTTCCCTACCAGATAGT+TGG | 0.424640 | 3.2:-20085687 | MS.gene60478:CDS |
| TAGTTTATGTATCTGCTGTT+TGG | 0.431465 | 3.2:+20083828 | None:intergenic |
| TGTAGCCTTCGTCAGCCAAC+TGG | 0.439978 | 3.2:+20085053 | None:intergenic |
| GAGATCCGACGGAGAGAGTT+GGG | 0.442215 | 3.2:-20085580 | MS.gene60478:CDS |
| GCAAATGTTGCTTCCACCTC+AGG | 0.445655 | 3.2:-20085340 | MS.gene60478:CDS |
| CAGTCTTCCACGGTGATGAC+TGG | 0.446820 | 3.2:-20085027 | MS.gene60478:CDS |
| AAGTTCGATGGTGCGGACTT+TGG | 0.452497 | 3.2:-20086096 | MS.gene60478:CDS |
| AATCTATGGCACAAGAGATT+AGG | 0.468903 | 3.2:-20084896 | MS.gene60478:CDS |
| TTAGGCCATATGAGTGAAAA+GGG | 0.472747 | 3.2:-20084878 | MS.gene60478:CDS |
| TGAACTTTATTTGATGCTGA+AGG | 0.474628 | 3.2:+20085850 | None:intergenic |
| ATTTGATGATGTTCGTGATC+TGG | 0.482957 | 3.2:-20085614 | MS.gene60478:CDS |
| AAGGAAAACTACCAAGTCTT+CGG | 0.487272 | 3.2:-20084835 | MS.gene60478:CDS |
| TTTACCACGTCCATTTCCTC+TGG | 0.487326 | 3.2:+20085504 | None:intergenic |
| ACCTTTGTTAACATATCTGC+GGG | 0.491781 | 3.2:+20082313 | None:intergenic |
| TTGTTGCAACTGCAATCAAA+TGG | 0.491822 | 3.2:+20084930 | None:intergenic |
| ATTAGGCCATATGAGTGAAA+AGG | 0.493480 | 3.2:-20084879 | MS.gene60478:CDS |
| CTTAATTCAGGAACTGGAGT+AGG | 0.496648 | 3.2:+20083873 | None:intergenic |
| ATGAAGGTTATGCACTCAAA+AGG | 0.501665 | 3.2:-20084854 | MS.gene60478:CDS |
| ATATGTGAAGACTGTATACT+TGG | 0.507653 | 3.2:-20084797 | MS.gene60478:CDS |
| TCTATCGAGTGTTGGAATTG+TGG | 0.512167 | 3.2:-20085427 | MS.gene60478:CDS |
| AACTACATGTTGTTAACTGA+TGG | 0.513907 | 3.2:-20083810 | MS.gene60478:CDS |
| CGCGTCACCTCCTCCTGAGG+TGG | 0.515832 | 3.2:+20085327 | None:intergenic |
| ACTCTTTCTACCGCGAGCTA+TGG | 0.525718 | 3.2:+20084982 | None:intergenic |
| CACAGCTGTGAGTAGCTCCT+CGG | 0.527844 | 3.2:-20085653 | MS.gene60478:CDS |
| CTCCAGTTCCTGAATTAAGA+AGG | 0.530952 | 3.2:-20083869 | MS.gene60478:CDS |
| ATTTCTATTGACCGAAGACT+TGG | 0.531290 | 3.2:+20084824 | None:intergenic |
| TATGAGTGAAAAGGGGATGA+AGG | 0.531430 | 3.2:-20084870 | MS.gene60478:CDS |
| GATGACTGGAAGATTTCAAA+AGG | 0.532022 | 3.2:-20085013 | MS.gene60478:CDS |
| ACAGCTGTGAGTAGCTCCTC+GGG | 0.532462 | 3.2:-20085652 | MS.gene60478:CDS |
| CTTAATCTCCGTAGGCCAGT+TGG | 0.533019 | 3.2:-20085068 | MS.gene60478:intron |
| AAAGAAACCAGAATCGATGA+AGG | 0.539324 | 3.2:-20086010 | MS.gene60478:CDS |
| TGTTGGAATTGTGGAAAGAC+GGG | 0.540082 | 3.2:-20085418 | MS.gene60478:CDS |
| GATTGGGGAATCTCATCTGT+GGG | 0.541163 | 3.2:+20083948 | None:intergenic |
| TGATTGGGGAATCTCATCTG+TGG | 0.543207 | 3.2:+20083947 | None:intergenic |
| CGCAGATATGTTAACAAAGG+TGG | 0.548479 | 3.2:-20082311 | MS.gene60478:CDS |
| AGAGATCCGACGGAGAGAGT+TGG | 0.549236 | 3.2:-20085581 | MS.gene60478:CDS |
| GGTACTCTTTACAAGACAGC+TGG | 0.550162 | 3.2:-20084959 | MS.gene60478:CDS |
| CAAATAAAGTTCATTTGATG+AGG | 0.550433 | 3.2:-20085840 | MS.gene60478:CDS |
| GGAACTGGAGTAGGATGCAC+TGG | 0.552002 | 3.2:+20083882 | None:intergenic |
| AACCACCGCTGGTCTTATGA+AGG | 0.557775 | 3.2:-20085896 | MS.gene60478:CDS |
| TAGCACTCCAACTATCTGGT+AGG | 0.558134 | 3.2:+20085680 | None:intergenic |
| ACTCGAAATCTATCGAGTGT+TGG | 0.561027 | 3.2:-20085435 | MS.gene60478:CDS |
| GTGAAAATTGAAAAGTTCGA+TGG | 0.563926 | 3.2:-20086108 | MS.gene60478:CDS |
| GTGTTGGAATTGTGGAAAGA+CGG | 0.567490 | 3.2:-20085419 | MS.gene60478:CDS |
| CTCTGTATGCAATACTGAAG+AGG | 0.567853 | 3.2:+20085546 | None:intergenic |
| ACAACCCAATTAAGTTCAGT+TGG | 0.568124 | 3.2:-20085748 | MS.gene60478:CDS |
| AAGTTGTGCTCAACTTCAGT+TGG | 0.568559 | 3.2:-20082271 | MS.gene60478:CDS |
| GTTGCTTCCACCTCAGGAGG+AGG | 0.568689 | 3.2:-20085334 | MS.gene60478:intron |
| TCTGCCAATTCCTCTGATTG+GGG | 0.571085 | 3.2:+20083933 | None:intergenic |
| TTTACACTTCGGATGACAGA+AGG | 0.576141 | 3.2:-20085811 | MS.gene60478:CDS |
| CTCCCACTTACTAGCATCCG+TGG | 0.588137 | 3.2:+20083752 | None:intergenic |
| GATGACAGAAGGCGCATCAG+TGG | 0.593273 | 3.2:-20085800 | MS.gene60478:CDS |
| CACCTTTGTTAACATATCTG+CGG | 0.595625 | 3.2:+20082312 | None:intergenic |
| AAATGGACGTGGTAAATCAA+AGG | 0.596335 | 3.2:-20085497 | MS.gene60478:CDS |
| AGCACTCCAACTATCTGGTA+GGG | 0.597976 | 3.2:+20085681 | None:intergenic |
| TGAGGCGGTTGTTTACACTT+CGG | 0.598027 | 3.2:-20085822 | MS.gene60478:CDS |
| ATAAAGTTCATTTGATGAGG+CGG | 0.598437 | 3.2:-20085837 | MS.gene60478:CDS |
| CTTCTCGATAGACAAGCACT+TGG | 0.601850 | 3.2:-20085973 | MS.gene60478:CDS |
| CGAGCCTGTTTATGTAGAGA+TGG | 0.602356 | 3.2:-20083988 | MS.gene60478:CDS |
| AATGTTGCTTCCACCTCAGG+AGG | 0.603928 | 3.2:-20085337 | MS.gene60478:CDS |
| AATCGATGAAGGATGATGAG+TGG | 0.606445 | 3.2:-20085999 | MS.gene60478:CDS |
| AATTGAAAAGTTCGATGGTG+CGG | 0.608192 | 3.2:-20086103 | MS.gene60478:CDS |
| GGCTACACAACAGTCTTCCA+CGG | 0.609498 | 3.2:-20085037 | MS.gene60478:CDS |
| CAAGTGCTTGTCTATCGAGA+AGG | 0.612004 | 3.2:+20085974 | None:intergenic |
| TATGGCTGCAGACGAAGGAA+AGG | 0.614378 | 3.2:-20086130 | MS.gene60478:CDS |
| TACATGTTGTTAACTGATGG+AGG | 0.616383 | 3.2:-20083807 | MS.gene60478:CDS |
| GGAGTTATGGCTGCAGACGA+AGG | 0.617375 | 3.2:-20086135 | None:intergenic |
| ATTCACCCAACTCTCTCCGT+CGG | 0.618585 | 3.2:+20085575 | None:intergenic |
| AGCCTTCATAAGACCAGCGG+TGG | 0.620835 | 3.2:+20085894 | None:intergenic |
| GAATCAAGAGGCGAAAGATG+AGG | 0.623736 | 3.2:-20085362 | MS.gene60478:CDS |
| GCAAAAGAGAAAACCACCGC+TGG | 0.626545 | 3.2:-20085907 | MS.gene60478:CDS |
| AGATGAGATTCCCCAATCAG+AGG | 0.627217 | 3.2:-20083943 | MS.gene60478:CDS |
| TACTCAGTGAAGAGATCCGA+CGG | 0.629113 | 3.2:-20085591 | MS.gene60478:CDS |
| CAACGCGTCACCTCCTCCTG+AGG | 0.630580 | 3.2:+20085324 | None:intergenic |
| TGGTATCGAATTTGACGATG+AGG | 0.639552 | 3.2:-20085728 | MS.gene60478:CDS |
| AGAGGAAGAAATTCAACCAG+AGG | 0.643795 | 3.2:-20085520 | MS.gene60478:CDS |
| ATAGCTCGCGGTAGAAAGAG+TGG | 0.650828 | 3.2:-20084980 | MS.gene60478:CDS |
| GTAGGCCAGTTGGCTGACGA+AGG | 0.651906 | 3.2:-20085058 | MS.gene60478:intron |
| TCCCGCAGATATGTTAACAA+AGG | 0.657588 | 3.2:-20082314 | MS.gene60478:CDS |
| TCAACCAGAGGAAATGGACG+TGG | 0.665050 | 3.2:-20085508 | MS.gene60478:CDS |
| GCTCCCAGCAAAGAATCAAG+AGG | 0.671318 | 3.2:-20085374 | MS.gene60478:CDS |
| GGATGCACTGGTGTGTCAGA+CGG | 0.673844 | 3.2:+20083894 | None:intergenic |
| GTATTGCATACAGAGTCAAG+AGG | 0.682691 | 3.2:-20085538 | MS.gene60478:CDS |
| TAGGCCATATGAGTGAAAAG+GGG | 0.691407 | 3.2:-20084877 | MS.gene60478:CDS |
| TGATGAAGCATGTCAGACCA+CGG | 0.691661 | 3.2:-20083769 | MS.gene60478:CDS |
| AAGAGCCTTCATAAGACCAG+CGG | 0.707222 | 3.2:+20085891 | None:intergenic |
| GGTGCAATGACCATAGCTCG+CGG | 0.728572 | 3.2:-20084992 | MS.gene60478:CDS |
| AAATCTTCCAGTCATCACCG+TGG | 0.733529 | 3.2:+20085020 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTTAAGATTAAGTTGAAT+GGG | - | chr3.2:20083246-20083265 | MS.gene60478:intron | 20.0% |
| ! | AATTCTTGAAGAATTCTTTC+TGG | + | chr3.2:20083157-20083176 | None:intergenic | 25.0% |
| ! | ACTGGTTATATATTTACTGT+TGG | - | chr3.2:20085750-20085769 | MS.gene60478:CDS | 25.0% |
| ! | ATAGCAAAACTTCTTGAATT+TGG | + | chr3.2:20083903-20083922 | None:intergenic | 25.0% |
| ! | ATTCTTGAAGAATTCTTTCT+GGG | + | chr3.2:20083156-20083175 | None:intergenic | 25.0% |
| ! | CAAATAAAGTTCATTTGATG+AGG | - | chr3.2:20082547-20082566 | MS.gene60478:intron | 25.0% |
| ! | CAAATGAAAATCCTAATCTA+TGG | - | chr3.2:20083477-20083496 | MS.gene60478:intron | 25.0% |
| ! | CTAACATTGATCAAAATTCA+AGG | - | chr3.2:20086041-20086060 | MS.gene60478:CDS | 25.0% |
| ! | TATATATTTACTGTTGGTAC+TGG | - | chr3.2:20085756-20085775 | MS.gene60478:CDS | 25.0% |
| !!! | GAAGTTAAGATTAAGTTGAA+TGG | - | chr3.2:20083245-20083264 | MS.gene60478:intron | 25.0% |
| AAAGAATTGATATGGCTTCA+AGG | - | chr3.2:20085861-20085880 | MS.gene60478:CDS | 30.0% | |
| AAAGGAGAGATAAAAGTAGA+AGG | - | chr3.2:20085678-20085697 | MS.gene60478:CDS | 30.0% | |
| AAATGTTTGTACTTCAGCAA+AGG | - | chr3.2:20085660-20085679 | MS.gene60478:CDS | 30.0% | |
| AACTACATGTTGTTAACTGA+TGG | - | chr3.2:20084577-20084596 | MS.gene60478:intron | 30.0% | |
| AAGCTAGCAAAGAATTGATA+TGG | - | chr3.2:20085853-20085872 | MS.gene60478:CDS | 30.0% | |
| AGAAAAAGGGAAAGAGAATA+TGG | - | chr3.2:20085008-20085027 | MS.gene60478:CDS | 30.0% | |
| ATAAAATACCAGAAGAGGTA+TGG | - | chr3.2:20084119-20084138 | MS.gene60478:intron | 30.0% | |
| ATAAAGTTCATTTGATGAGG+CGG | - | chr3.2:20082550-20082569 | MS.gene60478:intron | 30.0% | |
| ATATGTGAAGACTGTATACT+TGG | - | chr3.2:20083590-20083609 | MS.gene60478:intron | 30.0% | |
| GATACCAACTGAACTTAATT+GGG | + | chr3.2:20082646-20082665 | None:intergenic | 30.0% | |
| GGATGATGAAAACAAAAAGA+TGG | - | chr3.2:20084294-20084313 | MS.gene60478:intron | 30.0% | |
| GTGAAAATTGAAAAGTTCGA+TGG | - | chr3.2:20082279-20082298 | MS.gene60478:CDS | 30.0% | |
| TACAAGATTGTTCATTTCCA+AGG | + | chr3.2:20083208-20083227 | None:intergenic | 30.0% | |
| TAGAAGGATTCTCAGAAAAA+GGG | - | chr3.2:20084995-20085014 | MS.gene60478:CDS | 30.0% | |
| TAGTTTATGTATCTGCTGTT+TGG | + | chr3.2:20084562-20084581 | None:intergenic | 30.0% | |
| TATAACCAGTTGTACTTCTT+CGG | + | chr3.2:20085740-20085759 | None:intergenic | 30.0% | |
| TATGTGCATATTAGTGATCA+AGG | - | chr3.2:20084193-20084212 | MS.gene60478:intron | 30.0% | |
| TGGAAATGAACAATCTTGTA+AGG | - | chr3.2:20083208-20083227 | MS.gene60478:intron | 30.0% | |
| TGTTGAATCTTTGCAAAACA+CGG | + | chr3.2:20085374-20085393 | None:intergenic | 30.0% | |
| ! | GTTTTGCAAAGATTCAACAT+GGG | - | chr3.2:20085375-20085394 | MS.gene60478:CDS | 30.0% |
| ! | TATTTGAAGCTTTCAAGAGA+TGG | - | chr3.2:20083801-20083820 | MS.gene60478:CDS | 30.0% |
| ! | TGAACTTTATTTGATGCTGA+AGG | + | chr3.2:20082540-20082559 | None:intergenic | 30.0% |
| ! | TGTTTTGCAAAGATTCAACA+TGG | - | chr3.2:20085374-20085393 | MS.gene60478:CDS | 30.0% |
| AAAGAAACCAGAATCGATGA+AGG | - | chr3.2:20082377-20082396 | MS.gene60478:intron | 35.0% | |
| AAAGAGTGATGTACAAAGAC+AGG | - | chr3.2:20084344-20084363 | MS.gene60478:intron | 35.0% | |
| AAAGTGCACTTCTTGGATTT+GGG | + | chr3.2:20084235-20084254 | None:intergenic | 35.0% | |
| AAATCCAGGTAAAGCTCATT+GGG | - | chr3.2:20085593-20085612 | MS.gene60478:CDS | 35.0% | |
| AAATGGACGTGGTAAATCAA+AGG | - | chr3.2:20082890-20082909 | MS.gene60478:intron | 35.0% | |
| AACCTTGGTAAAGTTTACCT+TGG | - | chr3.2:20083188-20083207 | MS.gene60478:intron | 35.0% | |
| AAGAAAAAGAACTCATGGTC+AGG | - | chr3.2:20085472-20085491 | MS.gene60478:CDS | 35.0% | |
| AAGGAAAACTACCAAGTCTT+CGG | - | chr3.2:20083552-20083571 | MS.gene60478:intron | 35.0% | |
| AATCTATGGCACAAGAGATT+AGG | - | chr3.2:20083491-20083510 | MS.gene60478:intron | 35.0% | |
| AATCTCTTGTGCCATAGATT+AGG | + | chr3.2:20083491-20083510 | None:intergenic | 35.0% | |
| AATTGAAAAGTTCGATGGTG+CGG | - | chr3.2:20082284-20082303 | MS.gene60478:CDS | 35.0% | |
| ACAACCCAATTAAGTTCAGT+TGG | - | chr3.2:20082639-20082658 | MS.gene60478:intron | 35.0% | |
| ACCTTTGTTAACATATCTGC+GGG | + | chr3.2:20086077-20086096 | None:intergenic | 35.0% | |
| ACGAAAAACTTAATCTCCGT+AGG | - | chr3.2:20083311-20083330 | MS.gene60478:intron | 35.0% | |
| AGAAATTCAACCAGAGGAAA+TGG | - | chr3.2:20082873-20082892 | MS.gene60478:intron | 35.0% | |
| AGAAGGAACTTCACAACAAA+TGG | - | chr3.2:20084731-20084750 | MS.gene60478:intron | 35.0% | |
| AGACTTCATTTCGTCTTTCA+TGG | + | chr3.2:20084665-20084684 | None:intergenic | 35.0% | |
| AGGTTAAAGAAGAGCTTGTA+TGG | - | chr3.2:20085036-20085055 | MS.gene60478:CDS | 35.0% | |
| ATATACATGCACCAACTAGA+AGG | - | chr3.2:20084979-20084998 | MS.gene60478:CDS | 35.0% | |
| ATCACGAGAGATAAGCAAAA+AGG | - | chr3.2:20085315-20085334 | MS.gene60478:intron | 35.0% | |
| ATCTCTTGAAGAAGCAACAA+TGG | + | chr3.2:20085143-20085162 | None:intergenic | 35.0% | |
| ATGAAGGTTATGCACTCAAA+AGG | - | chr3.2:20083533-20083552 | MS.gene60478:intron | 35.0% | |
| ATTAGGCCATATGAGTGAAA+AGG | - | chr3.2:20083508-20083527 | MS.gene60478:intron | 35.0% | |
| ATTCCATATGCTTCAGCAAT+TGG | - | chr3.2:20085495-20085514 | MS.gene60478:CDS | 35.0% | |
| ATTTCTATTGACCGAAGACT+TGG | + | chr3.2:20083566-20083585 | None:intergenic | 35.0% | |
| CAAGGATTGTTAACAGAGTT+AGG | - | chr3.2:20085879-20085898 | MS.gene60478:CDS | 35.0% | |
| CACCTTTGTTAACATATCTG+CGG | + | chr3.2:20086078-20086097 | None:intergenic | 35.0% | |
| CATGCTTCATCATAATCTTC+AGG | + | chr3.2:20084610-20084629 | None:intergenic | 35.0% | |
| CGATACCAACTGAACTTAAT+TGG | + | chr3.2:20082647-20082666 | None:intergenic | 35.0% | |
| CTAGAAGACCTTCTTAATTC+AGG | + | chr3.2:20084529-20084548 | None:intergenic | 35.0% | |
| CTAGAAGGATTCTCAGAAAA+AGG | - | chr3.2:20084994-20085013 | MS.gene60478:CDS | 35.0% | |
| GAACAATCTTGTAAGGTTGT+GGG | - | chr3.2:20083215-20083234 | MS.gene60478:intron | 35.0% | |
| GAAGGAACTTCACAACAAAT+GGG | - | chr3.2:20084732-20084751 | MS.gene60478:intron | 35.0% | |
| GAAGTACAAACATTTCTCTG+TGG | + | chr3.2:20085655-20085674 | None:intergenic | 35.0% | |
| GACACTTCAAAAATCAGTGT+AGG | - | chr3.2:20082991-20083010 | MS.gene60478:intron | 35.0% | |
| GAGTTTGACATGAAGGATTT+AGG | - | chr3.2:20085264-20085283 | MS.gene60478:intron | 35.0% | |
| GATGACTGGAAGATTTCAAA+AGG | - | chr3.2:20083374-20083393 | MS.gene60478:intron | 35.0% | |
| GGTCAGGTAAAGAAAATTCT+TGG | - | chr3.2:20085285-20085304 | MS.gene60478:intron | 35.0% | |
| GTAAACTTTACCAAGGTTAC+CGG | + | chr3.2:20083186-20083205 | None:intergenic | 35.0% | |
| GTCAAAAGAGTTTGACATGA+AGG | - | chr3.2:20085257-20085276 | MS.gene60478:intron | 35.0% | |
| TAAACTTTACCAAGGTTACC+GGG | + | chr3.2:20083185-20083204 | None:intergenic | 35.0% | |
| TACATGTTGTTAACTGATGG+AGG | - | chr3.2:20084580-20084599 | MS.gene60478:intron | 35.0% | |
| TCATCCATCTCTACATAAAC+AGG | + | chr3.2:20084406-20084425 | None:intergenic | 35.0% | |
| TCTTCATGGAGACTTAAATG+AGG | - | chr3.2:20084954-20084973 | MS.gene60478:CDS | 35.0% | |
| TGAACAATCTTGTAAGGTTG+TGG | - | chr3.2:20083214-20083233 | MS.gene60478:intron | 35.0% | |
| TTAGGCCATATGAGTGAAAA+GGG | - | chr3.2:20083509-20083528 | MS.gene60478:intron | 35.0% | |
| TTCATATTCACCACCATTGT+CGG | + | chr3.2:20083876-20083895 | None:intergenic | 35.0% | |
| TTCCAAGGTAAACTTTACCA+AGG | + | chr3.2:20083193-20083212 | None:intergenic | 35.0% | |
| TTCTTCAAGAATTATGTCCC+CGG | - | chr3.2:20083164-20083183 | MS.gene60478:intron | 35.0% | |
| TTGTTGCAACTGCAATCAAA+TGG | + | chr3.2:20083460-20083479 | None:intergenic | 35.0% | |
| TTTGATCTCCAATCAGACAT+GGG | - | chr3.2:20084684-20084703 | MS.gene60478:intron | 35.0% | |
| ! | ACTACGATGATTTCTGGATT+TGG | + | chr3.2:20082925-20082944 | None:intergenic | 35.0% |
| ! | ATTAAGTTTTTCGTGAGGTC+GGG | + | chr3.2:20083305-20083324 | None:intergenic | 35.0% |
| ! | ATTTCTGGATTTGGATTGTC+TGG | + | chr3.2:20082916-20082935 | None:intergenic | 35.0% |
| ! | CTCTCACATCTTAGAGTTTT+CGG | - | chr3.2:20084160-20084179 | MS.gene60478:intron | 35.0% |
| ! | CTTTTATCGATGATCACTCT+AGG | - | chr3.2:20083741-20083760 | MS.gene60478:intron | 35.0% |
| ! | GATTAAGTTTTTCGTGAGGT+CGG | + | chr3.2:20083306-20083325 | None:intergenic | 35.0% |
| ! | TAAGTTGAATGGGTCTGTAT+GGG | - | chr3.2:20083256-20083275 | MS.gene60478:intron | 35.0% |
| ! | TCTGGTATTTTATGCTCCAA+TGG | + | chr3.2:20084112-20084131 | None:intergenic | 35.0% |
| ! | TTTCTGAGAATCCTTCTAGT+TGG | + | chr3.2:20084993-20085012 | None:intergenic | 35.0% |
| !! | AAGAAGTTTTGCTATGAGCA+CGG | - | chr3.2:20083908-20083927 | MS.gene60478:CDS | 35.0% |
| !! | AAGCGGTTAAATGGATTTTG+AGG | - | chr3.2:20085616-20085635 | MS.gene60478:CDS | 35.0% |
| !! | ATTTGATGATGTTCGTGATC+TGG | - | chr3.2:20082773-20082792 | MS.gene60478:intron | 35.0% |
| !! | GTTGATGATATGTTAGTAGC+AGG | - | chr3.2:20085195-20085214 | MS.gene60478:intron | 35.0% |
| !! | TTAAGTTGAATGGGTCTGTA+TGG | - | chr3.2:20083255-20083274 | MS.gene60478:intron | 35.0% |
| !!! | TGGATTTTGAGGTATCTAAG+AGG | - | chr3.2:20085627-20085646 | MS.gene60478:CDS | 35.0% |
| !!! | TTTTGTTTTCATCATCCCAG+AGG | + | chr3.2:20084291-20084310 | None:intergenic | 35.0% |
| AAAAAGCTCAGAACCGACAA+TGG | - | chr3.2:20083860-20083879 | MS.gene60478:CDS | 40.0% | |
| AAACTTTACCAAGGTTACCG+GGG | + | chr3.2:20083184-20083203 | None:intergenic | 40.0% | |
| AAAGGATTCCAGCAGAAAGA+AGG | - | chr3.2:20084814-20084833 | MS.gene60478:CDS | 40.0% | |
| AACAGAGTTAGGATTCATGC+AGG | - | chr3.2:20085890-20085909 | MS.gene60478:CDS | 40.0% | |
| AACTTCATATACCACTGCCT+TGG | + | chr3.2:20085075-20085094 | None:intergenic | 40.0% | |
| AAGTTGTGCTCAACTTCAGT+TGG | - | chr3.2:20086116-20086135 | MS.gene60478:CDS | 40.0% | |
| AATCGATGAAGGATGATGAG+TGG | - | chr3.2:20082388-20082407 | MS.gene60478:intron | 40.0% | |
| ACTCGAAATCTATCGAGTGT+TGG | - | chr3.2:20082952-20082971 | MS.gene60478:intron | 40.0% | |
| AGAATGGAAAGAATTGTGCC+AGG | - | chr3.2:20083935-20083954 | MS.gene60478:CDS | 40.0% | |
| AGAGGAAGAAATTCAACCAG+AGG | - | chr3.2:20082867-20082886 | MS.gene60478:intron | 40.0% | |
| AGCAGGTTTATGTCAAATCC+AGG | - | chr3.2:20085579-20085598 | MS.gene60478:CDS | 40.0% | |
| AGCTCAAGTTTCTCCTTCTT+TGG | + | chr3.2:20083656-20083675 | None:intergenic | 40.0% | |
| AGGCTTACCAAAGAACTTCT+GGG | - | chr3.2:20084036-20084055 | MS.gene60478:intron | 40.0% | |
| AGTCAATTCCTTCTTTCTGC+TGG | + | chr3.2:20084825-20084844 | None:intergenic | 40.0% | |
| ATTCTGCCAATTCCTCTGAT+TGG | + | chr3.2:20084459-20084478 | None:intergenic | 40.0% | |
| CAAATCCAGGTAAAGCTCAT+TGG | - | chr3.2:20085592-20085611 | MS.gene60478:CDS | 40.0% | |
| CAAATGGGTGTATCGAGTAA+AGG | - | chr3.2:20084747-20084766 | MS.gene60478:intron | 40.0% | |
| CATTCGAGAACAAAGCACAT+AGG | - | chr3.2:20085975-20085994 | MS.gene60478:CDS | 40.0% | |
| CGCAGATATGTTAACAAAGG+TGG | - | chr3.2:20086076-20086095 | MS.gene60478:CDS | 40.0% | |
| CTCAAGTTTCTCCTTCTTTG+GGG | + | chr3.2:20083654-20083673 | None:intergenic | 40.0% | |
| CTCAGCTACACCATTATGTT+GGG | + | chr3.2:20083966-20083985 | None:intergenic | 40.0% | |
| CTCCAGTTCCTGAATTAAGA+AGG | - | chr3.2:20084518-20084537 | MS.gene60478:intron | 40.0% | |
| CTCTGTATGCAATACTGAAG+AGG | + | chr3.2:20082844-20082863 | None:intergenic | 40.0% | |
| CTGAGAACTACGATGATTTC+TGG | + | chr3.2:20082931-20082950 | None:intergenic | 40.0% | |
| CTTAATTCAGGAACTGGAGT+AGG | + | chr3.2:20084517-20084536 | None:intergenic | 40.0% | |
| CTTCATCAGATCTCTTCTTG+AGG | - | chr3.2:20086010-20086029 | MS.gene60478:CDS | 40.0% | |
| CTTCCAATTGCTGAAGCATA+TGG | + | chr3.2:20085501-20085520 | None:intergenic | 40.0% | |
| CTTGAAGAAGCAACAATGGT+CGG | + | chr3.2:20085139-20085158 | None:intergenic | 40.0% | |
| CTTGTTCACTCTGATGTTTG+GGG | - | chr3.2:20083674-20083693 | MS.gene60478:intron | 40.0% | |
| CTTTGATCTCCAATCAGACA+TGG | - | chr3.2:20084683-20084702 | MS.gene60478:intron | 40.0% | |
| GAACTAGCTAAGTTACCCAA+GGG | - | chr3.2:20084706-20084725 | MS.gene60478:intron | 40.0% | |
| GACCTTCTTAATTCAGGAAC+TGG | + | chr3.2:20084523-20084542 | None:intergenic | 40.0% | |
| GAGGTGATTGTTCTTGAGAT+AGG | + | chr3.2:20085443-20085462 | None:intergenic | 40.0% | |
| GCTCAAGTTTCTCCTTCTTT+GGG | + | chr3.2:20083655-20083674 | None:intergenic | 40.0% | |
| GCTTGTTCACTCTGATGTTT+GGG | - | chr3.2:20083673-20083692 | MS.gene60478:intron | 40.0% | |
| GGAGCATAAAATACCAGAAG+AGG | - | chr3.2:20084114-20084133 | MS.gene60478:intron | 40.0% | |
| GGAGGAAGAAAAAGAACTCA+TGG | - | chr3.2:20085467-20085486 | MS.gene60478:CDS | 40.0% | |
| GGTTATGGTGAAGATGAGTT+TGG | - | chr3.2:20084259-20084278 | MS.gene60478:intron | 40.0% | |
| GTATTGCATACAGAGTCAAG+AGG | - | chr3.2:20082849-20082868 | MS.gene60478:intron | 40.0% | |
| GTGAAGACTGCATTTCTTCA+TGG | - | chr3.2:20084940-20084959 | MS.gene60478:CDS | 40.0% | |
| GTGTTGGAATTGTGGAAAGA+CGG | - | chr3.2:20082968-20082987 | MS.gene60478:intron | 40.0% | |
| GTTTGAAAGCTTCATGCACA+AGG | - | chr3.2:20085092-20085111 | MS.gene60478:intron | 40.0% | |
| TAAGTTACCCAAGGGAAAGA+AGG | - | chr3.2:20084714-20084733 | MS.gene60478:intron | 40.0% | |
| TAGGCCATATGAGTGAAAAG+GGG | - | chr3.2:20083510-20083529 | MS.gene60478:intron | 40.0% | |
| TATGAGTGAAAAGGGGATGA+AGG | - | chr3.2:20083517-20083536 | MS.gene60478:intron | 40.0% | |
| TCAAGAACAATCACCTCAGA+CGG | - | chr3.2:20085446-20085465 | MS.gene60478:CDS | 40.0% | |
| TCAGCTACACCATTATGTTG+GGG | + | chr3.2:20083965-20083984 | None:intergenic | 40.0% | |
| TCAGCTTACTTAATCAACCG+AGG | - | chr3.2:20084076-20084095 | MS.gene60478:intron | 40.0% | |
| TCCCGCAGATATGTTAACAA+AGG | - | chr3.2:20086073-20086092 | MS.gene60478:CDS | 40.0% | |
| TGAAGTTCCTTCTTTCCCTT+GGG | + | chr3.2:20084724-20084743 | None:intergenic | 40.0% | |
| TGACATGAAGGATTTAGGTC+AGG | - | chr3.2:20085269-20085288 | MS.gene60478:intron | 40.0% | |
| TGGAAGTTTGATGTACGCAA+TGG | - | chr3.2:20085515-20085534 | MS.gene60478:CDS | 40.0% | |
| TGGTGAAGCTCAATACTATC+AGG | - | chr3.2:20084866-20084885 | MS.gene60478:CDS | 40.0% | |
| TGTATCTCTTAGAGCCATCA+TGG | + | chr3.2:20084777-20084796 | None:intergenic | 40.0% | |
| TGTTGGAATTGTGGAAAGAC+GGG | - | chr3.2:20082969-20082988 | MS.gene60478:intron | 40.0% | |
| TTCTGCCAATTCCTCTGATT+GGG | + | chr3.2:20084458-20084477 | None:intergenic | 40.0% | |
| TTTACACTTCGGATGACAGA+AGG | - | chr3.2:20082576-20082595 | MS.gene60478:intron | 40.0% | |
| TTTCAAGAGATGGAAAGCCA+TGG | - | chr3.2:20083811-20083830 | MS.gene60478:CDS | 40.0% | |
| ! | AAGTGCACTTTCATCGGTTA+TGG | - | chr3.2:20084244-20084263 | MS.gene60478:intron | 40.0% |
| ! | ACTTGTCTCATTTTCCACCA+TGG | + | chr3.2:20083831-20083850 | None:intergenic | 40.0% |
| ! | AGCTTGTTCACTCTGATGTT+TGG | - | chr3.2:20083672-20083691 | MS.gene60478:intron | 40.0% |
| ! | ATAGTATTGAGCTTCACCAC+TGG | + | chr3.2:20084865-20084884 | None:intergenic | 40.0% |
| ! | ATGATCACTCTAGGAAGGTA+TGG | - | chr3.2:20083750-20083769 | MS.gene60478:intron | 40.0% |
| ! | CGGAGATTAAGTTTTTCGTG+AGG | + | chr3.2:20083310-20083329 | None:intergenic | 40.0% |
| ! | CTCAAGATAGAGATTTTCGC+TGG | + | chr3.2:20084911-20084930 | None:intergenic | 40.0% |
| ! | GAAAGTGCACTTCTTGGATT+TGG | + | chr3.2:20084236-20084255 | None:intergenic | 40.0% |
| ! | GATATGTTCTTTGGAGAGCA+AGG | - | chr3.2:20083085-20083104 | MS.gene60478:intron | 40.0% |
| ! | TATCGATGATCACTCTAGGA+AGG | - | chr3.2:20083745-20083764 | MS.gene60478:intron | 40.0% |
| ! | TCATCCCCTTTTCACTCATA+TGG | + | chr3.2:20083517-20083536 | None:intergenic | 40.0% |
| ! | TCCAAGAAGTGCACTTTCAT+CGG | - | chr3.2:20084238-20084257 | MS.gene60478:intron | 40.0% |
| ! | TGACGCGTTGATATGTTCTT+TGG | - | chr3.2:20083076-20083095 | MS.gene60478:intron | 40.0% |
| ! | TGATCACTCTAGGAAGGTAT+GGG | - | chr3.2:20083751-20083770 | MS.gene60478:intron | 40.0% |
| ! | TGGTATCGAATTTGACGATG+AGG | - | chr3.2:20082659-20082678 | MS.gene60478:intron | 40.0% |
| ! | TTTCATCTTTTTGCTTCCCG+AGG | + | chr3.2:20082754-20082773 | None:intergenic | 40.0% |
| !! | AGAAGTTTTGCTATGAGCAC+GGG | - | chr3.2:20083909-20083928 | MS.gene60478:CDS | 40.0% |
| !! | TCATCATCCTTCATCGATTC+TGG | + | chr3.2:20082387-20082406 | None:intergenic | 40.0% |
| !! | TCTATCGAGTGTTGGAATTG+TGG | - | chr3.2:20082960-20082979 | MS.gene60478:intron | 40.0% |
| !! | TCTGGTTTCTTTTCTGTGAG+AGG | + | chr3.2:20082369-20082388 | None:intergenic | 40.0% |
| AAATCTTCCAGTCATCACCG+TGG | + | chr3.2:20083370-20083389 | None:intergenic | 45.0% | |
| AAGAGCCTTCATAAGACCAG+CGG | + | chr3.2:20082499-20082518 | None:intergenic | 45.0% | |
| AAGTGGAAGAACCCCAAAGA+AGG | - | chr3.2:20083640-20083659 | MS.gene60478:intron | 45.0% | |
| AATGCTTCCCACCAATGGAT+GGG | + | chr3.2:20083712-20083731 | None:intergenic | 45.0% | |
| AATTATGTCCCCGGTAACCT+TGG | - | chr3.2:20083173-20083192 | MS.gene60478:intron | 45.0% | |
| ACAGTAGCACTCCAACTATC+TGG | + | chr3.2:20082714-20082733 | None:intergenic | 45.0% | |
| AGAGTCAGCTTTCAGACAAG+TGG | - | chr3.2:20083623-20083642 | MS.gene60478:intron | 45.0% | |
| AGATGAGATTCCCCAATCAG+AGG | - | chr3.2:20084444-20084463 | MS.gene60478:intron | 45.0% | |
| AGCACTCCAACTATCTGGTA+GGG | + | chr3.2:20082709-20082728 | None:intergenic | 45.0% | |
| AGCTAGTTCCCATGTCTGAT+TGG | + | chr3.2:20084695-20084714 | None:intergenic | 45.0% | |
| AGGTAAAGCTCATTGGGAAG+CGG | - | chr3.2:20085599-20085618 | MS.gene60478:CDS | 45.0% | |
| ATGCAGTGGGAGTTATTAGC+AGG | - | chr3.2:20085562-20085581 | MS.gene60478:CDS | 45.0% | |
| ATGGGTGTATCGAGTAAAGG+AGG | - | chr3.2:20084750-20084769 | MS.gene60478:intron | 45.0% | |
| CAAGTGCTTGTCTATCGAGA+AGG | + | chr3.2:20082416-20082435 | None:intergenic | 45.0% | |
| CACCACTGGAGCAAAAATCT+CGG | + | chr3.2:20084851-20084870 | None:intergenic | 45.0% | |
| CAGATCTCTTCTTGAGGATG+AGG | - | chr3.2:20086016-20086035 | MS.gene60478:CDS | 45.0% | |
| CAGGCTTACCAAAGAACTTC+TGG | - | chr3.2:20084035-20084054 | MS.gene60478:intron | 45.0% | |
| CGAGCCTGTTTATGTAGAGA+TGG | - | chr3.2:20084399-20084418 | MS.gene60478:intron | 45.0% | |
| CTCATTGGGAAGCGGTTAAA+TGG | - | chr3.2:20085607-20085626 | MS.gene60478:CDS | 45.0% | |
| CTTAATCAACCGAGGTCCAT+CGG | - | chr3.2:20084084-20084103 | MS.gene60478:intron | 45.0% | |
| CTTCTCGATAGACAAGCACT+TGG | - | chr3.2:20082414-20082433 | MS.gene60478:intron | 45.0% | |
| GAAAGCTTCATGCACAAGGA+AGG | - | chr3.2:20085096-20085115 | MS.gene60478:intron | 45.0% | |
| GAAGTAATGCTTCCCACCAA+TGG | + | chr3.2:20083717-20083736 | None:intergenic | 45.0% | |
| GAATCAAGAGGCGAAAGATG+AGG | - | chr3.2:20083025-20083044 | MS.gene60478:intron | 45.0% | |
| GAATCCTTTGACCACTAGTC+GGG | + | chr3.2:20084803-20084822 | None:intergenic | 45.0% | |
| GATTCCCCAATCAGAGGAAT+TGG | - | chr3.2:20084450-20084469 | MS.gene60478:intron | 45.0% | |
| GATTGGGGAATCTCATCTGT+GGG | + | chr3.2:20084442-20084461 | None:intergenic | 45.0% | |
| GCTCAGCTACACCATTATGT+TGG | + | chr3.2:20083967-20083986 | None:intergenic | 45.0% | |
| GGAAAGAGAATATGGTGTGC+AGG | - | chr3.2:20085016-20085035 | MS.gene60478:CDS | 45.0% | |
| GGAACTAGCTAAGTTACCCA+AGG | - | chr3.2:20084705-20084724 | MS.gene60478:intron | 45.0% | |
| GGAATCCTTTGACCACTAGT+CGG | + | chr3.2:20084804-20084823 | None:intergenic | 45.0% | |
| GGTACTCTTTACAAGACAGC+TGG | - | chr3.2:20083428-20083447 | MS.gene60478:intron | 45.0% | |
| GTAGAGATGGATGATGTTCC+AGG | - | chr3.2:20084412-20084431 | MS.gene60478:intron | 45.0% | |
| GTGAAGTTCCTTCTTTCCCT+TGG | + | chr3.2:20084725-20084744 | None:intergenic | 45.0% | |
| TAATGCTTCCCACCAATGGA+TGG | + | chr3.2:20083713-20083732 | None:intergenic | 45.0% | |
| TACGTAGATGCAGACTTTGC+TGG | - | chr3.2:20085702-20085721 | MS.gene60478:CDS | 45.0% | |
| TACTCAGTGAAGAGATCCGA+CGG | - | chr3.2:20082796-20082815 | MS.gene60478:intron | 45.0% | |
| TAGCACTCCAACTATCTGGT+AGG | + | chr3.2:20082710-20082729 | None:intergenic | 45.0% | |
| TAGTCAGAGTGCGATACATC+TGG | - | chr3.2:20085935-20085954 | MS.gene60478:CDS | 45.0% | |
| TCGCCTCTTGATTCTTTGCT+GGG | + | chr3.2:20083019-20083038 | None:intergenic | 45.0% | |
| TCTGCCAATTCCTCTGATTG+GGG | + | chr3.2:20084457-20084476 | None:intergenic | 45.0% | |
| TCTTGTAAGGTTGTGGGCAA+AGG | - | chr3.2:20083221-20083240 | MS.gene60478:intron | 45.0% | |
| TGAGGCGGTTGTTTACACTT+CGG | - | chr3.2:20082565-20082584 | MS.gene60478:intron | 45.0% | |
| TGATGAAGCATGTCAGACCA+CGG | - | chr3.2:20084618-20084637 | MS.gene60478:intron | 45.0% | |
| TGATTGGGGAATCTCATCTG+TGG | + | chr3.2:20084443-20084462 | None:intergenic | 45.0% | |
| TGCTAATAACTCCCACTGCA+TGG | + | chr3.2:20085563-20085582 | None:intergenic | 45.0% | |
| TGTCTTCCCTACCAGATAGT+TGG | - | chr3.2:20082700-20082719 | MS.gene60478:intron | 45.0% | |
| TTCGCCTCTTGATTCTTTGC+TGG | + | chr3.2:20083020-20083039 | None:intergenic | 45.0% | |
| TTTACCACGTCCATTTCCTC+TGG | + | chr3.2:20082886-20082905 | None:intergenic | 45.0% | |
| TTTCCACTCCATACCTCTTC+TGG | + | chr3.2:20084130-20084149 | None:intergenic | 45.0% | |
| ! | ACCGATGAAAGTGCACTTCT+TGG | + | chr3.2:20084242-20084261 | None:intergenic | 45.0% |
| ! | AGAGGTATGGAGTGGAAAAG+AGG | - | chr3.2:20084132-20084151 | MS.gene60478:intron | 45.0% |
| ! | AGGCGAAAATGACTTGCCAA+CGG | + | chr3.2:20085423-20085442 | None:intergenic | 45.0% |
| ! | ATACCAGAAGAGGTATGGAG+TGG | - | chr3.2:20084124-20084143 | MS.gene60478:intron | 45.0% |
| ! | GATCACCGAAGAAGTACAAC+TGG | - | chr3.2:20085732-20085751 | MS.gene60478:CDS | 45.0% |
| ! | TCTTTTTCTTCCTCCGTCTG+AGG | + | chr3.2:20085462-20085481 | None:intergenic | 45.0% |
| ! | TGTTTTCATCATCCCAGAGG+CGG | + | chr3.2:20084288-20084307 | None:intergenic | 45.0% |
| ! | TTGGTACTGGAGCAGTTAGT+TGG | - | chr3.2:20085769-20085788 | MS.gene60478:CDS | 45.0% |
| !! | TGTCGCTTTATCCACTACAG+AGG | - | chr3.2:20085812-20085831 | MS.gene60478:CDS | 45.0% |
| AAAGCCCGACTAGTGGTCAA+AGG | - | chr3.2:20084796-20084815 | MS.gene60478:CDS | 50.0% | |
| AACACAACCACCAACGACTC+AGG | - | chr3.2:20084370-20084389 | MS.gene60478:intron | 50.0% | |
| AAGCTCAGAACCGACAATGG+TGG | - | chr3.2:20083863-20083882 | MS.gene60478:CDS | 50.0% | |
| AAGTTCGATGGTGCGGACTT+TGG | - | chr3.2:20082291-20082310 | MS.gene60478:CDS | 50.0% | |
| AATGGTCGGCATTGCACTTC+TGG | + | chr3.2:20085125-20085144 | None:intergenic | 50.0% | |
| ACAACTGTCCCATCCATTGG+TGG | - | chr3.2:20083701-20083720 | MS.gene60478:intron | 50.0% | |
| ACTCTTTCTACCGCGAGCTA+TGG | + | chr3.2:20083408-20083427 | None:intergenic | 50.0% | |
| AGAACAATCACCTCAGACGG+AGG | - | chr3.2:20085449-20085468 | MS.gene60478:CDS | 50.0% | |
| AGACCACGGATGCTAGTAAG+TGG | - | chr3.2:20084632-20084651 | MS.gene60478:intron | 50.0% | |
| AGAGTGCGATACATCTGGCA+AGG | - | chr3.2:20085940-20085959 | MS.gene60478:CDS | 50.0% | |
| ATAGCTCGCGGTAGAAAGAG+TGG | - | chr3.2:20083407-20083426 | MS.gene60478:intron | 50.0% | |
| ATCTCATCTGTGGGACTTCC+TGG | + | chr3.2:20084433-20084452 | None:intergenic | 50.0% | |
| ATGGCCTGAAACAAGCTCCA+AGG | - | chr3.2:20085055-20085074 | MS.gene60478:CDS | 50.0% | |
| ATTCACCCAACTCTCTCCGT+CGG | + | chr3.2:20082815-20082834 | None:intergenic | 50.0% | |
| CAAATCGGTTAGCACACCGT+TGG | - | chr3.2:20085404-20085423 | MS.gene60478:CDS | 50.0% | |
| CAACATGGGCGATGCCAAAT+CGG | - | chr3.2:20085389-20085408 | MS.gene60478:CDS | 50.0% | |
| CAACGGTGTGCTAACCGATT+TGG | + | chr3.2:20085406-20085425 | None:intergenic | 50.0% | |
| CAACTGTCCCATCCATTGGT+GGG | - | chr3.2:20083702-20083721 | MS.gene60478:intron | 50.0% | |
| CAAGAGATGGAAAGCCATGG+TGG | - | chr3.2:20083814-20083833 | MS.gene60478:CDS | 50.0% | |
| CCAAACATTGGCCATGCAGT+GGG | - | chr3.2:20085549-20085568 | MS.gene60478:CDS | 50.0% | |
| CCAACAACTGTCCCATCCAT+TGG | - | chr3.2:20083698-20083717 | MS.gene60478:intron | 50.0% | |
| CCAATGGATGGGACAGTTGT+TGG | + | chr3.2:20083701-20083720 | None:intergenic | 50.0% | |
| CGAGTAAAGGAGGACCATGA+TGG | - | chr3.2:20084760-20084779 | MS.gene60478:intron | 50.0% | |
| CTATGAGCACGGGATCAGAA+TGG | - | chr3.2:20083919-20083938 | MS.gene60478:CDS | 50.0% | |
| CTTAATCTCCGTAGGCCAGT+TGG | - | chr3.2:20083319-20083338 | MS.gene60478:intron | 50.0% | |
| GACCACGGATGCTAGTAAGT+GGG | - | chr3.2:20084633-20084652 | MS.gene60478:intron | 50.0% | |
| GAGATACAAAGCCCGACTAG+TGG | - | chr3.2:20084789-20084808 | MS.gene60478:CDS | 50.0% | |
| GAGTCTTGGGTGTTAGACTC+TGG | - | chr3.2:20083110-20083129 | MS.gene60478:intron | 50.0% | |
| GCAAAAGAGAAAACCACCGC+TGG | - | chr3.2:20082480-20082499 | MS.gene60478:intron | 50.0% | |
| GCTCCCAGCAAAGAATCAAG+AGG | - | chr3.2:20083013-20083032 | MS.gene60478:intron | 50.0% | |
| GCTTCCCAATGAGCTTTACC+TGG | + | chr3.2:20085600-20085619 | None:intergenic | 50.0% | |
| GCTTCTGCCCAGAAGTTCTT+TGG | + | chr3.2:20084046-20084065 | None:intergenic | 50.0% | |
| GGAGAGCAAGGAAGAGTCTT+GGG | - | chr3.2:20083097-20083116 | MS.gene60478:intron | 50.0% | |
| GGCTACACAACAGTCTTCCA+CGG | - | chr3.2:20083350-20083369 | MS.gene60478:intron | 50.0% | |
| GTCTGTACGAGGCCAAACAT+TGG | - | chr3.2:20085537-20085556 | MS.gene60478:CDS | 50.0% | |
| TCAACCAGAGGAAATGGACG+TGG | - | chr3.2:20082879-20082898 | MS.gene60478:intron | 50.0% | |
| TGAAACAAGCTCCAAGGCAG+TGG | - | chr3.2:20085061-20085080 | MS.gene60478:intron | 50.0% | |
| TGCTACATACGCCTCTGTAG+TGG | + | chr3.2:20085826-20085845 | None:intergenic | 50.0% | |
| TGGAGAGCAAGGAAGAGTCT+TGG | - | chr3.2:20083096-20083115 | MS.gene60478:intron | 50.0% | |
| TGTACGCAATGGTCTGTACG+AGG | - | chr3.2:20085526-20085545 | MS.gene60478:CDS | 50.0% | |
| ! | AATGTTGCTTCCACCTCAGG+AGG | - | chr3.2:20083050-20083069 | MS.gene60478:intron | 50.0% |
| ! | ACTGCCTTGGAGCTTGTTTC+AGG | + | chr3.2:20085062-20085081 | None:intergenic | 50.0% |
| ! | CACCGAGATTTTTGCTCCAG+TGG | - | chr3.2:20084846-20084865 | MS.gene60478:CDS | 50.0% |
| ! | GCAAATGTTGCTTCCACCTC+AGG | - | chr3.2:20083047-20083066 | MS.gene60478:intron | 50.0% |
| ! | TTATGCTCCAATGGCACCGA+TGG | + | chr3.2:20084103-20084122 | None:intergenic | 50.0% |
| !! | AACCACCGCTGGTCTTATGA+AGG | - | chr3.2:20082491-20082510 | MS.gene60478:intron | 50.0% |
| !!! | ATGGTGCGGACTTTGGCTTT+TGG | - | chr3.2:20082298-20082317 | MS.gene60478:CDS | 50.0% |
| ACAGCTGTGAGTAGCTCCTC+GGG | - | chr3.2:20082735-20082754 | MS.gene60478:intron | 55.0% | |
| AGAAGCTTGCGTGTGCAGTC+AGG | - | chr3.2:20084016-20084035 | MS.gene60478:intron | 55.0% | |
| AGAGATCCGACGGAGAGAGT+TGG | - | chr3.2:20082806-20082825 | MS.gene60478:intron | 55.0% | |
| AGCCTTCATAAGACCAGCGG+TGG | + | chr3.2:20082496-20082515 | None:intergenic | 55.0% | |
| ATGAGTTTGGCTACCGCCTC+TGG | - | chr3.2:20084272-20084291 | MS.gene60478:intron | 55.0% | |
| CACAGCTGTGAGTAGCTCCT+CGG | - | chr3.2:20082734-20082753 | MS.gene60478:intron | 55.0% | |
| CAGTCTTCCACGGTGATGAC+TGG | - | chr3.2:20083360-20083379 | MS.gene60478:intron | 55.0% | |
| CCAGGCACTCCCCAACATAA+TGG | - | chr3.2:20083953-20083972 | MS.gene60478:CDS | 55.0% | |
| CCCACTGCATGGCCAATGTT+TGG | + | chr3.2:20085552-20085571 | None:intergenic | 55.0% | |
| CTCCCACTTACTAGCATCCG+TGG | + | chr3.2:20084638-20084657 | None:intergenic | 55.0% | |
| CTCGCTCAATCCTGAGTCGT+TGG | + | chr3.2:20084383-20084402 | None:intergenic | 55.0% | |
| GAGATCCGACGGAGAGAGTT+GGG | - | chr3.2:20082807-20082826 | MS.gene60478:intron | 55.0% | |
| GCCAAACATTGGCCATGCAG+TGG | - | chr3.2:20085548-20085567 | MS.gene60478:CDS | 55.0% | |
| GCTCAATCCTGAGTCGTTGG+TGG | + | chr3.2:20084380-20084399 | None:intergenic | 55.0% | |
| GGAACTGGAGTAGGATGCAC+TGG | + | chr3.2:20084508-20084527 | None:intergenic | 55.0% | |
| GGTGCAATGACCATAGCTCG+CGG | - | chr3.2:20083395-20083414 | MS.gene60478:intron | 55.0% | |
| TGACTGCACACGCAAGCTTC+TGG | + | chr3.2:20084017-20084036 | None:intergenic | 55.0% | |
| TGAGTTTGGCTACCGCCTCT+GGG | - | chr3.2:20084273-20084292 | MS.gene60478:intron | 55.0% | |
| TGTAGCCTTCGTCAGCCAAC+TGG | + | chr3.2:20083337-20083356 | None:intergenic | 55.0% | |
| ! | GATGACAGAAGGCGCATCAG+TGG | - | chr3.2:20082587-20082606 | MS.gene60478:intron | 55.0% |
| ! | GGATGCACTGGTGTGTCAGA+CGG | + | chr3.2:20084496-20084515 | None:intergenic | 55.0% |
| ! | TTCGTCAGCCAACTGGCCTA+CGG | + | chr3.2:20083330-20083349 | None:intergenic | 55.0% |
| !! | CCATTATGTTGGGGAGTGCC+TGG | + | chr3.2:20083956-20083975 | None:intergenic | 55.0% |
| GTAGGCCAGTTGGCTGACGA+AGG | - | chr3.2:20083329-20083348 | MS.gene60478:intron | 60.0% | |
| GTTGCTTCCACCTCAGGAGG+AGG | - | chr3.2:20083053-20083072 | MS.gene60478:intron | 60.0% | |
| !! | CCAATGGCACCGATGGACCT+CGG | + | chr3.2:20084096-20084115 | None:intergenic | 60.0% |
| CAACGCGTCACCTCCTCCTG+AGG | + | chr3.2:20083066-20083085 | None:intergenic | 65.0% | |
| !! | CCGAGGTCCATCGGTGCCAT+TGG | - | chr3.2:20084093-20084112 | MS.gene60478:intron | 65.0% |
| CGCGTCACCTCCTCCTGAGG+TGG | + | chr3.2:20083063-20083082 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 20082258 | 20086151 | 20082258 | ID=MS.gene60478 |
| chr3.2 | mRNA | 20082258 | 20086151 | 20082258 | ID=MS.gene60478.t1;Parent=MS.gene60478 |
| chr3.2 | exon | 20085335 | 20086151 | 20085335 | ID=MS.gene60478.t1.exon1;Parent=MS.gene60478.t1 |
| chr3.2 | CDS | 20085335 | 20086151 | 20085335 | ID=cds.MS.gene60478.t1;Parent=MS.gene60478.t1 |
| chr3.2 | exon | 20084768 | 20085076 | 20084768 | ID=MS.gene60478.t1.exon2;Parent=MS.gene60478.t1 |
| chr3.2 | CDS | 20084768 | 20085076 | 20084768 | ID=cds.MS.gene60478.t1;Parent=MS.gene60478.t1 |
| chr3.2 | exon | 20083763 | 20084017 | 20083763 | ID=MS.gene60478.t1.exon3;Parent=MS.gene60478.t1 |
| chr3.2 | CDS | 20083763 | 20084017 | 20083763 | ID=cds.MS.gene60478.t1;Parent=MS.gene60478.t1 |
| chr3.2 | exon | 20082258 | 20082346 | 20082258 | ID=MS.gene60478.t1.exon4;Parent=MS.gene60478.t1 |
| chr3.2 | CDS | 20082258 | 20082346 | 20082258 | ID=cds.MS.gene60478.t1;Parent=MS.gene60478.t1 |
| Gene Sequence |
| Protein sequence |
