Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60749.t1 | XP_004491431.1 | 70.2 | 171 | 44 | 2 | 9 | 172 | 238 | 408 | 9.00E-50 | 207.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60749.t1 | Q9FLP0 | 66.2 | 154 | 42 | 2 | 21 | 172 | 264 | 409 | 8.9e-46 | 185.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60749.t1 | A0A1S2XM56 | 70.2 | 171 | 44 | 2 | 9 | 172 | 238 | 408 | 6.5e-50 | 207.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053145 | MS.gene60749 | 0.807768 | 4.30E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60749.t1 | MTR_5g093860 | 76.623 | 154 | 26 | 2 | 21 | 172 | 265 | 410 | 1.21e-67 | 222 |
| MS.gene60749.t1 | MTR_8g041400 | 51.145 | 131 | 62 | 1 | 45 | 173 | 280 | 410 | 3.89e-35 | 135 |
| MS.gene60749.t1 | MTR_1g038840 | 53.488 | 129 | 58 | 1 | 46 | 172 | 251 | 379 | 1.99e-34 | 132 |
| MS.gene60749.t1 | MTR_1g038840 | 53.488 | 129 | 58 | 1 | 46 | 172 | 291 | 419 | 2.40e-34 | 133 |
| MS.gene60749.t1 | MTR_7g116890 | 61.321 | 106 | 39 | 1 | 225 | 330 | 159 | 262 | 2.17e-32 | 125 |
| MS.gene60749.t1 | MTR_1g076700 | 46.043 | 139 | 73 | 1 | 36 | 172 | 269 | 407 | 2.39e-31 | 125 |
| MS.gene60749.t1 | MTR_3g085440 | 43.056 | 144 | 74 | 2 | 28 | 163 | 262 | 405 | 6.53e-27 | 110 |
| MS.gene60749.t1 | MTR_3g085440 | 43.056 | 144 | 74 | 2 | 28 | 163 | 262 | 405 | 1.10e-26 | 110 |
| MS.gene60749.t1 | MTR_8g023220 | 45.588 | 136 | 62 | 3 | 40 | 165 | 274 | 407 | 1.11e-26 | 110 |
| MS.gene60749.t1 | MTR_6g061690 | 43.885 | 139 | 73 | 2 | 36 | 172 | 271 | 406 | 5.34e-26 | 109 |
| MS.gene60749.t1 | MTR_7g075220 | 40.146 | 137 | 77 | 2 | 38 | 172 | 581 | 714 | 4.37e-22 | 97.8 |
| MS.gene60749.t1 | MTR_8g028150 | 43.158 | 95 | 47 | 2 | 230 | 324 | 173 | 260 | 2.19e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60749.t1 | AT5G55230 | 66.234 | 154 | 42 | 2 | 21 | 172 | 264 | 409 | 4.04e-60 | 202 |
| MS.gene60749.t1 | AT5G55230 | 66.234 | 154 | 42 | 2 | 21 | 172 | 264 | 409 | 4.04e-60 | 202 |
| MS.gene60749.t1 | AT4G26760 | 74.615 | 130 | 31 | 1 | 45 | 172 | 280 | 409 | 3.37e-56 | 192 |
| MS.gene60749.t1 | AT5G55230 | 55.738 | 183 | 42 | 3 | 21 | 172 | 264 | 438 | 5.36e-54 | 187 |
| MS.gene60749.t1 | AT2G01910 | 44.516 | 155 | 76 | 2 | 20 | 172 | 232 | 378 | 9.89e-33 | 128 |
| MS.gene60749.t1 | AT2G01910 | 44.516 | 155 | 76 | 2 | 20 | 172 | 273 | 419 | 1.51e-32 | 128 |
| MS.gene60749.t1 | AT2G38720 | 51.639 | 122 | 57 | 1 | 54 | 173 | 281 | 402 | 3.18e-31 | 124 |
| MS.gene60749.t1 | AT1G14690 | 46.565 | 131 | 68 | 1 | 44 | 172 | 289 | 419 | 1.35e-29 | 119 |
| MS.gene60749.t1 | AT1G14690 | 46.565 | 131 | 68 | 1 | 44 | 172 | 289 | 419 | 1.35e-29 | 119 |
| MS.gene60749.t1 | AT5G62250 | 44.275 | 131 | 70 | 2 | 45 | 172 | 282 | 412 | 1.33e-27 | 113 |
| MS.gene60749.t1 | AT5G62250 | 44.275 | 131 | 70 | 2 | 45 | 172 | 282 | 412 | 1.33e-27 | 113 |
| MS.gene60749.t1 | AT5G51600 | 43.885 | 139 | 76 | 1 | 36 | 172 | 272 | 410 | 3.45e-27 | 112 |
| MS.gene60749.t1 | AT1G27920 | 41.892 | 148 | 75 | 3 | 20 | 165 | 270 | 408 | 3.42e-26 | 108 |
| MS.gene60749.t1 | AT1G27920 | 40.909 | 154 | 80 | 3 | 20 | 171 | 270 | 414 | 4.80e-26 | 108 |
| MS.gene60749.t1 | AT3G60840 | 37.013 | 154 | 87 | 2 | 21 | 172 | 261 | 406 | 7.63e-22 | 97.1 |
Find 60 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTCTTTGAGTGCCTTAA+TGG | 0.148948 | 1.2:+71473616 | MS.gene60749:CDS |
| TTTAGGATTCATACCTTCTT+AGG | 0.185148 | 1.2:-71470990 | None:intergenic |
| ATCAGAAACTACAATTTCTT+TGG | 0.241222 | 1.2:-71474522 | None:intergenic |
| TTGGCCTAAAGCTTCTTCTT+TGG | 0.263013 | 1.2:-71472570 | None:intergenic |
| TTAACTGTTGCAGAGAGTTT+TGG | 0.285846 | 1.2:+71473849 | MS.gene60749:CDS |
| CATTGAACCAACTGAATTAC+TGG | 0.310358 | 1.2:+71472526 | MS.gene60749:CDS |
| TCAAGGCTTGCTGCATTTAG+AGG | 0.327349 | 1.2:+71471861 | MS.gene60749:CDS |
| ATTAGCAGATCCTGTTACTA+AGG | 0.346276 | 1.2:-71473654 | None:intergenic |
| TGCTCATATAGAAATAGATT+TGG | 0.380851 | 1.2:+71472460 | MS.gene60749:CDS |
| TATTCCTGGTGCACTTGCTC+TGG | 0.380985 | 1.2:+71472247 | MS.gene60749:CDS |
| GTCAATGAAGTCACTATTCC+TGG | 0.394176 | 1.2:+71472233 | MS.gene60749:CDS |
| GGAAAACAACCCTTAGTAAC+AGG | 0.395828 | 1.2:+71473644 | MS.gene60749:CDS |
| TTCTCTACTGTTTACGCAGA+TGG | 0.422746 | 1.2:+71474464 | MS.gene60749:CDS |
| GTTGCCCCTGCTGGTGTCGC+AGG | 0.424600 | 1.2:+71474557 | MS.gene60749:CDS |
| GGCAATACAGCAGAAGGTTG+AGG | 0.426792 | 1.2:-71474676 | None:intergenic |
| TCATCCTGCTTGCTTTAAGT+TGG | 0.434157 | 1.2:-71472388 | None:intergenic |
| AATTGACCTGCGACACCAGC+AGG | 0.437591 | 1.2:-71474563 | None:intergenic |
| TATTGGACAAGTTTGAGAAA+TGG | 0.439573 | 1.2:+71472600 | MS.gene60749:CDS |
| GCTGGCTTGAGGACTATAAT+CGG | 0.444875 | 1.2:+71472645 | MS.gene60749:CDS |
| CTTATCAGAACCTGTTGATA+AGG | 0.450224 | 1.2:+71473818 | MS.gene60749:CDS |
| AAAGCCAAAGAAGAAGCTTT+AGG | 0.457201 | 1.2:+71472566 | MS.gene60749:CDS |
| TATCCACAAGGCACCTAAGA+AGG | 0.467591 | 1.2:+71470977 | MS.gene60749:CDS |
| GACTGGTGCTGCTTATGATC+AGG | 0.481385 | 1.2:+71474072 | MS.gene60749:CDS |
| CAGAAGGTTGAGGGCACTTG+TGG | 0.488431 | 1.2:-71474666 | None:intergenic |
| GAACCTGTTGATAAGGCAAA+AGG | 0.495619 | 1.2:+71473825 | MS.gene60749:CDS |
| TGTAGTTTCTGATAAGATGA+TGG | 0.498334 | 1.2:+71474532 | MS.gene60749:CDS |
| AGGAATGCATTGTTCAAAGC+TGG | 0.510107 | 1.2:+71470459 | None:intergenic |
| TTCAGCGATGACCACCGCGC+TGG | 0.513035 | 1.2:+71474604 | MS.gene60749:CDS |
| AGATCCAGAGCAAGTGCACC+AGG | 0.523988 | 1.2:-71472251 | None:intergenic |
| ACTGTTTACGCAGATGGAGA+AGG | 0.529464 | 1.2:+71474470 | MS.gene60749:CDS |
| GCAATACAGCAGAAGGTTGA+GGG | 0.529581 | 1.2:-71474675 | None:intergenic |
| GCAGCAAGCCTTGACTGATA+AGG | 0.534526 | 1.2:-71471852 | None:intergenic |
| CATGGTAATACAAAGAAGAC+TGG | 0.535833 | 1.2:+71474055 | MS.gene60749:CDS |
| ACTTAAAGCAAGCAGGATGA+AGG | 0.536557 | 1.2:+71472391 | MS.gene60749:CDS |
| TGCTCTGGATCTGATTGAGC+AGG | 0.537227 | 1.2:+71472262 | MS.gene60749:CDS |
| ATGATGGCAGTTGCCCCTGC+TGG | 0.540223 | 1.2:+71474548 | MS.gene60749:CDS |
| GGTGTCGCAGGTCAATTAGT+TGG | 0.542651 | 1.2:+71474569 | MS.gene60749:CDS |
| ACTGAGTCTGTGTCTGATCA+TGG | 0.552055 | 1.2:+71474037 | MS.gene60749:CDS |
| ATACCTTCTTAGGTGCCTTG+TGG | 0.561603 | 1.2:-71470980 | None:intergenic |
| AGAAGGTTGAGGGCACTTGT+GGG | 0.565007 | 1.2:-71474665 | None:intergenic |
| CTGGCTTGAGGACTATAATC+GGG | 0.565872 | 1.2:+71472646 | MS.gene60749:CDS |
| TTAGCAGATCCTGTTACTAA+GGG | 0.565933 | 1.2:-71473653 | None:intergenic |
| TCAGGCTAATCAAACAAAGA+AGG | 0.567202 | 1.2:+71474090 | MS.gene60749:CDS |
| ACAAACCACCTTATCAGTCA+AGG | 0.567759 | 1.2:+71471844 | MS.gene60749:CDS |
| CAGCATGTGAAGAAGAGAGC+TGG | 0.571216 | 1.2:+71472627 | MS.gene60749:CDS |
| TCTAGAGGCAATACAGCAGA+AGG | 0.571235 | 1.2:-71474682 | None:intergenic |
| CTGTTTACGCAGATGGAGAA+GGG | 0.576089 | 1.2:+71474471 | MS.gene60749:CDS |
| TGAAGAAGAGAGCTGGCTTG+AGG | 0.585193 | 1.2:+71472634 | MS.gene60749:CDS |
| TTTGAGTGCCTTAATGGACA+AGG | 0.597250 | 1.2:+71473622 | MS.gene60749:CDS |
| TTGACCAACTTAAAGCAAGC+AGG | 0.598791 | 1.2:+71472384 | MS.gene60749:CDS |
| TTGTCAGCCAGTAATTCAGT+TGG | 0.600517 | 1.2:-71472533 | None:intergenic |
| GCAAGCCTTGACTGATAAGG+TGG | 0.603799 | 1.2:-71471849 | None:intergenic |
| TTGAGTGCCTTAATGGACAA+GGG | 0.612296 | 1.2:+71473623 | MS.gene60749:CDS |
| TGCTGCAAGAGAGAAGATCA+TGG | 0.621986 | 1.2:+71472484 | MS.gene60749:CDS |
| GTCATCGCTGAAGAAACTGC+AGG | 0.623544 | 1.2:-71474593 | None:intergenic |
| ATTGACCTGCGACACCAGCA+GGG | 0.653280 | 1.2:-71474562 | None:intergenic |
| ATTTCTCAGCTCCAGCGCGG+TGG | 0.663610 | 1.2:-71474615 | None:intergenic |
| TTGACCTGCGACACCAGCAG+GGG | 0.669385 | 1.2:-71474561 | None:intergenic |
| GAAGGGAAAACTCATACACA+AGG | 0.687878 | 1.2:+71474488 | MS.gene60749:CDS |
| AGAATTTCTCAGCTCCAGCG+CGG | 0.750273 | 1.2:-71474618 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGATGTAAAAAATAAAT+GGG | + | chr1.2:71470587-71470606 | MS.gene60749:intron | 10.0% |
| !! | TCTAATATCTAATATTAATA+AGG | - | chr1.2:71471041-71471060 | None:intergenic | 10.0% |
| !! | TTAAATCAAAAATGATATAT+TGG | - | chr1.2:71472896-71472915 | None:intergenic | 10.0% |
| !! | AATATGATATATATGGTAAT+GGG | - | chr1.2:71471119-71471138 | None:intergenic | 15.0% |
| !! | ATTAATATAACAGTATTTGA+TGG | - | chr1.2:71473041-71473060 | None:intergenic | 15.0% |
| !! | GAATTGATGTAAAAAATAAA+TGG | + | chr1.2:71470586-71470605 | MS.gene60749:intron | 15.0% |
| !! | TGATAGAATAATTCTATTAT+GGG | + | chr1.2:71471222-71471241 | MS.gene60749:intron | 15.0% |
| !!! | AAATTGTTGTTTGAATATTA+TGG | + | chr1.2:71471453-71471472 | MS.gene60749:intron | 15.0% |
| !!! | AATTGTTGTTTGAATATTAT+GGG | + | chr1.2:71471454-71471473 | MS.gene60749:intron | 15.0% |
| !!! | TTAACAGATTTTCTTAAATA+TGG | + | chr1.2:71473752-71473771 | MS.gene60749:intron | 15.0% |
| !!! | TTATTTTGTTCTTTTTATGA+AGG | + | chr1.2:71472340-71472359 | MS.gene60749:intron | 15.0% |
| !! | AACATTAAGCAATATGATAA+GGG | + | chr1.2:71472008-71472027 | MS.gene60749:intron | 20.0% |
| !! | AATTGAGAAAAATGGATAAA+TGG | - | chr1.2:71473386-71473405 | None:intergenic | 20.0% |
| !! | AATTTGATCATTGCATTAAA+TGG | + | chr1.2:71472856-71472875 | MS.gene60749:intron | 20.0% |
| !! | ATATATGTTGAACTTTATGT+GGG | + | chr1.2:71472159-71472178 | MS.gene60749:intron | 20.0% |
| !! | ATCGTGAAAAAACTAAAATT+AGG | - | chr1.2:71473415-71473434 | None:intergenic | 20.0% |
| !! | ATTATTAATATAAATGCCTC+TGG | + | chr1.2:71473575-71473594 | MS.gene60749:intron | 20.0% |
| !! | ATTCTATCAGAATTACAATA+AGG | - | chr1.2:71471211-71471230 | None:intergenic | 20.0% |
| !! | CAATATGATATATATGGTAA+TGG | - | chr1.2:71471120-71471139 | None:intergenic | 20.0% |
| !! | CTGATAGAATAATTCTATTA+TGG | + | chr1.2:71471221-71471240 | MS.gene60749:intron | 20.0% |
| !! | GTGGAAAATTTACTAAATAA+TGG | + | chr1.2:71471244-71471263 | MS.gene60749:intron | 20.0% |
| !!! | AAATGTTGTCTAAAATGAAT+AGG | - | chr1.2:71470898-71470917 | None:intergenic | 20.0% |
| !!! | AACTGAATTTACAATCATTT+TGG | + | chr1.2:71471611-71471630 | MS.gene60749:intron | 20.0% |
| !!! | AGAATTAACATTGTTTCTTT+TGG | + | chr1.2:71473111-71473130 | MS.gene60749:intron | 20.0% |
| !!! | ATATTTTGAACTGAAGAAAA+TGG | + | chr1.2:71471774-71471793 | MS.gene60749:intron | 20.0% |
| !!! | ATGTAAAAAATAAATGGGTT+GGG | + | chr1.2:71470592-71470611 | MS.gene60749:intron | 20.0% |
| !!! | ATTAACTGTAGTTTGTTAAT+AGG | + | chr1.2:71473726-71473745 | MS.gene60749:intron | 20.0% |
| !!! | ATTTTTCATTATGCATTGTT+TGG | + | chr1.2:71472044-71472063 | MS.gene60749:intron | 20.0% |
| !!! | CATAAGATTTTTATTGCATT+TGG | + | chr1.2:71470785-71470804 | MS.gene60749:intron | 20.0% |
| !!! | TGTTTTCATTGTTTTGAAAT+AGG | + | chr1.2:71473976-71473995 | MS.gene60749:intron | 20.0% |
| !!! | TTATATTTGCTGTTGATATT+AGG | + | chr1.2:71473060-71473079 | MS.gene60749:intron | 20.0% |
| !!! | TTTTTCATTATGCATTGTTT+GGG | + | chr1.2:71472045-71472064 | MS.gene60749:intron | 20.0% |
| ! | AAAAATGGATAAATGGAAAC+TGG | - | chr1.2:71473379-71473398 | None:intergenic | 25.0% |
| ! | AAAATGGATAAATGGAAACT+GGG | - | chr1.2:71473378-71473397 | None:intergenic | 25.0% |
| ! | AACTACTTGTATAATGCATT+AGG | - | chr1.2:71471018-71471037 | None:intergenic | 25.0% |
| ! | AATAAATACAAAACGCTAGA+AGG | - | chr1.2:71471321-71471340 | None:intergenic | 25.0% |
| ! | AATATAACAGTATTTGATGG+TGG | - | chr1.2:71473038-71473057 | None:intergenic | 25.0% |
| ! | AATATATAGCCAATGTAAGA+TGG | - | chr1.2:71471759-71471778 | None:intergenic | 25.0% |
| ! | AATCCAAAAAAGAACACAAA+AGG | - | chr1.2:71471901-71471920 | None:intergenic | 25.0% |
| ! | ACAAAAAGATGCTACATTAT+TGG | + | chr1.2:71473087-71473106 | MS.gene60749:intron | 25.0% |
| ! | ACAAAGGGATTATCTTAAAA+AGG | + | chr1.2:71470812-71470831 | MS.gene60749:intron | 25.0% |
| ! | ACATTAAGCAATATGATAAG+GGG | + | chr1.2:71472009-71472028 | MS.gene60749:intron | 25.0% |
| ! | AGTGCTCAATATGATATATA+TGG | - | chr1.2:71471126-71471145 | None:intergenic | 25.0% |
| ! | ATCAGAAACTACAATTTCTT+TGG | - | chr1.2:71474525-71474544 | None:intergenic | 25.0% |
| ! | ATTGCTAATCCAATTTGTAA+TGG | - | chr1.2:71471288-71471307 | None:intergenic | 25.0% |
| ! | CAAATTGACATAAAACAATG+AGG | - | chr1.2:71473525-71473544 | None:intergenic | 25.0% |
| ! | CAACATTAAGCAATATGATA+AGG | + | chr1.2:71472007-71472026 | MS.gene60749:intron | 25.0% |
| ! | CAAGTCATATGAAATGTATT+TGG | - | chr1.2:71471077-71471096 | None:intergenic | 25.0% |
| ! | CATATATGTTGAACTTTATG+TGG | + | chr1.2:71472158-71472177 | MS.gene60749:intron | 25.0% |
| ! | GACACAATAAAGTAACATTT+AGG | - | chr1.2:71473897-71473916 | None:intergenic | 25.0% |
| ! | GATGTAAAAAATAAATGGGT+TGG | + | chr1.2:71470591-71470610 | MS.gene60749:intron | 25.0% |
| ! | GGACTAATAATTGAGAAAAA+TGG | - | chr1.2:71473394-71473413 | None:intergenic | 25.0% |
| ! | GTATAATGCATTAGGAATTT+AGG | - | chr1.2:71471010-71471029 | None:intergenic | 25.0% |
| ! | TAAAGTTTCATAATCTCTGT+TGG | + | chr1.2:71471358-71471377 | MS.gene60749:intron | 25.0% |
| ! | TAGAATAATTCTATTATGGG+TGG | + | chr1.2:71471225-71471244 | MS.gene60749:intron | 25.0% |
| ! | TGATTTCATTCCATAAATAC+CGG | - | chr1.2:71473012-71473031 | None:intergenic | 25.0% |
| ! | TGCTCATATAGAAATAGATT+TGG | + | chr1.2:71472460-71472479 | MS.gene60749:CDS | 25.0% |
| ! | TGTCTTGAATATCATTATTC+AGG | + | chr1.2:71473785-71473804 | MS.gene60749:intron | 25.0% |
| ! | TTCAAAACAATGAAAACACT+TGG | - | chr1.2:71473974-71473993 | None:intergenic | 25.0% |
| ! | TTTAGGCCAAAAAGATATAT+TGG | + | chr1.2:71472583-71472602 | MS.gene60749:CDS | 25.0% |
| !! | ACAGAAGCTACAAAAATTTT+AGG | - | chr1.2:71473306-71473325 | None:intergenic | 25.0% |
| !! | ACTTGTCCAATATATCTTTT+TGG | - | chr1.2:71472592-71472611 | None:intergenic | 25.0% |
| !! | ATTTTCTTGAAGCAAAAAAC+TGG | - | chr1.2:71472080-71472099 | None:intergenic | 25.0% |
| !! | CAGAAGCTACAAAAATTTTA+GGG | - | chr1.2:71473305-71473324 | None:intergenic | 25.0% |
| !! | GTGATAGAATTAAATGCTTT+TGG | + | chr1.2:71471400-71471419 | MS.gene60749:intron | 25.0% |
| !! | TATTTATTGTTGTTGCAACT+TGG | + | chr1.2:71471333-71471352 | MS.gene60749:intron | 25.0% |
| !! | TTTCCTTTTGTGTTCTTTTT+TGG | + | chr1.2:71471895-71471914 | MS.gene60749:intron | 25.0% |
| !! | TTTTCTTGAAGCAAAAAACT+GGG | - | chr1.2:71472079-71472098 | None:intergenic | 25.0% |
| !!! | ATTTGTTTTAGTATGAACAC+TGG | - | chr1.2:71474645-71474664 | None:intergenic | 25.0% |
| !!! | CTCATTGTTTTATGTCAATT+TGG | + | chr1.2:71473523-71473542 | MS.gene60749:intron | 25.0% |
| !!! | TTTGTGTTCTTTTTTGGATT+TGG | + | chr1.2:71471901-71471920 | MS.gene60749:intron | 25.0% |
| !!! | TTTTTTGCTTCAAGAAAATG+CGG | + | chr1.2:71472081-71472100 | MS.gene60749:intron | 25.0% |
| AAACTTATTCCCAACTGATT+AGG | - | chr1.2:71470738-71470757 | None:intergenic | 30.0% | |
| AACACTTGGAGTCAATTTAA+TGG | - | chr1.2:71473960-71473979 | None:intergenic | 30.0% | |
| AACATGTATAATGCAAGCAT+AGG | + | chr1.2:71472953-71472972 | MS.gene60749:intron | 30.0% | |
| AATTGCAGTAAAGCTAAACT+TGG | - | chr1.2:71472840-71472859 | None:intergenic | 30.0% | |
| ACACAAAGAAAAAATGCACA+AGG | - | chr1.2:71472685-71472704 | None:intergenic | 30.0% | |
| ATATCATTGTTGCTCAGTAA+GGG | + | chr1.2:71474277-71474296 | MS.gene60749:intron | 30.0% | |
| ATCTGTTTACAAAATGCAGT+AGG | - | chr1.2:71471173-71471192 | None:intergenic | 30.0% | |
| ATGAACAATAGAGTTGTCAT+GGG | + | chr1.2:71474179-71474198 | MS.gene60749:intron | 30.0% | |
| ATTTAAGAAAACGTGAGATG+CGG | + | chr1.2:71473462-71473481 | MS.gene60749:intron | 30.0% | |
| CACAAAGAAAAAATGCACAA+GGG | - | chr1.2:71472684-71472703 | None:intergenic | 30.0% | |
| CATGTCATATTCATCTAACA+TGG | - | chr1.2:71473235-71473254 | None:intergenic | 30.0% | |
| CATTAAGCAATATGATAAGG+GGG | + | chr1.2:71472010-71472029 | MS.gene60749:intron | 30.0% | |
| CTTGTCTTCACTACAAAAAA+AGG | - | chr1.2:71471675-71471694 | None:intergenic | 30.0% | |
| GATAAATTGCCTAATCAGTT+GGG | + | chr1.2:71470726-71470745 | MS.gene60749:intron | 30.0% | |
| GATTGTGCTAGAATAAACAT+GGG | + | chr1.2:71471942-71471961 | MS.gene60749:intron | 30.0% | |
| GATTTCATTCCATAAATACC+GGG | - | chr1.2:71473011-71473030 | None:intergenic | 30.0% | |
| TAGAGTTCTCCATTACAAAT+TGG | + | chr1.2:71471276-71471295 | MS.gene60749:intron | 30.0% | |
| TAGATGAATATGACATGCTT+AGG | + | chr1.2:71473238-71473257 | MS.gene60749:intron | 30.0% | |
| TATATCATTGTTGCTCAGTA+AGG | + | chr1.2:71474276-71474295 | MS.gene60749:intron | 30.0% | |
| TATGCAGGTTATGTAGTAAA+AGG | + | chr1.2:71471973-71471992 | MS.gene60749:intron | 30.0% | |
| TATTGGACAAGTTTGAGAAA+TGG | + | chr1.2:71472600-71472619 | MS.gene60749:CDS | 30.0% | |
| TCAAACAACAATTTGCATCA+GGG | - | chr1.2:71471447-71471466 | None:intergenic | 30.0% | |
| TCATATGAAATGTATTTGGC+AGG | - | chr1.2:71471073-71471092 | None:intergenic | 30.0% | |
| TCATCTAACATGGCAATAAT+AGG | - | chr1.2:71473225-71473244 | None:intergenic | 30.0% | |
| TGATAAATTGCCTAATCAGT+TGG | + | chr1.2:71470725-71470744 | MS.gene60749:intron | 30.0% | |
| TGATTGTGCTAGAATAAACA+TGG | + | chr1.2:71471941-71471960 | MS.gene60749:intron | 30.0% | |
| TGTAGTTTCTGATAAGATGA+TGG | + | chr1.2:71474532-71474551 | MS.gene60749:CDS | 30.0% | |
| TTCAAACAACAATTTGCATC+AGG | - | chr1.2:71471448-71471467 | None:intergenic | 30.0% | |
| ! | AAAGCTAAACTTGGTAATTC+CGG | - | chr1.2:71472831-71472850 | None:intergenic | 30.0% |
| ! | AACTCACATTTGCATTTTTG+CGG | - | chr1.2:71473501-71473520 | None:intergenic | 30.0% |
| ! | AGATATTGCTTAGCTTTCAA+AGG | + | chr1.2:71471528-71471547 | MS.gene60749:intron | 30.0% |
| ! | TGTTGTTTGAATATTATGGG+AGG | + | chr1.2:71471457-71471476 | MS.gene60749:intron | 30.0% |
| ! | TTCCTTTTAATAAGATCCAG+AGG | - | chr1.2:71473594-71473613 | None:intergenic | 30.0% |
| ! | TTTAGGATTCATACCTTCTT+AGG | - | chr1.2:71470993-71471012 | None:intergenic | 30.0% |
| ! | TTTTTCTTTGTGTCCAGTTT+TGG | + | chr1.2:71472692-71472711 | MS.gene60749:intron | 30.0% |
| !! | CCTTCTGAAGTTTAAAAGTT+CGG | + | chr1.2:71472294-71472313 | MS.gene60749:intron | 30.0% |
| !! | CTTCTGAAGTTTAAAAGTTC+GGG | + | chr1.2:71472295-71472314 | MS.gene60749:intron | 30.0% |
| !!! | ATCTGCTAATGTTTTTTCAG+AGG | + | chr1.2:71473667-71473686 | MS.gene60749:CDS | 30.0% |
| !!! | CTTTTTTTGTAGTGAAGACA+AGG | + | chr1.2:71471673-71471692 | MS.gene60749:intron | 30.0% |
| AAAACCAACCAATCATACTG+TGG | + | chr1.2:71471568-71471587 | MS.gene60749:intron | 35.0% | |
| AAAGCCAAAGAAGAAGCTTT+AGG | + | chr1.2:71472566-71472585 | MS.gene60749:CDS | 35.0% | |
| AAATCGATACGGTATGAAGT+CGG | - | chr1.2:71474383-71474402 | None:intergenic | 35.0% | |
| ATAAGACGCCAAAATCGATA+CGG | - | chr1.2:71474394-71474413 | None:intergenic | 35.0% | |
| ATAGTGCCTTACCATATTTC+CGG | + | chr1.2:71472809-71472828 | MS.gene60749:intron | 35.0% | |
| ATTAGCAGATCCTGTTACTA+AGG | - | chr1.2:71473657-71473676 | None:intergenic | 35.0% | |
| CATGGTAATACAAAGAAGAC+TGG | + | chr1.2:71474055-71474074 | MS.gene60749:CDS | 35.0% | |
| CATTGAACCAACTGAATTAC+TGG | + | chr1.2:71472526-71472545 | MS.gene60749:CDS | 35.0% | |
| CTGAAATGTTACAGGTAACA+TGG | - | chr1.2:71472208-71472227 | None:intergenic | 35.0% | |
| CTTATCAGAACCTGTTGATA+AGG | + | chr1.2:71473818-71473837 | MS.gene60749:CDS | 35.0% | |
| CTTTCAAAGGTGGATGTTTA+GGG | + | chr1.2:71471541-71471560 | MS.gene60749:intron | 35.0% | |
| GAATAAGTTTGAGAGTCAAG+GGG | + | chr1.2:71470748-71470767 | MS.gene60749:intron | 35.0% | |
| GATACGTCATTCACATATGA+TGG | + | chr1.2:71473195-71473214 | MS.gene60749:intron | 35.0% | |
| GATGAACAATAGAGTTGTCA+TGG | + | chr1.2:71474178-71474197 | MS.gene60749:intron | 35.0% | |
| GCAGTAGGAAAAGAAAGTAA+TGG | - | chr1.2:71471158-71471177 | None:intergenic | 35.0% | |
| GGAATAAGTTTGAGAGTCAA+GGG | + | chr1.2:71470747-71470766 | MS.gene60749:intron | 35.0% | |
| GTAATTCCGGAAATATGGTA+AGG | - | chr1.2:71472818-71472837 | None:intergenic | 35.0% | |
| GTCAACCACTTTATTGAGTA+GGG | + | chr1.2:71474233-71474252 | MS.gene60749:intron | 35.0% | |
| GTTTGAATATTATGGGAGGA+TGG | + | chr1.2:71471461-71471480 | MS.gene60749:intron | 35.0% | |
| TATCATTGTTGCTCAGTAAG+GGG | + | chr1.2:71474278-71474297 | MS.gene60749:intron | 35.0% | |
| TCAGGCTAATCAAACAAAGA+AGG | + | chr1.2:71474090-71474109 | MS.gene60749:CDS | 35.0% | |
| TCTGTGATCTCTTTAAGCAA+GGG | - | chr1.2:71470840-71470859 | None:intergenic | 35.0% | |
| TGAATTTGCCACAGTATGAT+TGG | - | chr1.2:71471579-71471598 | None:intergenic | 35.0% | |
| TGCCTCTGGATCTTATTAAA+AGG | + | chr1.2:71473589-71473608 | MS.gene60749:intron | 35.0% | |
| TGTCAACCACTTTATTGAGT+AGG | + | chr1.2:71474232-71474251 | MS.gene60749:intron | 35.0% | |
| TTAGCAGATCCTGTTACTAA+GGG | - | chr1.2:71473656-71473675 | None:intergenic | 35.0% | |
| ! | AAAAACGAAGAAAGAGCGTA+AGG | + | chr1.2:71473277-71473296 | MS.gene60749:intron | 35.0% |
| ! | ACTTGGTAATTCCGGAAATA+TGG | - | chr1.2:71472823-71472842 | None:intergenic | 35.0% |
| ! | CCGAACTTTTAAACTTCAGA+AGG | - | chr1.2:71472297-71472316 | None:intergenic | 35.0% |
| ! | GCAAGCTAATTTTATCCACA+AGG | + | chr1.2:71470965-71470984 | MS.gene60749:CDS | 35.0% |
| ! | GCTTCTGTGAAATCTTTTCA+AGG | + | chr1.2:71473318-71473337 | MS.gene60749:intron | 35.0% |
| ! | TAACTGTTGCAGAGAGTTTT+GGG | + | chr1.2:71473850-71473869 | MS.gene60749:CDS | 35.0% |
| ! | TATTGCTTAGCTTTCAAAGG+TGG | + | chr1.2:71471531-71471550 | MS.gene60749:intron | 35.0% |
| ! | TCTTTTTATGAAGGCTGAAG+TGG | + | chr1.2:71472349-71472368 | MS.gene60749:intron | 35.0% |
| ! | TTAACTGTTGCAGAGAGTTT+TGG | + | chr1.2:71473849-71473868 | MS.gene60749:CDS | 35.0% |
| ! | TTGTTTTCCCTTGTCCATTA+AGG | - | chr1.2:71473633-71473652 | None:intergenic | 35.0% |
| !! | AAAAATAAATGGGTTGGGAG+TGG | + | chr1.2:71470597-71470616 | MS.gene60749:intron | 35.0% |
| !! | ATTGCATTTGGTGCAACAAA+GGG | + | chr1.2:71470797-71470816 | MS.gene60749:intron | 35.0% |
| !! | TATTGCATTTGGTGCAACAA+AGG | + | chr1.2:71470796-71470815 | MS.gene60749:intron | 35.0% |
| !! | TTTTGGATTTGGCTTCTTAG+TGG | + | chr1.2:71471912-71471931 | MS.gene60749:intron | 35.0% |
| !! | TTTTGGTGTAAATGCAGCTT+TGG | + | chr1.2:71473128-71473147 | MS.gene60749:intron | 35.0% |
| !!! | ACAGTATGATTGGTTGGTTT+TGG | - | chr1.2:71471569-71471588 | None:intergenic | 35.0% |
| !!! | ACTTCATACCGTATCGATTT+TGG | + | chr1.2:71474383-71474402 | MS.gene60749:intron | 35.0% |
| AAGAAGGAAAAGAAGCTGTG+AGG | + | chr1.2:71474106-71474125 | MS.gene60749:intron | 40.0% | |
| ACAAACCACCTTATCAGTCA+AGG | + | chr1.2:71471844-71471863 | MS.gene60749:CDS | 40.0% | |
| ACGGTATGAAGTCGGAAATA+TGG | - | chr1.2:71474375-71474394 | None:intergenic | 40.0% | |
| ACTTAAAGCAAGCAGGATGA+AGG | + | chr1.2:71472391-71472410 | MS.gene60749:CDS | 40.0% | |
| AGAAGGAAAAGAAGCTGTGA+GGG | + | chr1.2:71474107-71474126 | MS.gene60749:intron | 40.0% | |
| AGACCATATAGCCTAGAGTA+TGG | - | chr1.2:71471731-71471750 | None:intergenic | 40.0% | |
| ATCACTTCTAACCACTCCTT+CGG | - | chr1.2:71471385-71471404 | None:intergenic | 40.0% | |
| ATGACATGCTTAGGCATGAA+CGG | + | chr1.2:71473247-71473266 | MS.gene60749:intron | 40.0% | |
| ATGGTTGTGTATTAACCTGC+TGG | + | chr1.2:71471793-71471812 | MS.gene60749:intron | 40.0% | |
| CAAGACCCTACTCAATAAAG+TGG | - | chr1.2:71474241-71474260 | None:intergenic | 40.0% | |
| CAGAGAATTCCCGGTATTTA+TGG | + | chr1.2:71472999-71473018 | MS.gene60749:intron | 40.0% | |
| CGGTATGAAGTCGGAAATAT+GGG | - | chr1.2:71474374-71474393 | None:intergenic | 40.0% | |
| GAAGGGAAAACTCATACACA+AGG | + | chr1.2:71474488-71474507 | MS.gene60749:CDS | 40.0% | |
| GACAGAAGCTGAAATGTTAC+AGG | - | chr1.2:71472216-71472235 | None:intergenic | 40.0% | |
| GAGACATTACCTCAAACACT+TGG | - | chr1.2:71470629-71470648 | None:intergenic | 40.0% | |
| GCTTTCAAAGGTGGATGTTT+AGG | + | chr1.2:71471540-71471559 | MS.gene60749:intron | 40.0% | |
| GGAAAACAACCCTTAGTAAC+AGG | + | chr1.2:71473644-71473663 | MS.gene60749:CDS | 40.0% | |
| GGGAATAAGTTTGAGAGTCA+AGG | + | chr1.2:71470746-71470765 | MS.gene60749:intron | 40.0% | |
| GTCAATGAAGTCACTATTCC+TGG | + | chr1.2:71472233-71472252 | MS.gene60749:CDS | 40.0% | |
| GTCTGATCTCCATCTTACAT+TGG | + | chr1.2:71471747-71471766 | MS.gene60749:intron | 40.0% | |
| GTCTGTGATCTCTTTAAGCA+AGG | - | chr1.2:71470841-71470860 | None:intergenic | 40.0% | |
| GTTCATCAAGATGTGACACT+TGG | - | chr1.2:71474165-71474184 | None:intergenic | 40.0% | |
| TGCTTAAAGAGATCACAGAC+AGG | + | chr1.2:71470841-71470860 | MS.gene60749:intron | 40.0% | |
| TGCTTCTTTGAGTGCCTTAA+TGG | + | chr1.2:71473616-71473635 | MS.gene60749:CDS | 40.0% | |
| TTCTCTACTGTTTACGCAGA+TGG | + | chr1.2:71474464-71474483 | MS.gene60749:CDS | 40.0% | |
| TTGACCAACTTAAAGCAAGC+AGG | + | chr1.2:71472384-71472403 | MS.gene60749:CDS | 40.0% | |
| TTGGCCTAAAGCTTCTTCTT+TGG | - | chr1.2:71472573-71472592 | None:intergenic | 40.0% | |
| TTGTCAGCCAGTAATTCAGT+TGG | - | chr1.2:71472536-71472555 | None:intergenic | 40.0% | |
| TTTGCCACAGTATGATTGGT+TGG | - | chr1.2:71471575-71471594 | None:intergenic | 40.0% | |
| ! | AAGCCTTTTGCCTTATCAAC+AGG | - | chr1.2:71473831-71473850 | None:intergenic | 40.0% |
| ! | ACATGGGTTATGACTTATGC+AGG | + | chr1.2:71471958-71471977 | MS.gene60749:intron | 40.0% |
| ! | ACGTTGTAGACTCTAAAGAG+TGG | + | chr1.2:71474341-71474360 | MS.gene60749:intron | 40.0% |
| ! | GAACCTGTTGATAAGGCAAA+AGG | + | chr1.2:71473825-71473844 | MS.gene60749:CDS | 40.0% |
| ! | TCATCCTGCTTGCTTTAAGT+TGG | - | chr1.2:71472391-71472410 | None:intergenic | 40.0% |
| ! | TGCAGCTTTGGTTGATACAT+TGG | + | chr1.2:71473140-71473159 | MS.gene60749:intron | 40.0% |
| ! | TTGAGTGCCTTAATGGACAA+GGG | + | chr1.2:71473623-71473642 | MS.gene60749:CDS | 40.0% |
| ! | TTTGAGTGCCTTAATGGACA+AGG | + | chr1.2:71473622-71473641 | MS.gene60749:CDS | 40.0% |
| !! | GCGGTTGTAGTTTGATTTGA+AGG | + | chr1.2:71472100-71472119 | MS.gene60749:intron | 40.0% |
| !! | TGCTGCATTTAGAGGTATCA+AGG | + | chr1.2:71471869-71471888 | MS.gene60749:intron | 40.0% |
| !!! | AGAGAGTTTTGGGATTTCAC+AGG | + | chr1.2:71473860-71473879 | MS.gene60749:CDS | 40.0% |
| !!! | GGACAGGTCTTTGTTTTACA+AGG | + | chr1.2:71471818-71471837 | MS.gene60749:intron | 40.0% |
| AACAGAGTCATACCAGTGGT+TGG | - | chr1.2:71474137-71474156 | None:intergenic | 45.0% | |
| AACCTGTCACAGGAAAGATG+TGG | - | chr1.2:71470931-71470950 | None:intergenic | 45.0% | |
| ACATCTTTCCTGTGACAGGT+TGG | + | chr1.2:71470930-71470949 | MS.gene60749:intron | 45.0% | |
| ACTGAGTCTGTGTCTGATCA+TGG | + | chr1.2:71474037-71474056 | MS.gene60749:CDS | 45.0% | |
| ACTGTTTACGCAGATGGAGA+AGG | + | chr1.2:71474470-71474489 | MS.gene60749:CDS | 45.0% | |
| ATACCTTCTTAGGTGCCTTG+TGG | - | chr1.2:71470983-71471002 | None:intergenic | 45.0% | |
| ATCATGCACGACCATACTCT+AGG | + | chr1.2:71471717-71471736 | MS.gene60749:intron | 45.0% | |
| CATAATCTCTGTTGGTCCGA+AGG | + | chr1.2:71471366-71471385 | MS.gene60749:intron | 45.0% | |
| CGACCATACTCTAGGCTATA+TGG | + | chr1.2:71471725-71471744 | MS.gene60749:intron | 45.0% | |
| CTGTTTACGCAGATGGAGAA+GGG | + | chr1.2:71474471-71474490 | MS.gene60749:CDS | 45.0% | |
| GAAGAACAGAGTCATACCAG+TGG | - | chr1.2:71474141-71474160 | None:intergenic | 45.0% | |
| GCAAACCTAACAACAGGTGA+AGG | - | chr1.2:71471640-71471659 | None:intergenic | 45.0% | |
| GCAATACAGCAGAAGGTTGA+GGG | - | chr1.2:71474678-71474697 | None:intergenic | 45.0% | |
| GCACAAGCAAACCTAACAAC+AGG | - | chr1.2:71471646-71471665 | None:intergenic | 45.0% | |
| GGTTGCCAAAACACATGCAT+GGG | + | chr1.2:71473161-71473180 | MS.gene60749:intron | 45.0% | |
| GGTTTCCTTCACCTGTTGTT+AGG | + | chr1.2:71471632-71471651 | MS.gene60749:intron | 45.0% | |
| TAAGAAAACGTGAGATGCGG+AGG | + | chr1.2:71473465-71473484 | MS.gene60749:intron | 45.0% | |
| TACCACATCTTTCCTGTGAC+AGG | + | chr1.2:71470926-71470945 | MS.gene60749:intron | 45.0% | |
| TCAAACGAGCAGAGAATTCC+CGG | + | chr1.2:71472990-71473009 | MS.gene60749:intron | 45.0% | |
| TGACATGCTTAGGCATGAAC+GGG | + | chr1.2:71473248-71473267 | MS.gene60749:intron | 45.0% | |
| TGCTGCAAGAGAGAAGATCA+TGG | + | chr1.2:71472484-71472503 | MS.gene60749:CDS | 45.0% | |
| TGGTTGCCAAAACACATGCA+TGG | + | chr1.2:71473160-71473179 | MS.gene60749:intron | 45.0% | |
| TTGTGTATTAACCTGCTGGC+AGG | + | chr1.2:71471797-71471816 | MS.gene60749:intron | 45.0% | |
| ! | CAGTAAGGGGTATATTGCTC+AGG | + | chr1.2:71474291-71474310 | MS.gene60749:intron | 45.0% |
| ! | CTCTTCCCATGCATGTGTTT+TGG | - | chr1.2:71473169-71473188 | None:intergenic | 45.0% |
| ! | CTGGCTTGAGGACTATAATC+GGG | + | chr1.2:71472646-71472665 | MS.gene60749:CDS | 45.0% |
| ! | TATCCACAAGGCACCTAAGA+AGG | + | chr1.2:71470977-71470996 | MS.gene60749:CDS | 45.0% |
| !! | GCTGGCTTGAGGACTATAAT+CGG | + | chr1.2:71472645-71472664 | MS.gene60749:CDS | 45.0% |
| !! | TCAAGGCTTGCTGCATTTAG+AGG | + | chr1.2:71471861-71471880 | MS.gene60749:CDS | 45.0% |
| !! | AATATTTAAAAAGAATAATT+TGG | - | chr1.2:71473352-71473371 | None:intergenic | 5.0% |
| AGAATTTCTCAGCTCCAGCG+CGG | - | chr1.2:71474621-71474640 | None:intergenic | 50.0% | |
| CAGCATGTGAAGAAGAGAGC+TGG | + | chr1.2:71472627-71472646 | MS.gene60749:CDS | 50.0% | |
| CTCACCTCTCTCACCAAAAC+TGG | - | chr1.2:71472708-71472727 | None:intergenic | 50.0% | |
| GCAAGCCTTGACTGATAAGG+TGG | - | chr1.2:71471852-71471871 | None:intergenic | 50.0% | |
| GCAGCAAGCCTTGACTGATA+AGG | - | chr1.2:71471855-71471874 | None:intergenic | 50.0% | |
| GGCAATACAGCAGAAGGTTG+AGG | - | chr1.2:71474679-71474698 | None:intergenic | 50.0% | |
| GGGAATTCTCTGCTCGTTTG+AGG | - | chr1.2:71472991-71473010 | None:intergenic | 50.0% | |
| GTCATCGCTGAAGAAACTGC+AGG | - | chr1.2:71474596-71474615 | None:intergenic | 50.0% | |
| GTTTGAGAGTCAAGGGGATG+AGG | + | chr1.2:71470754-71470773 | MS.gene60749:intron | 50.0% | |
| TATTAACCTGCTGGCAGGAC+AGG | + | chr1.2:71471802-71471821 | MS.gene60749:intron | 50.0% | |
| TATTCCTGGTGCACTTGCTC+TGG | + | chr1.2:71472247-71472266 | MS.gene60749:CDS | 50.0% | |
| TCACATCACCAACCTGTCAC+AGG | - | chr1.2:71470941-71470960 | None:intergenic | 50.0% | |
| ! | GGTGTCGCAGGTCAATTAGT+TGG | + | chr1.2:71474569-71474588 | MS.gene60749:CDS | 50.0% |
| ! | TGCTCTGGATCTGATTGAGC+AGG | + | chr1.2:71472262-71472281 | MS.gene60749:CDS | 50.0% |
| !! | AGAAGGTTGAGGGCACTTGT+GGG | - | chr1.2:71474668-71474687 | None:intergenic | 50.0% |
| !! | GACTGGTGCTGCTTATGATC+AGG | + | chr1.2:71474072-71474091 | MS.gene60749:CDS | 50.0% |
| !! | GTGTCCAGTTTTGGTGAGAG+AGG | + | chr1.2:71472701-71472720 | MS.gene60749:intron | 50.0% |
| !! | TGAAGAAGAGAGCTGGCTTG+AGG | + | chr1.2:71472634-71472653 | MS.gene60749:CDS | 50.0% |
| AATTGACCTGCGACACCAGC+AGG | - | chr1.2:71474566-71474585 | None:intergenic | 55.0% | |
| AGATCCAGAGCAAGTGCACC+AGG | - | chr1.2:71472254-71472273 | None:intergenic | 55.0% | |
| ATTGACCTGCGACACCAGCA+GGG | - | chr1.2:71474565-71474584 | None:intergenic | 55.0% | |
| GAAAACGTGAGATGCGGAGG+AGG | + | chr1.2:71473468-71473487 | MS.gene60749:intron | 55.0% | |
| TCTCTGTTGGTCCGAAGGAG+TGG | + | chr1.2:71471371-71471390 | MS.gene60749:intron | 55.0% | |
| TGAGAGTCAAGGGGATGAGG+AGG | + | chr1.2:71470757-71470776 | MS.gene60749:intron | 55.0% | |
| TGGCGCTCACCAAGTGTTTG+AGG | + | chr1.2:71470617-71470636 | MS.gene60749:intron | 55.0% | |
| TGTGAGGGAACACCAACCAC+TGG | + | chr1.2:71474122-71474141 | MS.gene60749:intron | 55.0% | |
| !! | CAGAAGGTTGAGGGCACTTG+TGG | - | chr1.2:71474669-71474688 | None:intergenic | 55.0% |
| ATGATGGCAGTTGCCCCTGC+TGG | + | chr1.2:71474548-71474567 | MS.gene60749:CDS | 60.0% | |
| ATTTCTCAGCTCCAGCGCGG+TGG | - | chr1.2:71474618-71474637 | None:intergenic | 60.0% | |
| CAAAGACCTGTCCTGCCAGC+AGG | - | chr1.2:71471811-71471830 | None:intergenic | 60.0% | |
| TTGACCTGCGACACCAGCAG+GGG | - | chr1.2:71474564-71474583 | None:intergenic | 60.0% | |
| TTCAGCGATGACCACCGCGC+TGG | + | chr1.2:71474604-71474623 | MS.gene60749:CDS | 65.0% | |
| !! | GTTGCCCCTGCTGGTGTCGC+AGG | + | chr1.2:71474557-71474576 | MS.gene60749:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 71470463 | 71474703 | 71470463 | ID=MS.gene60749 |
| chr1.2 | mRNA | 71470463 | 71474703 | 71470463 | ID=MS.gene60749.t1;Parent=MS.gene60749 |
| chr1.2 | exon | 71470463 | 71470480 | 71470463 | ID=MS.gene60749.t1.exon1;Parent=MS.gene60749.t1 |
| chr1.2 | CDS | 71470463 | 71470480 | 71470463 | ID=cds.MS.gene60749.t1;Parent=MS.gene60749.t1 |
| chr1.2 | exon | 71470948 | 71470998 | 71470948 | ID=MS.gene60749.t1.exon2;Parent=MS.gene60749.t1 |
| chr1.2 | CDS | 71470948 | 71470998 | 71470948 | ID=cds.MS.gene60749.t1;Parent=MS.gene60749.t1 |
| chr1.2 | exon | 71471819 | 71471882 | 71471819 | ID=MS.gene60749.t1.exon3;Parent=MS.gene60749.t1 |
| chr1.2 | CDS | 71471819 | 71471882 | 71471819 | ID=cds.MS.gene60749.t1;Parent=MS.gene60749.t1 |
| chr1.2 | exon | 71472228 | 71472283 | 71472228 | ID=MS.gene60749.t1.exon4;Parent=MS.gene60749.t1 |
| chr1.2 | CDS | 71472228 | 71472283 | 71472228 | ID=cds.MS.gene60749.t1;Parent=MS.gene60749.t1 |
| chr1.2 | exon | 71472362 | 71472667 | 71472362 | ID=MS.gene60749.t1.exon5;Parent=MS.gene60749.t1 |
| chr1.2 | CDS | 71472362 | 71472667 | 71472362 | ID=cds.MS.gene60749.t1;Parent=MS.gene60749.t1 |
| chr1.2 | exon | 71473611 | 71473688 | 71473611 | ID=MS.gene60749.t1.exon6;Parent=MS.gene60749.t1 |
| chr1.2 | CDS | 71473611 | 71473688 | 71473611 | ID=cds.MS.gene60749.t1;Parent=MS.gene60749.t1 |
| chr1.2 | exon | 71473807 | 71473881 | 71473807 | ID=MS.gene60749.t1.exon7;Parent=MS.gene60749.t1 |
| chr1.2 | CDS | 71473807 | 71473881 | 71473807 | ID=cds.MS.gene60749.t1;Parent=MS.gene60749.t1 |
| chr1.2 | exon | 71473998 | 71474122 | 71473998 | ID=MS.gene60749.t1.exon8;Parent=MS.gene60749.t1 |
| chr1.2 | CDS | 71473998 | 71474122 | 71473998 | ID=cds.MS.gene60749.t1;Parent=MS.gene60749.t1 |
| chr1.2 | exon | 71474457 | 71474703 | 71474457 | ID=MS.gene60749.t1.exon9;Parent=MS.gene60749.t1 |
| chr1.2 | CDS | 71474457 | 71474703 | 71474457 | ID=cds.MS.gene60749.t1;Parent=MS.gene60749.t1 |
| Gene Sequence |
| Protein sequence |
