Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60759.t1 | XP_013469567.1 | 95.8 | 213 | 9 | 0 | 1 | 213 | 1 | 213 | 1.90E-109 | 405.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60759.t1 | Q8RWM7 | 76.3 | 118 | 28 | 0 | 94 | 211 | 54 | 171 | 3.1e-44 | 179.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60759.t1 | A0A072VZW8 | 95.8 | 213 | 9 | 0 | 1 | 213 | 1 | 213 | 1.3e-109 | 405.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049614 | MS.gene60759 | 0.800418 | 1.45E-48 | -1.69E-46 |
| MS.gene057011 | MS.gene60759 | 0.80157 | 8.46E-49 | -1.69E-46 |
| MS.gene059858 | MS.gene60759 | 0.80829 | 3.33E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60759.t1 | MTR_1g097270 | 95.775 | 213 | 9 | 0 | 1 | 213 | 1 | 213 | 1.60e-150 | 416 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60759.t1 | AT5G36120 | 76.271 | 118 | 28 | 0 | 94 | 211 | 54 | 171 | 2.75e-60 | 187 |
Find 51 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATCCAAACCTGCCAATTT+TGG | 0.169090 | 1.2:-71578728 | MS.gene60759:CDS |
| AAATTAGCTATTGGATTTCT+AGG | 0.235118 | 1.2:-71577293 | MS.gene60759:CDS |
| GCAGTAGCTCCATTTAATAT+TGG | 0.271603 | 1.2:+71577440 | None:intergenic |
| GCTACTGCAAAATTAGCTAT+TGG | 0.286164 | 1.2:-71577302 | MS.gene60759:CDS |
| GTGGAAGTGTGTAAAGTTTC+TGG | 0.288531 | 1.2:+71577365 | None:intergenic |
| AACTTTCCAACAGGAAGTTT+TGG | 0.312804 | 1.2:+71577212 | None:intergenic |
| TGCACAGAAATGTCTTGATT+TGG | 0.315171 | 1.2:-71577420 | MS.gene60759:CDS |
| CAGTAGCTCCATTTAATATT+GGG | 0.326304 | 1.2:+71577441 | None:intergenic |
| GGTCCCTTCCTCTCAGCATT+TGG | 0.328305 | 1.2:-71577272 | MS.gene60759:CDS |
| GCAACATTCCCAATATTAAA+TGG | 0.330420 | 1.2:-71577449 | MS.gene60759:CDS |
| AAAGCCAAAATTGGCAGGTT+TGG | 0.360862 | 1.2:+71578724 | None:intergenic |
| GTTACTCCTGTGGTTTGGTT+TGG | 0.363880 | 1.2:-71577107 | MS.gene60759:CDS |
| ATAGACGCCAAAGCCAAAAT+TGG | 0.364576 | 1.2:+71578715 | None:intergenic |
| AAAGTGATTCCACCTCTTGC+TGG | 0.406086 | 1.2:-71577137 | MS.gene60759:CDS |
| TCCTTCCATGCGGGAATCAC+AGG | 0.433314 | 1.2:-71578859 | MS.gene60759:intron |
| CCATTGACATTTCTTCTAGT+AGG | 0.436924 | 1.2:+71577530 | None:intergenic |
| TGGATGTTACTCCTGTGGTT+TGG | 0.458618 | 1.2:-71577112 | MS.gene60759:CDS |
| TTGGCAGGTTTGGATATTGA+AGG | 0.472026 | 1.2:+71578734 | None:intergenic |
| ACATACGGAAACTTTCCAAC+AGG | 0.474088 | 1.2:+71577203 | None:intergenic |
| GATTCCACCTCTTGCTGGTG+TGG | 0.479342 | 1.2:-71577132 | MS.gene60759:CDS |
| TGTTCATGTTACACGGAAGT+TGG | 0.493516 | 1.2:-71577485 | MS.gene60759:CDS |
| ATATTGACTTGAATATCCTC+AGG | 0.499471 | 1.2:-71577397 | MS.gene60759:CDS |
| ACGGAAGTTGGAGCTTCTGC+CGG | 0.499475 | 1.2:-71577473 | MS.gene60759:CDS |
| AAAACCAAATGCTGAGAGGA+AGG | 0.508019 | 1.2:+71577268 | None:intergenic |
| ACTTCCACAGATTTCATGAC+AGG | 0.516968 | 1.2:-71577350 | MS.gene60759:CDS |
| ACCTGTGATTCCCGCATGGA+AGG | 0.525174 | 1.2:+71578858 | None:intergenic |
| ACGCCAAAGCCAAAATTGGC+AGG | 0.529560 | 1.2:+71578719 | None:intergenic |
| CCTACTAGAAGAAATGTCAA+TGG | 0.533441 | 1.2:-71577530 | MS.gene60759:CDS |
| ACTAATTGACTTGTTGTGAA+AGG | 0.535966 | 1.2:+71577030 | None:intergenic |
| AATCTCAACTCCTTCCATGC+GGG | 0.548178 | 1.2:-71578868 | MS.gene60759:CDS |
| GGAGCATAAGCTATTACATA+CGG | 0.551916 | 1.2:+71577188 | None:intergenic |
| GGAACGAGAAGCGGTTCAGT+AGG | 0.554123 | 1.2:+71577167 | None:intergenic |
| TTTCTTAACGAAATATTAGT+GGG | 0.558433 | 1.2:-71577074 | MS.gene60759:CDS |
| TGGTATCCAAAACTTCCTGT+TGG | 0.580837 | 1.2:-71577218 | MS.gene60759:CDS |
| TAATATTGGGAATGTTGCGC+CGG | 0.581276 | 1.2:+71577454 | None:intergenic |
| TGGTGTGGATGTTACTCCTG+TGG | 0.582978 | 1.2:-71577117 | MS.gene60759:CDS |
| GGTGGAATCACTTTGCGAGT+AGG | 0.596999 | 1.2:+71577146 | None:intergenic |
| TTGCGAGTAGGAACGAGAAG+CGG | 0.601669 | 1.2:+71577158 | None:intergenic |
| CAATCCTGTCATGAAATCTG+TGG | 0.605529 | 1.2:+71577346 | None:intergenic |
| TCGTGAGAATAGTCATGTCA+TGG | 0.608890 | 1.2:-71577238 | MS.gene60759:CDS |
| AAACCAAATGCTGAGAGGAA+GGG | 0.610645 | 1.2:+71577269 | None:intergenic |
| AGCAATCCAAACCAAACCAC+AGG | 0.619774 | 1.2:+71577101 | None:intergenic |
| GAAATATTAGTGGGTCCACA+AGG | 0.621452 | 1.2:-71577065 | MS.gene60759:CDS |
| GCGATGTTGTTCATGTTACA+CGG | 0.621789 | 1.2:-71577492 | MS.gene60759:CDS |
| ACATCCACACCAGCAAGAGG+TGG | 0.639484 | 1.2:+71577128 | None:intergenic |
| TTTCTGGTATGTTAAGCCTG+AGG | 0.659951 | 1.2:+71577381 | None:intergenic |
| GTAACATCCACACCAGCAAG+AGG | 0.665466 | 1.2:+71577125 | None:intergenic |
| AGTTACCTGTGATTCCCGCA+TGG | 0.670789 | 1.2:+71578854 | None:intergenic |
| AGAGAAAACCAAATGCTGAG+AGG | 0.680045 | 1.2:+71577264 | None:intergenic |
| TAATCTCAACTCCTTCCATG+CGG | 0.694188 | 1.2:-71578869 | MS.gene60759:CDS |
| AGGAGAACAAGTAATCCTTG+TGG | 0.699959 | 1.2:+71577050 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACATTTTCTTTAATAAAT+AGG | - | chr1.2:71577299-71577318 | MS.gene60759:CDS | 10.0% |
| !!! | AACATTTTCTTTAATAAATA+GGG | - | chr1.2:71577300-71577319 | MS.gene60759:CDS | 10.0% |
| !! | AACTGAAATATCCATAAATA+TGG | + | chr1.2:71577354-71577373 | None:intergenic | 20.0% |
| !! | ATTTGCTTAAACAAACTTAA+TGG | + | chr1.2:71578262-71578281 | None:intergenic | 20.0% |
| !! | TATTATTACTTGAACGATTA+GGG | - | chr1.2:71577740-71577759 | MS.gene60759:intron | 20.0% |
| !! | TATTGAATTAGTTGAACAAA+TGG | - | chr1.2:71577375-71577394 | MS.gene60759:CDS | 20.0% |
| !! | TTTCTTAACGAAATATTAGT+GGG | - | chr1.2:71578849-71578868 | MS.gene60759:intron | 20.0% |
| !!! | ATTTTTTCAATCTTGTAGAA+CGG | - | chr1.2:71577163-71577182 | MS.gene60759:CDS | 20.0% |
| !!! | TTTTCTTAACGAAATATTAG+TGG | - | chr1.2:71578848-71578867 | MS.gene60759:intron | 20.0% |
| ! | AAATTAGCTATTGGATTTCT+AGG | - | chr1.2:71578630-71578649 | MS.gene60759:intron | 25.0% |
| ! | AAGCAATACACATAATACTA+CGG | - | chr1.2:71577776-71577795 | MS.gene60759:intron | 25.0% |
| ! | ACTCATTATCACTTAATTGT+AGG | - | chr1.2:71577484-71577503 | MS.gene60759:CDS | 25.0% |
| ! | GCTAATAAATAAGTAAAGCT+TGG | + | chr1.2:71578047-71578066 | None:intergenic | 25.0% |
| ! | GGATTCATAAAGTTTGATAT+TGG | - | chr1.2:71577454-71577473 | MS.gene60759:CDS | 25.0% |
| ! | GTATTATTACTTGAACGATT+AGG | - | chr1.2:71577739-71577758 | MS.gene60759:intron | 25.0% |
| ! | GTTCTACAAGATTGAAAAAA+TGG | + | chr1.2:71577164-71577183 | None:intergenic | 25.0% |
| !!! | ATTTATTCTGAGATATGTTG+AGG | - | chr1.2:71577400-71577419 | MS.gene60759:CDS | 25.0% |
| !!! | TTTATTCTGAGATATGTTGA+GGG | - | chr1.2:71577401-71577420 | MS.gene60759:CDS | 25.0% |
| AAAGAGTGAAAGTGAAATGA+AGG | + | chr1.2:71577132-71577151 | None:intergenic | 30.0% | |
| CAATTTATTCCTAATCCTAC+TGG | - | chr1.2:71578208-71578227 | MS.gene60759:intron | 30.0% | |
| CAGTAGCTCCATTTAATATT+GGG | + | chr1.2:71578485-71578504 | None:intergenic | 30.0% | |
| GCAACATTCCCAATATTAAA+TGG | - | chr1.2:71578474-71578493 | MS.gene60759:intron | 30.0% | |
| TAGTTGCAGTACCATATTTA+TGG | - | chr1.2:71577340-71577359 | MS.gene60759:CDS | 30.0% | |
| TGGAAGAAAATGCATATGTT+TGG | + | chr1.2:71578290-71578309 | None:intergenic | 30.0% | |
| TTATAACGACTAATACCAGT+AGG | + | chr1.2:71578226-71578245 | None:intergenic | 30.0% | |
| ! | AATACAAGTTGTGATTTGTG+AGG | + | chr1.2:71577258-71577277 | None:intergenic | 30.0% |
| ! | TTAATTGTAGGTTGCTTTGT+AGG | - | chr1.2:71577496-71577515 | MS.gene60759:CDS | 30.0% |
| !! | ACAATTCAATTTGTTGAGCA+TGG | + | chr1.2:71577981-71578000 | None:intergenic | 30.0% |
| !! | ATATTGACTTGAATATCCTC+AGG | - | chr1.2:71578526-71578545 | MS.gene60759:intron | 30.0% |
| !!! | CAGTTCAGTTGTTTTTTTGT+AGG | - | chr1.2:71578175-71578194 | MS.gene60759:intron | 30.0% |
| AAAACAACTGAACTGTTGCA+TGG | + | chr1.2:71578170-71578189 | None:intergenic | 35.0% | |
| AAACAACTGAACTGTTGCAT+GGG | + | chr1.2:71578169-71578188 | None:intergenic | 35.0% | |
| AAATAAGTAAAGCTTGGCCA+AGG | + | chr1.2:71578041-71578060 | None:intergenic | 35.0% | |
| CAAGTTATCTTAGCACTGTT+TGG | - | chr1.2:71578338-71578357 | MS.gene60759:intron | 35.0% | |
| CCATTGACATTTCTTCTAGT+AGG | + | chr1.2:71578396-71578415 | None:intergenic | 35.0% | |
| CCTACTAGAAGAAATGTCAA+TGG | - | chr1.2:71578393-71578412 | MS.gene60759:intron | 35.0% | |
| GAAGGTGGAAATGATAAGAA+TGG | + | chr1.2:71577114-71577133 | None:intergenic | 35.0% | |
| GCAGTAGCTCCATTTAATAT+TGG | + | chr1.2:71578486-71578505 | None:intergenic | 35.0% | |
| GCTACTGCAAAATTAGCTAT+TGG | - | chr1.2:71578621-71578640 | MS.gene60759:intron | 35.0% | |
| GGAGCATAAGCTATTACATA+CGG | + | chr1.2:71578738-71578757 | None:intergenic | 35.0% | |
| TGCACAGAAATGTCTTGATT+TGG | - | chr1.2:71578503-71578522 | MS.gene60759:intron | 35.0% | |
| TTCGGTAGTTTCTTAGGATT+TGG | - | chr1.2:71577433-71577452 | MS.gene60759:CDS | 35.0% | |
| ! | AACTTTCCAACAGGAAGTTT+TGG | + | chr1.2:71578714-71578733 | None:intergenic | 35.0% |
| ! | ATAGCTAATTTTGCAGTAGC+AGG | + | chr1.2:71578621-71578640 | None:intergenic | 35.0% |
| ! | ATATCCAAACCTGCCAATTT+TGG | - | chr1.2:71577195-71577214 | MS.gene60759:CDS | 35.0% |
| ! | GTTTATATCGCTACTAGCTT+TGG | - | chr1.2:71577518-71577537 | MS.gene60759:CDS | 35.0% |
| ! | TAACATGATATTTTGCAGCG+TGG | + | chr1.2:71578310-71578329 | None:intergenic | 35.0% |
| ! | TGAACACACTAGCATTTTTC+CGG | + | chr1.2:71578120-71578139 | None:intergenic | 35.0% |
| ! | TTAGGCACAACTTTTTGTTG+TGG | + | chr1.2:71577868-71577887 | None:intergenic | 35.0% |
| ! | TTTACCCTTGCCTTTTTGTT+TGG | + | chr1.2:71577903-71577922 | None:intergenic | 35.0% |
| ! | TTTGTTGTGGGGATTAGAAT+GGG | + | chr1.2:71577855-71577874 | None:intergenic | 35.0% |
| !! | TAGGCACAACTTTTTGTTGT+GGG | + | chr1.2:71577867-71577886 | None:intergenic | 35.0% |
| !! | TTTTGTTGTGGGGATTAGAA+TGG | + | chr1.2:71577856-71577875 | None:intergenic | 35.0% |
| AAAACCAAATGCTGAGAGGA+AGG | + | chr1.2:71578658-71578677 | None:intergenic | 40.0% | |
| AAACCAAATGCTGAGAGGAA+GGG | + | chr1.2:71578657-71578676 | None:intergenic | 40.0% | |
| AAAGCCAAAATTGGCAGGTT+TGG | + | chr1.2:71577202-71577221 | None:intergenic | 40.0% | |
| ACATACGGAAACTTTCCAAC+AGG | + | chr1.2:71578723-71578742 | None:intergenic | 40.0% | |
| ACTTCCACAGATTTCATGAC+AGG | - | chr1.2:71578573-71578592 | MS.gene60759:intron | 40.0% | |
| AGAGAAAACCAAATGCTGAG+AGG | + | chr1.2:71578662-71578681 | None:intergenic | 40.0% | |
| AGCCAAACGTCATAATACCT+AGG | - | chr1.2:71578064-71578083 | MS.gene60759:intron | 40.0% | |
| AGGAGAACAAGTAATCCTTG+TGG | + | chr1.2:71578876-71578895 | None:intergenic | 40.0% | |
| ATAGACGCCAAAGCCAAAAT+TGG | + | chr1.2:71577211-71577230 | None:intergenic | 40.0% | |
| CAATCCTGTCATGAAATCTG+TGG | + | chr1.2:71578580-71578599 | None:intergenic | 40.0% | |
| CGACTAATACCAGTAGGATT+AGG | + | chr1.2:71578220-71578239 | None:intergenic | 40.0% | |
| GAGTGAAAGTGAAATGAAGG+TGG | + | chr1.2:71577129-71577148 | None:intergenic | 40.0% | |
| GCGATGTTGTTCATGTTACA+CGG | - | chr1.2:71578431-71578450 | MS.gene60759:intron | 40.0% | |
| GTGACATTCGGTAGTTTCTT+AGG | - | chr1.2:71577427-71577446 | MS.gene60759:CDS | 40.0% | |
| TAATATTGGGAATGTTGCGC+CGG | + | chr1.2:71578472-71578491 | None:intergenic | 40.0% | |
| TAATCTCAACTCCTTCCATG+CGG | - | chr1.2:71577054-71577073 | MS.gene60759:CDS | 40.0% | |
| TCGTGAGAATAGTCATGTCA+TGG | - | chr1.2:71578685-71578704 | MS.gene60759:intron | 40.0% | |
| TGGTATCCAAAACTTCCTGT+TGG | - | chr1.2:71578705-71578724 | MS.gene60759:intron | 40.0% | |
| TGTTCATGTTACACGGAAGT+TGG | - | chr1.2:71578438-71578457 | MS.gene60759:intron | 40.0% | |
| TGTTGAGGGATTGTGACATT+CGG | - | chr1.2:71577415-71577434 | MS.gene60759:CDS | 40.0% | |
| TTGAGCATGGTTCATAGACA+CGG | + | chr1.2:71577968-71577987 | None:intergenic | 40.0% | |
| TTGGCAGGTTTGGATATTGA+AGG | + | chr1.2:71577192-71577211 | None:intergenic | 40.0% | |
| TTGTTGTGGGGATTAGAATG+GGG | + | chr1.2:71577854-71577873 | None:intergenic | 40.0% | |
| ! | GAAATATTAGTGGGTCCACA+AGG | - | chr1.2:71578858-71578877 | MS.gene60759:intron | 40.0% |
| ! | GAGAATTCGAGTTCCAATCT+TGG | - | chr1.2:71578005-71578024 | MS.gene60759:intron | 40.0% |
| ! | GTGGAAGTGTGTAAAGTTTC+TGG | + | chr1.2:71578561-71578580 | None:intergenic | 40.0% |
| ! | TTTCTGGTATGTTAAGCCTG+AGG | + | chr1.2:71578545-71578564 | None:intergenic | 40.0% |
| !! | AGGCACAACTTTTTGTTGTG+GGG | + | chr1.2:71577866-71577885 | None:intergenic | 40.0% |
| !!! | AAACCTGCCAATTTTGGCTT+TGG | - | chr1.2:71577201-71577220 | MS.gene60759:CDS | 40.0% |
| AAAGTGATTCCACCTCTTGC+TGG | - | chr1.2:71578786-71578805 | MS.gene60759:intron | 45.0% | |
| AATCTCAACTCCTTCCATGC+GGG | - | chr1.2:71577055-71577074 | MS.gene60759:CDS | 45.0% | |
| AGCAATCCAAACCAAACCAC+AGG | + | chr1.2:71578825-71578844 | None:intergenic | 45.0% | |
| AGGATAGTTCCAGCCAAGAT+TGG | + | chr1.2:71578021-71578040 | None:intergenic | 45.0% | |
| ATCTTGGCTGGAACTATCCT+TGG | - | chr1.2:71578021-71578040 | MS.gene60759:intron | 45.0% | |
| ATGGTTCATAGACACGGAAG+AGG | + | chr1.2:71577962-71577981 | None:intergenic | 45.0% | |
| GGCCTAGGTATTATGACGTT+TGG | + | chr1.2:71578069-71578088 | None:intergenic | 45.0% | |
| TGCGTTTGGGCCAAACAAAA+AGG | - | chr1.2:71577890-71577909 | MS.gene60759:intron | 45.0% | |
| TGGATGTTACTCCTGTGGTT+TGG | - | chr1.2:71578811-71578830 | MS.gene60759:intron | 45.0% | |
| TGGGCCAAACAAAAAGGCAA+GGG | - | chr1.2:71577896-71577915 | MS.gene60759:intron | 45.0% | |
| TGGTTCATAGACACGGAAGA+GGG | + | chr1.2:71577961-71577980 | None:intergenic | 45.0% | |
| TGTTGTGGGGATTAGAATGG+GGG | + | chr1.2:71577853-71577872 | None:intergenic | 45.0% | |
| TTGCAGACGTAAGCACACTT+GGG | + | chr1.2:71577698-71577717 | None:intergenic | 45.0% | |
| TTGGGCCAAACAAAAAGGCA+AGG | - | chr1.2:71577895-71577914 | MS.gene60759:intron | 45.0% | |
| ! | AGCTTTGGCGTAATGCTAGT+GGG | - | chr1.2:71577533-71577552 | MS.gene60759:CDS | 45.0% |
| ! | ATTCGAGTTCCAATCTTGGC+TGG | - | chr1.2:71578009-71578028 | MS.gene60759:intron | 45.0% |
| ! | TTTTTCCGGTCTCAACTCTC+TGG | + | chr1.2:71578106-71578125 | None:intergenic | 45.0% |
| !! | GTTACTCCTGTGGTTTGGTT+TGG | - | chr1.2:71578816-71578835 | MS.gene60759:intron | 45.0% |
| !! | TAGCTTTGGCGTAATGCTAG+TGG | - | chr1.2:71577532-71577551 | MS.gene60759:CDS | 45.0% |
| ACGCCAAAGCCAAAATTGGC+AGG | + | chr1.2:71577207-71577226 | None:intergenic | 50.0% | |
| AGTTACCTGTGATTCCCGCA+TGG | + | chr1.2:71577072-71577091 | None:intergenic | 50.0% | |
| AGTTGTGCCTAACGTGCGTT+TGG | - | chr1.2:71577876-71577895 | MS.gene60759:intron | 50.0% | |
| ATAGACACGGAAGAGGGGAA+AGG | + | chr1.2:71577955-71577974 | None:intergenic | 50.0% | |
| ATAGCCCATGGTACGGTTCA+GGG | + | chr1.2:71577820-71577839 | None:intergenic | 50.0% | |
| GGTGGAATCACTTTGCGAGT+AGG | + | chr1.2:71578780-71578799 | None:intergenic | 50.0% | |
| GGTTCATAGACACGGAAGAG+GGG | + | chr1.2:71577960-71577979 | None:intergenic | 50.0% | |
| GTAACATCCACACCAGCAAG+AGG | + | chr1.2:71578801-71578820 | None:intergenic | 50.0% | |
| GTTGCAGACGTAAGCACACT+TGG | + | chr1.2:71577699-71577718 | None:intergenic | 50.0% | |
| GTTGTGCCTAACGTGCGTTT+GGG | - | chr1.2:71577877-71577896 | MS.gene60759:intron | 50.0% | |
| TAGACACGGAAGAGGGGAAA+GGG | + | chr1.2:71577954-71577973 | None:intergenic | 50.0% | |
| TGGTGTGGATGTTACTCCTG+TGG | - | chr1.2:71578806-71578825 | MS.gene60759:intron | 50.0% | |
| TTGCGAGTAGGAACGAGAAG+CGG | + | chr1.2:71578768-71578787 | None:intergenic | 50.0% | |
| AATACCTAGGCCCCTTCTCC+TGG | - | chr1.2:71578077-71578096 | MS.gene60759:intron | 55.0% | |
| AATCCCCCTGAACCGTACCA+TGG | - | chr1.2:71577812-71577831 | MS.gene60759:intron | 55.0% | |
| ACATCCACACCAGCAAGAGG+TGG | + | chr1.2:71578798-71578817 | None:intergenic | 55.0% | |
| ACCTGTGATTCCCGCATGGA+AGG | + | chr1.2:71577068-71577087 | None:intergenic | 55.0% | |
| ACGGAAGTTGGAGCTTCTGC+CGG | - | chr1.2:71578450-71578469 | MS.gene60759:intron | 55.0% | |
| AGACACGGAAGAGGGGAAAG+GGG | + | chr1.2:71577953-71577972 | None:intergenic | 55.0% | |
| ATACCTAGGCCCCTTCTCCT+GGG | - | chr1.2:71578078-71578097 | MS.gene60759:intron | 55.0% | |
| ATCCCCCTGAACCGTACCAT+GGG | - | chr1.2:71577813-71577832 | MS.gene60759:intron | 55.0% | |
| GATAGCCCATGGTACGGTTC+AGG | + | chr1.2:71577821-71577840 | None:intergenic | 55.0% | |
| GATTCCACCTCTTGCTGGTG+TGG | - | chr1.2:71578791-71578810 | MS.gene60759:intron | 55.0% | |
| GGAACGAGAAGCGGTTCAGT+AGG | + | chr1.2:71578759-71578778 | None:intergenic | 55.0% | |
| GGGAACCAGAGAGTTGAGAC+CGG | - | chr1.2:71578098-71578117 | MS.gene60759:intron | 55.0% | |
| GGTCCCTTCCTCTCAGCATT+TGG | - | chr1.2:71578651-71578670 | MS.gene60759:intron | 55.0% | |
| GTTTGGCCCAAACGCACGTT+AGG | + | chr1.2:71577886-71577905 | None:intergenic | 55.0% | |
| TAGCCCATGGTACGGTTCAG+GGG | + | chr1.2:71577819-71577838 | None:intergenic | 55.0% | |
| TCCTTCCATGCGGGAATCAC+AGG | - | chr1.2:71577064-71577083 | MS.gene60759:CDS | 55.0% | |
| ! | ACTCTCTGGTTCCCAGGAGA+AGG | + | chr1.2:71578092-71578111 | None:intergenic | 55.0% |
| ! | CTCTCTGGTTCCCAGGAGAA+GGG | + | chr1.2:71578091-71578110 | None:intergenic | 55.0% |
| ! | GGATTAGAATGGGGGTGCAG+GGG | + | chr1.2:71577845-71577864 | None:intergenic | 55.0% |
| ! | GGGATTAGAATGGGGGTGCA+GGG | + | chr1.2:71577846-71577865 | None:intergenic | 55.0% |
| ! | GTCTCAACTCTCTGGTTCCC+AGG | + | chr1.2:71578098-71578117 | None:intergenic | 55.0% |
| ! | TCTCTGGTTCCCAGGAGAAG+GGG | + | chr1.2:71578090-71578109 | None:intergenic | 55.0% |
| AGCCCATGGTACGGTTCAGG+GGG | + | chr1.2:71577818-71577837 | None:intergenic | 60.0% | |
| AGGGGCGATAGCCCATGGTA+CGG | + | chr1.2:71577827-71577846 | None:intergenic | 60.0% | |
| ! | GGGGATTAGAATGGGGGTGC+AGG | + | chr1.2:71577847-71577866 | None:intergenic | 60.0% |
| GGAAGAGGGGAAAGGGGCGA+GGG | + | chr1.2:71577947-71577966 | None:intergenic | 65.0% | |
| GTTCCCAGGAGAAGGGGCCT+AGG | + | chr1.2:71578084-71578103 | None:intergenic | 65.0% | |
| CGGAAGAGGGGAAAGGGGCG+AGG | + | chr1.2:71577948-71577967 | None:intergenic | 70.0% | |
| GGTGCAGGGGCGATAGCCCA+TGG | + | chr1.2:71577832-71577851 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 71577031 | 71578914 | 71577031 | ID=MS.gene60759 |
| chr1.2 | mRNA | 71577031 | 71578914 | 71577031 | ID=MS.gene60759.t1;Parent=MS.gene60759 |
| chr1.2 | exon | 71578860 | 71578914 | 71578860 | ID=MS.gene60759.t1.exon1;Parent=MS.gene60759.t1 |
| chr1.2 | CDS | 71578860 | 71578914 | 71578860 | ID=cds.MS.gene60759.t1;Parent=MS.gene60759.t1 |
| chr1.2 | exon | 71578715 | 71578764 | 71578715 | ID=MS.gene60759.t1.exon2;Parent=MS.gene60759.t1 |
| chr1.2 | CDS | 71578715 | 71578764 | 71578715 | ID=cds.MS.gene60759.t1;Parent=MS.gene60759.t1 |
| chr1.2 | exon | 71577031 | 71577567 | 71577031 | ID=MS.gene60759.t1.exon3;Parent=MS.gene60759.t1 |
| chr1.2 | CDS | 71577031 | 71577567 | 71577031 | ID=cds.MS.gene60759.t1;Parent=MS.gene60759.t1 |
| Gene Sequence |
| Protein sequence |