Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61027.t1 | PNX97012.1 | 70.1 | 334 | 68 | 2 | 1 | 302 | 1 | 334 | 1.90E-131 | 478.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61027.t1 | P52839 | 46.7 | 323 | 141 | 4 | 9 | 302 | 4 | 324 | 7.1e-79 | 295.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61027.t1 | A0A2K3N1W7 | 70.1 | 334 | 68 | 2 | 1 | 302 | 1 | 334 | 1.4e-131 | 478.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene61027 | MS.gene99693 | PPI |
MS.gene61027 | MS.gene53169 | PPI |
MS.gene55382 | MS.gene61027 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61027.t1 | MTR_3g435130 | 69.254 | 335 | 69 | 4 | 1 | 302 | 1 | 334 | 1.31e-166 | 466 |
MS.gene61027.t1 | MTR_8g066220 | 69.162 | 334 | 70 | 3 | 1 | 302 | 1 | 333 | 1.88e-166 | 466 |
MS.gene61027.t1 | MTR_8g066210 | 67.964 | 334 | 59 | 4 | 1 | 302 | 1 | 318 | 2.81e-155 | 437 |
MS.gene61027.t1 | MTR_0071s0010 | 63.720 | 328 | 86 | 3 | 8 | 302 | 6 | 333 | 5.15e-150 | 424 |
MS.gene61027.t1 | MTR_3g046670 | 63.720 | 328 | 86 | 3 | 8 | 302 | 6 | 333 | 5.15e-150 | 424 |
MS.gene61027.t1 | MTR_8g066280 | 80.319 | 188 | 9 | 1 | 143 | 302 | 22 | 209 | 6.44e-104 | 302 |
MS.gene61027.t1 | MTR_3g013500 | 46.226 | 318 | 139 | 2 | 17 | 302 | 20 | 337 | 1.91e-99 | 296 |
MS.gene61027.t1 | MTR_7g007710 | 44.969 | 318 | 138 | 5 | 21 | 302 | 16 | 332 | 3.51e-95 | 285 |
MS.gene61027.t1 | MTR_7g007680 | 42.902 | 317 | 141 | 6 | 21 | 302 | 22 | 333 | 9.32e-91 | 275 |
MS.gene61027.t1 | MTR_8g040820 | 43.082 | 318 | 145 | 5 | 21 | 302 | 27 | 344 | 2.85e-90 | 273 |
MS.gene61027.t1 | MTR_8g035720 | 41.888 | 339 | 150 | 6 | 1 | 302 | 78 | 406 | 4.50e-88 | 269 |
MS.gene61027.t1 | MTR_8g040490 | 41.745 | 321 | 152 | 4 | 17 | 302 | 23 | 343 | 1.63e-86 | 265 |
MS.gene61027.t1 | MTR_8g040430 | 41.411 | 326 | 154 | 5 | 14 | 302 | 20 | 345 | 1.39e-84 | 258 |
MS.gene61027.t1 | MTR_8g040520 | 43.849 | 317 | 139 | 6 | 17 | 297 | 23 | 336 | 3.54e-82 | 252 |
MS.gene61027.t1 | MTR_3g434790 | 64.583 | 192 | 40 | 1 | 139 | 302 | 43 | 234 | 3.30e-79 | 240 |
MS.gene61027.t1 | MTR_3g434790 | 84.211 | 57 | 9 | 0 | 1 | 57 | 1 | 57 | 7.58e-26 | 102 |
MS.gene61027.t1 | MTR_8g041790 | 41.538 | 325 | 140 | 8 | 14 | 302 | 15 | 325 | 1.22e-78 | 242 |
MS.gene61027.t1 | MTR_8g014380 | 43.310 | 284 | 117 | 8 | 17 | 280 | 22 | 281 | 1.64e-68 | 215 |
MS.gene61027.t1 | MTR_8g040250 | 39.677 | 310 | 124 | 8 | 25 | 302 | 15 | 293 | 3.13e-68 | 214 |
MS.gene61027.t1 | MTR_8g040820 | 42.857 | 224 | 96 | 4 | 111 | 302 | 22 | 245 | 5.89e-58 | 187 |
MS.gene61027.t1 | MTR_8g040430 | 42.466 | 219 | 94 | 3 | 116 | 302 | 27 | 245 | 6.68e-55 | 179 |
MS.gene61027.t1 | MTR_8g040730 | 48.223 | 197 | 91 | 6 | 57 | 248 | 24 | 214 | 8.31e-48 | 167 |
MS.gene61027.t1 | MTR_8g040730 | 44.872 | 156 | 77 | 4 | 23 | 172 | 343 | 495 | 2.11e-35 | 134 |
MS.gene61027.t1 | MTR_8g066190 | 69.231 | 91 | 18 | 1 | 222 | 302 | 2 | 92 | 1.17e-32 | 116 |
MS.gene61027.t1 | MTR_8g040710 | 40.940 | 149 | 58 | 2 | 174 | 292 | 134 | 282 | 2.07e-29 | 113 |
MS.gene61027.t1 | MTR_8g040315 | 38.462 | 130 | 53 | 2 | 200 | 302 | 3 | 132 | 3.52e-21 | 87.8 |
MS.gene61027.t1 | MTR_8g066200 | 77.778 | 36 | 8 | 0 | 148 | 183 | 25 | 60 | 4.20e-14 | 66.6 |
MS.gene61027.t1 | MTR_8g040410 | 50.000 | 56 | 26 | 1 | 67 | 120 | 25 | 80 | 4.39e-12 | 63.2 |
MS.gene61027.t1 | MTR_8g040410 | 42.254 | 71 | 31 | 1 | 214 | 274 | 75 | 145 | 1.31e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61027.t1 | AT5G07010 | 44.000 | 325 | 147 | 4 | 12 | 302 | 33 | 356 | 2.13e-96 | 289 |
MS.gene61027.t1 | AT2G03760 | 46.769 | 325 | 138 | 7 | 9 | 302 | 4 | 324 | 2.01e-95 | 285 |
MS.gene61027.t1 | AT3G45070 | 46.519 | 316 | 135 | 4 | 20 | 302 | 14 | 328 | 2.19e-92 | 277 |
MS.gene61027.t1 | AT3G45070 | 46.519 | 316 | 135 | 4 | 20 | 302 | 9 | 323 | 2.59e-92 | 277 |
MS.gene61027.t1 | AT3G45070 | 46.519 | 316 | 135 | 4 | 20 | 302 | 41 | 355 | 3.43e-92 | 278 |
MS.gene61027.t1 | AT5G07000 | 44.410 | 322 | 142 | 5 | 17 | 302 | 24 | 344 | 1.13e-91 | 276 |
MS.gene61027.t1 | AT3G45080 | 46.057 | 317 | 136 | 4 | 20 | 302 | 14 | 329 | 1.80e-86 | 262 |
MS.gene61027.t1 | AT2G03770 | 42.284 | 324 | 147 | 3 | 12 | 303 | 8 | 323 | 2.51e-86 | 262 |
MS.gene61027.t1 | AT1G13420 | 44.695 | 311 | 133 | 6 | 26 | 302 | 26 | 331 | 3.70e-80 | 246 |
MS.gene61027.t1 | AT1G28170 | 42.424 | 330 | 152 | 7 | 7 | 302 | 1 | 326 | 3.55e-78 | 241 |
MS.gene61027.t1 | AT5G43690 | 41.124 | 338 | 156 | 7 | 1 | 302 | 1 | 331 | 7.83e-78 | 240 |
MS.gene61027.t1 | AT2G03750 | 40.867 | 323 | 157 | 5 | 12 | 302 | 30 | 350 | 2.39e-77 | 240 |
MS.gene61027.t1 | AT4G26280 | 41.824 | 318 | 133 | 4 | 16 | 299 | 7 | 306 | 5.33e-76 | 235 |
MS.gene61027.t1 | AT1G18590 | 41.083 | 314 | 140 | 7 | 26 | 300 | 34 | 341 | 7.19e-74 | 231 |
MS.gene61027.t1 | AT2G14920 | 39.936 | 313 | 151 | 4 | 26 | 302 | 22 | 333 | 4.61e-72 | 226 |
MS.gene61027.t1 | AT1G74100 | 38.535 | 314 | 148 | 6 | 26 | 300 | 26 | 333 | 6.13e-71 | 223 |
MS.gene61027.t1 | AT2G27570 | 40.461 | 304 | 124 | 4 | 16 | 302 | 10 | 273 | 4.12e-70 | 219 |
MS.gene61027.t1 | AT1G13430 | 38.532 | 327 | 150 | 5 | 26 | 302 | 26 | 351 | 7.31e-70 | 221 |
MS.gene61027.t1 | AT1G74090 | 38.854 | 314 | 147 | 6 | 26 | 300 | 38 | 345 | 1.73e-68 | 217 |
Find 57 sgRNAs with CRISPR-Local
Find 79 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATTCTCTTGTTCCCTTCT+TGG | 0.032882 | 8.1:-38130558 | MS.gene61027:CDS |
TCCATCAATACCAAGGATTT+TGG | 0.169594 | 8.1:-38130757 | MS.gene61027:CDS |
GTTGACTCTTTCACAGAATT+TGG | 0.172783 | 8.1:+38130440 | None:intergenic |
ACCTTTGGATTCTTCTTCTT+TGG | 0.195487 | 8.1:+38130127 | None:intergenic |
TCGTATTCTTGCAAGTATTT+TGG | 0.197192 | 8.1:+38130848 | None:intergenic |
GTATCAATTCCTTGCATTCT+TGG | 0.204814 | 8.1:+38130819 | None:intergenic |
AGCCAAGTGGTACCTGCTTT+TGG | 0.223091 | 8.1:+38130662 | None:intergenic |
CACTATCACTGAAAGTAAAT+TGG | 0.250645 | 8.1:-38130021 | MS.gene61027:CDS |
TGCGAAACAAAAGTGTCTTT+TGG | 0.289441 | 8.1:+38130389 | None:intergenic |
TGTAGAGGCGCGAGTTCTTT+TGG | 0.290285 | 8.1:-38130293 | MS.gene61027:CDS |
CCCACATTGCCATTAGAAAA+AGG | 0.310786 | 8.1:-38130797 | MS.gene61027:CDS |
GGGAGCATGTATTGGGATAT+TGG | 0.323106 | 8.1:-38130262 | MS.gene61027:CDS |
GCCAAAATCCTTGGTATTGA+TGG | 0.341469 | 8.1:+38130756 | None:intergenic |
CAATATCTTTGTCATAATAA+AGG | 0.348160 | 8.1:+38130528 | None:intergenic |
TACTTGCAAGAATACGATTT+AGG | 0.377772 | 8.1:-38130842 | MS.gene61027:CDS |
GAATTTGGCAATAATTCATA+TGG | 0.378063 | 8.1:+38130455 | None:intergenic |
CTCTCGAAAGCTTCTTGTAA+TGG | 0.429331 | 8.1:+38130320 | None:intergenic |
GGGATATTGGAAGGAAAGCT+TGG | 0.445940 | 8.1:-38130249 | MS.gene61027:CDS |
TGCAATCTCCAACTTGGCCT+AGG | 0.445986 | 8.1:+38130081 | None:intergenic |
CAAGAAGGGAACAAGAGAAT+GGG | 0.448312 | 8.1:+38130559 | None:intergenic |
GGGAACAAGAGAATGGGGAT+TGG | 0.451880 | 8.1:+38130565 | None:intergenic |
ATATGTGTAGAGAAGAGTCT+TGG | 0.476489 | 8.1:+38130479 | None:intergenic |
CCAAGAAGGGAACAAGAGAA+TGG | 0.483836 | 8.1:+38130558 | None:intergenic |
GGTGACAATGAGTCGAGATC+GGG | 0.492080 | 8.1:+38130503 | None:intergenic |
AGAAGAAGAATCCAAAGGTA+TGG | 0.503198 | 8.1:-38130123 | MS.gene61027:CDS |
TGTGTAGAGAAGAGTCTTGG+AGG | 0.507788 | 8.1:+38130482 | None:intergenic |
GGATGGTTGTTATGAATGCT+TGG | 0.509541 | 8.1:+38130599 | None:intergenic |
CCCAATACATGCTCCCAAAA+CGG | 0.522995 | 8.1:+38130269 | None:intergenic |
AGTGGTAACTAAGAGAATAT+CGG | 0.530021 | 8.1:+38130685 | None:intergenic |
CTCCAAAAGCAGGTACCACT+TGG | 0.530830 | 8.1:-38130664 | MS.gene61027:CDS |
AGGTGACAATGAGTCGAGAT+CGG | 0.533708 | 8.1:+38130502 | None:intergenic |
TGGGGATTGGAAGTGAGTAA+AGG | 0.540519 | 8.1:+38130578 | None:intergenic |
GTACCACTTGGCTCAAAGCA+TGG | 0.551523 | 8.1:-38130652 | MS.gene61027:CDS |
TTGTGGCAAGCCAAAATCCT+TGG | 0.564001 | 8.1:+38130747 | None:intergenic |
ATAAAGGTCATACTCCAAGA+AGG | 0.564290 | 8.1:+38130544 | None:intergenic |
CGATTTAGGCCAAGAATGCA+AGG | 0.571635 | 8.1:-38130828 | MS.gene61027:CDS |
TTAGTTACCACTCCAAAAGC+AGG | 0.574786 | 8.1:-38130674 | MS.gene61027:CDS |
TTTGACAAGATAAAACACCT+TGG | 0.581098 | 8.1:+38130717 | None:intergenic |
GCATGTATTGGGATATTGGA+AGG | 0.583242 | 8.1:-38130258 | MS.gene61027:CDS |
TAAAGGTCATACTCCAAGAA+GGG | 0.588647 | 8.1:+38130545 | None:intergenic |
AAGCTAAGAGCACAAAGTAG+AGG | 0.594141 | 8.1:-38130350 | MS.gene61027:CDS |
AAGCTTGGAAAGGCCAGAGA+AGG | 0.595580 | 8.1:-38130234 | MS.gene61027:CDS |
GAAAGTAAATTGGCTACACA+TGG | 0.597619 | 8.1:-38130011 | MS.gene61027:CDS |
GAATGCTTGGATATTTGTTG+CGG | 0.608390 | 8.1:+38130612 | None:intergenic |
TGTGAAAGAGTCAACTTGCA+AGG | 0.618089 | 8.1:-38130432 | MS.gene61027:CDS |
CTTGCCACAAGGATTCTCCA+AGG | 0.641069 | 8.1:-38130734 | MS.gene61027:CDS |
AAGAAGGGAACAAGAGAATG+GGG | 0.641846 | 8.1:+38130560 | None:intergenic |
AATCTCCAACTTGGCCTAGG+CGG | 0.642233 | 8.1:+38130084 | None:intergenic |
GATTGGAAGTGAGTAAAGGA+TGG | 0.644416 | 8.1:+38130582 | None:intergenic |
AGTCCATGCTTTGAGCCAAG+TGG | 0.645676 | 8.1:+38130649 | None:intergenic |
TCCTACTTCCATCAATACCA+AGG | 0.653031 | 8.1:-38130764 | MS.gene61027:CDS |
TCCTTGGTATTGATGGAAGT+AGG | 0.653788 | 8.1:+38130763 | None:intergenic |
TCCAAAGAAGAAGAATCCAA+AGG | 0.663515 | 8.1:-38130128 | MS.gene61027:CDS |
AACACCTTGGAGAATCCTTG+TGG | 0.666075 | 8.1:+38130730 | None:intergenic |
ATTGGAAGGAAAGCTTGGAA+AGG | 0.672349 | 8.1:-38130244 | MS.gene61027:CDS |
AAAGTAAATTGGCTACACAT+GGG | 0.678157 | 8.1:-38130010 | MS.gene61027:CDS |
GAAAGAGTCAACTTGCAAGG+TGG | 0.777827 | 8.1:-38130429 | MS.gene61027:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATCTCTTTCAAATAAAAACT+AGG | + | chr8.1:38130703-38130722 | None:intergenic | 20.0% |
!! | CAATATCTTTGTCATAATAA+AGG | + | chr8.1:38130351-38130370 | None:intergenic | 20.0% |
! | GAATTTGGCAATAATTCATA+TGG | + | chr8.1:38130424-38130443 | None:intergenic | 25.0% |
!! | AAAGAGATTGCTAAGTTTTT+GGG | - | chr8.1:38130715-38130734 | MS.gene61027:CDS | 25.0% |
AAAGTAAATTGGCTACACAT+GGG | - | chr8.1:38130866-38130885 | MS.gene61027:CDS | 30.0% | |
AGTGGTAACTAAGAGAATAT+CGG | + | chr8.1:38130194-38130213 | None:intergenic | 30.0% | |
CACTATCACTGAAAGTAAAT+TGG | - | chr8.1:38130855-38130874 | MS.gene61027:CDS | 30.0% | |
TACTTGCAAGAATACGATTT+AGG | - | chr8.1:38130034-38130053 | MS.gene61027:CDS | 30.0% | |
TTTGACAAGATAAAACACCT+TGG | + | chr8.1:38130162-38130181 | None:intergenic | 30.0% | |
! | GAAAGAGATTGCTAAGTTTT+TGG | - | chr8.1:38130714-38130733 | MS.gene61027:CDS | 30.0% |
! | GTAATCCATCCTTTTTCTAA+TGG | + | chr8.1:38130091-38130110 | None:intergenic | 30.0% |
! | TCGTATTCTTGCAAGTATTT+TGG | + | chr8.1:38130031-38130050 | None:intergenic | 30.0% |
!! | GTATTTGTTTTCCATACCTT+TGG | + | chr8.1:38130767-38130786 | None:intergenic | 30.0% |
ACCTTTGGATTCTTCTTCTT+TGG | + | chr8.1:38130752-38130771 | None:intergenic | 35.0% | |
AGAAGAAGAATCCAAAGGTA+TGG | - | chr8.1:38130753-38130772 | MS.gene61027:CDS | 35.0% | |
ATAAAGGTCATACTCCAAGA+AGG | + | chr8.1:38130335-38130354 | None:intergenic | 35.0% | |
ATATGTGTAGAGAAGAGTCT+TGG | + | chr8.1:38130400-38130419 | None:intergenic | 35.0% | |
CATTGCCATTAGAAAAAGGA+TGG | - | chr8.1:38130083-38130102 | MS.gene61027:CDS | 35.0% | |
GAAAGTAAATTGGCTACACA+TGG | - | chr8.1:38130865-38130884 | MS.gene61027:CDS | 35.0% | |
GTATCAATTCCTTGCATTCT+TGG | + | chr8.1:38130060-38130079 | None:intergenic | 35.0% | |
TAAAGGTCATACTCCAAGAA+GGG | + | chr8.1:38130334-38130353 | None:intergenic | 35.0% | |
TCCAAAGAAGAAGAATCCAA+AGG | - | chr8.1:38130748-38130767 | MS.gene61027:CDS | 35.0% | |
TGCAAAAATGTTCTCACAAC+TGG | - | chr8.1:38130814-38130833 | MS.gene61027:CDS | 35.0% | |
TTCAAAAACATCACCTTCTC+TGG | + | chr8.1:38130658-38130677 | None:intergenic | 35.0% | |
! | CATTTTTGCAATCTCCAACT+TGG | + | chr8.1:38130804-38130823 | None:intergenic | 35.0% |
! | CCTTTTTCTAATGGCAATGT+GGG | + | chr8.1:38130082-38130101 | None:intergenic | 35.0% |
! | GAATGCTTGGATATTTGTTG+CGG | + | chr8.1:38130267-38130286 | None:intergenic | 35.0% |
! | GTTGACTCTTTCACAGAATT+TGG | + | chr8.1:38130439-38130458 | None:intergenic | 35.0% |
! | TCCATCAATACCAAGGATTT+TGG | - | chr8.1:38130119-38130138 | MS.gene61027:CDS | 35.0% |
! | TCCTTTTTCTAATGGCAATG+TGG | + | chr8.1:38130083-38130102 | None:intergenic | 35.0% |
!! | AAGACACTTTTGTTTCGCAT+TGG | - | chr8.1:38130491-38130510 | MS.gene61027:CDS | 35.0% |
!!! | AACAAATACTTTTTCCGCCT+AGG | - | chr8.1:38130778-38130797 | MS.gene61027:CDS | 35.0% |
!!! | ATTGCTAAGTTTTTGGGTTG+TGG | - | chr8.1:38130721-38130740 | MS.gene61027:CDS | 35.0% |
!!! | TGCGAAACAAAAGTGTCTTT+TGG | + | chr8.1:38130490-38130509 | None:intergenic | 35.0% |
AAGAAGGGAACAAGAGAATG+GGG | + | chr8.1:38130319-38130338 | None:intergenic | 40.0% | |
ATTGGAAGGAAAGCTTGGAA+AGG | - | chr8.1:38130632-38130651 | MS.gene61027:CDS | 40.0% | |
CAAGAAGGGAACAAGAGAAT+GGG | + | chr8.1:38130320-38130339 | None:intergenic | 40.0% | |
CCCACATTGCCATTAGAAAA+AGG | - | chr8.1:38130079-38130098 | MS.gene61027:CDS | 40.0% | |
CTCTCGAAAGCTTCTTGTAA+TGG | + | chr8.1:38130559-38130578 | None:intergenic | 40.0% | |
GATTGGAAGTGAGTAAAGGA+TGG | + | chr8.1:38130297-38130316 | None:intergenic | 40.0% | |
GCATGTATTGGGATATTGGA+AGG | - | chr8.1:38130618-38130637 | MS.gene61027:CDS | 40.0% | |
GGATGGTTGTTATGAATGCT+TGG | + | chr8.1:38130280-38130299 | None:intergenic | 40.0% | |
TCCTACTTCCATCAATACCA+AGG | - | chr8.1:38130112-38130131 | MS.gene61027:CDS | 40.0% | |
TGTGAAAGAGTCAACTTGCA+AGG | - | chr8.1:38130444-38130463 | MS.gene61027:CDS | 40.0% | |
TTAGTTACCACTCCAAAAGC+AGG | - | chr8.1:38130202-38130221 | MS.gene61027:CDS | 40.0% | |
! | AAGCTAAGAGCACAAAGTAG+AGG | - | chr8.1:38130526-38130545 | MS.gene61027:CDS | 40.0% |
! | GAGTTCTTTTGGACCGTTTT+GGG | - | chr8.1:38130594-38130613 | MS.gene61027:CDS | 40.0% |
! | GCCAAAATCCTTGGTATTGA+TGG | + | chr8.1:38130123-38130142 | None:intergenic | 40.0% |
! | GCTTTCGAGAGTTTTTGTAG+AGG | - | chr8.1:38130568-38130587 | MS.gene61027:CDS | 40.0% |
!! | TCCTTGGTATTGATGGAAGT+AGG | + | chr8.1:38130116-38130135 | None:intergenic | 40.0% |
AACACCTTGGAGAATCCTTG+TGG | + | chr8.1:38130149-38130168 | None:intergenic | 45.0% | |
AGGTGACAATGAGTCGAGAT+CGG | + | chr8.1:38130377-38130396 | None:intergenic | 45.0% | |
CCAAGAAGGGAACAAGAGAA+TGG | + | chr8.1:38130321-38130340 | None:intergenic | 45.0% | |
CCATTCTCTTGTTCCCTTCT+TGG | - | chr8.1:38130318-38130337 | MS.gene61027:CDS | 45.0% | |
CCCAATACATGCTCCCAAAA+CGG | + | chr8.1:38130610-38130629 | None:intergenic | 45.0% | |
CGATTTAGGCCAAGAATGCA+AGG | - | chr8.1:38130048-38130067 | MS.gene61027:CDS | 45.0% | |
GAAAGAGTCAACTTGCAAGG+TGG | - | chr8.1:38130447-38130466 | MS.gene61027:CDS | 45.0% | |
GGGATATTGGAAGGAAAGCT+TGG | - | chr8.1:38130627-38130646 | MS.gene61027:CDS | 45.0% | |
TGGGGATTGGAAGTGAGTAA+AGG | + | chr8.1:38130301-38130320 | None:intergenic | 45.0% | |
TGTGTAGAGAAGAGTCTTGG+AGG | + | chr8.1:38130397-38130416 | None:intergenic | 45.0% | |
TTGTGGCAAGCCAAAATCCT+TGG | + | chr8.1:38130132-38130151 | None:intergenic | 45.0% | |
! | CGAGTTCTTTTGGACCGTTT+TGG | - | chr8.1:38130593-38130612 | MS.gene61027:CDS | 45.0% |
! | GGGAGCATGTATTGGGATAT+TGG | - | chr8.1:38130614-38130633 | MS.gene61027:CDS | 45.0% |
!!! | AAGGATTTTGGCTTGCCACA+AGG | - | chr8.1:38130131-38130150 | MS.gene61027:CDS | 45.0% |
!!! | ACCGTTTTGGGAGCATGTAT+TGG | - | chr8.1:38130606-38130625 | MS.gene61027:CDS | 45.0% |
!!! | CCGTTTTGGGAGCATGTATT+GGG | - | chr8.1:38130607-38130626 | MS.gene61027:CDS | 45.0% |
AAGCTTGGAAAGGCCAGAGA+AGG | - | chr8.1:38130642-38130661 | MS.gene61027:CDS | 50.0% | |
AATCTCCAACTTGGCCTAGG+CGG | + | chr8.1:38130795-38130814 | None:intergenic | 50.0% | |
CTCCAAAAGCAGGTACCACT+TGG | - | chr8.1:38130212-38130231 | MS.gene61027:CDS | 50.0% | |
CTTGCCACAAGGATTCTCCA+AGG | - | chr8.1:38130142-38130161 | MS.gene61027:CDS | 50.0% | |
GGGAACAAGAGAATGGGGAT+TGG | + | chr8.1:38130314-38130333 | None:intergenic | 50.0% | |
GGTGACAATGAGTCGAGATC+GGG | + | chr8.1:38130376-38130395 | None:intergenic | 50.0% | |
GTACCACTTGGCTCAAAGCA+TGG | - | chr8.1:38130224-38130243 | MS.gene61027:CDS | 50.0% | |
TGCAATCTCCAACTTGGCCT+AGG | + | chr8.1:38130798-38130817 | None:intergenic | 50.0% | |
! | AGCCAAGTGGTACCTGCTTT+TGG | + | chr8.1:38130217-38130236 | None:intergenic | 50.0% |
! | AGTCCATGCTTTGAGCCAAG+TGG | + | chr8.1:38130230-38130249 | None:intergenic | 50.0% |
! | TTTTTCCGCCTAGGCCAAGT+TGG | - | chr8.1:38130787-38130806 | MS.gene61027:CDS | 50.0% |
!! | AGTGGTACCTGCTTTTGGAG+TGG | + | chr8.1:38130212-38130231 | None:intergenic | 50.0% |
!! | TGTAGAGGCGCGAGTTCTTT+TGG | - | chr8.1:38130583-38130602 | MS.gene61027:CDS | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 38129992 | 38130906 | 38129992 | ID=MS.gene61027 |
chr8.1 | mRNA | 38129992 | 38130906 | 38129992 | ID=MS.gene61027.t1;Parent=MS.gene61027 |
chr8.1 | exon | 38129992 | 38130906 | 38129992 | ID=MS.gene61027.t1.exon1;Parent=MS.gene61027.t1 |
chr8.1 | CDS | 38129992 | 38130906 | 38129992 | ID=cds.MS.gene61027.t1;Parent=MS.gene61027.t1 |
Gene Sequence |
Protein sequence |