Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61637.t1 | XP_003605980.1 | 99.7 | 366 | 1 | 0 | 1 | 366 | 51 | 416 | 1.00E-168 | 602.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61637.t1 | P43644 | 74.7 | 368 | 90 | 2 | 1 | 366 | 51 | 417 | 1.1e-150 | 534.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61637.t1 | G7JES3 | 99.7 | 366 | 1 | 0 | 1 | 366 | 51 | 416 | 7.5e-169 | 602.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene61637 | 0.808231 | 3.43E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61637.t1 | MTR_4g050420 | 99.727 | 366 | 1 | 0 | 1 | 366 | 51 | 416 | 0.0 | 754 |
| MS.gene61637.t1 | MTR_2g087660 | 88.076 | 369 | 39 | 3 | 1 | 366 | 51 | 417 | 0.0 | 619 |
| MS.gene61637.t1 | MTR_8g006430 | 68.817 | 372 | 110 | 4 | 1 | 366 | 52 | 423 | 1.87e-175 | 494 |
| MS.gene61637.t1 | MTR_2g087660 | 88.302 | 265 | 27 | 2 | 1 | 262 | 51 | 314 | 1.89e-149 | 425 |
| MS.gene61637.t1 | MTR_7g109340 | 35.831 | 307 | 165 | 7 | 1 | 306 | 68 | 343 | 5.97e-45 | 158 |
| MS.gene61637.t1 | MTR_2g104030 | 28.841 | 371 | 236 | 11 | 1 | 352 | 111 | 472 | 2.29e-36 | 138 |
| MS.gene61637.t1 | MTR_4g078850 | 30.159 | 315 | 193 | 8 | 1 | 306 | 47 | 343 | 2.35e-36 | 135 |
| MS.gene61637.t1 | MTR_2g014470 | 31.013 | 316 | 184 | 8 | 1 | 306 | 47 | 338 | 6.92e-36 | 134 |
| MS.gene61637.t1 | MTR_6g471050 | 30.435 | 322 | 199 | 10 | 1 | 304 | 22 | 336 | 2.60e-34 | 131 |
| MS.gene61637.t1 | MTR_3g087030 | 32.362 | 309 | 195 | 8 | 1 | 303 | 123 | 423 | 2.73e-34 | 131 |
| MS.gene61637.t1 | MTR_4g023470 | 31.290 | 310 | 175 | 9 | 1 | 295 | 128 | 414 | 7.76e-34 | 130 |
| MS.gene61637.t1 | MTR_2g090705 | 30.380 | 316 | 182 | 7 | 1 | 306 | 47 | 334 | 8.85e-34 | 128 |
| MS.gene61637.t1 | MTR_4g015840 | 29.377 | 337 | 162 | 10 | 1 | 306 | 47 | 338 | 5.53e-31 | 120 |
| MS.gene61637.t1 | MTR_2g014480 | 31.773 | 299 | 181 | 10 | 1 | 291 | 47 | 330 | 4.47e-29 | 115 |
| MS.gene61637.t1 | MTR_3g108020 | 28.025 | 314 | 183 | 5 | 1 | 306 | 47 | 325 | 2.94e-27 | 110 |
| MS.gene61637.t1 | MTR_5g037880 | 35.172 | 145 | 92 | 1 | 162 | 306 | 132 | 274 | 5.93e-27 | 108 |
| MS.gene61637.t1 | MTR_4g015840 | 36.232 | 138 | 86 | 1 | 169 | 306 | 126 | 261 | 1.50e-24 | 101 |
| MS.gene61637.t1 | MTR_3g027580 | 27.687 | 307 | 187 | 12 | 1 | 295 | 131 | 414 | 1.69e-24 | 104 |
| MS.gene61637.t1 | MTR_3g437840 | 35.461 | 141 | 89 | 1 | 166 | 306 | 23 | 161 | 5.75e-23 | 94.4 |
| MS.gene61637.t1 | MTR_4g023490 | 28.481 | 316 | 199 | 11 | 1 | 303 | 57 | 358 | 4.66e-19 | 87.8 |
| MS.gene61637.t1 | MTR_3g088140 | 33.793 | 145 | 93 | 2 | 163 | 306 | 211 | 353 | 4.36e-18 | 84.7 |
| MS.gene61637.t1 | MTR_5g065160 | 25.159 | 314 | 196 | 10 | 1 | 298 | 125 | 415 | 3.70e-17 | 82.8 |
| MS.gene61637.t1 | MTR_5g065160 | 25.159 | 314 | 196 | 10 | 1 | 298 | 124 | 414 | 3.83e-17 | 82.8 |
| MS.gene61637.t1 | MTR_5g065160 | 25.478 | 314 | 195 | 11 | 1 | 298 | 118 | 408 | 4.48e-17 | 82.8 |
| MS.gene61637.t1 | MTR_5g065160 | 25.478 | 314 | 195 | 11 | 1 | 298 | 125 | 415 | 5.66e-17 | 82.4 |
| MS.gene61637.t1 | MTR_2g006890 | 31.250 | 144 | 98 | 1 | 163 | 306 | 233 | 375 | 4.44e-16 | 79.3 |
| MS.gene61637.t1 | MTR_3g437360 | 30.159 | 126 | 86 | 2 | 162 | 287 | 211 | 334 | 1.58e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61637.t1 | AT5G22060 | 82.432 | 370 | 59 | 4 | 1 | 366 | 52 | 419 | 0.0 | 604 |
| MS.gene61637.t1 | AT3G44110 | 85.175 | 371 | 48 | 4 | 1 | 366 | 52 | 420 | 0.0 | 589 |
| MS.gene61637.t1 | AT3G44110 | 88.968 | 281 | 28 | 2 | 1 | 279 | 52 | 331 | 9.23e-167 | 469 |
| MS.gene61637.t1 | AT3G62600 | 35.370 | 311 | 163 | 9 | 1 | 306 | 68 | 345 | 3.24e-44 | 156 |
| MS.gene61637.t1 | AT2G20560 | 31.392 | 309 | 190 | 6 | 1 | 306 | 47 | 336 | 2.67e-38 | 140 |
| MS.gene61637.t1 | AT1G80030 | 28.732 | 355 | 227 | 10 | 1 | 338 | 116 | 461 | 1.30e-36 | 139 |
| MS.gene61637.t1 | AT1G80030 | 28.732 | 355 | 227 | 10 | 1 | 338 | 116 | 461 | 1.88e-36 | 138 |
| MS.gene61637.t1 | AT1G80030 | 28.732 | 355 | 227 | 10 | 1 | 338 | 116 | 461 | 1.88e-36 | 138 |
| MS.gene61637.t1 | AT1G80030 | 28.732 | 355 | 227 | 10 | 1 | 338 | 116 | 461 | 1.88e-36 | 138 |
| MS.gene61637.t1 | AT5G48030 | 31.833 | 311 | 184 | 11 | 1 | 298 | 136 | 431 | 3.98e-35 | 134 |
| MS.gene61637.t1 | AT2G22360 | 30.606 | 330 | 209 | 8 | 1 | 326 | 127 | 440 | 2.27e-33 | 129 |
| MS.gene61637.t1 | AT4G28480 | 28.526 | 312 | 206 | 6 | 1 | 306 | 47 | 347 | 1.49e-32 | 125 |
| MS.gene61637.t1 | AT5G01390 | 29.305 | 331 | 165 | 10 | 1 | 306 | 47 | 333 | 9.13e-32 | 122 |
| MS.gene61637.t1 | AT4G39960 | 29.739 | 306 | 197 | 7 | 1 | 295 | 126 | 424 | 2.62e-31 | 123 |
| MS.gene61637.t1 | AT4G39960 | 29.739 | 306 | 197 | 7 | 1 | 295 | 126 | 424 | 2.62e-31 | 123 |
| MS.gene61637.t1 | AT5G25530 | 29.781 | 319 | 183 | 9 | 1 | 306 | 47 | 337 | 6.92e-31 | 120 |
| MS.gene61637.t1 | AT3G08910 | 28.483 | 323 | 165 | 8 | 1 | 306 | 47 | 320 | 2.35e-30 | 118 |
| MS.gene61637.t1 | AT1G59725 | 29.545 | 308 | 188 | 8 | 1 | 306 | 48 | 328 | 1.10e-29 | 117 |
| MS.gene61637.t1 | AT1G10350 | 28.788 | 330 | 181 | 10 | 1 | 306 | 47 | 346 | 1.66e-29 | 117 |
| MS.gene61637.t1 | AT5G25530 | 29.052 | 327 | 183 | 10 | 1 | 306 | 47 | 345 | 3.98e-28 | 113 |
| MS.gene61637.t1 | AT2G20550 | 37.931 | 145 | 88 | 1 | 162 | 306 | 141 | 283 | 6.26e-27 | 108 |
| MS.gene61637.t1 | AT2G20550 | 37.931 | 145 | 88 | 1 | 162 | 306 | 141 | 283 | 6.26e-27 | 108 |
| MS.gene61637.t1 | AT3G17830 | 29.073 | 313 | 195 | 8 | 1 | 295 | 104 | 407 | 6.28e-27 | 112 |
| MS.gene61637.t1 | AT3G47940 | 29.952 | 207 | 128 | 2 | 100 | 306 | 157 | 346 | 2.23e-26 | 108 |
| MS.gene61637.t1 | AT1G28210 | 27.356 | 329 | 202 | 10 | 1 | 316 | 90 | 394 | 7.06e-25 | 104 |
| MS.gene61637.t1 | AT1G28210 | 27.356 | 329 | 202 | 10 | 1 | 316 | 90 | 394 | 8.00e-25 | 104 |
| MS.gene61637.t1 | AT1G28210 | 27.356 | 329 | 202 | 10 | 1 | 316 | 90 | 394 | 8.68e-25 | 105 |
| MS.gene61637.t1 | AT4G28480 | 35.374 | 147 | 91 | 2 | 160 | 306 | 147 | 289 | 1.02e-23 | 99.8 |
| MS.gene61637.t1 | AT5G01390 | 35.507 | 138 | 87 | 1 | 169 | 306 | 140 | 275 | 2.19e-23 | 98.6 |
| MS.gene61637.t1 | AT1G11040 | 34.722 | 144 | 92 | 1 | 163 | 306 | 291 | 432 | 5.72e-18 | 85.1 |
| MS.gene61637.t1 | AT1G44160 | 31.111 | 135 | 91 | 1 | 172 | 306 | 221 | 353 | 1.31e-15 | 77.8 |
Find 112 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATCTTCTCGTCTTTCTT+TGG | 0.252245 | 4.1:+47484093 | MS.gene61637:CDS |
| TACAGCAAAGGTTCTAAATC+TGG | 0.260581 | 4.1:+47485639 | MS.gene61637:intron |
| TCATCCTCTCAAGGTCTCTT+TGG | 0.272658 | 4.1:+47484261 | MS.gene61637:CDS |
| GGAATGGGTGGTGGAGGTGG+TGG | 0.281696 | 4.1:+47484054 | MS.gene61637:CDS |
| ATGGGTGGTGGAGGTGGTGG+TGG | 0.291168 | 4.1:+47484057 | MS.gene61637:CDS |
| TAAAGCTTGCCCTTCATAAA+TGG | 0.299708 | 4.1:-47486492 | None:intergenic |
| CCAAGTGAGTAAGCACAAAT+TGG | 0.314955 | 4.1:-47486138 | None:intergenic |
| TTGACAACCAGCACATTTCA+TGG | 0.323834 | 4.1:-47485667 | None:intergenic |
| CCAATTTGTGCTTACTCACT+TGG | 0.343644 | 4.1:+47486138 | MS.gene61637:CDS |
| GAAGGAATGGGTGGTGGAGG+TGG | 0.349343 | 4.1:+47484051 | MS.gene61637:CDS |
| TTGCAGCCAGACACAGTTAC+TGG | 0.349899 | 4.1:+47486007 | MS.gene61637:intron |
| TGATCAGGTGAAAGGTTTGC+AGG | 0.350853 | 4.1:+47486554 | MS.gene61637:CDS |
| TACACTTCATGATGTCAATA+TGG | 0.351289 | 4.1:+47486641 | MS.gene61637:CDS |
| GAAACAGCAGCAACAGCAAC+AGG | 0.363476 | 4.1:+47486680 | MS.gene61637:CDS |
| ATCATAAATCTCACGCTTCT+CGG | 0.368254 | 4.1:-47484004 | None:intergenic |
| ATATGGTGAGGATGCTCTTA+AGG | 0.394161 | 4.1:+47484029 | MS.gene61637:CDS |
| TCAATATGGAAGAGGAGAAT+AGG | 0.410593 | 4.1:+47486655 | MS.gene61637:CDS |
| TGAACAGGTGGTGGTGGTGG+TGG | 0.412145 | 4.1:+47484196 | MS.gene61637:intron |
| TGCATTTGCTGAATCATTGA+TGG | 0.413239 | 4.1:-47485726 | None:intergenic |
| TCCTCTCAAGGTCTCTTTGG+AGG | 0.418220 | 4.1:+47484264 | MS.gene61637:CDS |
| CTTTGGAGGACCTTTACCTT+GGG | 0.425643 | 4.1:+47484278 | MS.gene61637:CDS |
| AAAGACGAGAAGATGTCAAA+TGG | 0.431223 | 4.1:-47484087 | None:intergenic |
| AGAGCTAGCACAAGCTTATG+AGG | 0.435011 | 4.1:+47483969 | MS.gene61637:CDS |
| GCATCCTTGTAACGAATGTA+AGG | 0.439570 | 4.1:+47485749 | MS.gene61637:CDS |
| ACAGTGTGTGCTCTACAAAA+AGG | 0.442437 | 4.1:-47486090 | None:intergenic |
| TGATCAAGACTTAGAGTGTC+GGG | 0.443069 | 4.1:-47486537 | None:intergenic |
| TCATAAATCTCACGCTTCTC+GGG | 0.449565 | 4.1:-47484003 | None:intergenic |
| ACAGCAAAGGTTCTAAATCT+GGG | 0.455064 | 4.1:+47485640 | MS.gene61637:intron |
| AAGGAAGGAATGGGTGGTGG+AGG | 0.459284 | 4.1:+47484048 | MS.gene61637:CDS |
| ATAAATGGCCTCTGGTACAT+CGG | 0.461071 | 4.1:-47486477 | None:intergenic |
| ATATCCCCAGTAACTGTGTC+TGG | 0.462941 | 4.1:-47486013 | None:intergenic |
| ACCAGGCTTGACAACTTCTC+CGG | 0.467557 | 4.1:-47486191 | None:intergenic |
| CACGTCTCTGCCTCCGTCCT+CGG | 0.470973 | 4.1:-47484225 | None:intergenic |
| AATTGTGATGAAGGTTTAGC+TGG | 0.472131 | 4.1:-47486585 | None:intergenic |
| TCTTTGGAGGACCTTTACCT+TGG | 0.474255 | 4.1:+47484277 | MS.gene61637:CDS |
| ATGTCTGTCAATTGTGATGA+AGG | 0.480120 | 4.1:-47486594 | None:intergenic |
| TGCAGCCAGACACAGTTACT+GGG | 0.483778 | 4.1:+47486008 | MS.gene61637:intron |
| GTATGAACAGGTGGTGGTGG+TGG | 0.487493 | 4.1:+47484193 | MS.gene61637:intron |
| TGCCCTTCATAAATGGCCTC+TGG | 0.489076 | 4.1:-47486485 | None:intergenic |
| CGTGAGATTTATGATACATA+TGG | 0.491353 | 4.1:+47484012 | MS.gene61637:CDS |
| TCTTAGATGTCCCAAGGTAA+AGG | 0.493685 | 4.1:-47484288 | None:intergenic |
| TGTACCCTCTGTGCCCCACC+AGG | 0.495428 | 4.1:-47486729 | None:intergenic |
| CGACACTCTAAGTCTTGATC+AGG | 0.498606 | 4.1:+47486539 | MS.gene61637:CDS |
| GTACCAGAGGCCATTTATGA+AGG | 0.504857 | 4.1:+47486482 | MS.gene61637:CDS |
| GTACCCTTACATTCGTTACA+AGG | 0.505592 | 4.1:-47485753 | None:intergenic |
| CCAGGCTTGACAACTTCTCC+GGG | 0.508832 | 4.1:-47486190 | None:intergenic |
| GGTTCGATTTGATAAGAAGT+TGG | 0.509723 | 4.1:-47486168 | None:intergenic |
| CCCGGAGAAGTTGTCAAGCC+TGG | 0.510330 | 4.1:+47486190 | MS.gene61637:CDS |
| CTTGAAGTTCATGTCGAGAA+AGG | 0.510906 | 4.1:+47485849 | MS.gene61637:CDS |
| CTTAAGGAAGGAATGGGTGG+TGG | 0.513608 | 4.1:+47484045 | MS.gene61637:CDS |
| GGGGCTTCCATGAAATGTGC+TGG | 0.516637 | 4.1:+47485660 | MS.gene61637:CDS |
| TTGTCAAGGAACTGGTATGA+AGG | 0.522018 | 4.1:+47485683 | MS.gene61637:CDS |
| GGATGCTCTTAAGGAAGGAA+TGG | 0.523255 | 4.1:+47484038 | MS.gene61637:CDS |
| TGTGCTGGTTGTCAAGGAAC+TGG | 0.527018 | 4.1:+47485675 | MS.gene61637:CDS |
| CTTGTATGAACAGGTGGTGG+TGG | 0.530748 | 4.1:+47484190 | MS.gene61637:intron |
| CTAAGTCTTGATCAGGTGAA+AGG | 0.533754 | 4.1:+47486546 | MS.gene61637:CDS |
| AGACCGCTGTCCACAGTGCA+AGG | 0.534307 | 4.1:+47485797 | MS.gene61637:CDS |
| AAGACGAGAAGATGTCAAAT+GGG | 0.536873 | 4.1:-47484086 | None:intergenic |
| AAGGTTTCTATTAGACACCT+TGG | 0.545121 | 4.1:+47485702 | MS.gene61637:CDS |
| GATGCTCTTAAGGAAGGAAT+GGG | 0.551678 | 4.1:+47484039 | MS.gene61637:CDS |
| TGTAACGAATGTAAGGGTAC+TGG | 0.556933 | 4.1:+47485756 | MS.gene61637:CDS |
| AGTCAGAAGATTACATTCCC+TGG | 0.557761 | 4.1:+47485882 | MS.gene61637:CDS |
| TTTGTGCTTACTCACTTGGA+TGG | 0.559690 | 4.1:+47486142 | MS.gene61637:CDS |
| TCATGATGTCAATATGGAAG+AGG | 0.561923 | 4.1:+47486647 | MS.gene61637:CDS |
| ATATGGAAGAGGAGAATAGG+AGG | 0.568120 | 4.1:+47486658 | MS.gene61637:CDS |
| TCCACAGTGCAAGGGAGAGA+AGG | 0.570484 | 4.1:+47485806 | MS.gene61637:CDS |
| GGTGAGGATGCTCTTAAGGA+AGG | 0.584094 | 4.1:+47484033 | MS.gene61637:CDS |
| CAGCAAAGGTTCTAAATCTG+GGG | 0.584886 | 4.1:+47485641 | MS.gene61637:intron |
| AGATGTGGTTCATCCTCTCA+AGG | 0.587250 | 4.1:+47484252 | MS.gene61637:CDS |
| TATACATGCAGATTCATACA+AGG | 0.587937 | 4.1:+47486434 | MS.gene61637:intron |
| TATGCCTGGTGGGGCACAGA+GGG | 0.589588 | 4.1:+47486725 | MS.gene61637:CDS |
| GTGGTGGTAGTAGCCGAGGA+CGG | 0.590849 | 4.1:+47484212 | MS.gene61637:CDS |
| AGAAGATGTCAAATGGGTCA+TGG | 0.591968 | 4.1:-47484080 | None:intergenic |
| TCTCTCACCGAGGCTTTGTG+TGG | 0.591985 | 4.1:+47486112 | MS.gene61637:CDS |
| ATGAAATGTGCTGGTTGTCA+AGG | 0.596299 | 4.1:+47485669 | MS.gene61637:CDS |
| ACTGCTTCATCAGCTTCACC+AGG | 0.599026 | 4.1:-47485900 | None:intergenic |
| GACGAGGATGATGATATGCC+TGG | 0.603076 | 4.1:+47486711 | MS.gene61637:CDS |
| GGTGGTGGTGGTAGTAGCCG+AGG | 0.603379 | 4.1:+47484208 | MS.gene61637:CDS |
| GCAGAGACGTGGAGAAGATG+TGG | 0.607136 | 4.1:+47484237 | MS.gene61637:CDS |
| CATGGAGATCGATGAGTGCG+AGG | 0.609688 | 4.1:+47486614 | MS.gene61637:CDS |
| TACCAGAGGCCATTTATGAA+GGG | 0.613207 | 4.1:+47486483 | MS.gene61637:CDS |
| CTGATCAAGACTTAGAGTGT+CGG | 0.613726 | 4.1:-47486538 | None:intergenic |
| CGAGGACGGAGGCAGAGACG+TGG | 0.614603 | 4.1:+47484226 | MS.gene61637:CDS |
| GACCGCTGTCCACAGTGCAA+GGG | 0.616803 | 4.1:+47485798 | MS.gene61637:CDS |
| TTCATCACAATTGACAGACA+TGG | 0.617149 | 4.1:+47486596 | MS.gene61637:CDS |
| CTCCCTTGCACTGTGGACAG+CGG | 0.620041 | 4.1:-47485800 | None:intergenic |
| GCTCTTAAGGAAGGAATGGG+TGG | 0.621909 | 4.1:+47484042 | MS.gene61637:CDS |
| TTGGAAACCACACAAAGCCT+CGG | 0.623021 | 4.1:-47486119 | None:intergenic |
| AAAGCTTCTTAGATGTCCCA+AGG | 0.634241 | 4.1:-47484294 | None:intergenic |
| AGGATGATGATATGCCTGGT+GGG | 0.636687 | 4.1:+47486715 | MS.gene61637:CDS |
| TCTTGTGCTCAAAGTGCAGT+GGG | 0.652317 | 4.1:+47484332 | MS.gene61637:CDS |
| TCCTCCAAAGAGACCTTGAG+AGG | 0.655831 | 4.1:-47484265 | None:intergenic |
| TACAAGGCTATTAACGACGA+GGG | 0.661646 | 4.1:+47486450 | MS.gene61637:CDS |
| AGGGAATGCCGATGTACCAG+AGG | 0.663735 | 4.1:+47486469 | MS.gene61637:CDS |
| GTGGTAGTAGCCGAGGACGG+AGG | 0.663999 | 4.1:+47484215 | MS.gene61637:CDS |
| GTCTTGTGCTCAAAGTGCAG+TGG | 0.666176 | 4.1:+47484331 | MS.gene61637:CDS |
| CATCCTTGTAACGAATGTAA+GGG | 0.667371 | 4.1:+47485750 | MS.gene61637:CDS |
| GCAGCCAGACACAGTTACTG+GGG | 0.674307 | 4.1:+47486009 | MS.gene61637:intron |
| GGATGATGATATGCCTGGTG+GGG | 0.675094 | 4.1:+47486716 | MS.gene61637:CDS |
| CTTCTTATCAAATCGAACCC+CGG | 0.678657 | 4.1:+47486172 | MS.gene61637:CDS |
| ACCTTCTCTCCCTTGCACTG+TGG | 0.679545 | 4.1:-47485807 | None:intergenic |
| GCTTTACATTCACTTCACTG+TGG | 0.688048 | 4.1:+47486509 | MS.gene61637:CDS |
| GATCAAGACTTAGAGTGTCG+GGG | 0.692079 | 4.1:-47486536 | None:intergenic |
| GCTGAATCATTGATGGACCA+AGG | 0.692801 | 4.1:-47485719 | None:intergenic |
| CTGCTTCATCAGCTTCACCA+GGG | 0.698728 | 4.1:-47485899 | None:intergenic |
| ATATGCCTGGTGGGGCACAG+AGG | 0.713014 | 4.1:+47486724 | MS.gene61637:CDS |
| GAGGATGATGATATGCCTGG+TGG | 0.714325 | 4.1:+47486714 | MS.gene61637:CDS |
| CAGGCTTGACAACTTCTCCG+GGG | 0.727309 | 4.1:-47486189 | None:intergenic |
| ATACAAGGCTATTAACGACG+AGG | 0.731476 | 4.1:+47486449 | MS.gene61637:CDS |
| GATTTATGATACATATGGTG+AGG | 0.740557 | 4.1:+47484017 | MS.gene61637:CDS |
| GCAACAGGAAGCATATGACG+AGG | 0.743809 | 4.1:+47486695 | MS.gene61637:CDS |
| GCACACACTGTCTCTCACCG+AGG | 0.788370 | 4.1:+47486102 | MS.gene61637:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAGATTTGTAATTTTTTG+TGG | + | chr4.1:47486407-47486426 | MS.gene61637:intron | 15.0% |
| !!! | ATTATAAGCAAGATATTTTT+TGG | + | chr4.1:47485553-47485572 | MS.gene61637:intron | 15.0% |
| !!! | TATATATGATAATGTATCTA+TGG | - | chr4.1:47484628-47484647 | None:intergenic | 15.0% |
| !! | AAAAATAAGAAAATGTGAGA+TGG | - | chr4.1:47485274-47485293 | None:intergenic | 20.0% |
| !! | ATAACTATAACAAATCAGAT+GGG | - | chr4.1:47484937-47484956 | None:intergenic | 20.0% |
| !! | TCATATATCAAGTGTAAATT+TGG | - | chr4.1:47484906-47484925 | None:intergenic | 20.0% |
| !! | TTACAAACAAAAAGACATTT+GGG | - | chr4.1:47484511-47484530 | None:intergenic | 20.0% |
| !! | TTATAATTGAACTAGATTGT+TGG | - | chr4.1:47485540-47485559 | None:intergenic | 20.0% |
| !! | TTCATCCATAAAAAATTAAC+TGG | - | chr4.1:47484427-47484446 | None:intergenic | 20.0% |
| !! | TTTACAAACAAAAAGACATT+TGG | - | chr4.1:47484512-47484531 | None:intergenic | 20.0% |
| !! | TTTGTAATTATTTACAGCAA+AGG | + | chr4.1:47485627-47485646 | MS.gene61637:intron | 20.0% |
| !!! | CTCTTTTTTTTTTTTGAAGA+TGG | + | chr4.1:47485494-47485513 | MS.gene61637:intron | 20.0% |
| !!! | TGTTTACCCAATTTTTTATT+AGG | + | chr4.1:47485459-47485478 | MS.gene61637:intron | 20.0% |
| !!! | TTCCTATTGTGTTATTTATT+TGG | + | chr4.1:47484122-47484141 | MS.gene61637:intron | 20.0% |
| !!! | TTTTGCCAGTTAATTTTTTA+TGG | + | chr4.1:47484419-47484438 | MS.gene61637:intron | 20.0% |
| !!! | TTTTTGTTTGTAAACACATT+TGG | + | chr4.1:47484518-47484537 | MS.gene61637:intron | 20.0% |
| ! | AAAAAAAAATACTCCAACAC+TGG | - | chr4.1:47485010-47485029 | None:intergenic | 25.0% |
| ! | AACAGAGCCTAATAAAAAAT+TGG | - | chr4.1:47485469-47485488 | None:intergenic | 25.0% |
| ! | AATGTCAATGTTACTAAGTA+AGG | - | chr4.1:47485936-47485955 | None:intergenic | 25.0% |
| ! | ACAGAGCCTAATAAAAAATT+GGG | - | chr4.1:47485468-47485487 | None:intergenic | 25.0% |
| ! | ATAGCAACTAATGTAAGTAA+TGG | - | chr4.1:47485608-47485627 | None:intergenic | 25.0% |
| ! | ATGTCAATGTTACTAAGTAA+GGG | - | chr4.1:47485935-47485954 | None:intergenic | 25.0% |
| ! | ATTCTAATCAGAAAGCAAAA+CGG | - | chr4.1:47486249-47486268 | None:intergenic | 25.0% |
| ! | CATAACTATAACAAATCAGA+TGG | - | chr4.1:47484938-47484957 | None:intergenic | 25.0% |
| ! | GACCAAATAAATAACACAAT+AGG | - | chr4.1:47484127-47484146 | None:intergenic | 25.0% |
| ! | GATAATGTATCTATGGAATT+GGG | - | chr4.1:47484621-47484640 | None:intergenic | 25.0% |
| ! | TACTGACAAAATACACATTT+AGG | + | chr4.1:47485352-47485371 | MS.gene61637:intron | 25.0% |
| ! | TGCATAAATGTTTCTCAATT+CGG | + | chr4.1:47485577-47485596 | MS.gene61637:intron | 25.0% |
| ! | TGTATGGTTTGATTATCTAA+AGG | + | chr4.1:47484159-47484178 | MS.gene61637:intron | 25.0% |
| !! | TGATAATGTATCTATGGAAT+TGG | - | chr4.1:47484622-47484641 | None:intergenic | 25.0% |
| !! | TGTGTATTTTGTCAGTAATT+TGG | - | chr4.1:47485349-47485368 | None:intergenic | 25.0% |
| !! | TGTTCAGTTGGTTAAATTTT+GGG | - | chr4.1:47485314-47485333 | None:intergenic | 25.0% |
| !! | TTGTTTTCTTGTTGAAGATT+CGG | + | chr4.1:47485068-47485087 | MS.gene61637:intron | 25.0% |
| !! | TTTTCTTTTATCCCTTCAAA+TGG | + | chr4.1:47484845-47484864 | MS.gene61637:intron | 25.0% |
| !!! | GGTCTTAATCTATTTTTGTA+TGG | + | chr4.1:47484143-47484162 | MS.gene61637:intron | 25.0% |
| !!! | TTTGTATTTTGATACATCCT+AGG | - | chr4.1:47484483-47484502 | None:intergenic | 25.0% |
| !!! | TTTTTGCACTGATTTTGTTT+TGG | + | chr4.1:47485026-47485045 | MS.gene61637:intron | 25.0% |
| !!! | TTTTTTTTGAAGATGGTGTT+TGG | + | chr4.1:47485501-47485520 | MS.gene61637:intron | 25.0% |
| ATGTGATTCATTTACATACC+AGG | - | chr4.1:47486211-47486230 | None:intergenic | 30.0% | |
| CGTGAGATTTATGATACATA+TGG | + | chr4.1:47484012-47484031 | MS.gene61637:CDS | 30.0% | |
| CTATTCGACAATACTATATC+TGG | - | chr4.1:47486296-47486315 | None:intergenic | 30.0% | |
| GATTTATGATACATATGGTG+AGG | + | chr4.1:47484017-47484036 | MS.gene61637:CDS | 30.0% | |
| TACACTTCATGATGTCAATA+TGG | + | chr4.1:47486641-47486660 | MS.gene61637:CDS | 30.0% | |
| TATACATGCAGATTCATACA+AGG | + | chr4.1:47486434-47486453 | MS.gene61637:intron | 30.0% | |
| TATGGTAGATTTGTGTGATT+AGG | + | chr4.1:47485178-47485197 | MS.gene61637:intron | 30.0% | |
| TTATCCCTTCAAATGGAATT+GGG | + | chr4.1:47484852-47484871 | MS.gene61637:intron | 30.0% | |
| TTCGATACATTCAGATTTGA+AGG | + | chr4.1:47485387-47485406 | MS.gene61637:intron | 30.0% | |
| TTTATCCCTTCAAATGGAAT+TGG | + | chr4.1:47484851-47484870 | MS.gene61637:intron | 30.0% | |
| ! | GATCTCTGTTTTCAGAAATA+TGG | + | chr4.1:47485160-47485179 | MS.gene61637:intron | 30.0% |
| ! | GTGTTCAGTTGGTTAAATTT+TGG | - | chr4.1:47485315-47485334 | None:intergenic | 30.0% |
| ! | TATGTTTTCCTTCACAAAGA+AGG | + | chr4.1:47485138-47485157 | MS.gene61637:intron | 30.0% |
| !! | ATGCACACTTCTATTTTTCA+TGG | + | chr4.1:47484955-47484974 | MS.gene61637:intron | 30.0% |
| !! | TTCTTGTTGTTGTTGTTGTT+GGG | - | chr4.1:47484732-47484751 | None:intergenic | 30.0% |
| !!! | GATTTTTGACTTGTATGAAC+AGG | + | chr4.1:47484181-47484200 | MS.gene61637:intron | 30.0% |
| AAAACCCCAATTCCATTTGA+AGG | - | chr4.1:47484860-47484879 | None:intergenic | 35.0% | |
| AAACCCCAATTCCATTTGAA+GGG | - | chr4.1:47484859-47484878 | None:intergenic | 35.0% | |
| AAAGACGAGAAGATGTCAAA+TGG | - | chr4.1:47484090-47484109 | None:intergenic | 35.0% | |
| AAGACGAGAAGATGTCAAAT+GGG | - | chr4.1:47484089-47484108 | None:intergenic | 35.0% | |
| AAGGTTTCTATTAGACACCT+TGG | + | chr4.1:47485702-47485721 | MS.gene61637:CDS | 35.0% | |
| AATTGTGATGAAGGTTTAGC+TGG | - | chr4.1:47486588-47486607 | None:intergenic | 35.0% | |
| ACAAAAAAACTCAGCATCTG+TGG | - | chr4.1:47485233-47485252 | None:intergenic | 35.0% | |
| ACTATAGCAATGTAGCATAG+TGG | + | chr4.1:47486329-47486348 | MS.gene61637:intron | 35.0% | |
| ATCATAAATCTCACGCTTCT+CGG | - | chr4.1:47484007-47484026 | None:intergenic | 35.0% | |
| ATGTCTGTCAATTGTGATGA+AGG | - | chr4.1:47486597-47486616 | None:intergenic | 35.0% | |
| CAACAACAACAACAACAAGA+AGG | + | chr4.1:47484731-47484750 | MS.gene61637:intron | 35.0% | |
| CATCCTTGTAACGAATGTAA+GGG | + | chr4.1:47485750-47485769 | MS.gene61637:CDS | 35.0% | |
| GTGAGATGGAATTAGTAGAA+TGG | - | chr4.1:47485260-47485279 | None:intergenic | 35.0% | |
| TAAAGCTTGCCCTTCATAAA+TGG | - | chr4.1:47486495-47486514 | None:intergenic | 35.0% | |
| TAACAAATCAGATGGGTGTA+AGG | - | chr4.1:47484930-47484949 | None:intergenic | 35.0% | |
| TAATCAGAAAGCAAAACGGA+GGG | - | chr4.1:47486245-47486264 | None:intergenic | 35.0% | |
| TATCCCTTCAAATGGAATTG+GGG | + | chr4.1:47484853-47484872 | MS.gene61637:intron | 35.0% | |
| TCAATATGGAAGAGGAGAAT+AGG | + | chr4.1:47486655-47486674 | MS.gene61637:CDS | 35.0% | |
| TCATCAAATGTGTGTTCAGT+TGG | - | chr4.1:47485326-47485345 | None:intergenic | 35.0% | |
| TCATGATGTCAATATGGAAG+AGG | + | chr4.1:47486647-47486666 | MS.gene61637:CDS | 35.0% | |
| TTCATCACAATTGACAGACA+TGG | + | chr4.1:47486596-47486615 | MS.gene61637:CDS | 35.0% | |
| ! | ATGAAATGATAGTGAGTGTG+AGG | + | chr4.1:47484442-47484461 | MS.gene61637:intron | 35.0% |
| ! | CTTCTTTTTCTTTCCAGTGT+TGG | + | chr4.1:47484994-47485013 | MS.gene61637:intron | 35.0% |
| ! | GGTTCGATTTGATAAGAAGT+TGG | - | chr4.1:47486171-47486190 | None:intergenic | 35.0% |
| ! | TCGCTCTTTCTTTTGAACTT+GGG | - | chr4.1:47486067-47486086 | None:intergenic | 35.0% |
| ! | TGCATTTGCTGAATCATTGA+TGG | - | chr4.1:47485729-47485748 | None:intergenic | 35.0% |
| ! | TGTAAACACATTTGGTGACT+GGG | + | chr4.1:47484526-47484545 | MS.gene61637:intron | 35.0% |
| ! | TTCGCTCTTTCTTTTGAACT+TGG | - | chr4.1:47486068-47486087 | None:intergenic | 35.0% |
| ! | TTGTAAACACATTTGGTGAC+TGG | + | chr4.1:47484525-47484544 | MS.gene61637:intron | 35.0% |
| !! | ACAGCAAAGGTTCTAAATCT+GGG | + | chr4.1:47485640-47485659 | MS.gene61637:intron | 35.0% |
| !! | CTTCTTGTTGTTGTTGTTGT+TGG | - | chr4.1:47484733-47484752 | None:intergenic | 35.0% |
| !! | TACAGCAAAGGTTCTAAATC+TGG | + | chr4.1:47485639-47485658 | MS.gene61637:intron | 35.0% |
| !!! | GTATCGTAAGAGTTTTGGTT+TGG | + | chr4.1:47484358-47484377 | MS.gene61637:intron | 35.0% |
| !!! | TGCACTGATTTTGTTTTGGA+CGG | + | chr4.1:47485030-47485049 | MS.gene61637:intron | 35.0% |
| !!! | TTTTGACTTGTATGAACAGG+TGG | + | chr4.1:47484184-47484203 | MS.gene61637:intron | 35.0% |
| AAAGCTTCTTAGATGTCCCA+AGG | - | chr4.1:47484297-47484316 | None:intergenic | 40.0% | |
| ACAAGAAGGTCAGAACTTGA+AGG | + | chr4.1:47484745-47484764 | MS.gene61637:intron | 40.0% | |
| ACAGAGATCCTTCTTTGTGA+AGG | - | chr4.1:47485149-47485168 | None:intergenic | 40.0% | |
| ACAGTGTGTGCTCTACAAAA+AGG | - | chr4.1:47486093-47486112 | None:intergenic | 40.0% | |
| AGAAGATGTCAAATGGGTCA+TGG | - | chr4.1:47484083-47484102 | None:intergenic | 40.0% | |
| AGATTTGTGTGATTAGGCAG+CGG | + | chr4.1:47485184-47485203 | MS.gene61637:intron | 40.0% | |
| AGCAAAACCCTTTGGTGAAA+AGG | - | chr4.1:47484782-47484801 | None:intergenic | 40.0% | |
| AGTCAGAAGATTACATTCCC+TGG | + | chr4.1:47485882-47485901 | MS.gene61637:CDS | 40.0% | |
| ATAAATGGCCTCTGGTACAT+CGG | - | chr4.1:47486480-47486499 | None:intergenic | 40.0% | |
| ATACAAGGCTATTAACGACG+AGG | + | chr4.1:47486449-47486468 | MS.gene61637:CDS | 40.0% | |
| ATATGGAAGAGGAGAATAGG+AGG | + | chr4.1:47486658-47486677 | MS.gene61637:CDS | 40.0% | |
| ATATGGTGAGGATGCTCTTA+AGG | + | chr4.1:47484029-47484048 | MS.gene61637:CDS | 40.0% | |
| ATCTGTGGATTCCATCTCTA+CGG | - | chr4.1:47485218-47485237 | None:intergenic | 40.0% | |
| ATGTGTTGTCAGTTGAGCAT+TGG | - | chr4.1:47486379-47486398 | None:intergenic | 40.0% | |
| CCAAGTGAGTAAGCACAAAT+TGG | - | chr4.1:47486141-47486160 | None:intergenic | 40.0% | |
| CCAATTTGTGCTTACTCACT+TGG | + | chr4.1:47486138-47486157 | MS.gene61637:CDS | 40.0% | |
| CTAAGTCTTGATCAGGTGAA+AGG | + | chr4.1:47486546-47486565 | MS.gene61637:CDS | 40.0% | |
| CTAATCAGAAAGCAAAACGG+AGG | - | chr4.1:47486246-47486265 | None:intergenic | 40.0% | |
| CTGATCAAGACTTAGAGTGT+CGG | - | chr4.1:47486541-47486560 | None:intergenic | 40.0% | |
| CTTCTTATCAAATCGAACCC+CGG | + | chr4.1:47486172-47486191 | MS.gene61637:CDS | 40.0% | |
| CTTGAAGTTCATGTCGAGAA+AGG | + | chr4.1:47485849-47485868 | MS.gene61637:CDS | 40.0% | |
| GACATCTTCTCGTCTTTCTT+TGG | + | chr4.1:47484093-47484112 | MS.gene61637:CDS | 40.0% | |
| GATACCAAAGCAAAACCCTT+TGG | - | chr4.1:47484790-47484809 | None:intergenic | 40.0% | |
| GATGCTCTTAAGGAAGGAAT+GGG | + | chr4.1:47484039-47484058 | MS.gene61637:CDS | 40.0% | |
| GCAAAACCCTTTGGTGAAAA+GGG | - | chr4.1:47484781-47484800 | None:intergenic | 40.0% | |
| GCATCCTTGTAACGAATGTA+AGG | + | chr4.1:47485749-47485768 | MS.gene61637:CDS | 40.0% | |
| GCTTTACATTCACTTCACTG+TGG | + | chr4.1:47486509-47486528 | MS.gene61637:CDS | 40.0% | |
| GTACCCTTACATTCGTTACA+AGG | - | chr4.1:47485756-47485775 | None:intergenic | 40.0% | |
| TACAAGGCTATTAACGACGA+GGG | + | chr4.1:47486450-47486469 | MS.gene61637:CDS | 40.0% | |
| TACCAGAGGCCATTTATGAA+GGG | + | chr4.1:47486483-47486502 | MS.gene61637:CDS | 40.0% | |
| TCATAAATCTCACGCTTCTC+GGG | - | chr4.1:47484006-47484025 | None:intergenic | 40.0% | |
| TCTTAGATGTCCCAAGGTAA+AGG | - | chr4.1:47484291-47484310 | None:intergenic | 40.0% | |
| TTGACAACCAGCACATTTCA+TGG | - | chr4.1:47485670-47485689 | None:intergenic | 40.0% | |
| TTGTCAAGGAACTGGTATGA+AGG | + | chr4.1:47485683-47485702 | MS.gene61637:CDS | 40.0% | |
| TTTGTGCTTACTCACTTGGA+TGG | + | chr4.1:47486142-47486161 | MS.gene61637:CDS | 40.0% | |
| TTTGTTGAGCCGAAACTGTA+GGG | + | chr4.1:47484559-47484578 | MS.gene61637:intron | 40.0% | |
| ! | TGATCAAGACTTAGAGTGTC+GGG | - | chr4.1:47486540-47486559 | None:intergenic | 40.0% |
| ! | TGTAACGAATGTAAGGGTAC+TGG | + | chr4.1:47485756-47485775 | MS.gene61637:CDS | 40.0% |
| ! | TTCACCAAAGGGTTTTGCTT+TGG | + | chr4.1:47484783-47484802 | MS.gene61637:intron | 40.0% |
| ! | TTTTGTTGAGCCGAAACTGT+AGG | + | chr4.1:47484558-47484577 | MS.gene61637:intron | 40.0% |
| !! | ATGAAATGTGCTGGTTGTCA+AGG | + | chr4.1:47485669-47485688 | MS.gene61637:CDS | 40.0% |
| !! | CAGCAAAGGTTCTAAATCTG+GGG | + | chr4.1:47485641-47485660 | MS.gene61637:intron | 40.0% |
| !! | GGTAGGTATCGTAAGAGTTT+TGG | + | chr4.1:47484353-47484372 | MS.gene61637:intron | 40.0% |
| !!! | CACTGATTTTGTTTTGGACG+GGG | + | chr4.1:47485032-47485051 | MS.gene61637:intron | 40.0% |
| !!! | GCACTGATTTTGTTTTGGAC+GGG | + | chr4.1:47485031-47485050 | MS.gene61637:intron | 40.0% |
| AAATGAGAGAGGCCTTGAGT+GGG | + | chr4.1:47484591-47484610 | MS.gene61637:intron | 45.0% | |
| AGAGCTAGCACAAGCTTATG+AGG | + | chr4.1:47483969-47483988 | MS.gene61637:CDS | 45.0% | |
| AGATGTGGTTCATCCTCTCA+AGG | + | chr4.1:47484252-47484271 | MS.gene61637:CDS | 45.0% | |
| AGGATGATGATATGCCTGGT+GGG | + | chr4.1:47486715-47486734 | MS.gene61637:CDS | 45.0% | |
| ATATCCCCAGTAACTGTGTC+TGG | - | chr4.1:47486016-47486035 | None:intergenic | 45.0% | |
| ATTCCATCTCTACGGTTGTC+TGG | - | chr4.1:47485210-47485229 | None:intergenic | 45.0% | |
| CAATCACTGCCCTACAGTTT+CGG | - | chr4.1:47484571-47484590 | None:intergenic | 45.0% | |
| CGACACTCTAAGTCTTGATC+AGG | + | chr4.1:47486539-47486558 | MS.gene61637:CDS | 45.0% | |
| GAATTGGGTATTCCCACTCA+AGG | - | chr4.1:47484606-47484625 | None:intergenic | 45.0% | |
| GGATGCTCTTAAGGAAGGAA+TGG | + | chr4.1:47484038-47484057 | MS.gene61637:CDS | 45.0% | |
| GGCAGTGATTGAAATGAGAG+AGG | + | chr4.1:47484580-47484599 | MS.gene61637:intron | 45.0% | |
| GGCATTCTCACAATAGTCCT+AGG | + | chr4.1:47484463-47484482 | MS.gene61637:intron | 45.0% | |
| GTACCAGAGGCCATTTATGA+AGG | + | chr4.1:47486482-47486501 | MS.gene61637:CDS | 45.0% | |
| TACAGCGCATCACACATTCA+AGG | + | chr4.1:47485418-47485437 | MS.gene61637:intron | 45.0% | |
| TCATCCTCTCAAGGTCTCTT+TGG | + | chr4.1:47484261-47484280 | MS.gene61637:CDS | 45.0% | |
| TCTTGTGCTCAAAGTGCAGT+GGG | + | chr4.1:47484332-47484351 | MS.gene61637:CDS | 45.0% | |
| TGATCAGGTGAAAGGTTTGC+AGG | + | chr4.1:47486554-47486573 | MS.gene61637:CDS | 45.0% | |
| TTGGAAACCACACAAAGCCT+CGG | - | chr4.1:47486122-47486141 | None:intergenic | 45.0% | |
| TTGGAAAGATCCGTCACTGT+GGG | - | chr4.1:47484887-47484906 | None:intergenic | 45.0% | |
| TTTGGAAAGATCCGTCACTG+TGG | - | chr4.1:47484888-47484907 | None:intergenic | 45.0% | |
| ! | CTTTGGAGGACCTTTACCTT+GGG | + | chr4.1:47484278-47484297 | MS.gene61637:CDS | 45.0% |
| ! | GCTGAATCATTGATGGACCA+AGG | - | chr4.1:47485722-47485741 | None:intergenic | 45.0% |
| ! | GGGTTTTGCTTTGGTATCTC+AGG | + | chr4.1:47484792-47484811 | MS.gene61637:intron | 45.0% |
| ! | TCTTTGGAGGACCTTTACCT+TGG | + | chr4.1:47484277-47484296 | MS.gene61637:CDS | 45.0% |
| ! | TGACTTGTATGAACAGGTGG+TGG | + | chr4.1:47484187-47484206 | MS.gene61637:intron | 45.0% |
| !! | GATCAAGACTTAGAGTGTCG+GGG | - | chr4.1:47486539-47486558 | None:intergenic | 45.0% |
| !!! | GGTTTTTTTCCCCACAGTGA+CGG | + | chr4.1:47484874-47484893 | MS.gene61637:intron | 45.0% |
| ACCAGGCTTGACAACTTCTC+CGG | - | chr4.1:47486194-47486213 | None:intergenic | 50.0% | |
| ACCCTTTGGTGAAAAGGGTG+TGG | - | chr4.1:47484776-47484795 | None:intergenic | 50.0% | |
| ACTGCTTCATCAGCTTCACC+AGG | - | chr4.1:47485903-47485922 | None:intergenic | 50.0% | |
| CTGCTTCATCAGCTTCACCA+GGG | - | chr4.1:47485902-47485921 | None:intergenic | 50.0% | |
| CTTAAGGAAGGAATGGGTGG+TGG | + | chr4.1:47484045-47484064 | MS.gene61637:CDS | 50.0% | |
| GAAACAGCAGCAACAGCAAC+AGG | + | chr4.1:47486680-47486699 | MS.gene61637:CDS | 50.0% | |
| GAAATGAGAGAGGCCTTGAG+TGG | + | chr4.1:47484590-47484609 | MS.gene61637:intron | 50.0% | |
| GACGAGGATGATGATATGCC+TGG | + | chr4.1:47486711-47486730 | MS.gene61637:CDS | 50.0% | |
| GAGGATGATGATATGCCTGG+TGG | + | chr4.1:47486714-47486733 | MS.gene61637:CDS | 50.0% | |
| GCTCTTAAGGAAGGAATGGG+TGG | + | chr4.1:47484042-47484061 | MS.gene61637:CDS | 50.0% | |
| GGATGATGATATGCCTGGTG+GGG | + | chr4.1:47486716-47486735 | MS.gene61637:CDS | 50.0% | |
| GGTGAGGATGCTCTTAAGGA+AGG | + | chr4.1:47484033-47484052 | MS.gene61637:CDS | 50.0% | |
| GTCTTGTGCTCAAAGTGCAG+TGG | + | chr4.1:47484331-47484350 | MS.gene61637:CDS | 50.0% | |
| TCCTCCAAAGAGACCTTGAG+AGG | - | chr4.1:47484268-47484287 | None:intergenic | 50.0% | |
| TCCTCTCAAGGTCTCTTTGG+AGG | + | chr4.1:47484264-47484283 | MS.gene61637:CDS | 50.0% | |
| TGCAGCCAGACACAGTTACT+GGG | + | chr4.1:47486008-47486027 | MS.gene61637:intron | 50.0% | |
| TGCCCTTCATAAATGGCCTC+TGG | - | chr4.1:47486488-47486507 | None:intergenic | 50.0% | |
| TGGAAAGATCCGTCACTGTG+GGG | - | chr4.1:47484886-47484905 | None:intergenic | 50.0% | |
| TTGCAGCCAGACACAGTTAC+TGG | + | chr4.1:47486007-47486026 | MS.gene61637:intron | 50.0% | |
| ! | CTTGTATGAACAGGTGGTGG+TGG | + | chr4.1:47484190-47484209 | MS.gene61637:intron | 50.0% |
| ! | CTTTGGTGAAAAGGGTGTGG+CGG | - | chr4.1:47484773-47484792 | None:intergenic | 50.0% |
| ! | GCAACAGGAAGCATATGACG+AGG | + | chr4.1:47486695-47486714 | MS.gene61637:CDS | 50.0% |
| ! | GCCACACCCTTTTCACCAAA+GGG | + | chr4.1:47484772-47484791 | MS.gene61637:intron | 50.0% |
| !! | TGTGCTGGTTGTCAAGGAAC+TGG | + | chr4.1:47485675-47485694 | MS.gene61637:CDS | 50.0% |
| ACCTTCTCTCCCTTGCACTG+TGG | - | chr4.1:47485810-47485829 | None:intergenic | 55.0% | |
| AGGGAATGCCGATGTACCAG+AGG | + | chr4.1:47486469-47486488 | MS.gene61637:CDS | 55.0% | |
| CAGGCTTGACAACTTCTCCG+GGG | - | chr4.1:47486192-47486211 | None:intergenic | 55.0% | |
| CATGGAGATCGATGAGTGCG+AGG | + | chr4.1:47486614-47486633 | MS.gene61637:CDS | 55.0% | |
| CCAGGCTTGACAACTTCTCC+GGG | - | chr4.1:47486193-47486212 | None:intergenic | 55.0% | |
| GCAGAGACGTGGAGAAGATG+TGG | + | chr4.1:47484237-47484256 | MS.gene61637:CDS | 55.0% | |
| GCAGCCAGACACAGTTACTG+GGG | + | chr4.1:47486009-47486028 | MS.gene61637:intron | 55.0% | |
| GGGGCTTCCATGAAATGTGC+TGG | + | chr4.1:47485660-47485679 | MS.gene61637:CDS | 55.0% | |
| GTGCTCAAAGTGCAGTGGGT+AGG | + | chr4.1:47484336-47484355 | MS.gene61637:intron | 55.0% | |
| TCCACAGTGCAAGGGAGAGA+AGG | + | chr4.1:47485806-47485825 | MS.gene61637:CDS | 55.0% | |
| ! | AAGGAAGGAATGGGTGGTGG+AGG | + | chr4.1:47484048-47484067 | MS.gene61637:CDS | 55.0% |
| ! | CGCCACACCCTTTTCACCAA+AGG | + | chr4.1:47484771-47484790 | MS.gene61637:intron | 55.0% |
| ! | TCTCTCACCGAGGCTTTGTG+TGG | + | chr4.1:47486112-47486131 | MS.gene61637:CDS | 55.0% |
| !! | GTATGAACAGGTGGTGGTGG+TGG | + | chr4.1:47484193-47484212 | MS.gene61637:intron | 55.0% |
| AGACCGCTGTCCACAGTGCA+AGG | + | chr4.1:47485797-47485816 | MS.gene61637:CDS | 60.0% | |
| ATATGCCTGGTGGGGCACAG+AGG | + | chr4.1:47486724-47486743 | MS.gene61637:CDS | 60.0% | |
| CCCGGAGAAGTTGTCAAGCC+TGG | + | chr4.1:47486190-47486209 | MS.gene61637:CDS | 60.0% | |
| CGGCCAGACAACCGTAGAGA+TGG | + | chr4.1:47485204-47485223 | MS.gene61637:intron | 60.0% | |
| CTCCCTTGCACTGTGGACAG+CGG | - | chr4.1:47485803-47485822 | None:intergenic | 60.0% | |
| GACCGCTGTCCACAGTGCAA+GGG | + | chr4.1:47485798-47485817 | MS.gene61637:CDS | 60.0% | |
| GCACACACTGTCTCTCACCG+AGG | + | chr4.1:47486102-47486121 | MS.gene61637:CDS | 60.0% | |
| GTGGTGGTAGTAGCCGAGGA+CGG | + | chr4.1:47484212-47484231 | MS.gene61637:CDS | 60.0% | |
| TATGCCTGGTGGGGCACAGA+GGG | + | chr4.1:47486725-47486744 | MS.gene61637:CDS | 60.0% | |
| !! | GAAGGAATGGGTGGTGGAGG+TGG | + | chr4.1:47484051-47484070 | MS.gene61637:CDS | 60.0% |
| !! | TGAACAGGTGGTGGTGGTGG+TGG | + | chr4.1:47484196-47484215 | MS.gene61637:intron | 60.0% |
| CACGTCTCTGCCTCCGTCCT+CGG | - | chr4.1:47484228-47484247 | None:intergenic | 65.0% | |
| GTGGTAGTAGCCGAGGACGG+AGG | + | chr4.1:47484215-47484234 | MS.gene61637:CDS | 65.0% | |
| TGTACCCTCTGTGCCCCACC+AGG | - | chr4.1:47486732-47486751 | None:intergenic | 65.0% | |
| !! | ATGGGTGGTGGAGGTGGTGG+TGG | + | chr4.1:47484057-47484076 | MS.gene61637:CDS | 65.0% |
| !! | GGAATGGGTGGTGGAGGTGG+TGG | + | chr4.1:47484054-47484073 | MS.gene61637:CDS | 65.0% |
| !! | GGTGGTGGTGGTAGTAGCCG+AGG | + | chr4.1:47484208-47484227 | MS.gene61637:CDS | 65.0% |
| CGAGGACGGAGGCAGAGACG+TGG | + | chr4.1:47484226-47484245 | MS.gene61637:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 47483964 | 47486767 | 47483964 | ID=MS.gene61637 |
| chr4.1 | mRNA | 47483964 | 47486767 | 47483964 | ID=MS.gene61637.t1;Parent=MS.gene61637 |
| chr4.1 | exon | 47483964 | 47484114 | 47483964 | ID=MS.gene61637.t1.exon1;Parent=MS.gene61637.t1 |
| chr4.1 | CDS | 47483964 | 47484114 | 47483964 | ID=cds.MS.gene61637.t1;Parent=MS.gene61637.t1 |
| chr4.1 | exon | 47484203 | 47484353 | 47484203 | ID=MS.gene61637.t1.exon2;Parent=MS.gene61637.t1 |
| chr4.1 | CDS | 47484203 | 47484353 | 47484203 | ID=cds.MS.gene61637.t1;Parent=MS.gene61637.t1 |
| chr4.1 | exon | 47485644 | 47485920 | 47485644 | ID=MS.gene61637.t1.exon3;Parent=MS.gene61637.t1 |
| chr4.1 | CDS | 47485644 | 47485920 | 47485644 | ID=cds.MS.gene61637.t1;Parent=MS.gene61637.t1 |
| chr4.1 | exon | 47486013 | 47486211 | 47486013 | ID=MS.gene61637.t1.exon4;Parent=MS.gene61637.t1 |
| chr4.1 | CDS | 47486013 | 47486211 | 47486013 | ID=cds.MS.gene61637.t1;Parent=MS.gene61637.t1 |
| chr4.1 | exon | 47486445 | 47486767 | 47486445 | ID=MS.gene61637.t1.exon5;Parent=MS.gene61637.t1 |
| chr4.1 | CDS | 47486445 | 47486767 | 47486445 | ID=cds.MS.gene61637.t1;Parent=MS.gene61637.t1 |
| Gene Sequence |
| Protein sequence |
