AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene61782

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61782.t1 MTR_3g029590 97.411 734 14 4 1 732 1 731 0.0 1455
MS.gene61782.t1 MTR_7g092070 64.067 718 219 16 33 731 33 730 0.0 830
MS.gene61782.t1 MTR_0728s0020 58.039 622 227 12 29 642 13 608 0.0 639
MS.gene61782.t1 MTR_1g050438 58.049 615 224 12 33 639 1 589 0.0 632
MS.gene61782.t1 MTR_3g435590 63.800 500 102 4 1 500 1 421 0.0 605
MS.gene61782.t1 MTR_3g435590 52.174 92 42 2 591 682 379 468 2.10e-18 89.4
MS.gene61782.t1 MTR_3g435680 62.439 410 90 9 95 500 5 354 3.63e-153 451
MS.gene61782.t1 MTR_5g082830 40.361 721 324 23 45 729 28 678 1.87e-144 439
MS.gene61782.t1 MTR_5g071070 39.208 732 333 19 45 729 33 699 6.64e-141 430
MS.gene61782.t1 MTR_5g071070 39.003 682 304 19 95 729 1 617 4.15e-126 389
MS.gene61782.t1 MTR_1g075890 38.268 635 277 17 44 668 30 559 1.23e-120 376
MS.gene61782.t1 MTR_3g070880 34.342 661 244 17 45 691 8 492 3.06e-104 329
MS.gene61782.t1 MTR_3g464260 42.651 347 126 8 52 392 30 309 1.43e-76 256
MS.gene61782.t1 MTR_3g464280 34.332 434 173 11 49 468 19 354 6.50e-59 207
MS.gene61782.t1 MTR_6g090380 72.897 107 29 0 262 368 99 205 1.89e-55 194
MS.gene61782.t1 MTR_8g102100 52.410 166 68 2 262 420 77 238 6.58e-52 185
MS.gene61782.t1 MTR_2g090605 67.568 111 36 0 266 376 77 187 9.12e-52 186
MS.gene61782.t1 MTR_3g103960 62.281 114 42 1 256 368 43 156 1.22e-48 173
MS.gene61782.t1 MTR_4g078660 61.682 107 41 0 262 368 56 162 2.32e-47 171
MS.gene61782.t1 MTR_3g464270 32.483 431 196 15 265 682 8 356 4.09e-46 168
MS.gene61782.t1 MTR_3g464290 31.602 462 211 16 245 687 79 454 8.20e-40 153
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61782.t1 AT2G41900 59.025 759 236 24 1 731 1 712 0.0 768
MS.gene61782.t1 AT5G12850 52.587 715 269 23 41 729 36 706 0.0 666
MS.gene61782.t1 AT5G58620 41.275 659 286 17 44 685 11 585 1.45e-138 421
MS.gene61782.t1 AT2G40140 37.917 720 293 22 26 729 10 591 1.08e-124 385
MS.gene61782.t1 AT2G40140 37.917 720 293 22 26 729 10 591 1.08e-124 385
MS.gene61782.t1 AT3G55980 45.540 426 186 6 47 471 30 410 4.66e-114 357
MS.gene61782.t1 AT3G55980 45.540 426 186 6 47 471 97 477 5.15e-113 356
MS.gene61782.t1 AT2G19810 68.033 122 37 1 251 370 61 182 2.79e-55 194
MS.gene61782.t1 AT4G29190 53.939 165 70 1 255 413 68 232 1.05e-54 192
MS.gene61782.t1 AT2G25900 69.725 109 33 0 262 370 86 194 1.22e-54 191
MS.gene61782.t1 AT2G25900 69.725 109 33 0 262 370 86 194 1.22e-54 191
MS.gene61782.t1 AT5G07500 61.983 121 46 0 248 368 34 154 6.54e-53 183
MS.gene61782.t1 AT1G03790 54.601 163 66 3 223 381 43 201 3.42e-52 186
MS.gene61782.t1 AT5G44260 61.719 128 44 2 244 370 42 165 8.40e-49 176

Find 186 sgRNAs with CRISPR-Local

Find 219 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTATCATCTGCTGAAAA+TGG 0.161392 3.1:-20826184 MS.gene61782:CDS
ACAGCTGAGTCGGTAAATTT+TGG 0.186788 3.1:+20826139 None:intergenic
CGGCATTGATCACTCTGTTT+TGG 0.190245 3.1:-20824700 MS.gene61782:CDS
CAGCTGTAGTGAAACTTTCT+AGG 0.248659 3.1:+20825929 None:intergenic
TAGGAAGCAGCCACCATTAA+AGG 0.251482 3.1:+20826556 None:intergenic
TGAGCACCGAACTCCTTTAA+TGG 0.259664 3.1:-20826569 MS.gene61782:CDS
CTTCTTGGCGACATCCTTCC+AGG 0.288417 3.1:+20825101 None:intergenic
CTAGTTTGATTAATGCTTCC+TGG 0.298175 3.1:+20825515 None:intergenic
AAAGAGAAGCTTGCAGGTTC+TGG 0.300989 3.1:-20824765 MS.gene61782:CDS
CACTTAGACCAGGAGTTAAC+AGG 0.326627 3.1:+20824942 None:intergenic
CATACTGAGCCTGGTGGAAT+AGG 0.327090 3.1:+20825135 None:intergenic
TTCGGTGCTCAAGAACAATT+TGG 0.328148 3.1:+20826581 None:intergenic
CCCTCTCTCCAATGAGTTCT+CGG 0.331992 3.1:-20825070 MS.gene61782:CDS
TTATTAATGAAGTTGGCTTC+TGG 0.334337 3.1:-20826627 MS.gene61782:CDS
GCAAGCTTCTCTTTCTTCTC+AGG 0.349206 3.1:+20824774 None:intergenic
ATCAATTCGGTGGATGCTAA+TGG 0.355260 3.1:-20826373 MS.gene61782:CDS
TACAGCGGACGCAGCTCTTC+AGG 0.358359 3.1:+20825743 None:intergenic
GAGAGGGCTTCCATACTTCT+TGG 0.363064 3.1:+20825086 None:intergenic
AAGGATGTCGCCAAGAAGTA+TGG 0.366617 3.1:-20825096 MS.gene61782:CDS
GAGAAGAAAGAGAAGCTTGC+AGG 0.368507 3.1:-20824771 MS.gene61782:CDS
ATACTGAGCCTGGTGGAATA+GGG 0.368901 3.1:+20825136 None:intergenic
TTCTCTTTCTTCTCAGGTGT+GGG 0.372072 3.1:+20824780 None:intergenic
GATATGAGAGTATAAGCTTT+AGG 0.383249 3.1:+20826518 None:intergenic
ATGCCGTCCACTTGAGGGTT+GGG 0.394038 3.1:+20824717 None:intergenic
AACAATCCTGTCTCAGCTGT+TGG 0.394825 3.1:-20824969 MS.gene61782:CDS
TTAATGGTGGCTGCTTCCTA+TGG 0.398871 3.1:-20826553 MS.gene61782:CDS
GAAATCTTCAAAATCATTGT+TGG 0.399103 3.1:+20826678 None:intergenic
TGTGTTTGACCAAAGTCGTT+TGG 0.402204 3.1:+20824879 None:intergenic
AGCAGTAGAAGCAGCTGATC+GGG 0.402586 3.1:+20825691 None:intergenic
CCATTTGCAGATGGGGATAG+AGG 0.407663 3.1:+20825581 None:intergenic
AGGGGATGCTCTACGTTTGT+AGG 0.408542 3.1:+20825155 None:intergenic
TTTCACGCCTTCGAGCTTAT+GGG 0.408761 3.1:+20826309 None:intergenic
GAGATTGATGATGGTGAACC+AGG 0.414210 3.1:+20825632 None:intergenic
AGCTTTGGAGCTGTTGAAAC+TGG 0.414417 3.1:+20825210 None:intergenic
CTTCTCTTTCTTCTCAGGTG+TGG 0.414946 3.1:+20824779 None:intergenic
AATAGATCATCAAGATTTGA+TGG 0.416006 3.1:+20825320 None:intergenic
GCTTCACTTATTAATGAAGT+TGG 0.420259 3.1:-20826634 MS.gene61782:CDS
ATTCCGCATGTATTCATTCA+AGG 0.421704 3.1:-20826035 MS.gene61782:CDS
TCAGGAAGAGATGGGTCAAC+TGG 0.426785 3.1:+20826088 None:intergenic
CAGTATGGTCTCTCTTCTCC+TGG 0.430222 3.1:-20825119 MS.gene61782:CDS
AGCCTTGTCCGATACTGAGC+TGG 0.430472 3.1:+20825818 None:intergenic
ACAATCCTGTCTCAGCTGTT+GGG 0.435810 3.1:-20824968 MS.gene61782:CDS
AATATGTTGCAAGACTTTGA+TGG 0.442806 3.1:-20825437 MS.gene61782:CDS
TGTTTCTCACAGCCCCGTCC+TGG 0.446692 3.1:-20825386 MS.gene61782:CDS
CTTCTGGTATGTCCGTCAAA+AGG 0.447129 3.1:-20826611 MS.gene61782:CDS
CCCCTATTGGAAAAGCTGAT+TGG 0.449350 3.1:-20824911 MS.gene61782:CDS
AGACATGACATTTGTGTTGA+TGG 0.450745 3.1:+20825178 None:intergenic
TCAATTCGGTGGATGCTAAT+GGG 0.451393 3.1:-20826372 MS.gene61782:CDS
AAATGAAGAGCTGGCACATT+GGG 0.453972 3.1:+20825539 None:intergenic
AGCTTATGGGGAACAACAAT+AGG 0.455127 3.1:+20826322 None:intergenic
AAAAGGGGCTTGCAGACGTT+CGG 0.457342 3.1:-20825885 MS.gene61782:CDS
TTGGGTCCCCTGTTAACTCC+TGG 0.457724 3.1:-20824950 MS.gene61782:CDS
TTCTCCCCAGGATGCACAAA+AGG 0.458180 3.1:+20825968 None:intergenic
AGACAGCAGATTTGTGTGTT+GGG 0.461702 3.1:+20825237 None:intergenic
TTGGCTTGAGCAACTGCAGC+TGG 0.464022 3.1:-20824673 MS.gene61782:CDS
CTGTGCTGCCTCAAGTGGTT+CGG 0.464047 3.1:-20826443 MS.gene61782:CDS
AAGGCTCTGCAAAGACGGTA+TGG 0.467673 3.1:-20825801 MS.gene61782:CDS
CGTCCGCTGTATGTGTCCAC+TGG 0.470219 3.1:-20825731 MS.gene61782:CDS
GACTGAAATAGCACCAGGAC+GGG 0.471789 3.1:+20825373 None:intergenic
CTTTATCATCTGCTGAAAAT+GGG 0.474367 3.1:-20826183 MS.gene61782:CDS
GAAAATACAGAAGCCGCGGC+AGG 0.477087 3.1:+20825260 None:intergenic
TCCTCTTCATCCGCGGCTGA+AGG 0.477213 3.1:-20826784 MS.gene61782:CDS
TAATGGTGGCTGCTTCCTAT+GGG 0.478863 3.1:-20826552 MS.gene61782:CDS
TGATGGGCGATAAGGAGCTT+TGG 0.481801 3.1:+20825195 None:intergenic
TTCTGGTATGTCCGTCAAAA+GGG 0.484629 3.1:-20826610 MS.gene61782:CDS
CCTCTATCCCCATCTGCAAA+TGG 0.492687 3.1:-20825581 MS.gene61782:CDS
GCATTATTGCCATTTGCAGA+TGG 0.493990 3.1:+20825572 None:intergenic
TCTGTAAATCCAAACGACTT+TGG 0.494274 3.1:-20824888 MS.gene61782:CDS
TCTCTTATTTCATCGAGTCC+TGG 0.494292 3.1:-20826217 MS.gene61782:CDS
CATTATTGCCATTTGCAGAT+GGG 0.495177 3.1:+20825573 None:intergenic
GATCAATGCCGTCCACTTGA+GGG 0.496520 3.1:+20824712 None:intergenic
ATGATGGTGAACCAGGGAAA+AGG 0.496915 3.1:+20825639 None:intergenic
GGAAGCATGTTCGAGTAAGC+TGG 0.497010 3.1:+20826699 None:intergenic
CTATTCCACCAGGCTCAGTA+TGG 0.498689 3.1:-20825134 MS.gene61782:CDS
TGTTAACTCCTGGTCTAAGT+GGG 0.498891 3.1:-20824940 MS.gene61782:CDS
GGAACAACAATAACATCGAC+AGG 0.499757 3.1:+20826343 None:intergenic
CTTCACTGTGCTGCCTCAAG+TGG 0.502797 3.1:-20826448 MS.gene61782:CDS
CTCCTTCGAGCATTCTCCCC+AGG 0.503174 3.1:+20825956 None:intergenic
AGAAGAGCCTGATGTAGGTT+GGG 0.503303 3.1:-20824823 MS.gene61782:CDS
TTTGGAGCCACAGGAGAGGA+TGG 0.503694 3.1:+20826157 None:intergenic
CTCATGGAGTATTCGAGTGC+TGG 0.504199 3.1:-20825847 MS.gene61782:CDS
GCTGACAACCGAGAACTCAT+TGG 0.504299 3.1:+20825062 None:intergenic
AGCTGGTGCTGATATCAATT+CGG 0.504695 3.1:-20826386 MS.gene61782:CDS
CTCGTGCATACTCTCATGAT+TGG 0.506954 3.1:-20826000 MS.gene61782:CDS
CTGCAAATGGCAATAATGCT+TGG 0.507435 3.1:-20825568 MS.gene61782:CDS
CTTCCTGGTAAATGAAGAGC+TGG 0.509476 3.1:+20825530 None:intergenic
CTGTTAACTCCTGGTCTAAG+TGG 0.510095 3.1:-20824941 MS.gene61782:CDS
ATTGTTTCCATGCTCAAAAG+AGG 0.511229 3.1:+20824848 None:intergenic
CAGCCACCATTAAAGGAGTT+CGG 0.512886 3.1:+20826563 None:intergenic
ATTTGTGTTGATGGGCGATA+AGG 0.515914 3.1:+20825187 None:intergenic
CTCGATGAAATAAGAGACAT+TGG 0.516322 3.1:+20826223 None:intergenic
ATAGATCATCAAGATTTGAT+GGG 0.516680 3.1:+20825321 None:intergenic
GAGAAGAGCCTGATGTAGGT+TGG 0.517531 3.1:-20824824 MS.gene61782:CDS
TGATCAATGCCGTCCACTTG+AGG 0.517576 3.1:+20824711 None:intergenic
GTGCCAGCTCTTCATTTACC+AGG 0.519169 3.1:-20825533 MS.gene61782:CDS
CACCGAGTTCTCTTGAGCTA+AGG 0.519854 3.1:+20824994 None:intergenic
GAATGGACCCAACCTACATC+AGG 0.520252 3.1:+20824816 None:intergenic
AAGACAGCAGATTTGTGTGT+TGG 0.520972 3.1:+20825236 None:intergenic
AAGTGGGGATCATCCCCTAT+TGG 0.522495 3.1:-20824924 MS.gene61782:CDS
CATCATGTGGTGGCATATCA+CGG 0.523555 3.1:+20825468 None:intergenic
GCCTTGTCCGATACTGAGCT+GGG 0.524492 3.1:+20825819 None:intergenic
AAGAGAGACCATACTGAGCC+TGG 0.528223 3.1:+20825126 None:intergenic
GGGGATAGAGGCTGTGCAAA+GGG 0.528233 3.1:+20825593 None:intergenic
CTGAGATTTCTTCATCCCCT+CGG 0.532952 3.1:-20825292 MS.gene61782:CDS
ATATGTTGCAAGACTTTGAT+GGG 0.533657 3.1:-20825436 MS.gene61782:CDS
TTGGGTCCATTCCCTTGTCA+AGG 0.537395 3.1:-20824805 MS.gene61782:CDS
ATTATTGCCATTTGCAGATG+GGG 0.539077 3.1:+20825574 None:intergenic
GGGGACCCAACAGCTGAGAC+AGG 0.540557 3.1:+20824963 None:intergenic
TTCACGCCTTCGAGCTTATG+GGG 0.546419 3.1:+20826310 None:intergenic
GGCTACACCCAGCTCAGTAT+CGG 0.547166 3.1:-20825826 MS.gene61782:CDS
TAGCAGTAGAAGCAGCTGAT+CGG 0.547990 3.1:+20825690 None:intergenic
ACCTTCAGCCGCGGATGAAG+AGG 0.549180 3.1:+20826783 None:intergenic
ATCATGTGGTGGCATATCAC+GGG 0.550160 3.1:+20825469 None:intergenic
GACATGACATTTGTGTTGAT+GGG 0.550712 3.1:+20825179 None:intergenic
CTCTCTGACAGTGCTTCTGA+AGG 0.553902 3.1:-20826268 MS.gene61782:CDS
AATGCCGTCCACTTGAGGGT+TGG 0.553905 3.1:+20824716 None:intergenic
CGGACAAGGCTCTGCAAAGA+CGG 0.555061 3.1:-20825806 MS.gene61782:CDS
TAGGATATCAATACTCCCAT+AGG 0.558003 3.1:+20826537 None:intergenic
GAAGCAGCTGATCGGGGTGA+AGG 0.560891 3.1:+20825698 None:intergenic
ATGGTCTCTCTTCTCCTGGA+AGG 0.562685 3.1:-20825115 MS.gene61782:CDS
TGGGATCCTTGACAAGGGAA+TGG 0.563496 3.1:+20824799 None:intergenic
TACTGAGCCTGGTGGAATAG+GGG 0.568600 3.1:+20825137 None:intergenic
CGACCGACTGAAATAGCACC+AGG 0.568814 3.1:+20825368 None:intergenic
GACAGCAGATTTGTGTGTTG+GGG 0.570940 3.1:+20825238 None:intergenic
ATCATCTTCCTCTTCATCCG+CGG 0.571871 3.1:-20826791 MS.gene61782:CDS
AGGCTCTGCAAAGACGGTAT+GGG 0.573441 3.1:-20825800 MS.gene61782:CDS
CGTCCTGGTGCTATTTCAGT+CGG 0.576475 3.1:-20825371 MS.gene61782:CDS
GAGAAATTAACATCAGCCTC+AGG 0.578710 3.1:+20826496 None:intergenic
GATATGTGTGAATATGCTCA+TGG 0.578959 3.1:-20825863 MS.gene61782:CDS
TGCTTCTACTGCTAATGTCA+TGG 0.583456 3.1:-20825681 MS.gene61782:CDS
AAAGAATCCCAACCCTCAAG+TGG 0.585936 3.1:-20824724 MS.gene61782:CDS
TGGGTCTCCATCCTCTCCTG+TGG 0.587335 3.1:-20826164 MS.gene61782:CDS
CCGAGAACTCATTGGAGAGA+GGG 0.587752 3.1:+20825070 None:intergenic
AGCATTAACCGAACCACTTG+AGG 0.589777 3.1:+20826435 None:intergenic
GATAAAGGAGCAGTTGAACC+AGG 0.590443 3.1:+20826199 None:intergenic
AGAGCTGGCACATTGGGCTG+TGG 0.592460 3.1:+20825545 None:intergenic
AATGGAGAAGAGCCTGATGT+AGG 0.593112 3.1:-20824828 MS.gene61782:CDS
GTTTCCATGCTCAAAAGAGG+TGG 0.593600 3.1:+20824851 None:intergenic
TGTAGAATTAACAGCTGAGT+CGG 0.595082 3.1:+20826129 None:intergenic
TGAGAGTATGCACGAGAACA+AGG 0.597066 3.1:+20826007 None:intergenic
CGGCAGGGTCAGAATACCGA+GGG 0.597848 3.1:+20825276 None:intergenic
AGCCTTAGCTCAAGAGAACT+CGG 0.599033 3.1:-20824996 MS.gene61782:CDS
GGATGATCCCCACTTAGACC+AGG 0.599519 3.1:+20824932 None:intergenic
AGCTGTAGTGAAACTTTCTA+GGG 0.601845 3.1:+20825930 None:intergenic
CAGGTGTGGGATCCTTGACA+AGG 0.602748 3.1:+20824793 None:intergenic
GACATCAAAGAGATTGATGA+TGG 0.604648 3.1:+20825623 None:intergenic
ACGGTATGGGTTGTAACCGA+AGG 0.606397 3.1:-20825787 MS.gene61782:CDS
AATCCCAACCCTCAAGTGGA+CGG 0.608931 3.1:-20824720 MS.gene61782:CDS
TGGGGATAGAGGCTGTGCAA+AGG 0.609012 3.1:+20825592 None:intergenic
GTTAGTTGAAGGATGTGCGG+TGG 0.611454 3.1:-20826844 None:intergenic
CGGTATGGGTTGTAACCGAA+GGG 0.616814 3.1:-20825786 MS.gene61782:CDS
AAAATACAGAAGCCGCGGCA+GGG 0.617946 3.1:+20825261 None:intergenic
ACTTAGACCAGGAGTTAACA+GGG 0.618370 3.1:+20824943 None:intergenic
CGACTGAAATAGCACCAGGA+CGG 0.619234 3.1:+20825372 None:intergenic
GTTGTTCCCCATAAGCTCGA+AGG 0.619870 3.1:-20826316 MS.gene61782:CDS
TAAATGAAGAGCTGGCACAT+TGG 0.622782 3.1:+20825538 None:intergenic
TGAAGGAACAGCAGATCCAG+TGG 0.625826 3.1:+20825715 None:intergenic
GCTGATGTTAATTTCTCCTG+TGG 0.627824 3.1:-20826490 MS.gene61782:CDS
TAGATCATCAAGATTTGATG+GGG 0.628777 3.1:+20825322 None:intergenic
TACTGCTAATGTCATGGACA+TGG 0.629491 3.1:-20825675 MS.gene61782:CDS
TCAGTTAGTTGAAGGATGTG+CGG 0.631849 3.1:-20826847 None:intergenic
GTTAACTCCTGGTCTAAGTG+GGG 0.631889 3.1:-20824939 MS.gene61782:CDS
GCAGTAGAAGCAGCTGATCG+GGG 0.631967 3.1:+20825692 None:intergenic
ACCGAGAACTCATTGGAGAG+AGG 0.634355 3.1:+20825069 None:intergenic
GCACCGAACTCCTTTAATGG+TGG 0.636101 3.1:-20826566 MS.gene61782:CDS
AGAGCATCCCCTATTCCACC+AGG 0.647565 3.1:-20825144 MS.gene61782:CDS
ACTGAAATAGCACCAGGACG+GGG 0.653843 3.1:+20825374 None:intergenic
ACCCAGCTCAGTATCGGACA+AGG 0.655881 3.1:-20825820 MS.gene61782:CDS
TGAAGTTGAACCTTCAGCCG+CGG 0.657656 3.1:+20826774 None:intergenic
GCTTATACTCTCATATCCTG+AGG 0.665811 3.1:-20826512 MS.gene61782:CDS
TGGGGAAAATACAGAAGCCG+CGG 0.666181 3.1:+20825256 None:intergenic
AGATTGATGATGGTGAACCA+GGG 0.666625 3.1:+20825633 None:intergenic
TCGGTATTCTGACCCTGCCG+CGG 0.669451 3.1:-20825273 MS.gene61782:CDS
GAACCTTGAATGAATACATG+CGG 0.683334 3.1:+20826032 None:intergenic
ATCCTGGGGAGAATGCTCGA+AGG 0.683830 3.1:-20825958 MS.gene61782:CDS
AGGTGTGGGATCCTTGACAA+GGG 0.686726 3.1:+20824794 None:intergenic
ATACATGCGGAATTCATCTG+TGG 0.687672 3.1:+20826045 None:intergenic
GCGGCAGGGTCAGAATACCG+AGG 0.701862 3.1:+20825275 None:intergenic
AGAGACCATACTGAGCCTGG+TGG 0.702718 3.1:+20825129 None:intergenic
TGGTGCTGATATCAATTCGG+TGG 0.710852 3.1:-20826383 MS.gene61782:CDS
TTGTTGAAGTCATCATGTGG+TGG 0.717272 3.1:+20825458 None:intergenic
GAACAACAATAACATCGACA+GGG 0.720452 3.1:+20826344 None:intergenic
GATCCAGTGGACACATACAG+CGG 0.722026 3.1:+20825728 None:intergenic
ATATTGTTGAAGTCATCATG+TGG 0.759408 3.1:+20825455 None:intergenic
CTTAGACCAGGAGTTAACAG+GGG 0.765437 3.1:+20824944 None:intergenic
GGCAGGGTCAGAATACCGAG+GGG 0.768209 3.1:+20825277 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AATAGATCATCAAGATTTGA+TGG + chr3.1:20826171-20826190 None:intergenic 25.0%
! ATAGATCATCAAGATTTGAT+GGG + chr3.1:20826170-20826189 None:intergenic 25.0%
! GAAATCTTCAAAATCATTGT+TGG + chr3.1:20824813-20824832 None:intergenic 25.0%
!!! ATAAAATTGCTTTTATCAGC+TGG - chr3.1:20825085-20825104 MS.gene61782:CDS 25.0%
!!! CAATGATTTTGAAGATTTCA+AGG - chr3.1:20824814-20824833 MS.gene61782:CDS 25.0%
AATATGTTGCAAGACTTTGA+TGG - chr3.1:20826051-20826070 MS.gene61782:CDS 30.0%
ATATGTTGCAAGACTTTGAT+GGG - chr3.1:20826052-20826071 MS.gene61782:CDS 30.0%
ATATTGTTGAAGTCATCATG+TGG + chr3.1:20826036-20826055 None:intergenic 30.0%
CTTTATCATCTGCTGAAAAT+GGG - chr3.1:20825305-20825324 MS.gene61782:CDS 30.0%
GCTTCACTTATTAATGAAGT+TGG - chr3.1:20824854-20824873 MS.gene61782:CDS 30.0%
TAAGCTGGAAAAAGAATCAT+CGG + chr3.1:20824777-20824796 None:intergenic 30.0%
TAGATCATCAAGATTTGATG+GGG + chr3.1:20826169-20826188 None:intergenic 30.0%
! GATATGAGAGTATAAGCTTT+AGG + chr3.1:20824973-20824992 None:intergenic 30.0%
! TTATTAATGAAGTTGGCTTC+TGG - chr3.1:20824861-20824880 MS.gene61782:CDS 30.0%
! TTTTTATGTCAGGAAGAGAT+GGG + chr3.1:20825411-20825430 None:intergenic 30.0%
!!! TACATGCTGTTTTTTATGTC+AGG + chr3.1:20825421-20825440 None:intergenic 30.0%
!!! TTTTTTATGTCAGGAAGAGA+TGG + chr3.1:20825412-20825431 None:intergenic 30.0%
AGACATGACATTTGTGTTGA+TGG + chr3.1:20826313-20826332 None:intergenic 35.0%
AGCTGTAGTGAAACTTTCTA+GGG + chr3.1:20825561-20825580 None:intergenic 35.0%
ATTCCGCATGTATTCATTCA+AGG - chr3.1:20825453-20825472 MS.gene61782:CDS 35.0%
ATTGTTTCCATGCTCAAAAG+AGG + chr3.1:20826643-20826662 None:intergenic 35.0%
CCTTTATCATCTGCTGAAAA+TGG - chr3.1:20825304-20825323 MS.gene61782:CDS 35.0%
CTAGTTTGATTAATGCTTCC+TGG + chr3.1:20825976-20825995 None:intergenic 35.0%
CTCGATGAAATAAGAGACAT+TGG + chr3.1:20825268-20825287 None:intergenic 35.0%
GAACAACAATAACATCGACA+GGG + chr3.1:20825147-20825166 None:intergenic 35.0%
GAACCTTGAATGAATACATG+CGG + chr3.1:20825459-20825478 None:intergenic 35.0%
GACATCAAAGAGATTGATGA+TGG + chr3.1:20825868-20825887 None:intergenic 35.0%
GATATGTGTGAATATGCTCA+TGG - chr3.1:20825625-20825644 MS.gene61782:CDS 35.0%
TAGGATATCAATACTCCCAT+AGG + chr3.1:20824954-20824973 None:intergenic 35.0%
TCTGTAAATCCAAACGACTT+TGG - chr3.1:20826600-20826619 MS.gene61782:CDS 35.0%
TGTAGAATTAACAGCTGAGT+CGG + chr3.1:20825362-20825381 None:intergenic 35.0%
! ACCAATCAGCTTTTCCAATA+GGG + chr3.1:20826581-20826600 None:intergenic 35.0%
! ATTATTGCCATTTGCAGATG+GGG + chr3.1:20825917-20825936 None:intergenic 35.0%
! CATTATTGCCATTTGCAGAT+GGG + chr3.1:20825918-20825937 None:intergenic 35.0%
! CCATTTTCAGCAGATGATAA+AGG + chr3.1:20825307-20825326 None:intergenic 35.0%
! GACATGACATTTGTGTTGAT+GGG + chr3.1:20826312-20826331 None:intergenic 35.0%
! TCTTTTGAGCATGGAAACAA+TGG - chr3.1:20826642-20826661 MS.gene61782:CDS 35.0%
! TTCTTTTCAGCAGATGGAAT+CGG + chr3.1:20826750-20826769 None:intergenic 35.0%
! TTTGGTTAGATCCCTTTTGA+CGG + chr3.1:20824892-20824911 None:intergenic 35.0%
!! ATGCCCTGATTTTAGAAAAG+GGG - chr3.1:20825588-20825607 MS.gene61782:CDS 35.0%
!! CATGCCCTGATTTTAGAAAA+GGG - chr3.1:20825587-20825606 MS.gene61782:CDS 35.0%
!!! AAGCCCCTTTTCTAAAATCA+GGG + chr3.1:20825594-20825613 None:intergenic 35.0%
AAATGAAGAGCTGGCACATT+GGG + chr3.1:20825952-20825971 None:intergenic 40.0%
AAGACAGCAGATTTGTGTGT+TGG + chr3.1:20826255-20826274 None:intergenic 40.0%
ACTTAGACCAGGAGTTAACA+GGG + chr3.1:20826548-20826567 None:intergenic 40.0%
AGACAGCAGATTTGTGTGTT+GGG + chr3.1:20826254-20826273 None:intergenic 40.0%
AGCTTATGGGGAACAACAAT+AGG + chr3.1:20825169-20825188 None:intergenic 40.0%
ATACATGCGGAATTCATCTG+TGG + chr3.1:20825446-20825465 None:intergenic 40.0%
CAGCTGTAGTGAAACTTTCT+AGG + chr3.1:20825562-20825581 None:intergenic 40.0%
CTGCAAATGGCAATAATGCT+TGG - chr3.1:20825920-20825939 MS.gene61782:CDS 40.0%
GAGAAATTAACATCAGCCTC+AGG + chr3.1:20824995-20825014 None:intergenic 40.0%
GCTGATGTTAATTTCTCCTG+TGG - chr3.1:20824998-20825017 MS.gene61782:CDS 40.0%
GCTTATACTCTCATATCCTG+AGG - chr3.1:20824976-20824995 MS.gene61782:CDS 40.0%
GGAACAACAATAACATCGAC+AGG + chr3.1:20825148-20825167 None:intergenic 40.0%
TAAATGAAGAGCTGGCACAT+TGG + chr3.1:20825953-20825972 None:intergenic 40.0%
TACTGCTAATGTCATGGACA+TGG - chr3.1:20825813-20825832 MS.gene61782:CDS 40.0%
TGCTTCTACTGCTAATGTCA+TGG - chr3.1:20825807-20825826 MS.gene61782:CDS 40.0%
TGTGTTTGACCAAAGTCGTT+TGG + chr3.1:20826612-20826631 None:intergenic 40.0%
TGTTAACTCCTGGTCTAAGT+GGG - chr3.1:20826548-20826567 MS.gene61782:CDS 40.0%
TTCTCTTTCTTCTCAGGTGT+GGG + chr3.1:20826711-20826730 None:intergenic 40.0%
TTCTGGTATGTCCGTCAAAA+GGG - chr3.1:20824878-20824897 MS.gene61782:CDS 40.0%
TTGTTGAAGTCATCATGTGG+TGG + chr3.1:20826033-20826052 None:intergenic 40.0%
! ACAGCTGAGTCGGTAAATTT+TGG + chr3.1:20825352-20825371 None:intergenic 40.0%
! AGTGCTTTTATCAGTTCCAC+AGG + chr3.1:20825017-20825036 None:intergenic 40.0%
! ATCAATTCGGTGGATGCTAA+TGG - chr3.1:20825115-20825134 MS.gene61782:CDS 40.0%
! ATTTGTGTTGATGGGCGATA+AGG + chr3.1:20826304-20826323 None:intergenic 40.0%
! CCAATCAGCTTTTCCAATAG+GGG + chr3.1:20826580-20826599 None:intergenic 40.0%
! GACCAATCAGCTTTTCCAAT+AGG + chr3.1:20826582-20826601 None:intergenic 40.0%
! GCATTATTGCCATTTGCAGA+TGG + chr3.1:20825919-20825938 None:intergenic 40.0%
! TCAATTCGGTGGATGCTAAT+GGG - chr3.1:20825116-20825135 MS.gene61782:CDS 40.0%
! TCTCTTATTTCATCGAGTCC+TGG - chr3.1:20825271-20825290 MS.gene61782:CDS 40.0%
! TCTTTTCAGCAGATGGAATC+GGG + chr3.1:20826749-20826768 None:intergenic 40.0%
! TTGGGATTCTTTTCAGCAGA+TGG + chr3.1:20826756-20826775 None:intergenic 40.0%
!! AGATTGATGATGGTGAACCA+GGG + chr3.1:20825858-20825877 None:intergenic 40.0%
!! AGCTGGTGCTGATATCAATT+CGG - chr3.1:20825102-20825121 MS.gene61782:CDS 40.0%
!! CCATGCCCTGATTTTAGAAA+AGG - chr3.1:20825586-20825605 MS.gene61782:CDS 40.0%
!! TTCGGTGCTCAAGAACAATT+TGG + chr3.1:20824910-20824929 None:intergenic 40.0%
!!! ATGGGGTTAGTGTTTTAGAG+CGG + chr3.1:20826152-20826171 None:intergenic 40.0%
!!! CAAGCCCCTTTTCTAAAATC+AGG + chr3.1:20825595-20825614 None:intergenic 40.0%
!!! CCTTTTCTAAAATCAGGGCA+TGG + chr3.1:20825589-20825608 None:intergenic 40.0%
!!! GAGAGTGATTTTGATTCGTC+AGG + chr3.1:20824671-20824690 None:intergenic 40.0%
!!! GGCATTGATCACTCTGTTTT+GGG - chr3.1:20826789-20826808 MS.gene61782:CDS 40.0%
AAAGAATCCCAACCCTCAAG+TGG - chr3.1:20826764-20826783 MS.gene61782:CDS 45.0%
AAAGAGAAGCTTGCAGGTTC+TGG - chr3.1:20826723-20826742 MS.gene61782:CDS 45.0%
AACAATCCTGTCTCAGCTGT+TGG - chr3.1:20826519-20826538 MS.gene61782:CDS 45.0%
AAGGATGTCGCCAAGAAGTA+TGG - chr3.1:20826392-20826411 MS.gene61782:CDS 45.0%
AATGGAGAAGAGCCTGATGT+AGG - chr3.1:20826660-20826679 MS.gene61782:CDS 45.0%
ACAATCCTGTCTCAGCTGTT+GGG - chr3.1:20826520-20826539 MS.gene61782:CDS 45.0%
AGAAGAGCCTGATGTAGGTT+GGG - chr3.1:20826665-20826684 MS.gene61782:CDS 45.0%
AGCATTAACCGAACCACTTG+AGG + chr3.1:20825056-20825075 None:intergenic 45.0%
AGCCTTAGCTCAAGAGAACT+CGG - chr3.1:20826492-20826511 MS.gene61782:CDS 45.0%
ATACTGAGCCTGGTGGAATA+GGG + chr3.1:20826355-20826374 None:intergenic 45.0%
ATCATCTTCCTCTTCATCCG+CGG - chr3.1:20824697-20824716 MS.gene61782:CDS 45.0%
ATCATGTGGTGGCATATCAC+GGG + chr3.1:20826022-20826041 None:intergenic 45.0%
CACTTAGACCAGGAGTTAAC+AGG + chr3.1:20826549-20826568 None:intergenic 45.0%
CAGCCACCATTAAAGGAGTT+CGG + chr3.1:20824928-20824947 None:intergenic 45.0%
CATCATGTGGTGGCATATCA+CGG + chr3.1:20826023-20826042 None:intergenic 45.0%
CCCCTATTGGAAAAGCTGAT+TGG - chr3.1:20826577-20826596 MS.gene61782:CDS 45.0%
CTCGTGCATACTCTCATGAT+TGG - chr3.1:20825488-20825507 MS.gene61782:CDS 45.0%
CTGAGATTTCTTCATCCCCT+CGG - chr3.1:20826196-20826215 MS.gene61782:CDS 45.0%
CTGTTAACTCCTGGTCTAAG+TGG - chr3.1:20826547-20826566 MS.gene61782:CDS 45.0%
CTTAGACCAGGAGTTAACAG+GGG + chr3.1:20826547-20826566 None:intergenic 45.0%
CTTCCTGGTAAATGAAGAGC+TGG + chr3.1:20825961-20825980 None:intergenic 45.0%
CTTCTCTTTCTTCTCAGGTG+TGG + chr3.1:20826712-20826731 None:intergenic 45.0%
CTTCTGGTATGTCCGTCAAA+AGG - chr3.1:20824877-20824896 MS.gene61782:CDS 45.0%
GACAGCAGATTTGTGTGTTG+GGG + chr3.1:20826253-20826272 None:intergenic 45.0%
GAGAAGAAAGAGAAGCTTGC+AGG - chr3.1:20826717-20826736 MS.gene61782:CDS 45.0%
GATAAAGGAGCAGTTGAACC+AGG + chr3.1:20825292-20825311 None:intergenic 45.0%
GCAAGCTTCTCTTTCTTCTC+AGG + chr3.1:20826717-20826736 None:intergenic 45.0%
GTTAACTCCTGGTCTAAGTG+GGG - chr3.1:20826549-20826568 MS.gene61782:CDS 45.0%
GTTTCCATGCTCAAAAGAGG+TGG + chr3.1:20826640-20826659 None:intergenic 45.0%
TAATGGTGGCTGCTTCCTAT+GGG - chr3.1:20824936-20824955 MS.gene61782:CDS 45.0%
TAGCAGTAGAAGCAGCTGAT+CGG + chr3.1:20825801-20825820 None:intergenic 45.0%
TAGGAAGCAGCCACCATTAA+AGG + chr3.1:20824935-20824954 None:intergenic 45.0%
TTAATGGTGGCTGCTTCCTA+TGG - chr3.1:20824935-20824954 MS.gene61782:CDS 45.0%
TTTCACGCCTTCGAGCTTAT+GGG + chr3.1:20825182-20825201 None:intergenic 45.0%
! AGATCCACCTCTTTTGAGCA+TGG - chr3.1:20826633-20826652 MS.gene61782:CDS 45.0%
! AGTGTCCTTTTGTGCATCCT+GGG - chr3.1:20825515-20825534 MS.gene61782:CDS 45.0%
! ATGATGGTGAACCAGGGAAA+AGG + chr3.1:20825852-20825871 None:intergenic 45.0%
! TGAGAGTATGCACGAGAACA+AGG + chr3.1:20825484-20825503 None:intergenic 45.0%
! TTTTCACGCCTTCGAGCTTA+TGG + chr3.1:20825183-20825202 None:intergenic 45.0%
!! AGCTTTGGAGCTGTTGAAAC+TGG + chr3.1:20826281-20826300 None:intergenic 45.0%
!! GAGATTGATGATGGTGAACC+AGG + chr3.1:20825859-20825878 None:intergenic 45.0%
!! TGAGCACCGAACTCCTTTAA+TGG - chr3.1:20824919-20824938 MS.gene61782:CDS 45.0%
!! TGGTGCTGATATCAATTCGG+TGG - chr3.1:20825105-20825124 MS.gene61782:CDS 45.0%
!!! AAATTTTGGAGCCACAGGAG+AGG + chr3.1:20825338-20825357 None:intergenic 45.0%
!!! ATCACTCTGTTTTGGGAGCT+TGG - chr3.1:20826796-20826815 MS.gene61782:CDS 45.0%
!!! CGGCATTGATCACTCTGTTT+TGG - chr3.1:20826788-20826807 MS.gene61782:CDS 45.0%
!!! TCGGTAAATTTTGGAGCCAC+AGG + chr3.1:20825343-20825362 None:intergenic 45.0%
AAAAGGGGCTTGCAGACGTT+CGG - chr3.1:20825603-20825622 MS.gene61782:CDS 50.0%
AAAATACAGAAGCCGCGGCA+GGG + chr3.1:20826230-20826249 None:intergenic 50.0%
AAGAGAGACCATACTGAGCC+TGG + chr3.1:20826365-20826384 None:intergenic 50.0%
AAGGCTCTGCAAAGACGGTA+TGG - chr3.1:20825687-20825706 MS.gene61782:CDS 50.0%
AAGTGGGGATCATCCCCTAT+TGG - chr3.1:20826564-20826583 MS.gene61782:CDS 50.0%
AATCCCAACCCTCAAGTGGA+CGG - chr3.1:20826768-20826787 MS.gene61782:CDS 50.0%
ACCGAGAACTCATTGGAGAG+AGG + chr3.1:20826422-20826441 None:intergenic 50.0%
ACTGAAATAGCACCAGGACG+GGG + chr3.1:20826117-20826136 None:intergenic 50.0%
AGCAGTAGAAGCAGCTGATC+GGG + chr3.1:20825800-20825819 None:intergenic 50.0%
AGGCTCTGCAAAGACGGTAT+GGG - chr3.1:20825688-20825707 MS.gene61782:CDS 50.0%
AGGGGATGCTCTACGTTTGT+AGG + chr3.1:20826336-20826355 None:intergenic 50.0%
AGGTGTGGGATCCTTGACAA+GGG + chr3.1:20826697-20826716 None:intergenic 50.0%
ATGGTCTCTCTTCTCCTGGA+AGG - chr3.1:20826373-20826392 MS.gene61782:CDS 50.0%
CACCGAGTTCTCTTGAGCTA+AGG + chr3.1:20826497-20826516 None:intergenic 50.0%
CAGTATGGTCTCTCTTCTCC+TGG - chr3.1:20826369-20826388 MS.gene61782:CDS 50.0%
CATACTGAGCCTGGTGGAAT+AGG + chr3.1:20826356-20826375 None:intergenic 50.0%
CCATTTGCAGATGGGGATAG+AGG + chr3.1:20825910-20825929 None:intergenic 50.0%
CCCTCTCTCCAATGAGTTCT+CGG - chr3.1:20826418-20826437 MS.gene61782:CDS 50.0%
CCGAGAACTCATTGGAGAGA+GGG + chr3.1:20826421-20826440 None:intergenic 50.0%
CCTCTATCCCCATCTGCAAA+TGG - chr3.1:20825907-20825926 MS.gene61782:CDS 50.0%
CGACTGAAATAGCACCAGGA+CGG + chr3.1:20826119-20826138 None:intergenic 50.0%
CTATTCCACCAGGCTCAGTA+TGG - chr3.1:20826354-20826373 MS.gene61782:CDS 50.0%
CTCTCTGACAGTGCTTCTGA+AGG - chr3.1:20825220-20825239 MS.gene61782:CDS 50.0%
GAATGGACCCAACCTACATC+AGG + chr3.1:20826675-20826694 None:intergenic 50.0%
GACTGAAATAGCACCAGGAC+GGG + chr3.1:20826118-20826137 None:intergenic 50.0%
GAGAAGAGCCTGATGTAGGT+TGG - chr3.1:20826664-20826683 MS.gene61782:CDS 50.0%
GAGAGGGCTTCCATACTTCT+TGG + chr3.1:20826405-20826424 None:intergenic 50.0%
GATCAATGCCGTCCACTTGA+GGG + chr3.1:20826779-20826798 None:intergenic 50.0%
GATCCAGTGGACACATACAG+CGG + chr3.1:20825763-20825782 None:intergenic 50.0%
GCACCGAACTCCTTTAATGG+TGG - chr3.1:20824922-20824941 MS.gene61782:CDS 50.0%
GCTGACAACCGAGAACTCAT+TGG + chr3.1:20826429-20826448 None:intergenic 50.0%
GTGCCAGCTCTTCATTTACC+AGG - chr3.1:20825955-20825974 MS.gene61782:CDS 50.0%
GTTGTTCCCCATAAGCTCGA+AGG - chr3.1:20825172-20825191 MS.gene61782:CDS 50.0%
TACTGAGCCTGGTGGAATAG+GGG + chr3.1:20826354-20826373 None:intergenic 50.0%
TCAGGAAGAGATGGGTCAAC+TGG + chr3.1:20825403-20825422 None:intergenic 50.0%
TGAAGGAACAGCAGATCCAG+TGG + chr3.1:20825776-20825795 None:intergenic 50.0%
TGAAGTTGAACCTTCAGCCG+CGG + chr3.1:20824717-20824736 None:intergenic 50.0%
TGATCAATGCCGTCCACTTG+AGG + chr3.1:20826780-20826799 None:intergenic 50.0%
TGGGATCCTTGACAAGGGAA+TGG + chr3.1:20826692-20826711 None:intergenic 50.0%
TGGGGAAAATACAGAAGCCG+CGG + chr3.1:20826235-20826254 None:intergenic 50.0%
TTCACGCCTTCGAGCTTATG+GGG + chr3.1:20825181-20825200 None:intergenic 50.0%
TTCTCCCCAGGATGCACAAA+AGG + chr3.1:20825523-20825542 None:intergenic 50.0%
TTGGGTCCATTCCCTTGTCA+AGG - chr3.1:20826683-20826702 MS.gene61782:CDS 50.0%
! ACGGTATGGGTTGTAACCGA+AGG - chr3.1:20825701-20825720 MS.gene61782:CDS 50.0%
! CGGTATGGGTTGTAACCGAA+GGG - chr3.1:20825702-20825721 MS.gene61782:CDS 50.0%
! CTCATGGAGTATTCGAGTGC+TGG - chr3.1:20825641-20825660 MS.gene61782:CDS 50.0%
! GAGCGAAAAAGCACACCCTT+CGG + chr3.1:20825720-20825739 None:intergenic 50.0%
! GAGTGTCCTTTTGTGCATCC+TGG - chr3.1:20825514-20825533 MS.gene61782:CDS 50.0%
! GGAAGCATGTTCGAGTAAGC+TGG + chr3.1:20824792-20824811 None:intergenic 50.0%
! GTGTCCTTTTGTGCATCCTG+GGG - chr3.1:20825516-20825535 MS.gene61782:CDS 50.0%
! TGATGGGCGATAAGGAGCTT+TGG + chr3.1:20826296-20826315 None:intergenic 50.0%
!! CGTCCTGGTGCTATTTCAGT+CGG - chr3.1:20826117-20826136 MS.gene61782:CDS 50.0%
AATGCCGTCCACTTGAGGGT+TGG + chr3.1:20826775-20826794 None:intergenic 55.0%
AGAGACCATACTGAGCCTGG+TGG + chr3.1:20826362-20826381 None:intergenic 55.0%
ATCCTGGGGAGAATGCTCGA+AGG - chr3.1:20825530-20825549 MS.gene61782:CDS 55.0%
ATGCCGTCCACTTGAGGGTT+GGG + chr3.1:20826774-20826793 None:intergenic 55.0%
CAGGTGTGGGATCCTTGACA+AGG + chr3.1:20826698-20826717 None:intergenic 55.0%
CGACCGACTGAAATAGCACC+AGG + chr3.1:20826123-20826142 None:intergenic 55.0%
CGGACAAGGCTCTGCAAAGA+CGG - chr3.1:20825682-20825701 MS.gene61782:CDS 55.0%
CTGTGCTGCCTCAAGTGGTT+CGG - chr3.1:20825045-20825064 MS.gene61782:CDS 55.0%
CTTCACTGTGCTGCCTCAAG+TGG - chr3.1:20825040-20825059 MS.gene61782:CDS 55.0%
CTTCTTGGCGACATCCTTCC+AGG + chr3.1:20826390-20826409 None:intergenic 55.0%
GAAAATACAGAAGCCGCGGC+AGG + chr3.1:20826231-20826250 None:intergenic 55.0%
GCAGTAGAAGCAGCTGATCG+GGG + chr3.1:20825799-20825818 None:intergenic 55.0%
GCCTTGTCCGATACTGAGCT+GGG + chr3.1:20825672-20825691 None:intergenic 55.0%
GGATGATCCCCACTTAGACC+AGG + chr3.1:20826559-20826578 None:intergenic 55.0%
GGCTACACCCAGCTCAGTAT+CGG - chr3.1:20825662-20825681 MS.gene61782:CDS 55.0%
GGGGATAGAGGCTGTGCAAA+GGG + chr3.1:20825898-20825917 None:intergenic 55.0%
TGGGGATAGAGGCTGTGCAA+AGG + chr3.1:20825899-20825918 None:intergenic 55.0%
TTGGGTCCCCTGTTAACTCC+TGG - chr3.1:20826538-20826557 MS.gene61782:CDS 55.0%
! ACCCAGCTCAGTATCGGACA+AGG - chr3.1:20825668-20825687 MS.gene61782:CDS 55.0%
! AGAGCATCCCCTATTCCACC+AGG - chr3.1:20826344-20826363 MS.gene61782:CDS 55.0%
! AGCCTTGTCCGATACTGAGC+TGG + chr3.1:20825673-20825692 None:intergenic 55.0%
! GCTGCTATGAGCCTTTTCCC+TGG - chr3.1:20825838-20825857 MS.gene61782:CDS 55.0%
! TTGGCTTGAGCAACTGCAGC+TGG - chr3.1:20826815-20826834 MS.gene61782:CDS 55.0%
! TTTGGAGCCACAGGAGAGGA+TGG + chr3.1:20825334-20825353 None:intergenic 55.0%
ACCTTCAGCCGCGGATGAAG+AGG + chr3.1:20824708-20824727 None:intergenic 60.0%
AGAGCTGGCACATTGGGCTG+TGG + chr3.1:20825946-20825965 None:intergenic 60.0%
CGGCAGGGTCAGAATACCGA+GGG + chr3.1:20826215-20826234 None:intergenic 60.0%
CGTCCGCTGTATGTGTCCAC+TGG - chr3.1:20825757-20825776 MS.gene61782:CDS 60.0%
CTCCTTCGAGCATTCTCCCC+AGG + chr3.1:20825535-20825554 None:intergenic 60.0%
GAAGCAGCTGATCGGGGTGA+AGG + chr3.1:20825793-20825812 None:intergenic 60.0%
GGCAGGGTCAGAATACCGAG+GGG + chr3.1:20826214-20826233 None:intergenic 60.0%
TACAGCGGACGCAGCTCTTC+AGG + chr3.1:20825748-20825767 None:intergenic 60.0%
TCCTCTTCATCCGCGGCTGA+AGG - chr3.1:20824704-20824723 MS.gene61782:CDS 60.0%
TCGGTATTCTGACCCTGCCG+CGG - chr3.1:20826215-20826234 MS.gene61782:CDS 60.0%
TGGGTCTCCATCCTCTCCTG+TGG - chr3.1:20825324-20825343 MS.gene61782:CDS 60.0%
TGTTTCTCACAGCCCCGTCC+TGG - chr3.1:20826102-20826121 MS.gene61782:CDS 60.0%
GCGGCAGGGTCAGAATACCG+AGG + chr3.1:20826216-20826235 None:intergenic 65.0%
GGGGACCCAACAGCTGAGAC+AGG + chr3.1:20826528-20826547 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 20824656 20826854 20824656 ID=MS.gene61782
chr3.1 mRNA 20824656 20826854 20824656 ID=MS.gene61782.t1;Parent=MS.gene61782
chr3.1 exon 20824656 20826854 20824656 ID=MS.gene61782.t1.exon1;Parent=MS.gene61782.t1
chr3.1 CDS 20824656 20826854 20824656 ID=cds.MS.gene61782.t1;Parent=MS.gene61782.t1
Gene Sequence

>MS.gene61782

ATGTGCGGTGGACCTGACGAATCAAAATCACTCTCAACTTCATCATCTTCCTCTTCATCCGCGGCTGAAGGTTCAACTTCAAATACTGTCAAAGACATGAAAAATCTAACTGTTCGTACCGATGATTCTTTTTCCAGCTTACTCGAACATGCTTCCAACAATGATTTTGAAGATTTCAAGGTAGCTCTAGATAGTGATGCTTCACTTATTAATGAAGTTGGCTTCTGGTATGTCCGTCAAAAGGGATCTAACCAAATTGTTCTTGAGCACCGAACTCCTTTAATGGTGGCTGCTTCCTATGGGAGTATTGATATCCTAAAGCTTATACTCTCATATCCTGAGGCTGATGTTAATTTCTCCTGTGGAACTGATAAAAGCACTGCTCTTCACTGTGCTGCCTCAAGTGGTTCGGTTAATGCTGTTGACGCTATAAAATTGCTTTTATCAGCTGGTGCTGATATCAATTCGGTGGATGCTAATGGGAAACGCCCTGTCGATGTTATTGTTGTTCCTATTGTTGTTCCCCATAAGCTCGAAGGCGTGAAAACAATTCTTGAAGAACTTCTCTCTGACAGTGCTTCTGAAGGATCTGTTGATGATTGCTCTCTTCCAATGTCTCTTATTTCATCGAGTCCTGGTTCAACTGCTCCTTTATCATCTGCTGAAAATGGGTCTCCATCCTCTCCTGTGGCTCCAAAATTTACCGACTCAGCTGTTAATTCTACATCAGAGAAGAAAGAGTATCCAGTTGACCCATCTCTTCCTGACATAAAAAACAGCATGTATGCCACAGATGAATTCCGCATGTATTCATTCAAGGTTCGTCCTTGTTCTCGTGCATACTCTCATGATTGGACAGAGTGTCCTTTTGTGCATCCTGGGGAGAATGCTCGAAGGAGAGACCCTAGAAAGTTTCACTACAGCTGTGTGCCATGCCCTGATTTTAGAAAAGGGGCTTGCAGACGTTCGGATATGTGTGAATATGCTCATGGAGTATTCGAGTGCTGGCTACACCCAGCTCAGTATCGGACAAGGCTCTGCAAAGACGGTATGGGTTGTAACCGAAGGGTGTGCTTTTTCGCTCACTCACCTGAAGAGCTGCGTCCGCTGTATGTGTCCACTGGATCTGCTGTTCCTTCACCCCGATCAGCTGCTTCTACTGCTAATGTCATGGACATGGCTGCTGCTATGAGCCTTTTCCCTGGTTCACCATCATCAATCTCTTTGATGTCTCAATCACCCTTTGCACAGCCTCTATCCCCATCTGCAAATGGCAATAATGCTTGGCCACAGCCCAATGTGCCAGCTCTTCATTTACCAGGAAGCATTAATCAAACTAGTCGTTTGAGATCTTCTCTCAGTGCCCGTGATATGCCACCACATGATGACTTCAACAATATGTTGCAAGACTTTGATGGGCAGCAGCAGATTCTGAATGACTTGAGCTGTTTCTCACAGCCCCGTCCTGGTGCTATTTCAGTCGGTCGATCTTGCCGCTCTAAAACACTAACCCCATCAAATCTTGATGATCTATTTTGTGCTGAGATTTCTTCATCCCCTCGGTATTCTGACCCTGCCGCGGCTTCTGTATTTTCCCCAACACACAAATCTGCTGTCTTCAACCAGTTTCAACAGCTCCAAAGCTCCTTATCGCCCATCAACACAAATGTCATGTCTCCTACAAACGTAGAGCATCCCCTATTCCACCAGGCTCAGTATGGTCTCTCTTCTCCTGGAAGGATGTCGCCAAGAAGTATGGAAGCCCTCTCTCCAATGAGTTCTCGGTTGTCAGCTTTTGCTCAGCGTGAGAAACAGCAGCAGCAGCAACAGCTGCGTAGCCTTAGCTCAAGAGAACTCGGTGCTAACAATCCTGTCTCAGCTGTTGGGTCCCCTGTTAACTCCTGGTCTAAGTGGGGATCATCCCCTATTGGAAAAGCTGATTGGTCTGTAAATCCAAACGACTTTGGTCAAACACAGAGATCCACCTCTTTTGAGCATGGAAACAATGGAGAAGAGCCTGATGTAGGTTGGGTCCATTCCCTTGTCAAGGATCCCACACCTGAGAAGAAAGAGAAGCTTGCAGGTTCTGGCCCGATTCCATCTGCTGAAAAGAATCCCAACCCTCAAGTGGACGGCATTGATCACTCTGTTTTGGGAGCTTGGCTTGAGCAACTGCAGCTGGATCAACTTGTAGTCTAG
Protein sequence

>MS.gene61782.t1

MCGGPDESKSLSTSSSSSSSAAEGSTSNTVKDMKNLTVRTDDSFSSLLEHASNNDFEDFKVALDSDASLINEVGFWYVRQKGSNQIVLEHRTPLMVAASYGSIDILKLILSYPEADVNFSCGTDKSTALHCAASSGSVNAVDAIKLLLSAGADINSVDANGKRPVDVIVVPIVVPHKLEGVKTILEELLSDSASEGSVDDCSLPMSLISSSPGSTAPLSSAENGSPSSPVAPKFTDSAVNSTSEKKEYPVDPSLPDIKNSMYATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRSDMCEYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAHSPEELRPLYVSTGSAVPSPRSAASTANVMDMAAAMSLFPGSPSSISLMSQSPFAQPLSPSANGNNAWPQPNVPALHLPGSINQTSRLRSSLSARDMPPHDDFNNMLQDFDGQQQILNDLSCFSQPRPGAISVGRSCRSKTLTPSNLDDLFCAEISSSPRYSDPAAASVFSPTHKSAVFNQFQQLQSSLSPINTNVMSPTNVEHPLFHQAQYGLSSPGRMSPRSMEALSPMSSRLSAFAQREKQQQQQQLRSLSSRELGANNPVSAVGSPVNSWSKWGSSPIGKADWSVNPNDFGQTQRSTSFEHGNNGEEPDVGWVHSLVKDPTPEKKEKLAGSGPIPSAEKNPNPQVDGIDHSVLGAWLEQLQLDQLVV