AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62710.t1 MTR_2g020590 86.975 714 83 3 56 759 1 714 0.0 1260
MS.gene62710.t1 MTR_4g118640 75.321 701 156 3 76 759 16 716 0.0 1061
MS.gene62710.t1 MTR_4g118640 75.000 660 148 3 76 718 16 675 0.0 993
MS.gene62710.t1 MTR_4g118640 70.043 701 148 4 76 759 16 671 0.0 966
MS.gene62710.t1 MTR_8g068265 65.306 686 210 4 99 756 23 708 0.0 896
MS.gene62710.t1 MTR_8g068300 67.079 647 200 2 123 756 62 708 0.0 892
MS.gene62710.t1 MTR_3g107740 56.135 652 267 5 122 759 60 706 0.0 713
MS.gene62710.t1 MTR_3g107740 53.502 514 220 5 122 621 60 568 1.33e-180 528
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62710.t1 AT4G15560 73.958 672 161 2 99 756 45 716 0.0 1020
MS.gene62710.t1 AT3G21500 74.068 644 147 3 114 756 50 674 0.0 981
MS.gene62710.t1 AT3G21500 74.958 599 130 3 114 711 50 629 0.0 922
MS.gene62710.t1 AT3G21500 74.791 599 130 4 114 711 50 628 0.0 916
MS.gene62710.t1 AT5G11380 51.589 661 282 8 111 756 59 696 0.0 654
MS.gene62710.t1 AT5G11380 47.909 526 234 9 111 620 59 560 3.79e-158 471
MS.gene62710.t1 AT5G11380 49.304 503 218 7 111 598 59 539 1.20e-157 469
MS.gene62710.t1 AT5G11380 48.692 497 218 7 111 592 59 533 1.24e-151 455

Find 194 sgRNAs with CRISPR-Local

Find 447 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCATGTTGTCACTGAAAA+AGG 0.249215 6.3:-7547406 MS.gene62710:CDS
CAGAATATTGTCTTGAGTTT+TGG 0.255274 6.3:-7550482 MS.gene62710:CDS
TTCTCATGTTGCTCAGTTCA+TGG 0.260981 6.3:-7545559 MS.gene62710:CDS
GTTTGGTGTGGCTGTCCTTT+TGG 0.267963 6.3:-7551154 MS.gene62710:CDS
GAGAGTGAATTTGATAGTTT+TGG 0.274045 6.3:-7549121 MS.gene62710:CDS
GAAGAAACCTACACCCCTTT+TGG 0.281281 6.3:-7550030 MS.gene62710:CDS
AGGCGAAAGAGTGGCCCTTT+TGG 0.287344 6.3:-7545763 MS.gene62710:CDS
TATGGCATGTCTACCTAATA+TGG 0.308128 6.3:-7546211 MS.gene62710:CDS
TATGAAGACTCTAACGATTA+AGG 0.310044 6.3:-7549985 MS.gene62710:intron
GGAGCCATCACCACCATATT+AGG 0.321626 6.3:+7546198 None:intergenic
CATGGCATGATTGGTGGTTC+TGG 0.323646 6.3:-7547550 MS.gene62710:CDS
GCCCTTGATGGTCTTCTTGA+TGG 0.325921 6.3:-7545537 MS.gene62710:CDS
GCTCAGTTCATGGCCCTTGA+TGG 0.326804 6.3:-7545549 MS.gene62710:CDS
GAAGGATCAATAGGAGGATT+TGG 0.330255 6.3:-7545582 MS.gene62710:CDS
AAACCTAACCTGGTTGAGTC+TGG 0.337829 6.3:+7550320 None:intergenic
CCATGGTCGATATAAATATC+TGG 0.342613 6.3:+7545157 None:intergenic
CAAAATTCTTGGACAAAGAA+AGG 0.345530 6.3:-7545071 MS.gene62710:CDS
CGTTAGAGTCTTCATATCTT+CGG 0.357380 6.3:+7549992 None:intergenic
TTGTCGATAACAAATCTTAC+TGG 0.362049 6.3:+7546291 None:intergenic
ATCCAGAGTGTTTCTCAAAC+TGG 0.373688 6.3:-7549455 MS.gene62710:CDS
AAACAAGCACACAGGCCAAA+AGG 0.378314 6.3:+7551139 None:intergenic
TGGTGGTTCTAACTATCAAT+GGG 0.383908 6.3:-7550367 MS.gene62710:CDS
GACTACATTGGTCCTGTTGA+TGG 0.387476 6.3:-7547499 MS.gene62710:CDS
ATAAAATTCTCACTGGTAGA+AGG 0.387884 6.3:-7549201 MS.gene62710:CDS
TTCCATTTGCCCGTGGAAAT+CGG 0.388002 6.3:+7546106 None:intergenic
GACGAGTAAATTGCACAAAA+AGG 0.388561 6.3:+7546906 None:intergenic
GCTGGATTTGTTGGAGAAGA+TGG 0.397017 6.3:-7546267 MS.gene62710:CDS
GTTAAGAGTCCTAAGAAAAC+TGG 0.398320 6.3:-7547439 MS.gene62710:CDS
AAGGGCCACTCTTTCGCCTT+CGG 0.398795 6.3:+7545767 None:intergenic
GCTGCAATGGGAGGTGGAAC+CGG 0.400403 6.3:-7547035 MS.gene62710:CDS
GACTGCAGGGCAGGCATTTG+AGG 0.403656 6.3:-7548373 MS.gene62710:CDS
GCTGAGCAATTAGCTGTTGC+TGG 0.407903 6.3:-7545127 MS.gene62710:CDS
ACTCTTAACTTGTTTGAGAA+TGG 0.410412 6.3:+7547453 None:intergenic
ATCGACAAAGCTGGATTTGT+TGG 0.413314 6.3:-7546276 MS.gene62710:CDS
CTTCGAGATGTTTCGATGTA+GGG 0.413316 6.3:-7546986 MS.gene62710:CDS
CTACCTACCGCGGACCTTCA+TGG 0.415412 6.3:-7548282 MS.gene62710:CDS
AGAGCACCAACTGGTGGTAT+TGG 0.417530 6.3:+7548258 None:intergenic
AAAACTGTTGCTGCTATTTG+AGG 0.418915 6.3:+7545094 None:intergenic
CTGCTGTCCCAAAGCCCAAA+AGG 0.419334 6.3:+7545748 None:intergenic
TTGGTGGTTCTAACTATCAA+TGG 0.424273 6.3:-7550368 MS.gene62710:CDS
ACAGCTAGGTCGATCGTTAA+TGG 0.425372 6.3:+7546131 None:intergenic
GTGAATATTGCTAAGGTTGA+TGG 0.425949 6.3:-7547580 MS.gene62710:CDS
GTTAGAGTCTTCATATCTTC+GGG 0.428007 6.3:+7549993 None:intergenic
GCTAAGTTTGATCCTGCAAC+TGG 0.431828 6.3:-7547161 MS.gene62710:CDS
TCTCAAACTGGAGGACATCT+AGG 0.435608 6.3:-7549443 MS.gene62710:CDS
CTTGTGGGATGTTGGCCATC+AGG 0.437600 6.3:-7549351 MS.gene62710:intron
AGGACATCTAGGATCGAATC+TGG 0.438050 6.3:-7549432 MS.gene62710:CDS
GCTGTTGCGAGCCTGCTGTT+TGG 0.438386 6.3:-7551171 MS.gene62710:CDS
TAGGAGCATTGAAAACATAA+TGG 0.438816 6.3:+7549384 None:intergenic
CCTTCGAGATGTTTCGATGT+AGG 0.439173 6.3:-7546987 MS.gene62710:CDS
TTCCGATTTCCACGGGCAAA+TGG 0.439179 6.3:-7546108 MS.gene62710:CDS
GAAGCCGACAAAAGCATTGT+TGG 0.443373 6.3:-7547065 MS.gene62710:CDS
CGAAACATCTCGAAGGGAAT+CGG 0.443552 6.3:+7546994 None:intergenic
TAGGAACTAAAACAACTTGC+GGG 0.449908 6.3:-7549497 MS.gene62710:CDS
TTTCCACGGGCAAATGGAAC+TGG 0.450138 6.3:-7546102 MS.gene62710:CDS
TTGTGCATCAGTATCCGAAA+TGG 0.455448 6.3:-7550066 MS.gene62710:CDS
ACTGATGCACAAACCCCATA+TGG 0.458213 6.3:+7550077 None:intergenic
TCTTCTTGATGGAAAATTGA+AGG 0.462055 6.3:-7545526 MS.gene62710:intron
GATACTTTACCGTATCCAAA+AGG 0.462570 6.3:+7550015 None:intergenic
TGTGCATCAGTATCCGAAAT+GGG 0.464344 6.3:-7550065 MS.gene62710:CDS
AAAAGCACAGCTCGGACAAA+AGG 0.465430 6.3:+7551199 None:intergenic
GCAGTTTGGCTCAAAAGGAC+AGG 0.469469 6.3:+7550423 None:intergenic
TGCACGTTTCTGCAAGCCAT+TGG 0.470257 6.3:-7545661 MS.gene62710:CDS
ACATGTTAACAGATAGGAAA+AGG 0.470576 6.3:-7545801 MS.gene62710:intron
ACTGTGGAAGAAGGATCAAT+AGG 0.471946 6.3:-7545591 MS.gene62710:CDS
TCAACACTATTTGAAGAACT+TGG 0.472738 6.3:-7547526 MS.gene62710:CDS
AGGCAGAAAGATGGATTAAG+TGG 0.473089 6.3:-7549160 MS.gene62710:CDS
AGATTTGTTATCGACAAAGC+TGG 0.474221 6.3:-7546285 MS.gene62710:CDS
GACCTGGTGGGATGGTGCAT+AGG 0.475596 6.3:-7551222 None:intergenic
CGAAGCAGAGATTATGCATA+TGG 0.475633 6.3:-7546169 MS.gene62710:CDS
TCCTATAGACAAAATCTTGT+GGG 0.476226 6.3:-7549366 MS.gene62710:CDS
CTGAAACGATCAACTCCTCT+TGG 0.478748 6.3:-7550387 MS.gene62710:CDS
GGCGGTGGGTAGAGATCTAA+AGG 0.482790 6.3:-7548439 MS.gene62710:CDS
GAGATTTGACTGAAGATATC+CGG 0.489301 6.3:+7548338 None:intergenic
GACAAAATCTTGTGGGATGT+TGG 0.491871 6.3:-7549359 MS.gene62710:CDS
AGCTCAACAACAATGTCAGC+AGG 0.492313 6.3:-7549088 MS.gene62710:CDS
GAATTGCCACCAGGGAATAG+AGG 0.510992 6.3:-7546075 MS.gene62710:CDS
GGATGTGATCATGGCATGAT+TGG 0.512036 6.3:-7547559 MS.gene62710:CDS
CATAGCACCATCACCGATGA+TGG 0.512307 6.3:+7548395 None:intergenic
AACCTAACCTGGTTGAGTCT+GGG 0.512700 6.3:+7550321 None:intergenic
CCAGATATTTATATCGACCA+TGG 0.516787 6.3:-7545157 MS.gene62710:CDS
GCAACAGCTAATTGCTCAGC+TGG 0.516828 6.3:+7545130 None:intergenic
TGCTGTCCCAAAGCCCAAAA+GGG 0.518857 6.3:+7545749 None:intergenic
AAACCTCATGTGATTTCGCT+AGG 0.519301 6.3:+7545619 None:intergenic
TCAATGCTATGACCATCAAC+AGG 0.520276 6.3:+7547487 None:intergenic
CAGTTTGGCTCAAAAGGACA+GGG 0.521229 6.3:+7550424 None:intergenic
CATCTACTCAGAGCACCAAC+TGG 0.523518 6.3:+7548249 None:intergenic
CTCCTATAGACAAAATCTTG+TGG 0.525889 6.3:-7549367 MS.gene62710:CDS
ATACTTTACCGTATCCAAAA+GGG 0.529734 6.3:+7550016 None:intergenic
AGGTAAGGAGAAAACCATAT+GGG 0.531352 6.3:-7550091 MS.gene62710:CDS
CACAGCTGTGAATATTGCTA+AGG 0.531690 6.3:-7547587 MS.gene62710:CDS
GGTACTCACATCATGCTTTG+CGG 0.533753 6.3:-7547108 MS.gene62710:CDS
AACATACTTACCTTGACAAG+AGG 0.534272 6.3:+7548201 None:intergenic
TGGTGCTATGACTGCAGGGC+AGG 0.534315 6.3:-7548382 MS.gene62710:CDS
GGTGATGGTGCTATGACTGC+AGG 0.536641 6.3:-7548387 MS.gene62710:CDS
ACAACAATGTCAGCAGGGCT+AGG 0.536842 6.3:-7549082 MS.gene62710:intron
AAGGTTGATGGATGTGATCA+TGG 0.538673 6.3:-7547568 MS.gene62710:CDS
TAAATATCTGGAAACACCAT+TGG 0.539217 6.3:+7545169 None:intergenic
ATAATCTCTGCTTCGTCAGA+AGG 0.540250 6.3:+7546177 None:intergenic
AATAATGTGGTCACCATCAT+CGG 0.543548 6.3:-7548408 MS.gene62710:CDS
CATACATTGAGGCAGAAAGA+TGG 0.543587 6.3:-7549169 MS.gene62710:CDS
CTCTGAGTAGATGTCTCAGC+AGG 0.543966 6.3:-7548239 MS.gene62710:CDS
TCTACCTAATATGGTGGTGA+TGG 0.548667 6.3:-7546202 MS.gene62710:CDS
TGTGATCATGGCATGATTGG+TGG 0.549795 6.3:-7547556 MS.gene62710:CDS
TGCGAGCCTGCTGTTTGGTG+TGG 0.551029 6.3:-7551166 MS.gene62710:CDS
ATCTCGAAGGGAATCGGTGA+AGG 0.551457 6.3:+7547000 None:intergenic
ATACATGCTGCAATGGGAGG+TGG 0.551655 6.3:-7547041 MS.gene62710:CDS
TAGGTAAGGAGAAAACCATA+TGG 0.552253 6.3:-7550092 MS.gene62710:CDS
GAATAGAGGCATTCCTCTTG+AGG 0.552272 6.3:-7546061 MS.gene62710:intron
ACCGTATCCAAAAGGGGTGT+AGG 0.554410 6.3:+7550023 None:intergenic
TCCATCAAGAAGACCATCAA+GGG 0.555768 6.3:+7545536 None:intergenic
ATACTCTAACTCACCTCAAG+AGG 0.555952 6.3:+7546048 None:intergenic
AGAGGAATGCCTCTATTCCC+TGG 0.556815 6.3:+7546066 None:intergenic
AAACGATCAACTCCTCTTGG+TGG 0.558744 6.3:-7550384 MS.gene62710:CDS
CACGCTGTTACATTTGCCGC+AGG 0.559010 6.3:-7546951 MS.gene62710:CDS
CTAGCTGTTTCCGATTTCCA+CGG 0.559137 6.3:-7546116 MS.gene62710:CDS
GGACAGCCACACCAAACAGC+AGG 0.560288 6.3:+7551160 None:intergenic
TTCCATCAAGAAGACCATCA+AGG 0.560580 6.3:+7545535 None:intergenic
CGTGGAAATCGGAAACAGCT+AGG 0.561026 6.3:+7546117 None:intergenic
CTCCAGTTTGAGAAACACTC+TGG 0.562966 6.3:+7549453 None:intergenic
GCCGCAGGTCTAGCTTGTGA+AGG 0.565344 6.3:-7546936 MS.gene62710:CDS
ATTGCTCAGCTGGTGATCCA+TGG 0.566910 6.3:+7545140 None:intergenic
TATCCACATAAAATTCTCAC+TGG 0.567840 6.3:-7549208 MS.gene62710:CDS
TTGCAATCCCAGACTCAACC+AGG 0.568095 6.3:-7550328 MS.gene62710:intron
GTGACAACATGGATTAGTAC+AGG 0.569539 6.3:+7547415 None:intergenic
GTTGGAATACATGCTGCAAT+GGG 0.571998 6.3:-7547047 MS.gene62710:CDS
GAACTTGGACTTGACTACAT+TGG 0.572725 6.3:-7547511 MS.gene62710:CDS
TGTTGGAATACATGCTGCAA+TGG 0.575153 6.3:-7547048 MS.gene62710:CDS
TGGCTTGCTTGTCACGGTGG+CGG 0.576309 6.3:-7545685 MS.gene62710:CDS
TCAAAAGAACCACAATGTGT+TGG 0.576620 6.3:+7546243 None:intergenic
ACTGGTGTAGAATTGCCACC+AGG 0.577521 6.3:-7546084 MS.gene62710:CDS
TTTGAGGCAATGAATAATGC+CGG 0.578565 6.3:-7548357 MS.gene62710:CDS
GTCATAAGCTCTCTGCAAGA+AGG 0.579687 6.3:+7546884 None:intergenic
CGAATGAGCGAACGGTCCAA+TGG 0.582651 6.3:+7545645 None:intergenic
GGCAGAAAGATGGATTAAGT+GGG 0.585018 6.3:-7549159 MS.gene62710:CDS
AGCATTGAAAACATAATGGA+GGG 0.588745 6.3:+7549388 None:intergenic
TAGCTGTTTCCGATTTCCAC+GGG 0.589014 6.3:-7546115 MS.gene62710:CDS
GAGCATTGAAAACATAATGG+AGG 0.590912 6.3:+7549387 None:intergenic
ATCAGACAAACCTCTTGTCA+AGG 0.591557 6.3:-7548211 MS.gene62710:intron
GAGTACCGGTGTGGGAGCCT+TGG 0.593110 6.3:+7547124 None:intergenic
CTTGCAGAGAGCTTATGACC+AGG 0.594809 6.3:-7546880 MS.gene62710:intron
TTCGAAGGTGGTGCATGATG+TGG 0.595656 6.3:-7546328 MS.gene62710:intron
TATTATCCAGTGGAGGCCAA+TGG 0.603817 6.3:-7545185 MS.gene62710:intron
GTGGTCACCATCATCGGTGA+TGG 0.604425 6.3:-7548402 MS.gene62710:CDS
GCCTCAATATTGCAGCAACA+TGG 0.604435 6.3:-7545705 MS.gene62710:CDS
GCGGTGGGTAGAGATCTAAA+GGG 0.604452 6.3:-7548438 MS.gene62710:CDS
GTAGGAACTAAAACAACTTG+CGG 0.604690 6.3:-7549498 MS.gene62710:intron
GGACATCTAGGATCGAATCT+GGG 0.606948 6.3:-7549431 MS.gene62710:CDS
GCCATGTTGCTGCAATATTG+AGG 0.614726 6.3:+7545704 None:intergenic
ACAAAGAAAGGAGGCACTAG+AGG 0.615250 6.3:-7545059 MS.gene62710:CDS
GCAAAGCATGATGTGAGTAC+CGG 0.615355 6.3:+7547110 None:intergenic
GGAATAAGATGCATACATTG+AGG 0.616684 6.3:-7549180 MS.gene62710:CDS
GCAACATGGCTTGCTTGTCA+CGG 0.617203 6.3:-7545691 MS.gene62710:CDS
CTACATCGAAACATCTCGAA+GGG 0.619120 6.3:+7546988 None:intergenic
GTGAAGGAAGTGATTCATGC+CGG 0.621432 6.3:+7547016 None:intergenic
GCTCACCGAAGGCGAAAGAG+TGG 0.621613 6.3:-7545772 MS.gene62710:CDS
GAAGATGGTCCAACACATTG+TGG 0.623107 6.3:-7546252 MS.gene62710:CDS
ACAAGTATCGCTACCTACCG+CGG 0.628279 6.3:-7548292 MS.gene62710:CDS
GTGCATCAGTATCCGAAATG+GGG 0.629009 6.3:-7550064 MS.gene62710:CDS
TACTTTACCGTATCCAAAAG+GGG 0.632931 6.3:+7550017 None:intergenic
GTGGAAGAAGGATCAATAGG+AGG 0.634607 6.3:-7545588 MS.gene62710:CDS
AAAGGAAGAATGCTCACCGA+AGG 0.635301 6.3:-7545783 MS.gene62710:CDS
AGCAGAGATTATGCATATGG+TGG 0.641975 6.3:-7546166 MS.gene62710:CDS
TGCATCAGTATCCGAAATGG+GGG 0.642842 6.3:-7550063 MS.gene62710:CDS
GGACCATGAAGGTCCGCGGT+AGG 0.644302 6.3:+7548279 None:intergenic
ACACCAGTTCCATTTGCCCG+TGG 0.651582 6.3:+7546099 None:intergenic
CTGGTGTAGAATTGCCACCA+GGG 0.652032 6.3:-7546083 MS.gene62710:CDS
CGGTGGGTAGAGATCTAAAG+GGG 0.653145 6.3:-7548437 MS.gene62710:CDS
GGTAAGGAGAAAACCATATG+GGG 0.656189 6.3:-7550090 MS.gene62710:CDS
CATGGTCCAATACCACCAGT+TGG 0.657891 6.3:-7548264 MS.gene62710:CDS
TGCCAGCAAAACAAGCACAC+AGG 0.658343 6.3:+7551131 None:intergenic
CATGATGTGAGTACCGGTGT+GGG 0.658913 6.3:+7547116 None:intergenic
CTAGGTTGCGAATGAGCGAA+CGG 0.661008 6.3:+7545637 None:intergenic
CAACCTAGCGAAATCACATG+AGG 0.664346 6.3:-7545622 MS.gene62710:CDS
CTACTCAGAGCACCAACTGG+TGG 0.665084 6.3:+7548252 None:intergenic
CAAGACCAAGGCTCCCACAC+CGG 0.667838 6.3:-7547129 MS.gene62710:CDS
CCTACATCGAAACATCTCGA+AGG 0.669459 6.3:+7546987 None:intergenic
CAGAGTGTTTCTCAAACTGG+AGG 0.670619 6.3:-7549452 MS.gene62710:CDS
ACATGGCTTGCTTGTCACGG+TGG 0.671087 6.3:-7545688 MS.gene62710:CDS
GCTCAACAACAATGTCAGCA+GGG 0.672469 6.3:-7549087 MS.gene62710:CDS
AATTCTTGGACAAAGAAAGG+AGG 0.672979 6.3:-7545068 MS.gene62710:CDS
TGGAAAACAGTTCAAGACCA+AGG 0.680209 6.3:-7547141 MS.gene62710:CDS
ACCTTCACAAGCTAGACCTG+CGG 0.682356 6.3:+7546935 None:intergenic
GTGATGGTGCTATGACTGCA+GGG 0.687716 6.3:-7548386 MS.gene62710:CDS
GGAATACATGCTGCAATGGG+AGG 0.692170 6.3:-7547044 MS.gene62710:CDS
CTGGTGGTATTGGACCATGA+AGG 0.697503 6.3:+7548268 None:intergenic
GGCATGTCTACCTAATATGG+TGG 0.702209 6.3:-7546208 MS.gene62710:CDS
GCATGATGTGAGTACCGGTG+TGG 0.705105 6.3:+7547115 None:intergenic
GGAATGCCTCTATTCCCTGG+TGG 0.706633 6.3:+7546069 None:intergenic
TATTGGACCATGAAGGTCCG+CGG 0.710162 6.3:+7548275 None:intergenic
GGTGGTTCTAACTATCAATG+GGG 0.716011 6.3:-7550366 MS.gene62710:CDS
TGATAGTTAGAACCACCAAG+AGG 0.716360 6.3:+7550372 None:intergenic
AAAGCAGCAGACAAGTACCA+TGG 0.719356 6.3:-7547361 MS.gene62710:intron
GGTGGGTAGAGATCTAAAGG+GGG 0.788838 6.3:-7548436 MS.gene62710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATACTATGTATAATATATA+AGG - chr6.3:7549413-7549432 MS.gene62710:CDS 10.0%
!!! AAGTTTTTTTTTTTTTTGAA+CGG + chr6.3:7545514-7545533 None:intergenic 10.0%
!!! AATATAGTCAAATATTTTTT+TGG + chr6.3:7547606-7547625 None:intergenic 10.0%
!!! AATGAGAATTTTTAAATATT+TGG + chr6.3:7548435-7548454 None:intergenic 10.0%
!!! ACTTTTTAAAATTTCAAATT+TGG - chr6.3:7548408-7548427 MS.gene62710:CDS 10.0%
!!! ATGAGAATTTTTAAATATTT+GGG + chr6.3:7548434-7548453 None:intergenic 10.0%
!!! CATTTTTTTGTTAAAAAAAT+AGG + chr6.3:7546571-7546590 None:intergenic 10.0%
!!! TATTTTATTTATATAAGCTA+TGG + chr6.3:7547248-7547267 None:intergenic 10.0%
!!! TGTATAATTTTTTTTTGAAA+AGG - chr6.3:7549445-7549464 MS.gene62710:CDS 10.0%
!! AACAAAATTGAGTATAATAT+TGG + chr6.3:7546529-7546548 None:intergenic 15.0%
!! AAGTGAATTTATTCTAATAA+TGG + chr6.3:7550347-7550366 None:intergenic 15.0%
!! ACATAAAAATTAGAATACTT+GGG + chr6.3:7547581-7547600 None:intergenic 15.0%
!! ATTATTAGAATAAATTCACT+TGG - chr6.3:7550346-7550365 MS.gene62710:CDS 15.0%
!! CTTTAATTATACATATCTTT+CGG + chr6.3:7549799-7549818 None:intergenic 15.0%
!! TACATAAAAATTAGAATACT+TGG + chr6.3:7547582-7547601 None:intergenic 15.0%
!! TCATGTAATAAAATTGTTAA+TGG - chr6.3:7546687-7546706 MS.gene62710:intron 15.0%
!! TGTAGTTAAAAATTCATAAT+TGG + chr6.3:7546653-7546672 None:intergenic 15.0%
!! TTATAAAGTGTAAAAGTTAT+GGG + chr6.3:7548493-7548512 None:intergenic 15.0%
!! TTTAATTATACATATCTTTC+GGG + chr6.3:7549798-7549817 None:intergenic 15.0%
!! TTTATAAAGTGTAAAAGTTA+TGG + chr6.3:7548494-7548513 None:intergenic 15.0%
!! TTTGAAAAAATCTATGTTAT+TGG - chr6.3:7546968-7546987 MS.gene62710:CDS 15.0%
!!! ATATTATACTCAATTTTGTT+TGG - chr6.3:7546529-7546548 MS.gene62710:intron 15.0%
!!! CATAATTTGAAACTATAATA+AGG + chr6.3:7548254-7548273 None:intergenic 15.0%
!!! TAATAAAATTGTTAATGGAT+TGG - chr6.3:7546692-7546711 MS.gene62710:intron 15.0%
!!! TGCAATTTCTAAAAATATTA+GGG + chr6.3:7548347-7548366 None:intergenic 15.0%
!!! TTCTGATTTTATTTTTCTTT+TGG - chr6.3:7547537-7547556 MS.gene62710:CDS 15.0%
!!! TTGAAATTTTAAAAAGTTGA+TGG + chr6.3:7548405-7548424 None:intergenic 15.0%
!!! TTGCAATTTCTAAAAATATT+AGG + chr6.3:7548348-7548367 None:intergenic 15.0%
!!! TTTAGGAAAATTAGAATTTT+AGG + chr6.3:7548612-7548631 None:intergenic 15.0%
!! AAAAAAAAAACCAAACAAGT+TGG + chr6.3:7546000-7546019 None:intergenic 20.0%
!! AAAAAAATAGGCAATTTCTA+CGG + chr6.3:7546559-7546578 None:intergenic 20.0%
!! AATCTAATGCAATTATTTAG+TGG + chr6.3:7550375-7550394 None:intergenic 20.0%
!! AGTGTTTATTATTTACCAAT+AGG - chr6.3:7547497-7547516 MS.gene62710:CDS 20.0%
!! ATAAGAATTTCACTATAAAC+TGG - chr6.3:7546345-7546364 MS.gene62710:intron 20.0%
!! ATATTTGTATGTCATGTATT+AGG - chr6.3:7545360-7545379 MS.gene62710:intron 20.0%
!! ATCTAATGCAATTATTTAGT+GGG + chr6.3:7550374-7550393 None:intergenic 20.0%
!! CAAAAAAATGTGTAAAAACA+TGG - chr6.3:7546581-7546600 MS.gene62710:intron 20.0%
!! CTTTCTAATAATCTTCATAA+GGG + chr6.3:7550263-7550282 None:intergenic 20.0%
!! TAATAAGTGGTGAATTTATT+AGG + chr6.3:7548972-7548991 None:intergenic 20.0%
!! TAATGAACATGTAATGAATA+TGG - chr6.3:7546376-7546395 MS.gene62710:intron 20.0%
!! TATATTACACTTCAATTTGA+AGG - chr6.3:7547413-7547432 MS.gene62710:CDS 20.0%
!! TATTTGTATGTCATGTATTA+GGG - chr6.3:7545361-7545380 MS.gene62710:intron 20.0%
!! TCTATATCATTTATTGATGT+AGG - chr6.3:7546743-7546762 MS.gene62710:intron 20.0%
!! TCTTTCTAATAATCTTCATA+AGG + chr6.3:7550264-7550283 None:intergenic 20.0%
!! TTAATTATACATATCTTTCG+GGG + chr6.3:7549797-7549816 None:intergenic 20.0%
!!! ATATAGCTTTTGCAAAATTA+CGG + chr6.3:7548123-7548142 None:intergenic 20.0%
!!! ATGAGGTAATTGAAAATTTT+AGG + chr6.3:7548629-7548648 None:intergenic 20.0%
!!! ATGTTTTAAAACATACACAT+TGG - chr6.3:7548289-7548308 MS.gene62710:CDS 20.0%
!!! ATTTCTCTTTAAAACAGTTT+TGG - chr6.3:7550408-7550427 MS.gene62710:CDS 20.0%
!!! TAATTTTTTTTCCTCATTGA+CGG - chr6.3:7550937-7550956 MS.gene62710:intron 20.0%
!!! TATATTTAAACCAACTTGTT+TGG - chr6.3:7545987-7546006 MS.gene62710:intron 20.0%
!!! TTTTTTGTCAAAGATAAAGT+TGG - chr6.3:7548227-7548246 MS.gene62710:CDS 20.0%
! AAAAAACCAAACAAACAAGT+TGG + chr6.3:7546063-7546082 None:intergenic 25.0%
! AATATTGTGCTCAAATACTA+GGG - chr6.3:7546490-7546509 MS.gene62710:intron 25.0%
! ACAATATTCTGTGAATTAAG+TGG + chr6.3:7545768-7545787 None:intergenic 25.0%
! ACATCGAAGAAATTCATTTA+TGG + chr6.3:7548147-7548166 None:intergenic 25.0%
! ACTGAAAAGATATTTCCTAT+TGG + chr6.3:7547515-7547534 None:intergenic 25.0%
! ATACATGACATACAAATATG+AGG + chr6.3:7545359-7545378 None:intergenic 25.0%
! ATGTTGTACAATATGCTATA+TGG + chr6.3:7549869-7549888 None:intergenic 25.0%
! ATTATGAATGTATGTAGGTA+AGG - chr6.3:7546153-7546172 MS.gene62710:CDS 25.0%
! ATTGAATGAGCAATAATAAG+TGG + chr6.3:7548985-7549004 None:intergenic 25.0%
! CAATATTCTGTGAATTAAGT+GGG + chr6.3:7545767-7545786 None:intergenic 25.0%
! GCTTTATATTAATGCACAAT+TGG - chr6.3:7547746-7547765 MS.gene62710:intron 25.0%
! GTCTAATTATGAATGTATGT+AGG - chr6.3:7546148-7546167 MS.gene62710:CDS 25.0%
! TAAGATATCCCATATTATGA+TGG - chr6.3:7546614-7546633 MS.gene62710:intron 25.0%
! TAATTATACATATCTTTCGG+GGG + chr6.3:7549796-7549815 None:intergenic 25.0%
! TACTGTTTGGATGATAAATT+TGG - chr6.3:7548173-7548192 MS.gene62710:intron 25.0%
! TAGTATTAAATTACACTACC+TGG + chr6.3:7549400-7549419 None:intergenic 25.0%
! TCAAAAATAAACATAGCTAC+CGG - chr6.3:7545636-7545655 MS.gene62710:CDS 25.0%
! TCCATCATTAAAATTGAGAT+GGG - chr6.3:7546101-7546120 MS.gene62710:CDS 25.0%
! TCGATGTAAAATTTACTGTT+TGG - chr6.3:7548160-7548179 MS.gene62710:intron 25.0%
! TCTAACGATTAAGGTAAAAT+AGG - chr6.3:7546283-7546302 MS.gene62710:CDS 25.0%
! TGGGAAAAAAATACAAACAA+GGG + chr6.3:7545440-7545459 None:intergenic 25.0%
! TGTATATTTGAACACTTGAA+AGG + chr6.3:7546423-7546442 None:intergenic 25.0%
! TGTTGTACAATATGCTATAT+GGG + chr6.3:7549868-7549887 None:intergenic 25.0%
! TTCCATCATTAAAATTGAGA+TGG - chr6.3:7546100-7546119 MS.gene62710:CDS 25.0%
! TTTCACTATAAACTGGTTAA+TGG - chr6.3:7546352-7546371 MS.gene62710:intron 25.0%
!! AAATTCATAATTGGCTCATA+AGG + chr6.3:7546644-7546663 None:intergenic 25.0%
!! AATTCATAATTGGCTCATAA+GGG + chr6.3:7546643-7546662 None:intergenic 25.0%
!! ATTAAACCAACTTGTTTGTT+TGG - chr6.3:7546054-7546073 MS.gene62710:intron 25.0%
!! ATTCAATCAAAGCATTTGAA+TGG - chr6.3:7548586-7548605 MS.gene62710:intron 25.0%
!! GTCTCTAAATATTTTGTCTT+GGG + chr6.3:7547465-7547484 None:intergenic 25.0%
!! TGTCTCTAAATATTTTGTCT+TGG + chr6.3:7547466-7547485 None:intergenic 25.0%
!! TGTTGAACTTTTTACATTGA+CGG + chr6.3:7550816-7550835 None:intergenic 25.0%
!!! TTAGTACTAGTTGATTTTCT+AGG - chr6.3:7546994-7547013 MS.gene62710:CDS 25.0%
!!! TTCTTTTGATGTCACTTATA+TGG - chr6.3:7550030-7550049 MS.gene62710:CDS 25.0%
AAACAACCCAAAACCAATAA+AGG - chr6.3:7549575-7549594 MS.gene62710:intron 30.0%
AAACATCGCTAAAAACGTAA+AGG + chr6.3:7545566-7545585 None:intergenic 30.0%
AAATACAAACAAGGGGAAAT+CGG + chr6.3:7545432-7545451 None:intergenic 30.0%
AACATCGCTAAAAACGTAAA+GGG + chr6.3:7545565-7545584 None:intergenic 30.0%
ACATGTTAACAGATAGGAAA+AGG - chr6.3:7550458-7550477 MS.gene62710:CDS 30.0%
ATAAAATTCTCACTGGTAGA+AGG - chr6.3:7547058-7547077 MS.gene62710:CDS 30.0%
ATACTTTACCGTATCCAAAA+GGG + chr6.3:7546246-7546265 None:intergenic 30.0%
ATATTGTGCTCAAATACTAG+GGG - chr6.3:7546491-7546510 MS.gene62710:intron 30.0%
CAAAAATAAACATAGCTACC+GGG - chr6.3:7545637-7545656 MS.gene62710:CDS 30.0%
CAAAATTCTTGGACAAAGAA+AGG - chr6.3:7551188-7551207 MS.gene62710:CDS 30.0%
CAATATTGTGCTCAAATACT+AGG - chr6.3:7546489-7546508 MS.gene62710:intron 30.0%
CTTCATTCTTAAACTTTGCT+CGG + chr6.3:7548522-7548541 None:intergenic 30.0%
GGGAAAAAAATACAAACAAG+GGG + chr6.3:7545439-7545458 None:intergenic 30.0%
GGGAAGAAAAAAATACAACA+AGG - chr6.3:7549519-7549538 MS.gene62710:intron 30.0%
GTGGGAAAAAAATACAAACA+AGG + chr6.3:7545441-7545460 None:intergenic 30.0%
GTGTAAAAGTTATGGGATAA+AGG + chr6.3:7548486-7548505 None:intergenic 30.0%
GTTAGATGCAATAAGAACTA+AGG + chr6.3:7545730-7545749 None:intergenic 30.0%
TAAATATCTGGAAACACCAT+TGG + chr6.3:7551093-7551112 None:intergenic 30.0%
TACAATATGCTATATGGGAT+CGG + chr6.3:7549863-7549882 None:intergenic 30.0%
TATATTTCATGTCCATTCGA+AGG - chr6.3:7549916-7549935 MS.gene62710:intron 30.0%
TATCCACATAAAATTCTCAC+TGG - chr6.3:7547051-7547070 MS.gene62710:CDS 30.0%
TATGAAGACTCTAACGATTA+AGG - chr6.3:7546274-7546293 MS.gene62710:CDS 30.0%
TCAACACTATTTGAAGAACT+TGG - chr6.3:7548733-7548752 MS.gene62710:intron 30.0%
TCACGAAAGCTTAAATTGTT+AGG - chr6.3:7547671-7547690 MS.gene62710:intron 30.0%
TCCTATAGACAAAATCTTGT+GGG - chr6.3:7546893-7546912 MS.gene62710:CDS 30.0%
TCTTCTTGATGGAAAATTGA+AGG - chr6.3:7550733-7550752 MS.gene62710:intron 30.0%
TTCAACAAAAAAACCTAACC+TGG + chr6.3:7545952-7545971 None:intergenic 30.0%
TTGTCGATAACAAATCTTAC+TGG + chr6.3:7549971-7549990 None:intergenic 30.0%
TTGTGTTTCATATTATCCAG+TGG - chr6.3:7551064-7551083 MS.gene62710:intron 30.0%
! AGCATTGAAAACATAATGGA+GGG + chr6.3:7546874-7546893 None:intergenic 30.0%
! ATAAAGTATTCGTGCAGAAA+TGG + chr6.3:7550324-7550343 None:intergenic 30.0%
! ATGTATTAGGGTGGTTTTTA+AGG - chr6.3:7545373-7545392 MS.gene62710:intron 30.0%
! ATTCATAATTGGCTCATAAG+GGG + chr6.3:7546642-7546661 None:intergenic 30.0%
! CAGAATATTGTCTTGAGTTT+TGG - chr6.3:7545777-7545796 MS.gene62710:CDS 30.0%
! GCAACAGTTTTCAAAATTCT+TGG - chr6.3:7551177-7551196 MS.gene62710:CDS 30.0%
! TATTCCAACAATGCTTTTGT+CGG + chr6.3:7549201-7549220 None:intergenic 30.0%
! TGACATTTTACTCCAAAAAC+AGG - chr6.3:7547794-7547813 MS.gene62710:intron 30.0%
! TGTATTAGGGTGGTTTTTAA+GGG - chr6.3:7545374-7545393 MS.gene62710:intron 30.0%
! TTTTACTCCAAAAACAGGAA+TGG - chr6.3:7547799-7547818 MS.gene62710:intron 30.0%
!! ACTCTTAACTTGTTTGAGAA+TGG + chr6.3:7548809-7548828 None:intergenic 30.0%
!! GAGAGTGAATTTGATAGTTT+TGG - chr6.3:7547138-7547157 MS.gene62710:CDS 30.0%
!! GATCATATTGTTTTGCAGTT+TGG + chr6.3:7545853-7545872 None:intergenic 30.0%
!! GTTTTGACATGTTAACAGAT+AGG - chr6.3:7550452-7550471 MS.gene62710:CDS 30.0%
!! TAGGAGCATTGAAAACATAA+TGG + chr6.3:7546878-7546897 None:intergenic 30.0%
!! TCCCATCTCAATTTTAATGA+TGG + chr6.3:7546105-7546124 None:intergenic 30.0%
!!! ATTGGTTTTGGGTTGTTTTT+TGG + chr6.3:7549573-7549592 None:intergenic 30.0%
AAACCGAAAAACCCAAAAAC+AGG - chr6.3:7549654-7549673 MS.gene62710:intron 35.0%
AACATACTTACCTTGACAAG+AGG + chr6.3:7548061-7548080 None:intergenic 35.0%
AATAATGTGGTCACCATCAT+CGG - chr6.3:7547851-7547870 MS.gene62710:intron 35.0%
AATTCTTGGACAAAGAAAGG+AGG - chr6.3:7551191-7551210 MS.gene62710:CDS 35.0%
AATTTAAGCTTTCGTGAGAG+AGG + chr6.3:7547668-7547687 None:intergenic 35.0%
ACAATATGCTATATGGGATC+GGG + chr6.3:7549862-7549881 None:intergenic 35.0%
AGGTAAGGAGAAAACCATAT+GGG - chr6.3:7546168-7546187 MS.gene62710:CDS 35.0%
AGTGTCTTTCAGTTCTGTTT+GGG + chr6.3:7549773-7549792 None:intergenic 35.0%
ATCCATGTTGTCACTGAAAA+AGG - chr6.3:7548853-7548872 MS.gene62710:intron 35.0%
ATGAGGCTCTCAAAAACTAA+AGG + chr6.3:7545342-7545361 None:intergenic 35.0%
CCAGATATTTATATCGACCA+TGG - chr6.3:7551102-7551121 MS.gene62710:CDS 35.0%
CCATGGTCGATATAAATATC+TGG + chr6.3:7551105-7551124 None:intergenic 35.0%
CGTTAGAGTCTTCATATCTT+CGG + chr6.3:7546270-7546289 None:intergenic 35.0%
CTAAAGTCGCACAAATGATT+GGG + chr6.3:7550855-7550874 None:intergenic 35.0%
CTCCTATAGACAAAATCTTG+TGG - chr6.3:7546892-7546911 MS.gene62710:CDS 35.0%
GAACATGTAATGAATATGGC+AGG - chr6.3:7546380-7546399 MS.gene62710:intron 35.0%
GACGAGTAAATTGCACAAAA+AGG + chr6.3:7549356-7549375 None:intergenic 35.0%
GAGATTTGACTGAAGATATC+CGG + chr6.3:7547924-7547943 None:intergenic 35.0%
GATACTTTACCGTATCCAAA+AGG + chr6.3:7546247-7546266 None:intergenic 35.0%
GGAATAAGATGCATACATTG+AGG - chr6.3:7547079-7547098 MS.gene62710:CDS 35.0%
GTAGGAACTAAAACAACTTG+CGG - chr6.3:7546761-7546780 MS.gene62710:intron 35.0%
GTGAATATTGCTAAGGTTGA+TGG - chr6.3:7548679-7548698 MS.gene62710:intron 35.0%
GTTAAGAGTCCTAAGAAAAC+TGG - chr6.3:7548820-7548839 MS.gene62710:intron 35.0%
GTTAGAGTCTTCATATCTTC+GGG + chr6.3:7546269-7546288 None:intergenic 35.0%
TACTTTACCGTATCCAAAAG+GGG + chr6.3:7546245-7546264 None:intergenic 35.0%
TAGGAACTAAAACAACTTGC+GGG - chr6.3:7546762-7546781 MS.gene62710:intron 35.0%
TAGGTAAGGAGAAAACCATA+TGG - chr6.3:7546167-7546186 MS.gene62710:CDS 35.0%
TATGGCATGTCTACCTAATA+TGG - chr6.3:7550048-7550067 MS.gene62710:CDS 35.0%
TCAAAAGAACCACAATGTGT+TGG + chr6.3:7550019-7550038 None:intergenic 35.0%
TCTTGTCAAGGTAAGTATGT+TGG - chr6.3:7548060-7548079 MS.gene62710:intron 35.0%
TGACTTTCTACTTTCATGAC+AGG - chr6.3:7549045-7549064 MS.gene62710:intron 35.0%
TGAGGCTCTCAAAAACTAAA+GGG + chr6.3:7545341-7545360 None:intergenic 35.0%
TGCAATAAGAACTAAGGAGA+AGG + chr6.3:7545724-7545743 None:intergenic 35.0%
TGCACAATTGGATTTGTGAT+CGG - chr6.3:7547758-7547777 MS.gene62710:intron 35.0%
TGCATTAGATTGTGTATTGC+TGG - chr6.3:7550384-7550403 MS.gene62710:CDS 35.0%
TGTGAATTTCAACGTGAAAC+TGG + chr6.3:7545696-7545715 None:intergenic 35.0%
TGTTTCATATTATCCAGTGG+AGG - chr6.3:7551067-7551086 MS.gene62710:intron 35.0%
TTACCTCATTCAAGTACACT+CGG - chr6.3:7548640-7548659 MS.gene62710:intron 35.0%
TTGTATGTCATGTATTAGGG+TGG - chr6.3:7545364-7545383 MS.gene62710:intron 35.0%
! AAAACTGTTGCTGCTATTTG+AGG + chr6.3:7551168-7551187 None:intergenic 35.0%
! AAAGCTCATTTCTTTTCACG+TGG - chr6.3:7549815-7549834 MS.gene62710:intron 35.0%
! AAGCTCATTTCTTTTCACGT+GGG - chr6.3:7549816-7549835 MS.gene62710:intron 35.0%
! CTACCAGTGAGAATTTTATG+TGG + chr6.3:7547057-7547076 None:intergenic 35.0%
! TAGGAGTATAATCAACCTGA+TGG + chr6.3:7546926-7546945 None:intergenic 35.0%
! TCCCACAAGATTTTGTCTAT+AGG + chr6.3:7546897-7546916 None:intergenic 35.0%
! TCTAAAGTCGCACAAATGAT+TGG + chr6.3:7550856-7550875 None:intergenic 35.0%
! TTTGAGGCAATGAATAATGC+CGG - chr6.3:7547902-7547921 MS.gene62710:intron 35.0%
!! AAGGGGTACCATCATAATAT+GGG + chr6.3:7546625-7546644 None:intergenic 35.0%
!! AGATTTGTTATCGACAAAGC+TGG - chr6.3:7549974-7549993 MS.gene62710:intron 35.0%
!! GAGCATTGAAAACATAATGG+AGG + chr6.3:7546875-7546894 None:intergenic 35.0%
!! GTATTAGGGTGGTTTTTAAG+GGG - chr6.3:7545375-7545394 MS.gene62710:intron 35.0%
!! TAAGGGGTACCATCATAATA+TGG + chr6.3:7546626-7546645 None:intergenic 35.0%
!! TGGTGGTTCTAACTATCAAT+GGG - chr6.3:7545892-7545911 MS.gene62710:intron 35.0%
!! TTGGTGGTTCTAACTATCAA+TGG - chr6.3:7545891-7545910 MS.gene62710:intron 35.0%
!!! CTAACATGGTTTAGTTTTGC+AGG - chr6.3:7549071-7549090 MS.gene62710:intron 35.0%
!!! GAATTTGATAGTTTTGGCAC+TGG - chr6.3:7547144-7547163 MS.gene62710:CDS 35.0%
!!! GTTTCTAGCCAGAAATTTTC+AGG - chr6.3:7547222-7547241 MS.gene62710:intron 35.0%
!!! TGAGTTTTGGTGTTCTATCA+TGG - chr6.3:7545790-7545809 MS.gene62710:CDS 35.0%
!!! TTTTGGGTTGTTTTTTGGTG+TGG + chr6.3:7549568-7549587 None:intergenic 35.0%
!!! TTTTGGGTTTTTCGGTTTTG+AGG + chr6.3:7549652-7549671 None:intergenic 35.0%
!!! TTTTTTTTCCTCATTGACGG+CGG - chr6.3:7550940-7550959 MS.gene62710:intron 35.0%
AAACCTCATGTGATTTCGCT+AGG + chr6.3:7550643-7550662 None:intergenic 40.0%
AAAGGGGGACAACAATAATG+TGG - chr6.3:7547838-7547857 MS.gene62710:intron 40.0%
ACTGTGGAAGAAGGATCAAT+AGG - chr6.3:7550668-7550687 MS.gene62710:intron 40.0%
AGCAGAGATTATGCATATGG+TGG - chr6.3:7550093-7550112 MS.gene62710:intron 40.0%
AGCTATGGCCTGAAAATTTC+TGG + chr6.3:7547233-7547252 None:intergenic 40.0%
ATAATCTCTGCTTCGTCAGA+AGG + chr6.3:7550085-7550104 None:intergenic 40.0%
ATACTCTAACTCACCTCAAG+AGG + chr6.3:7550214-7550233 None:intergenic 40.0%
ATCAGACAAACCTCTTGTCA+AGG - chr6.3:7548048-7548067 MS.gene62710:intron 40.0%
ATCGACAAAGCTGGATTTGT+TGG - chr6.3:7549983-7550002 MS.gene62710:intron 40.0%
ATTGCATCTAACACAGCTTC+TGG - chr6.3:7545738-7545757 MS.gene62710:CDS 40.0%
ATTTCATGTCCATTCGAAGG+TGG - chr6.3:7549919-7549938 MS.gene62710:intron 40.0%
CACAGCTGTGAATATTGCTA+AGG - chr6.3:7548672-7548691 MS.gene62710:intron 40.0%
CATACATTGAGGCAGAAAGA+TGG - chr6.3:7547090-7547109 MS.gene62710:CDS 40.0%
CGAAGCAGAGATTATGCATA+TGG - chr6.3:7550090-7550109 MS.gene62710:CDS 40.0%
CTACATCGAAACATCTCGAA+GGG + chr6.3:7549274-7549293 None:intergenic 40.0%
CTTCGAGATGTTTCGATGTA+GGG - chr6.3:7549273-7549292 MS.gene62710:intron 40.0%
GAACTTGGACTTGACTACAT+TGG - chr6.3:7548748-7548767 MS.gene62710:intron 40.0%
GAAGGATCAATAGGAGGATT+TGG - chr6.3:7550677-7550696 MS.gene62710:intron 40.0%
GACAAAATCTTGTGGGATGT+TGG - chr6.3:7546900-7546919 MS.gene62710:CDS 40.0%
GAGGCTCTCAAAAACTAAAG+GGG + chr6.3:7545340-7545359 None:intergenic 40.0%
GAGTGTCTTTCAGTTCTGTT+TGG + chr6.3:7549774-7549793 None:intergenic 40.0%
GGTAAGGAGAAAACCATATG+GGG - chr6.3:7546169-7546188 MS.gene62710:CDS 40.0%
GTTGGAATACATGCTGCAAT+GGG - chr6.3:7549212-7549231 MS.gene62710:CDS 40.0%
GTTTCTTTCCTTAGATGGCT+GGG - chr6.3:7545265-7545284 MS.gene62710:intron 40.0%
TACTCCAAAAACAGGAATGG+CGG - chr6.3:7547802-7547821 MS.gene62710:intron 40.0%
TCAATGCTATGACCATCAAC+AGG + chr6.3:7548775-7548794 None:intergenic 40.0%
TCCATCAAGAAGACCATCAA+GGG + chr6.3:7550726-7550745 None:intergenic 40.0%
TGATAGTTAGAACCACCAAG+AGG + chr6.3:7545890-7545909 None:intergenic 40.0%
TGGAAAACAGTTCAAGACCA+AGG - chr6.3:7549118-7549137 MS.gene62710:CDS 40.0%
TGTGCATCAGTATCCGAAAT+GGG - chr6.3:7546194-7546213 MS.gene62710:CDS 40.0%
TGTTGGAATACATGCTGCAA+TGG - chr6.3:7549211-7549230 MS.gene62710:CDS 40.0%
TGTTTCTTTCCTTAGATGGC+TGG - chr6.3:7545264-7545283 MS.gene62710:intron 40.0%
TTCATGACAGGCATCTAACA+TGG - chr6.3:7549057-7549076 MS.gene62710:intron 40.0%
TTCCATCAAGAAGACCATCA+AGG + chr6.3:7550727-7550746 None:intergenic 40.0%
TTCTCATGTTGCTCAGTTCA+TGG - chr6.3:7550700-7550719 MS.gene62710:intron 40.0%
TTGTAATGCCTGTTGTACCA+TGG + chr6.3:7548918-7548937 None:intergenic 40.0%
TTGTGCATCAGTATCCGAAA+TGG - chr6.3:7546193-7546212 MS.gene62710:CDS 40.0%
TTTCCGAGTGTACTTGAATG+AGG + chr6.3:7548646-7548665 None:intergenic 40.0%
! AGTACAGGACCAGTTTTCTT+AGG + chr6.3:7548832-7548851 None:intergenic 40.0%
! ATCCAGAGTGTTTCTCAAAC+TGG - chr6.3:7546804-7546823 MS.gene62710:intron 40.0%
! CTCTCTTGTGTGAATTTTGC+AGG - chr6.3:7547026-7547045 MS.gene62710:CDS 40.0%
! GGTAAGTATGTTGGCTATCA+TGG - chr6.3:7548069-7548088 MS.gene62710:intron 40.0%
! GGTCTGTTTCTTTCCTTAGA+TGG - chr6.3:7545260-7545279 MS.gene62710:intron 40.0%
! GTTGTCACTGAAAAAGGCAT+AGG - chr6.3:7548859-7548878 MS.gene62710:intron 40.0%
! TCTACCTAATATGGTGGTGA+TGG - chr6.3:7550057-7550076 MS.gene62710:CDS 40.0%
! TTGAACTGTTTTCCAGTTGC+AGG + chr6.3:7549113-7549132 None:intergenic 40.0%
!! AACAAGGTGCCGCATATATA+CGG - chr6.3:7549535-7549554 MS.gene62710:intron 40.0%
!! AAGGTTGATGGATGTGATCA+TGG - chr6.3:7548691-7548710 MS.gene62710:intron 40.0%
!! ACATGAGGTTTTGATCACTG+TGG - chr6.3:7550652-7550671 MS.gene62710:intron 40.0%
!! AGGCAGAAAGATGGATTAAG+TGG - chr6.3:7547099-7547118 MS.gene62710:CDS 40.0%
!! GGCAGAAAGATGGATTAAGT+GGG - chr6.3:7547100-7547119 MS.gene62710:CDS 40.0%
!! GGTGGTTCTAACTATCAATG+GGG - chr6.3:7545893-7545912 MS.gene62710:intron 40.0%
!! GTGACAACATGGATTAGTAC+AGG + chr6.3:7548847-7548866 None:intergenic 40.0%
!! GTTAGGTTGTGTTGCTGTTT+CGG + chr6.3:7549733-7549752 None:intergenic 40.0%
!! GTTTTGATCACTGTGGAAGA+AGG - chr6.3:7550659-7550678 MS.gene62710:intron 40.0%
!! GTTTTGCAGTTTGGCTCAAA+AGG + chr6.3:7545844-7545863 None:intergenic 40.0%
!!! CAGCCTGTTTTTGGGTTTTT+CGG + chr6.3:7549660-7549679 None:intergenic 40.0%
!!! GGTGGAATGTTATTTTGCCA+AGG - chr6.3:7545211-7545230 MS.gene62710:intron 40.0%
!!! TCGAGGCCTTTATTGGTTTT+GGG + chr6.3:7549584-7549603 None:intergenic 40.0%
!!! TGCCTTTTTCAGTGACAACA+TGG + chr6.3:7548858-7548877 None:intergenic 40.0%
!!! TTCGAGGCCTTTATTGGTTT+TGG + chr6.3:7549585-7549604 None:intergenic 40.0%
AAACAAGCACACAGGCCAAA+AGG + chr6.3:7545123-7545142 None:intergenic 45.0%
AAACCTAACCTGGTTGAGTC+TGG + chr6.3:7545942-7545961 None:intergenic 45.0%
AAACGATCAACTCCTCTTGG+TGG - chr6.3:7545875-7545894 MS.gene62710:intron 45.0%
AAAGCAGCAGACAAGTACCA+TGG - chr6.3:7548898-7548917 MS.gene62710:intron 45.0%
AAAGGAAGAATGCTCACCGA+AGG - chr6.3:7550476-7550495 MS.gene62710:CDS 45.0%
AACACAACCTAACAGCACAG+TGG - chr6.3:7549740-7549759 MS.gene62710:intron 45.0%
AACCTAACCTGGTTGAGTCT+GGG + chr6.3:7545941-7545960 None:intergenic 45.0%
AATAAAGGCCTCGAACAACG+AGG - chr6.3:7549590-7549609 MS.gene62710:intron 45.0%
ACAGCTAGGTCGATCGTTAA+TGG + chr6.3:7550131-7550150 None:intergenic 45.0%
ACTGATGCACAAACCCCATA+TGG + chr6.3:7546185-7546204 None:intergenic 45.0%
AGAAAAACAGACGTACAGCC+CGG + chr6.3:7545658-7545677 None:intergenic 45.0%
AGCTCAACAACAATGTCAGC+AGG - chr6.3:7547171-7547190 MS.gene62710:intron 45.0%
AGCTCAGTGTGATTTCGACA+AGG + chr6.3:7548099-7548118 None:intergenic 45.0%
CAACCTAGCGAAATCACATG+AGG - chr6.3:7550637-7550656 MS.gene62710:intron 45.0%
CCTACATCGAAACATCTCGA+AGG + chr6.3:7549275-7549294 None:intergenic 45.0%
CCTTCGAGATGTTTCGATGT+AGG - chr6.3:7549272-7549291 MS.gene62710:intron 45.0%
CGAAACATCTCGAAGGGAAT+CGG + chr6.3:7549268-7549287 None:intergenic 45.0%
CTCCAGTTTGAGAAACACTC+TGG + chr6.3:7546809-7546828 None:intergenic 45.0%
CTGAAACGATCAACTCCTCT+TGG - chr6.3:7545872-7545891 MS.gene62710:intron 45.0%
CTTATACTCCTCCCCCATTT+CGG + chr6.3:7546210-7546229 None:intergenic 45.0%
GAAGATGGTCCAACACATTG+TGG - chr6.3:7550007-7550026 MS.gene62710:CDS 45.0%
GACAAGTACCATGGTACAAC+AGG - chr6.3:7548907-7548926 MS.gene62710:intron 45.0%
GACTACATTGGTCCTGTTGA+TGG - chr6.3:7548760-7548779 MS.gene62710:intron 45.0%
GCAAAGCATGATGTGAGTAC+CGG + chr6.3:7549152-7549171 None:intergenic 45.0%
GCCATGTTGCTGCAATATTG+AGG + chr6.3:7550558-7550577 None:intergenic 45.0%
GCCTCAATATTGCAGCAACA+TGG - chr6.3:7550554-7550573 MS.gene62710:intron 45.0%
GCTAAGTTTGATCCTGCAAC+TGG - chr6.3:7549098-7549117 MS.gene62710:CDS 45.0%
GCTCAACAACAATGTCAGCA+GGG - chr6.3:7547172-7547191 MS.gene62710:intron 45.0%
GGATGTGATCATGGCATGAT+TGG - chr6.3:7548700-7548719 MS.gene62710:intron 45.0%
GGCATGTCTACCTAATATGG+TGG - chr6.3:7550051-7550070 MS.gene62710:CDS 45.0%
GGTACTCACATCATGCTTTG+CGG - chr6.3:7549151-7549170 MS.gene62710:CDS 45.0%
GGTGGTGTTCCGTATATATG+CGG + chr6.3:7549547-7549566 None:intergenic 45.0%
GTCATAAGCTCTCTGCAAGA+AGG + chr6.3:7549378-7549397 None:intergenic 45.0%
GTGAAGGAAGTGATTCATGC+CGG + chr6.3:7549246-7549265 None:intergenic 45.0%
GTGCATCAGTATCCGAAATG+GGG - chr6.3:7546195-7546214 MS.gene62710:CDS 45.0%
GTGGAAGAAGGATCAATAGG+AGG - chr6.3:7550671-7550690 MS.gene62710:intron 45.0%
GTTCGAGCTAGGTGATTGAT+TGG - chr6.3:7545403-7545422 MS.gene62710:intron 45.0%
TATTATCCAGTGGAGGCCAA+TGG - chr6.3:7551074-7551093 MS.gene62710:intron 45.0%
TCGTTGTTCGAGGCCTTTAT+TGG + chr6.3:7549591-7549610 None:intergenic 45.0%
TCTCAAACTGGAGGACATCT+AGG - chr6.3:7546816-7546835 MS.gene62710:intron 45.0%
TGCATCAGTATCCGAAATGG+GGG - chr6.3:7546196-7546215 MS.gene62710:CDS 45.0%
TGTGATCATGGCATGATTGG+TGG - chr6.3:7548703-7548722 MS.gene62710:intron 45.0%
TTCCATTTGCCCGTGGAAAT+CGG + chr6.3:7550156-7550175 None:intergenic 45.0%
! AAAAGCACAGCTCGGACAAA+AGG + chr6.3:7545063-7545082 None:intergenic 45.0%
! AAGGGGTTTTTGTTCGAGCT+AGG - chr6.3:7545392-7545411 MS.gene62710:intron 45.0%
! ACCTACACCCCTTTTGGATA+CGG - chr6.3:7546235-7546254 MS.gene62710:CDS 45.0%
! AGGACATCTAGGATCGAATC+TGG - chr6.3:7546827-7546846 MS.gene62710:intron 45.0%
! CAGAGTGTTTCTCAAACTGG+AGG - chr6.3:7546807-7546826 MS.gene62710:intron 45.0%
! CAGTTTGGCTCAAAAGGACA+GGG + chr6.3:7545838-7545857 None:intergenic 45.0%
! CTAGCTGTTTCCGATTTCCA+CGG - chr6.3:7550143-7550162 MS.gene62710:intron 45.0%
! GAAGAAACCTACACCCCTTT+TGG - chr6.3:7546229-7546248 MS.gene62710:CDS 45.0%
! GGACATCTAGGATCGAATCT+GGG - chr6.3:7546828-7546847 MS.gene62710:intron 45.0%
! TAGCTGTTTCCGATTTCCAC+GGG - chr6.3:7550144-7550163 MS.gene62710:intron 45.0%
! TTTGTCCGAGCTGTGCTTTT+TGG - chr6.3:7545063-7545082 MS.gene62710:CDS 45.0%
!! ACAAAGAAAGGAGGCACTAG+AGG - chr6.3:7551200-7551219 MS.gene62710:CDS 45.0%
!! GAAGCCGACAAAAGCATTGT+TGG - chr6.3:7549194-7549213 MS.gene62710:CDS 45.0%
!! GAATAGAGGCATTCCTCTTG+AGG - chr6.3:7550198-7550217 MS.gene62710:intron 45.0%
!! GCTGGATTTGTTGGAGAAGA+TGG - chr6.3:7549992-7550011 MS.gene62710:CDS 45.0%
!! GTTTGTTGGCGTGTGTGTTT+TGG - chr6.3:7545184-7545203 MS.gene62710:intron 45.0%
!! TGTTTCGGTCTATTTCTGCC+TGG + chr6.3:7549718-7549737 None:intergenic 45.0%
!!! GTTTTGGCTCTTGGATGTTG+CGG - chr6.3:7545291-7545310 MS.gene62710:intron 45.0%
!!! TGGCGTGTGTGTTTTGGTTT+CGG - chr6.3:7545190-7545209 MS.gene62710:intron 45.0%
!!! TGGGTTGTTTTTTGGTGTGG+TGG + chr6.3:7549565-7549584 None:intergenic 45.0%
!!! TGGGTTTTTCGGTTTTGAGG+CGG + chr6.3:7549649-7549668 None:intergenic 45.0%
!!! TGTGCTTGTTTTGCTGGCAA+GGG - chr6.3:7545132-7545151 MS.gene62710:CDS 45.0%
!! TTAATAATAATAACAATAAT+AGG + chr6.3:7546945-7546964 None:intergenic 5.0%
!!! ATTTTCAAAATATTAAAAAT+AGG + chr6.3:7548378-7548397 None:intergenic 5.0%
!!! ATTTTTAATATTTTGAAAAT+TGG - chr6.3:7548378-7548397 MS.gene62710:CDS 5.0%
!!! TACATTATATATTTTTTTAA+AGG - chr6.3:7546439-7546458 MS.gene62710:intron 5.0%
!!! TTTTCAAAATATTAAAAATA+GGG + chr6.3:7548377-7548396 None:intergenic 5.0%
AAAACCTGCCCAGCCATCTA+AGG + chr6.3:7545276-7545295 None:intergenic 50.0%
AACAACAGAAGCAGCACGCA+AGG - chr6.3:7549692-7549711 MS.gene62710:intron 50.0%
AAGAAACAGACCGAACCCAC+AGG + chr6.3:7545252-7545271 None:intergenic 50.0%
ACAACAATGTCAGCAGGGCT+AGG - chr6.3:7547177-7547196 MS.gene62710:intron 50.0%
ACCTTCACAAGCTAGACCTG+CGG + chr6.3:7549327-7549346 None:intergenic 50.0%
ACGCACAAAGAACTCGTGGT+AGG - chr6.3:7549498-7549517 MS.gene62710:intron 50.0%
ACTGGTGTAGAATTGCCACC+AGG - chr6.3:7550175-7550194 MS.gene62710:intron 50.0%
AGAGGAATGCCTCTATTCCC+TGG + chr6.3:7550196-7550215 None:intergenic 50.0%
ATACATGCTGCAATGGGAGG+TGG - chr6.3:7549218-7549237 MS.gene62710:intron 50.0%
ATCAGTATCCGAAATGGGGG+AGG - chr6.3:7546199-7546218 MS.gene62710:CDS 50.0%
ATCCCAGACTCAACCAGGTT+AGG - chr6.3:7545936-7545955 MS.gene62710:intron 50.0%
ATCTCGAAGGGAATCGGTGA+AGG + chr6.3:7549262-7549281 None:intergenic 50.0%
ATTGCTCAGCTGGTGATCCA+TGG + chr6.3:7551122-7551141 None:intergenic 50.0%
CAAGACGCACAAAGAACTCG+TGG - chr6.3:7549494-7549513 MS.gene62710:CDS 50.0%
CATAGCACCATCACCGATGA+TGG + chr6.3:7547867-7547886 None:intergenic 50.0%
CATCATGCACCACCTTCGAA+TGG + chr6.3:7549931-7549950 None:intergenic 50.0%
CATGGTCCAATACCACCAGT+TGG - chr6.3:7547995-7548014 MS.gene62710:intron 50.0%
CCAAAAACAGGAATGGCGGT+GGG - chr6.3:7547806-7547825 MS.gene62710:intron 50.0%
CGAGGTGCACTAATAAGCTC+GGG + chr6.3:7545463-7545482 None:intergenic 50.0%
CGCACAAAGAACTCGTGGTA+GGG - chr6.3:7549499-7549518 MS.gene62710:intron 50.0%
CGGTGGGTAGAGATCTAAAG+GGG - chr6.3:7547822-7547841 MS.gene62710:intron 50.0%
CGTGGAAATCGGAAACAGCT+AGG + chr6.3:7550145-7550164 None:intergenic 50.0%
CTAGGTTGCGAATGAGCGAA+CGG + chr6.3:7550625-7550644 None:intergenic 50.0%
CTCTGAGTAGATGTCTCAGC+AGG - chr6.3:7548020-7548039 MS.gene62710:intron 50.0%
CTGGTGTAGAATTGCCACCA+GGG - chr6.3:7550176-7550195 MS.gene62710:intron 50.0%
CTTATTAGTGCACCTCGCAC+GGG - chr6.3:7545466-7545485 MS.gene62710:intron 50.0%
CTTGCAGAGAGCTTATGACC+AGG - chr6.3:7549379-7549398 MS.gene62710:CDS 50.0%
GAATTGCCACCAGGGAATAG+AGG - chr6.3:7550184-7550203 MS.gene62710:intron 50.0%
GACTGCTGTAGCAGGTTTGT+TGG - chr6.3:7545170-7545189 MS.gene62710:CDS 50.0%
GCAACAGCTAATTGCTCAGC+TGG + chr6.3:7551132-7551151 None:intergenic 50.0%
GCGAGGTGCACTAATAAGCT+CGG + chr6.3:7545464-7545483 None:intergenic 50.0%
GCGGTGGGTAGAGATCTAAA+GGG - chr6.3:7547821-7547840 MS.gene62710:intron 50.0%
GCTGAGCAATTAGCTGTTGC+TGG - chr6.3:7551132-7551151 MS.gene62710:CDS 50.0%
GCTTATTAGTGCACCTCGCA+CGG - chr6.3:7545465-7545484 MS.gene62710:intron 50.0%
GGAATACATGCTGCAATGGG+AGG - chr6.3:7549215-7549234 MS.gene62710:intron 50.0%
GGAGCCATCACCACCATATT+AGG + chr6.3:7550064-7550083 None:intergenic 50.0%
GGTGGGTAGAGATCTAAAGG+GGG - chr6.3:7547823-7547842 MS.gene62710:intron 50.0%
GTGCACTAATAAGCTCGGGT+GGG + chr6.3:7545459-7545478 None:intergenic 50.0%
TATGGGATCGGGTGCATTAG+TGG + chr6.3:7549851-7549870 None:intergenic 50.0%
TATTCCAGCCTCGTTGTTCG+AGG + chr6.3:7549601-7549620 None:intergenic 50.0%
TATTGGACCATGAAGGTCCG+CGG + chr6.3:7547987-7548006 None:intergenic 50.0%
TCCAAAAACAGGAATGGCGG+TGG - chr6.3:7547805-7547824 MS.gene62710:intron 50.0%
TGCACGTTTCTGCAAGCCAT+TGG - chr6.3:7550598-7550617 MS.gene62710:intron 50.0%
TGCCAGCAAAACAAGCACAC+AGG + chr6.3:7545131-7545150 None:intergenic 50.0%
TGCTGTCCCAAAGCCCAAAA+GGG + chr6.3:7550513-7550532 None:intergenic 50.0%
TTCCGATTTCCACGGGCAAA+TGG - chr6.3:7550151-7550170 MS.gene62710:intron 50.0%
TTCGAAGGTGGTGCATGATG+TGG - chr6.3:7549931-7549950 MS.gene62710:intron 50.0%
TTGCAATCCCAGACTCAACC+AGG - chr6.3:7545931-7545950 MS.gene62710:intron 50.0%
TTTCCACGGGCAAATGGAAC+TGG - chr6.3:7550157-7550176 MS.gene62710:intron 50.0%
! ACAAGTATCGCTACCTACCG+CGG - chr6.3:7547967-7547986 MS.gene62710:intron 50.0%
! ACCGTATCCAAAAGGGGTGT+AGG + chr6.3:7546239-7546258 None:intergenic 50.0%
! AGAGCACCAACTGGTGGTAT+TGG + chr6.3:7548004-7548023 None:intergenic 50.0%
! AGCCACCAAAAAGCACAGCT+CGG + chr6.3:7545071-7545090 None:intergenic 50.0%
! CATCTACTCAGAGCACCAAC+TGG + chr6.3:7548013-7548032 None:intergenic 50.0%
! CATGGCATGATTGGTGGTTC+TGG - chr6.3:7548709-7548728 MS.gene62710:intron 50.0%
! CTGGTGGTATTGGACCATGA+AGG + chr6.3:7547994-7548013 None:intergenic 50.0%
! GCAGTTTGGCTCAAAAGGAC+AGG + chr6.3:7545839-7545858 None:intergenic 50.0%
! GCCCTTGATGGTCTTCTTGA+TGG - chr6.3:7550722-7550741 MS.gene62710:intron 50.0%
! TTAGATGGCTGGGCAGGTTT+TGG - chr6.3:7545275-7545294 MS.gene62710:intron 50.0%
! TTTGTGCTGCTAGAGCCTGT+GGG - chr6.3:7545234-7545253 MS.gene62710:intron 50.0%
! TTTTGTGCGACTGCTGTAGC+AGG - chr6.3:7545162-7545181 MS.gene62710:CDS 50.0%
!! CATGATGTGAGTACCGGTGT+GGG + chr6.3:7549146-7549165 None:intergenic 50.0%
!! CTGTGCAGCAGCCTGTTTTT+GGG + chr6.3:7549668-7549687 None:intergenic 50.0%
!! GCAACATGGCTTGCTTGTCA+CGG - chr6.3:7550568-7550587 MS.gene62710:intron 50.0%
!! GTGATGGTGCTATGACTGCA+GGG - chr6.3:7547873-7547892 MS.gene62710:intron 50.0%
!!! CGTGTGTGTTTTGGTTTCGG+TGG - chr6.3:7545193-7545212 MS.gene62710:intron 50.0%
!!! GCGTGCTGCTTCTGTTGTTT+TGG + chr6.3:7549691-7549710 None:intergenic 50.0%
!!! GTGTGCTTGTTTTGCTGGCA+AGG - chr6.3:7545131-7545150 MS.gene62710:CDS 50.0%
!!! GTTTGGTGTGGCTGTCCTTT+TGG - chr6.3:7545105-7545124 MS.gene62710:CDS 50.0%
!!! GTTTTTCGGTTTTGAGGCGG+TGG + chr6.3:7549646-7549665 None:intergenic 50.0%
!!! TTTTGAGGCGGTGGTATGCT+TGG + chr6.3:7549637-7549656 None:intergenic 50.0%
AAGGGCCACTCTTTCGCCTT+CGG + chr6.3:7550495-7550514 None:intergenic 55.0%
ACACCAGTTCCATTTGCCCG+TGG + chr6.3:7550163-7550182 None:intergenic 55.0%
CACGCTGTTACATTTGCCGC+AGG - chr6.3:7549308-7549327 MS.gene62710:intron 55.0%
CGAATGAGCGAACGGTCCAA+TGG + chr6.3:7550617-7550636 None:intergenic 55.0%
CTGCTGTCCCAAAGCCCAAA+AGG + chr6.3:7550514-7550533 None:intergenic 55.0%
CTTGTGGGATGTTGGCCATC+AGG - chr6.3:7546908-7546927 MS.gene62710:CDS 55.0%
CTTTCCTTAGATGGCTGGGC+AGG - chr6.3:7545269-7545288 MS.gene62710:intron 55.0%
GCTCAGTTCATGGCCCTTGA+TGG - chr6.3:7550710-7550729 MS.gene62710:intron 55.0%
GGAATGCCTCTATTCCCTGG+TGG + chr6.3:7550193-7550212 None:intergenic 55.0%
GGCGGTGGGTAGAGATCTAA+AGG - chr6.3:7547820-7547839 MS.gene62710:intron 55.0%
GGTGCACTAATAAGCTCGGG+TGG + chr6.3:7545460-7545479 None:intergenic 55.0%
GTGGTCACCATCATCGGTGA+TGG - chr6.3:7547857-7547876 MS.gene62710:intron 55.0%
! AGAGTGGCCCTTTTGGGCTT+TGG - chr6.3:7550503-7550522 MS.gene62710:intron 55.0%
! AGGCGAAAGAGTGGCCCTTT+TGG - chr6.3:7550496-7550515 MS.gene62710:intron 55.0%
! CCCACCGCCATTCCTGTTTT+TGG + chr6.3:7547809-7547828 None:intergenic 55.0%
! CTACTCAGAGCACCAACTGG+TGG + chr6.3:7548010-7548029 None:intergenic 55.0%
! CTGCTTGCCACTGTGCTGTT+AGG + chr6.3:7549750-7549769 None:intergenic 55.0%
! GAAACACCATTGGCCTCCAC+TGG + chr6.3:7551083-7551102 None:intergenic 55.0%
! GAGTGGCCCTTTTGGGCTTT+GGG - chr6.3:7550504-7550523 MS.gene62710:intron 55.0%
! GCTGTGCAGCAGCCTGTTTT+TGG + chr6.3:7549669-7549688 None:intergenic 55.0%
! GGCGAAAGAGTGGCCCTTTT+GGG - chr6.3:7550497-7550516 MS.gene62710:intron 55.0%
! GGCTCTAGCAGCACAAACCT+TGG + chr6.3:7545231-7545250 None:intergenic 55.0%
! GTTTGTGCTGCTAGAGCCTG+TGG - chr6.3:7545233-7545252 MS.gene62710:intron 55.0%
!! ACATGGCTTGCTTGTCACGG+TGG - chr6.3:7550571-7550590 MS.gene62710:intron 55.0%
!! GCATGATGTGAGTACCGGTG+TGG + chr6.3:7549147-7549166 None:intergenic 55.0%
!! GGTGATGGTGCTATGACTGC+AGG - chr6.3:7547872-7547891 MS.gene62710:intron 55.0%
!! GTCCGAGCTGTGCTTTTTGG+TGG - chr6.3:7545066-7545085 MS.gene62710:CDS 55.0%
!!! GCTTGTTTTGCTGGCAAGGG+TGG - chr6.3:7545135-7545154 MS.gene62710:CDS 55.0%
!!! GGCCTGTGTGCTTGTTTTGC+TGG - chr6.3:7545126-7545145 MS.gene62710:CDS 55.0%
AAGGCCTCGAACAACGAGGC+TGG - chr6.3:7549594-7549613 MS.gene62710:intron 60.0%
CAAGACCAAGGCTCCCACAC+CGG - chr6.3:7549130-7549149 MS.gene62710:CDS 60.0%
CAGTGTCACCGCCGTCAATG+AGG + chr6.3:7550951-7550970 None:intergenic 60.0%
CTACCTACCGCGGACCTTCA+TGG - chr6.3:7547977-7547996 MS.gene62710:intron 60.0%
GACTGCAGGGCAGGCATTTG+AGG - chr6.3:7547886-7547905 MS.gene62710:intron 60.0%
GCTCACCGAAGGCGAAAGAG+TGG - chr6.3:7550487-7550506 MS.gene62710:intron 60.0%
GCTCTTGGATGTTGCGGCTG+GGG - chr6.3:7545297-7545316 MS.gene62710:intron 60.0%
GCTGCAATGGGAGGTGGAAC+CGG - chr6.3:7549224-7549243 MS.gene62710:intron 60.0%
GCTGCTAGAGCCTGTGGGTT+CGG - chr6.3:7545239-7545258 MS.gene62710:intron 60.0%
GCTGTTGCGAGCCTGCTGTT+TGG - chr6.3:7545088-7545107 MS.gene62710:CDS 60.0%
GGACAGCCACACCAAACAGC+AGG + chr6.3:7545102-7545121 None:intergenic 60.0%
GGCTCTTGGATGTTGCGGCT+GGG - chr6.3:7545296-7545315 MS.gene62710:intron 60.0%
TGGCTCTTGGATGTTGCGGC+TGG - chr6.3:7545295-7545314 MS.gene62710:intron 60.0%
! GCCGCAGGTCTAGCTTGTGA+AGG - chr6.3:7549323-7549342 MS.gene62710:intron 60.0%
! TGCGAGCCTGCTGTTTGGTG+TGG - chr6.3:7545093-7545112 MS.gene62710:CDS 60.0%
!! TGGCTTGCTTGTCACGGTGG+CGG - chr6.3:7550574-7550593 MS.gene62710:intron 60.0%
!! TGGTGCTATGACTGCAGGGC+AGG - chr6.3:7547877-7547896 MS.gene62710:intron 60.0%
!!! GCTGGGCAGGTTTTGGCTCT+TGG - chr6.3:7545282-7545301 MS.gene62710:intron 60.0%
CAGAAGCAGCACGCAAGGCC+AGG - chr6.3:7549697-7549716 MS.gene62710:intron 65.0%
GGACCATGAAGGTCCGCGGT+AGG + chr6.3:7547983-7548002 None:intergenic 65.0%
TTAACCGACGAGCCCGTGCG+AGG + chr6.3:7545481-7545500 None:intergenic 65.0%
!! GAGTACCGGTGTGGGAGCCT+TGG + chr6.3:7549138-7549157 None:intergenic 65.0%
TGCACCTCGCACGGGCTCGT+CGG - chr6.3:7545474-7545493 MS.gene62710:intron 70.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 7545048 7551233 7545048 ID=MS.gene62710
chr6.3 mRNA 7545048 7551233 7545048 ID=MS.gene62710.t1;Parent=MS.gene62710
chr6.3 exon 7551098 7551233 7551098 ID=MS.gene62710.t1.exon1;Parent=MS.gene62710.t1
chr6.3 CDS 7551098 7551233 7551098 ID=cds.MS.gene62710.t1;Parent=MS.gene62710.t1
chr6.3 exon 7550329 7550501 7550329 ID=MS.gene62710.t1.exon2;Parent=MS.gene62710.t1
chr6.3 CDS 7550329 7550501 7550329 ID=cds.MS.gene62710.t1;Parent=MS.gene62710.t1
chr6.3 exon 7549986 7550111 7549986 ID=MS.gene62710.t1.exon3;Parent=MS.gene62710.t1
chr6.3 CDS 7549986 7550111 7549986 ID=cds.MS.gene62710.t1;Parent=MS.gene62710.t1
chr6.3 exon 7549352 7549516 7549352 ID=MS.gene62710.t1.exon4;Parent=MS.gene62710.t1
chr6.3 CDS 7549352 7549516 7549352 ID=cds.MS.gene62710.t1;Parent=MS.gene62710.t1
chr6.3 exon 7549083 7549233 7549083 ID=MS.gene62710.t1.exon5;Parent=MS.gene62710.t1
chr6.3 CDS 7549083 7549233 7549083 ID=cds.MS.gene62710.t1;Parent=MS.gene62710.t1
chr6.3 exon 7548212 7548465 7548212 ID=MS.gene62710.t1.exon6;Parent=MS.gene62710.t1
chr6.3 CDS 7548212 7548465 7548212 ID=cds.MS.gene62710.t1;Parent=MS.gene62710.t1
chr6.3 exon 7547362 7547614 7547362 ID=MS.gene62710.t1.exon7;Parent=MS.gene62710.t1
chr6.3 CDS 7547362 7547614 7547362 ID=cds.MS.gene62710.t1;Parent=MS.gene62710.t1
chr6.3 exon 7546881 7547188 7546881 ID=MS.gene62710.t1.exon8;Parent=MS.gene62710.t1
chr6.3 CDS 7546881 7547188 7546881 ID=cds.MS.gene62710.t1;Parent=MS.gene62710.t1
chr6.3 exon 7546062 7546343 7546062 ID=MS.gene62710.t1.exon9;Parent=MS.gene62710.t1
chr6.3 CDS 7546062 7546343 7546062 ID=cds.MS.gene62710.t1;Parent=MS.gene62710.t1
chr6.3 exon 7545527 7545811 7545527 ID=MS.gene62710.t1.exon10;Parent=MS.gene62710.t1
chr6.3 CDS 7545527 7545811 7545527 ID=cds.MS.gene62710.t1;Parent=MS.gene62710.t1
chr6.3 exon 7545048 7545197 7545048 ID=MS.gene62710.t1.exon11;Parent=MS.gene62710.t1
chr6.3 CDS 7545048 7545197 7545048 ID=cds.MS.gene62710.t1;Parent=MS.gene62710.t1
Gene Sequence

>MS.gene62710

ATGGTGCATAGGCCTTTTGTCCGAGCTGTGCTTTTTGGTGGCTGTTGCGAGCCTGCTGTTTGGTGTGGCTGTCCTTTTGGCCTGTGTGCTTGTTTTGCTGGCAAGGGTGGAGCTTTTTGTGCGACTGCTGTAGCAGGTTTGTTGGCGTGTGTGTTTTGGTTTCGGTGGAATGTTATTTTGCCAAGGTTTGTGCTGCTAGAGCCTGTGGGTTCGGTCTGTTTCTTTCCTTAGATGGCTGGGCAGGTTTTGGCTCTTGGATGTTGCGGCTGGGGTTTCTTTGAAGTGTATGCCCCTTTAGTTTTTGAGAGCCTCATATTTGTATGTCATGTATTAGGGTGGTTTTTAAGGGGTTTTTGTTCGAGCTAGGTGATTGATTGGCAACCGATTTCCCCTTGTTTGTATTTTTTTCCCACCCGAGCTTATTAGTGCACCTCGCACGGGCTCGTCGGTTAATAATATTTTGCCGTTCAAAAAAAAAAAAAACTTGAGTGTTGTGAGTTTGTTCGCAGATTCACCCTTTACGTTTTTAGCGATGTTTGTATCTGATGTACTCTATCAATGTGAATGAATGAATATCGTTTGTTTTTGTCAAAAATAAACATAGCTACCGGGCTGTACGTCTGTTTTTCTCTCTATTTATATGCTCCAGTTTCACGTTGAAATTCACAAATTGCCTTCTCCTTAGTTCTTATTGCATCTAACACAGCTTCTGGAAACCCACTTAATTCACAGAATATTGTCTTGAGTTTTGGTGTTCTATCATGGCTCTAGCAAACACGTTGTCATTCCCTGTCCTTTTGAGCCAAACTGCAAAACAATATGATCTGAAACGATCAACTCCTCTTGGTGGTTCTAACTATCAATGGGGTGCTTCAGATCTTACTTGCAATCCCAGACTCAACCAGGTTAGGTTTTTTTGTTGAAGTTATTTTATATCATTATATTTAAACCAACTTGTTTGGTTTTTTTTTTTTTTTTTGAAGTTATTTTCTATCATTATATTTAAATTAAACCAACTTGTTTGTTTGGTTTTTTTTTTTTTTGAAGTTATTTTCCATCATTAAAATTGAGATGGGACTCGTATTCTGAAATAAATGCACGTCTAATTATGAATGTATGTAGGTAAGGAGAAAACCATATGGGGTTTGTGCATCAGTATCCGAAATGGGGGAGGAGTATAAGAAGAAACCTACACCCCTTTTGGATACGGTAAAGTATCCCGAAGATATGAAGACTCTAACGATTAAGGTAAAATAGGAGTAACTCAGCATGAAAGTAAACTCTAACATATTTTAACATAAGAATTTCACTATAAACTGGTTAATGGTTAATGAACATGTAATGAATATGGCAGGTGTCATGTTTTTTTTTTCCTTTCAAGTGTTCAAATATACATTATATATTTTTTTAAAGGAAAATATACATTATATTTATTAAATGTCAATATTGTGCTCAAATACTAGGGGTGACATTTGCATCCAATATTATACTCAATTTTGTTTGGAGTACCGTAGAAATTGCCTATTTTTTTAACAAAAAAATGTGTAAAAACATGGCATGATAAACTAAGATATCCCATATTATGATGGTACCCCTTATGAGCCAATTATGAATTTTTAACTACAAACTCGTACATACATCATGTAATAAAATTGTTAATGGATTGGATTCAAAGTAATTATATGAGAATTTGATTCTATATCATTTATTGATGTAGGAACTAAAACAACTTGCGGGTGAACTACGCTCAGATCTTATCCAGAGTGTTTCTCAAACTGGAGGACATCTAGGATCGAATCTGGGAGTTGTAGAACTCACTGTTGCCCTCCATTATGTTTTCAATGCTCCTATAGACAAAATCTTGTGGGATGTTGGCCATCAGGTTGATTATACTCCTATTATTGTTATTATTATTAACATTTTGAAAAAATCTATGTTATTGGTAATTAGTACTAGTTGATTTTCTAGGTGATGATGACTCTCTTGTGTGAATTTTGCAGGCATATCCACATAAAATTCTCACTGGTAGAAGGAATAAGATGCATACATTGAGGCAGAAAGATGGATTAAGTGGGTTTACAAAACGCTCTGAGAGTGAATTTGATAGTTTTGGCACTGGTCACAGCTCAACAACAATGTCAGCAGGGCTAGGTATTTCTTTTATTCTTATCTATGTTTCTAGCCAGAAATTTTCAGGCCATAGCTTATATAAATAAAATAACTAGTTTGTAAAGTATTTCATGAAGAATGAATTTTGAAGATAATATGAGATGTACTCTTCTAAGTTTTAAGTTATATATATATATATATATATATATATATATATATATTACTGACTATTGTCATTGTCAAAAAAAGAAAGTTATATATTACACTTCAATTTGAAGGTATAACTGTGTAGATAACTTTTAAAGCCCAAGACAAAATATTTAGAGACACTTAATTAATAAGTGTTTATTATTTACCAATAGGAAATATCTTTTCAGTATTTCTGATTTTATTTTTCTTTTGGTAGTAGAAAAGACAGAAGCCCAAGTATTCTAATTTTTATGTAACCAAAAAAATATTTGACTATATTTGAAAAACAATCAGTTGATTCTAATTTTTCAAAAAACAACCTCTCTCACGAAAGCTTAAATTGTTAGGTCTAATAATGAACTTATATCTATGAGACAATATTTGCTGCAATTGCAGCACAGCTTTATATTAATGCACAATTGGATTTGTGATCGGACTTTTGAAATTTTGACATTTTACTCCAAAAACAGGAATGGCGGTGGGTAGAGATCTAAAGGGGGACAACAATAATGTGGTCACCATCATCGGTGATGGTGCTATGACTGCAGGGCAGGCATTTGAGGCAATGAATAATGCCGGATATCTTCAGTCAAATCTCATTGTTATTTTAAATGACAATGAACAAGTATCGCTACCTACCGCGGACCTTCATGGTCCAATACCACCAGTTGGTGCTCTGAGTAGATGTCTCAGCAGGTTACAATCAGACAAACCTCTTGTCAAGGTAAGTATGTTGGCTATCATGGCTATCCTTGTCGAAATCACACTGAGCTACCGTAATTTTGCAAAAGCTATATTCCATAAATGAATTTCTTCGATGTAAAATTTACTGTTTGGATGATAAATTTGGAGAATATTTAAAATGAAGAGATTTTATGAAGTTTTTTGTCAAAGATAAAGTTGGTCCTTATTATAGTTTCAAATTATGCAAATTGATTCTTATATGTTTTAAAACATACACATTGGTTACTATTTATTTTTAAATTTTGCAAACTGATCCCTAATATTTTTAGAAATTGCAAATGTTTCCCTATTTTTAATATTTTGAAAATTGGTCCATCAACTTTTTAAAATTTCAAATTTGGCCCAAATATTTAAAAATTCTCATTTTGCATCACTTTTCATTATATATTTATACCTTTATCCCATAACTTTTACACTTTATAAAAATAGCCGAGCAAAGTTTAAGAATGAAGAATTTTATTATTCTATCTAAACAAAAAAAAAAAAAATTAAAGAAATTCAATCAAAGCATTTGAATGGCCTAAAATTCTAATTTTCCTAAAATTTTCAATTACCTCATTCAAGTACACTCGGAAAGACTTACACAGCTGTGAATATTGCTAAGGTTGATGGATGTGATCATGGCATGATTGGTGGTTCTGGATCAACACTATTTGAAGAACTTGGACTTGACTACATTGGTCCTGTTGATGGTCATAGCATTGATGATCTTGTTGCCATTCTCAAACAAGTTAAGAGTCCTAAGAAAACTGGTCCTGTACTAATCCATGTTGTCACTGAAAAAGGCATAGGATATTCATATGCAGAAAAAGCAGCAGACAAGTACCATGGTACAACAGGCATTACAATTTTATTTTTGTCATTCATCAACATGATTCACCTAATAAATTCACCACTTATTATTGCTCATTCAATCTTAGAAAACACAGTTTCTATAGAGATCATGATTAATCTTTGACTTTCTACTTTCATGACAGGCATCTAACATGGTTTAGTTTTGCAGGAGTTGCTAAGTTTGATCCTGCAACTGGAAAACAGTTCAAGACCAAGGCTCCCACACCGGTACTCACATCATGCTTTGCGGATGCTTTGATTGCTGAAGCAGAAGCCGACAAAAGCATTGTTGGAATACATGCTGCAATGGGAGGTGGAACCGGCATGAATCACTTCCTTCACCGATTCCCTTCGAGATGTTTCGATGTAGGGATAGCAGAACAACACGCTGTTACATTTGCCGCAGGTCTAGCTTGTGAAGGTCTTAAGCCTTTTTGTGCAATTTACTCGTCCTTCTTGCAGAGAGCTTATGACCAGGTAGTGTAATTTAATACTATGTATAATATATAAGGCAATAGATTTGTATAATTTTTTTTTGAAAAGGAAAATATTATTCATGACAAGTATATGCAAGACGCACAAAGAACTCGTGGTAGGGAAGAAAAAAATACAACAAGGTGCCGCATATATACGGAACACCACCACACCAAAAAACAACCCAAAACCAATAAAGGCCTCGAACAACGAGGCTGGAATATACTTGTAATACACCAAGCATACCACCGCCTCAAAACCGAAAAACCCAAAAACAGGCTGCTGCACAGCCAAAACAACAGAAGCAGCACGCAAGGCCAGGCAGAAATAGACCGAAACAGCAACACAACCTAACAGCACAGTGGCAAGCAGCCCAAACAGAACTGAAAGACACTCCCCCGAAAGATATGTATAATTAAAGCTCATTTCTTTTCACGTGGGATCATACTACCACTAATGCACCCGATCCCATATAGCATATTGTACAACATTAATTTTTTTACATAACGCTTTAAACATATATTTCATGTCCATTCGAAGGTGGTGCATGATGTGGATTTGCAAAAGCTGCCAGTAAGATTTGTTATCGACAAAGCTGGATTTGTTGGAGAAGATGGTCCAACACATTGTGGTTCTTTTGATGTCACTTATATGGCATGTCTACCTAATATGGTGGTGATGGCTCCTTCTGACGAAGCAGAGATTATGCATATGGTGGCTACTGCTGTTGCCATTAACGATCGACCTAGCTGTTTCCGATTTCCACGGGCAAATGGAACTGGTGTAGAATTGCCACCAGGGAATAGAGGCATTCCTCTTGAGGTGAGTTAGAGTATAGTCACACTTGTACTTCAAAATTATGCCCTTATGAAGATTATTAGAAAGAACAGAAAGAACTGTTCACAACATATTCTCTAACACGTCCATTTCTGCACGAATACTTTATCCATTATTAGAATAAATTCACTTGGATCCCACTAAATAATTGCATTAGATTGTGTATTGCTGGCATTTCTCTTTAAAACAGTTTTGGCAAATGAAGTTAACAATTAATGTTTTGACATGTTAACAGATAGGAAAAGGAAGAATGCTCACCGAAGGCGAAAGAGTGGCCCTTTTGGGCTTTGGGACAGCAGTTAAAAGTTGTCTCGATGCAGCCTCAATATTGCAGCAACATGGCTTGCTTGTCACGGTGGCGGATGCACGTTTCTGCAAGCCATTGGACCGTTCGCTCATTCGCAACCTAGCGAAATCACATGAGGTTTTGATCACTGTGGAAGAAGGATCAATAGGAGGATTTGGTTCTCATGTTGCTCAGTTCATGGCCCTTGATGGTCTTCTTGATGGAAAATTGAAGGTATGAATTATTTTCTTATGTACTAAAATAATAGTACGTAGAATTTAATTTTGATAGACCGTCAATGTAAAAAGTTCAACACTATCAATAAGTTATACCCAATCATTTGTGCGACTTTAGAAATATTTATGATCAAAGTTGAACGTTGTTAATAATATGATGATTATAACTGATTGACGTTGTAATTTTTTTTCCTCATTGACGGCGGTGACACTGTTTATGAATTAAATTCATCATAGTATAATATATAACATATAACATGCATTTTTGAAGTTTGTGTGAACATTTAACTAGTTGCTGAAAATTGAATTGTGTTTCATATTATCCAGTGGAGGCCAATGGTGTTTCCAGATATTTATATCGACCATGGATCACCAGCTGAGCAATTAGCTGTTGCTGGTCTCACTTCACCTCAAATAGCAGCAACAGTTTTCAAAATTCTTGGACAAAGAAAGGAGGCACTAGAGGTCATACACTAA
Protein sequence

>MS.gene62710.t1

MVHRPFVRAVLFGGCCEPAVWCGCPFGLCACFAGKGGAFCATAVAEYCLEFWCSIMALANTLSFPVLLSQTAKQYDLKRSTPLGGSNYQWGASDLTCNPRLNQVRRKPYGVCASVSEMGEEYKKKPTPLLDTVKYPEDMKTLTIKELKQLAGELRSDLIQSVSQTGGHLGSNLGVVELTVALHYVFNAPIDKILWDVGHQAYPHKILTGRRNKMHTLRQKDGLSGFTKRSESEFDSFGTGHSSTTMSAGLGMAVGRDLKGDNNNVVTIIGDGAMTAGQAFEAMNNAGYLQSNLIVILNDNEQVSLPTADLHGPIPPVGALSRCLSRLQSDKPLVKTYTAVNIAKVDGCDHGMIGGSGSTLFEELGLDYIGPVDGHSIDDLVAILKQVKSPKKTGPVLIHVVTEKGIGYSYAEKAADKYHGVAKFDPATGKQFKTKAPTPVLTSCFADALIAEAEADKSIVGIHAAMGGGTGMNHFLHRFPSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFVIDKAGFVGEDGPTHCGSFDVTYMACLPNMVVMAPSDEAEIMHMVATAVAINDRPSCFRFPRANGTGVELPPGNRGIPLEIGKGRMLTEGERVALLGFGTAVKSCLDAASILQQHGLLVTVADARFCKPLDRSLIRNLAKSHEVLITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPMVFPDIYIDHGSPAEQLAVAGLTSPQIAATVFKILGQRKEALEVIH