Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62753.t1 | RHN38559.1 | 78.8 | 646 | 18 | 1 | 1 | 527 | 32 | 677 | 4.00E-286 | 993.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62753.t1 | Q9FIF8 | 43.9 | 649 | 230 | 9 | 4 | 527 | 28 | 667 | 7.1e-135 | 482.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62753.t1 | A0A396G9P4 | 78.8 | 646 | 18 | 1 | 1 | 527 | 32 | 677 | 2.9e-286 | 993.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052469 | MS.gene62753 | 0.801311 | 9.56E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene62753 | 0.813955 | 1.97E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene62753 | 0.814222 | 1.72E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAATTAAATATATTAG+TGG | - | 56609:9212-9231 | MS.gene62753:CDS | 10.0% |
| !!! | AAAATGTGATTTTATTTTAT+AGG | - | 56609:7612-7631 | MS.gene62753:intron | 10.0% |
| !!! | AAATGTGATTTTATTTTATA+GGG | - | 56609:7613-7632 | MS.gene62753:intron | 10.0% |
| !! | ACATCTCTATATTTATAAAT+GGG | - | 56609:7359-7378 | MS.gene62753:intron | 15.0% |
| !! | TAATAAATCTTCATAAAAGA+GGG | + | 56609:6840-6859 | None:intergenic | 15.0% |
| !! | TAATTAACCCTAATTATTAT+AGG | - | 56609:7677-7696 | MS.gene62753:CDS | 15.0% |
| !! | TCAATATCCTATAATAATTA+GGG | + | 56609:7687-7706 | None:intergenic | 15.0% |
| !! | TTAATAAATCTTCATAAAAG+AGG | + | 56609:6841-6860 | None:intergenic | 15.0% |
| !!! | ACAAAATTTTGAATATTTAC+AGG | - | 56609:7643-7662 | MS.gene62753:intron | 15.0% |
| !!! | CAAAATTTTGAATATTTACA+GGG | - | 56609:7644-7663 | MS.gene62753:intron | 15.0% |
| !!! | TAGTTTTTAGATGATAATTT+TGG | + | 56609:6538-6557 | None:intergenic | 15.0% |
| !! | ACAAAACTGTGAATATTTAT+AGG | + | 56609:7423-7442 | None:intergenic | 20.0% |
| !! | ACTGATGGAAAAAATTTATA+GGG | - | 56609:7551-7570 | MS.gene62753:intron | 20.0% |
| !! | ATAGTTTATATCTTTCACAA+AGG | + | 56609:9273-9292 | None:intergenic | 20.0% |
| !! | ATTAAAACACTCAACATATA+TGG | + | 56609:7806-7825 | None:intergenic | 20.0% |
| !! | ATTAGGGTTAATTAAGTAAA+TGG | + | 56609:7671-7690 | None:intergenic | 20.0% |
| !! | ATTATCATCTAAAAACTACA+AGG | - | 56609:6540-6559 | MS.gene62753:CDS | 20.0% |
| !! | CAAAACTGTGAATATTTATA+GGG | + | 56609:7422-7441 | None:intergenic | 20.0% |
| !! | CACATCTCTATATTTATAAA+TGG | - | 56609:7358-7377 | MS.gene62753:intron | 20.0% |
| !! | CATCTCTATATTTATAAATG+GGG | - | 56609:7360-7379 | MS.gene62753:intron | 20.0% |
| !! | GTCAATATCCTATAATAATT+AGG | + | 56609:7688-7707 | None:intergenic | 20.0% |
| !! | TAATGGTACTTATAATGATT+TGG | - | 56609:9067-9086 | MS.gene62753:CDS | 20.0% |
| !! | TACGATAAAAATGATAAGAT+TGG | + | 56609:7710-7729 | None:intergenic | 20.0% |
| !! | TACTGATGGAAAAAATTTAT+AGG | - | 56609:7550-7569 | MS.gene62753:intron | 20.0% |
| !!! | AATCTTATCATTTTTATCGT+AGG | - | 56609:7709-7728 | MS.gene62753:CDS | 20.0% |
| !!! | AATGTGTGATTTTATTTTGT+AGG | + | 56609:7454-7473 | None:intergenic | 20.0% |
| !!! | ATAAATGTTAGTTTTAGTCA+TGG | - | 56609:6686-6705 | MS.gene62753:CDS | 20.0% |
| !!! | ATGTGTGATTTTATTTTGTA+GGG | + | 56609:7453-7472 | None:intergenic | 20.0% |
| !!! | TATATGTTGAGTGTTTTAAT+TGG | - | 56609:7806-7825 | MS.gene62753:CDS | 20.0% |
| !!! | TTCATAATTTCTAGAATCAA+CGG | + | 56609:8822-8841 | None:intergenic | 20.0% |
| !!! | TTTTAGAATGTGTAACATTA+AGG | + | 56609:8623-8642 | None:intergenic | 20.0% |
| ! | AAAACTTACATAGTGTACAT+GGG | - | 56609:6314-6333 | MS.gene62753:CDS | 25.0% |
| ! | ATAGAGACTAAAAATACTGA+TGG | - | 56609:7536-7555 | MS.gene62753:intron | 25.0% |
| ! | TAAAACTTACATAGTGTACA+TGG | - | 56609:6313-6332 | MS.gene62753:CDS | 25.0% |
| ! | TCATTATAAGTACCATTAAC+CGG | + | 56609:9065-9084 | None:intergenic | 25.0% |
| ! | TCTATATTTATAAATGGGGT+TGG | - | 56609:7364-7383 | MS.gene62753:intron | 25.0% |
| ! | TGATATAAATGACAAAAGAC+AGG | - | 56609:8908-8927 | MS.gene62753:intron | 25.0% |
| ! | TTAGAAATTCTACAGCAATT+TGG | + | 56609:8209-8228 | None:intergenic | 25.0% |
| !! | AAATTTTTATGAGACTCAAC+AGG | + | 56609:9311-9330 | None:intergenic | 25.0% |
| !! | ATGCAGATGGAAAATTTTAT+AGG | - | 56609:7583-7602 | MS.gene62753:intron | 25.0% |
| !! | CATTTTCCTTAAGCATTTTA+AGG | - | 56609:7487-7506 | MS.gene62753:intron | 25.0% |
| !! | GGATAATATGATGTTCTTTT+AGG | + | 56609:6347-6366 | None:intergenic | 25.0% |
| !! | TGCAGATGGAAAATTTTATA+GGG | - | 56609:7584-7603 | MS.gene62753:intron | 25.0% |
| !! | TTGTCATTTATATCATCTGA+GGG | + | 56609:8903-8922 | None:intergenic | 25.0% |
| !! | TTTGTCATTTATATCATCTG+AGG | + | 56609:8904-8923 | None:intergenic | 25.0% |
| !! | TTTTGTCCTTAAAATGCTTA+AGG | + | 56609:7496-7515 | None:intergenic | 25.0% |
| !!! | TTTATTTTCTATGATCGATC+AGG | - | 56609:7838-7857 | MS.gene62753:intron | 25.0% |
| ACTTGCAACAAGAAGATTAT+TGG | - | 56609:7916-7935 | MS.gene62753:intron | 30.0% | |
| ACTTGTTTATGACATCACTA+AGG | - | 56609:9148-9167 | MS.gene62753:CDS | 30.0% | |
| ATAAATATAGAGATGTGTGC+TGG | + | 56609:7355-7374 | None:intergenic | 30.0% | |
| ATAGACAAGAATATGGTGAA+CGG | - | 56609:8528-8547 | MS.gene62753:intron | 30.0% | |
| ATCAATGAATTGACGATCTA+CGG | + | 56609:8367-8386 | None:intergenic | 30.0% | |
| ATCTTTCACAAAGGATCTAT+TGG | + | 56609:9264-9283 | None:intergenic | 30.0% | |
| ATGTTGCAACAAATCATTGA+TGG | - | 56609:6386-6405 | MS.gene62753:CDS | 30.0% | |
| ATTAATATTGTCCCCTCAAA+TGG | - | 56609:8429-8448 | MS.gene62753:intron | 30.0% | |
| CATACTTAATGACCAACAAA+GGG | - | 56609:6469-6488 | MS.gene62753:CDS | 30.0% | |
| CATAGAACAGTTACAAATGT+TGG | - | 56609:9344-9363 | MS.gene62753:CDS | 30.0% | |
| GACATTATCACAATCTCAAT+TGG | - | 56609:8180-8199 | MS.gene62753:intron | 30.0% | |
| TCACTAAGGAAGATTATGTT+CGG | - | 56609:9162-9181 | MS.gene62753:CDS | 30.0% | |
| TCTTCAAAATTTCAGCTACA+GGG | + | 56609:8737-8756 | None:intergenic | 30.0% | |
| TGAAATCATTTCATCCAGAT+TGG | - | 56609:8997-9016 | MS.gene62753:intron | 30.0% | |
| TGAGTGTATAGACAAGAATA+TGG | - | 56609:8521-8540 | MS.gene62753:intron | 30.0% | |
| TTAAGGACAAAAAACGTTGA+TGG | - | 56609:7504-7523 | MS.gene62753:intron | 30.0% | |
| TTCAAAGATTGCTGTATACA+GGG | - | 56609:8083-8102 | MS.gene62753:intron | 30.0% | |
| TTCATTGATAAGCTCATTCT+TGG | - | 56609:8378-8397 | MS.gene62753:intron | 30.0% | |
| TTTGTATCCAAGTTAAGTGT+AGG | + | 56609:8672-8691 | None:intergenic | 30.0% | |
| ! | AGCTTTTATGATCTTGCAAA+AGG | - | 56609:8036-8055 | MS.gene62753:intron | 30.0% |
| ! | GGAAATGGAAAGACTTTTAT+TGG | - | 56609:8399-8418 | MS.gene62753:intron | 30.0% |
| ! | TACACTTAACTTGGATACAA+AGG | - | 56609:8671-8690 | MS.gene62753:intron | 30.0% |
| ! | TATACAGCAATCTTTGAAGA+CGG | + | 56609:8081-8100 | None:intergenic | 30.0% |
| ! | TCTGAAAGTTTTACGGATAA+AGG | - | 56609:6662-6681 | MS.gene62753:CDS | 30.0% |
| !! | ATTTCTAGAATCAACGGATT+TGG | + | 56609:8816-8835 | None:intergenic | 30.0% |
| !! | TGATCTCTTTTGATTGATTG+AGG | + | 56609:6587-6606 | None:intergenic | 30.0% |
| !! | TTTCTAGAATCAACGGATTT+GGG | + | 56609:8815-8834 | None:intergenic | 30.0% |
| ACAAGAAGATTATTGGAGCA+AGG | - | 56609:7923-7942 | MS.gene62753:intron | 35.0% | |
| AGAGATCAATTCATTGAGAG+TGG | - | 56609:6599-6618 | MS.gene62753:CDS | 35.0% | |
| AGATATAAACTATCCAGCAC+TGG | - | 56609:9280-9299 | MS.gene62753:CDS | 35.0% | |
| AGGGACTAAAAAAATGCAGA+TGG | - | 56609:7570-7589 | MS.gene62753:intron | 35.0% | |
| ATCTAAAAACTACAAGGTCG+TGG | - | 56609:6546-6565 | MS.gene62753:CDS | 35.0% | |
| ATGCTTAAGGAAAATGACAC+AGG | + | 56609:7483-7502 | None:intergenic | 35.0% | |
| CAACAAAGGGAAAAGCTTAT+TGG | - | 56609:6482-6501 | MS.gene62753:CDS | 35.0% | |
| CATGGAAAAGGAAATACTCA+CGG | - | 56609:8260-8279 | MS.gene62753:intron | 35.0% | |
| CCATACTTAATGACCAACAA+AGG | - | 56609:6468-6487 | MS.gene62753:CDS | 35.0% | |
| CCTTTGTTGGTCATTAAGTA+TGG | + | 56609:6471-6490 | None:intergenic | 35.0% | |
| CTAAAAGATCCTATTGCCAT+TGG | - | 56609:8225-8244 | MS.gene62753:intron | 35.0% | |
| CTAGAAACACTACTTGGTTT+AGG | + | 56609:8309-8328 | None:intergenic | 35.0% | |
| CTCTTCAAAATTTCAGCTAC+AGG | + | 56609:8738-8757 | None:intergenic | 35.0% | |
| CTTCAAAGATTGCTGTATAC+AGG | - | 56609:8082-8101 | MS.gene62753:intron | 35.0% | |
| GATAAGCTCATTCTTGGAAA+TGG | - | 56609:8384-8403 | MS.gene62753:intron | 35.0% | |
| GCAGCAATACTAAATAACCA+AGG | + | 56609:8339-8358 | None:intergenic | 35.0% | |
| GTCAAATACAGCATAGAATC+TGG | - | 56609:8930-8949 | MS.gene62753:intron | 35.0% | |
| GTTCGGATGCTTTGTAATTA+TGG | - | 56609:9179-9198 | MS.gene62753:CDS | 35.0% | |
| TCAATTCATTGAGAGTGGTT+TGG | - | 56609:6604-6623 | MS.gene62753:CDS | 35.0% | |
| TCATTTATATCATCTGAGGG+TGG | + | 56609:8900-8919 | None:intergenic | 35.0% | |
| TCCGTAAAACTTTCAGATTC+TGG | + | 56609:6659-6678 | None:intergenic | 35.0% | |
| TCTAAAAACTACAAGGTCGT+GGG | - | 56609:6547-6566 | MS.gene62753:CDS | 35.0% | |
| TCTATACACTCACACATTTC+AGG | + | 56609:8513-8532 | None:intergenic | 35.0% | |
| TGAAAAGAACCAATGGCAAT+AGG | + | 56609:8237-8256 | None:intergenic | 35.0% | |
| TGATGTCATAAACAAGTCCA+GGG | + | 56609:9145-9164 | None:intergenic | 35.0% | |
| TGATTGATTGAGGAAATCCA+AGG | + | 56609:6577-6596 | None:intergenic | 35.0% | |
| TGCTTAAGGAAAATGACACA+GGG | + | 56609:7482-7501 | None:intergenic | 35.0% | |
| ! | ATACAGCAATCTTTGAAGAC+GGG | + | 56609:8080-8099 | None:intergenic | 35.0% |
| ! | CAATAAGCTTTTCCCTTTGT+TGG | + | 56609:6484-6503 | None:intergenic | 35.0% |
| ! | GCCAGAATCTGAAAGTTTTA+CGG | - | 56609:6655-6674 | MS.gene62753:CDS | 35.0% |
| ! | GGTACTTATAATGATTTGGC+AGG | - | 56609:9071-9090 | MS.gene62753:CDS | 35.0% |
| ! | TCTAAAGCCTACACTTAACT+TGG | - | 56609:8662-8681 | MS.gene62753:intron | 35.0% |
| ! | TTCTAAAAATGATGCTCCTC+AGG | - | 56609:8635-8654 | MS.gene62753:intron | 35.0% |
| ! | TTCTTTTCATGCCATGGAAA+AGG | - | 56609:8248-8267 | MS.gene62753:intron | 35.0% |
| !! | GGGGTTGGTCATAATTATTA+GGG | - | 56609:7379-7398 | MS.gene62753:intron | 35.0% |
| !! | TGGGGTTGGTCATAATTATT+AGG | - | 56609:7378-7397 | MS.gene62753:intron | 35.0% |
| AATGTCAACTCCATCAGCAA+TGG | + | 56609:8166-8185 | None:intergenic | 40.0% | |
| AGATGGTAACTGCAATGGAA+AGG | - | 56609:8116-8135 | MS.gene62753:intron | 40.0% | |
| ATGGCAGATTTGATAGATGC+TGG | + | 56609:9026-9045 | None:intergenic | 40.0% | |
| ATGTGTGATAAGGAGGTCAA+TGG | + | 56609:7306-7325 | None:intergenic | 40.0% | |
| ATTATTGGAGCAAGGTCGTA+CGG | - | 56609:7931-7950 | MS.gene62753:intron | 40.0% | |
| CATGGCATGAAAAGAACCAA+TGG | + | 56609:8244-8263 | None:intergenic | 40.0% | |
| GAAAAGCTTATTGGCATGAG+AGG | - | 56609:6491-6510 | MS.gene62753:CDS | 40.0% | |
| GAAGAGAAAGAAGCAACTGT+AGG | + | 56609:8786-8805 | None:intergenic | 40.0% | |
| GACAAAGATGGTAACTGCAA+TGG | - | 56609:8111-8130 | MS.gene62753:intron | 40.0% | |
| GTGATGTCATAAACAAGTCC+AGG | + | 56609:9146-9165 | None:intergenic | 40.0% | |
| ! | ATTCATTGAGAGTGGTTTGG+TGG | - | 56609:6607-6626 | MS.gene62753:CDS | 40.0% |
| ! | CATAGAATCTGGAACCTCTA+TGG | - | 56609:8941-8960 | MS.gene62753:intron | 40.0% |
| ! | CGTGAGTATTTCCTTTTCCA+TGG | + | 56609:8262-8281 | None:intergenic | 40.0% |
| ! | GTGAGTTTGCTTATGGATCT+GGG | - | 56609:9093-9112 | MS.gene62753:CDS | 40.0% |
| !! | GAAGTATTGGCTTATGCGAA+TGG | - | 56609:8582-8601 | MS.gene62753:intron | 40.0% |
| !! | TTCAGCTACAGGGTATTTTG+TGG | + | 56609:8727-8746 | None:intergenic | 40.0% |
| !! | TTGTTTTGTGTGGAACACCA+GGG | - | 56609:8556-8575 | MS.gene62753:intron | 40.0% |
| !! | TTTGATGATGCCATTGCTGA+TGG | - | 56609:8153-8172 | MS.gene62753:intron | 40.0% |
| !!! | AACGGTAAGCTTGTTTTGTG+TGG | - | 56609:8546-8565 | MS.gene62753:intron | 40.0% |
| !!! | CATTGGTTCTTTTCATGCCA+TGG | - | 56609:8242-8261 | MS.gene62753:intron | 40.0% |
| !!! | GGAATTTTGTGCCATTTGAG+GGG | + | 56609:8443-8462 | None:intergenic | 40.0% |
| !!! | GGGAATTTTGTGCCATTTGA+GGG | + | 56609:8444-8463 | None:intergenic | 40.0% |
| !!! | TGGGAATTTTGTGCCATTTG+AGG | + | 56609:8445-8464 | None:intergenic | 40.0% |
| AAACCAGATATAAGTGCCCC+AGG | - | 56609:8840-8859 | MS.gene62753:intron | 45.0% | |
| AAAGGAAATACTCACGGTGC+AGG | - | 56609:8266-8285 | MS.gene62753:intron | 45.0% | |
| AATGTGAGGACATGCCATAG+AGG | + | 56609:8958-8977 | None:intergenic | 45.0% | |
| AGAGGTGGAGATGTGTGATA+AGG | + | 56609:7316-7335 | None:intergenic | 45.0% | |
| AGGATCTATTGGAAGCTCCA+TGG | + | 56609:9253-9272 | None:intergenic | 45.0% | |
| AGTAGCAGTGTAGCTTGAGT+TGG | + | 56609:9375-9394 | None:intergenic | 45.0% | |
| AGTTACAGCAGGAGCTTCAA+CGG | - | 56609:6437-6456 | MS.gene62753:CDS | 45.0% | |
| ATGCTGAGATGATGAGAGGT+TGG | + | 56609:6368-6387 | None:intergenic | 45.0% | |
| CAAATCTGCCATCATGACCA+CGG | - | 56609:9034-9053 | MS.gene62753:CDS | 45.0% | |
| CAACATGCTGAGATGATGAG+AGG | + | 56609:6372-6391 | None:intergenic | 45.0% | |
| CAGGTGATCCATATCCTCTT+GGG | + | 56609:8494-8513 | None:intergenic | 45.0% | |
| GAGCATTACGGACAGCTATT+GGG | + | 56609:8464-8483 | None:intergenic | 45.0% | |
| GATCAGAGTGCAAGAGACTA+TGG | - | 56609:7958-7977 | MS.gene62753:intron | 45.0% | |
| GCTACGCTAGAAACACTACT+TGG | + | 56609:8315-8334 | None:intergenic | 45.0% | |
| GCTTAGTTCGAAGTTACAGC+AGG | - | 56609:6426-6445 | MS.gene62753:CDS | 45.0% | |
| GCTTATGCGAATGGTGCAAT+TGG | - | 56609:8591-8610 | MS.gene62753:intron | 45.0% | |
| GTAGCAGTGTAGCTTGAGTT+GGG | + | 56609:9374-9393 | None:intergenic | 45.0% | |
| GTTGCTTCTTTCTCTTCTCG+TGG | - | 56609:8789-8808 | MS.gene62753:intron | 45.0% | |
| TACAGGGTATGCGACAAAGA+TGG | - | 56609:8099-8118 | MS.gene62753:intron | 45.0% | |
| TCAGGTGATCCATATCCTCT+TGG | + | 56609:8495-8514 | None:intergenic | 45.0% | |
| TCCCATTCCGAAAAAGTGGA+GGG | - | 56609:7867-7886 | MS.gene62753:intron | 45.0% | |
| TGAGCATTACGGACAGCTAT+TGG | + | 56609:8465-8484 | None:intergenic | 45.0% | |
| TTCTATGATCGATCAGGCCT+TGG | - | 56609:7844-7863 | MS.gene62753:intron | 45.0% | |
| TTGGGCAAGCTTGAGCATTA+CGG | + | 56609:8476-8495 | None:intergenic | 45.0% | |
| TTGGTCCCATTCCGAAAAAG+TGG | - | 56609:7863-7882 | MS.gene62753:intron | 45.0% | |
| ! | GGAGAAAACTCAAGTTGCCA+TGG | - | 56609:9233-9252 | MS.gene62753:CDS | 45.0% |
| ! | GGTGAGTTTGCTTATGGATC+TGG | - | 56609:9092-9111 | MS.gene62753:CDS | 45.0% |
| ! | TGTTTTGTGTGGAACACCAG+GGG | - | 56609:8557-8576 | MS.gene62753:intron | 45.0% |
| ! | TTGGCAGGTGAGTTTGCTTA+TGG | - | 56609:9086-9105 | MS.gene62753:CDS | 45.0% |
| ! | TTGGTGGTTGGAGTCATAGA+TGG | - | 56609:6623-6642 | MS.gene62753:CDS | 45.0% |
| !! | AGAGATGTGTGCTGGTTTGA+TGG | + | 56609:7347-7366 | None:intergenic | 45.0% |
| !! | ATTGAGAGTGGTTTGGTGGT+TGG | - | 56609:6611-6630 | MS.gene62753:CDS | 45.0% |
| !! | CTGTAGGAGCATTGTTGTCA+TGG | + | 56609:8770-8789 | None:intergenic | 45.0% |
| !! | GAGTCATAGATGGCGGAATA+TGG | - | 56609:6633-6652 | MS.gene62753:CDS | 45.0% |
| !!! | ACTTTTTCGGAATGGGACCA+AGG | + | 56609:7864-7883 | None:intergenic | 45.0% |
| !!! | CAAACTCCCCTCCACTTTTT+CGG | + | 56609:7877-7896 | None:intergenic | 45.0% |
| !!! | CTTGTTTTGTGTGGAACACC+AGG | - | 56609:8555-8574 | MS.gene62753:intron | 45.0% |
| AACACCAGGGGGTGAAGTAT+TGG | - | 56609:8569-8588 | MS.gene62753:intron | 50.0% | |
| AATGCTCAAGCTTGCCCAAG+AGG | - | 56609:8477-8496 | MS.gene62753:intron | 50.0% | |
| ACCACGGCAAAACCGGTTAA+TGG | - | 56609:9050-9069 | MS.gene62753:CDS | 50.0% | |
| AGATATAAGTGCCCCAGGAG+TGG | - | 56609:8845-8864 | MS.gene62753:intron | 50.0% | |
| ATAGATGCTGGCGACCAATC+TGG | + | 56609:9014-9033 | None:intergenic | 50.0% | |
| ATCAACGGCAAGTGGAAGAG+AGG | - | 56609:8002-8021 | MS.gene62753:intron | 50.0% | |
| ATGGCATGTCCTCACATTGC+TGG | - | 56609:8960-8979 | MS.gene62753:intron | 50.0% | |
| CAAGCTTGCCCAAGAGGATA+TGG | - | 56609:8483-8502 | MS.gene62753:intron | 50.0% | |
| CAGAGTGCAAGAGACTATGG+TGG | - | 56609:7961-7980 | MS.gene62753:intron | 50.0% | |
| CATCATGACCACGGCAAAAC+CGG | - | 56609:9043-9062 | MS.gene62753:CDS | 50.0% | |
| CCAAAACAAGCTGTTGACCC+TGG | - | 56609:9125-9144 | MS.gene62753:CDS | 50.0% | |
| CCCATTCCGAAAAAGTGGAG+GGG | - | 56609:7868-7887 | MS.gene62753:intron | 50.0% | |
| GCAAGAGACTATGGTGGTCA+TGG | - | 56609:7967-7986 | MS.gene62753:intron | 50.0% | |
| GCTTATTGGCATGAGAGGTG+TGG | - | 56609:6496-6515 | MS.gene62753:CDS | 50.0% | |
| GGTGGAGATGTGTGATAAGG+AGG | + | 56609:7313-7332 | None:intergenic | 50.0% | |
| GTCCCATTCCGAAAAAGTGG+AGG | - | 56609:7866-7885 | MS.gene62753:intron | 50.0% | |
| GTGGTTGGAGTCATAGATGG+CGG | - | 56609:6626-6645 | MS.gene62753:CDS | 50.0% | |
| TAAGCCAATACTTCACCCCC+TGG | + | 56609:8576-8595 | None:intergenic | 50.0% | |
| TCAACAGGAATCACCAGTGC+TGG | + | 56609:9296-9315 | None:intergenic | 50.0% | |
| TGGCGCTAGAGGTGAATATG+CGG | + | 56609:8880-8899 | None:intergenic | 50.0% | |
| ! | ACTCCTGGGGCACTTATATC+TGG | + | 56609:8846-8865 | None:intergenic | 50.0% |
| ! | GGTTTGATGGTTGAGGTGAG+AGG | + | 56609:7334-7353 | None:intergenic | 50.0% |
| ! | GTTTTGTGTGGAACACCAGG+GGG | - | 56609:8558-8577 | MS.gene62753:intron | 50.0% |
| ! | TTGATGGTTGAGGTGAGAGG+TGG | + | 56609:7331-7350 | None:intergenic | 50.0% |
| ! | TTTAGGACCGCTGTTTCCTG+CGG | + | 56609:8292-8311 | None:intergenic | 50.0% |
| !! | ACCATTAACCGGTTTTGCCG+TGG | + | 56609:9054-9073 | None:intergenic | 50.0% |
| !! | CCAGGGTCAACAGCTTGTTT+TGG | + | 56609:9128-9147 | None:intergenic | 50.0% |
| !! | GTAGGCTTTAGAGAGACCTG+AGG | + | 56609:8654-8673 | None:intergenic | 50.0% |
| !! | GTGTGCTGGTTTGATGGTTG+AGG | + | 56609:7341-7360 | None:intergenic | 50.0% |
| !! | GTGTTTCTAGCGTAGCACCT+TGG | - | 56609:8319-8338 | MS.gene62753:intron | 50.0% |
| !!! | CCCCTCCACTTTTTCGGAAT+GGG | + | 56609:7871-7890 | None:intergenic | 50.0% |
| !!! | TCCCCTCCACTTTTTCGGAA+TGG | + | 56609:7872-7891 | None:intergenic | 50.0% |
| AACGGCAAGTGGAAGAGAGG+TGG | - | 56609:8005-8024 | MS.gene62753:intron | 55.0% | |
| AAGTGGAGGGGAGTTTGTGC+AGG | - | 56609:7880-7899 | MS.gene62753:intron | 55.0% | |
| ACAAGGTCGTGGGACTTCCT+TGG | - | 56609:6557-6576 | MS.gene62753:CDS | 55.0% | |
| ACTTGCCGTTGATGCCGTGT+GGG | + | 56609:7995-8014 | None:intergenic | 55.0% | |
| ATTGGAGCAAGGTCGTACGG+CGG | - | 56609:7934-7953 | MS.gene62753:intron | 55.0% | |
| CGGCCAAGATATCCACTCCT+GGG | + | 56609:8860-8879 | None:intergenic | 55.0% | |
| GCAAGTGGAAGAGAGGTGGA+GGG | - | 56609:8009-8028 | MS.gene62753:intron | 55.0% | |
| GCAGCAACTCCAGCAATGTG+AGG | + | 56609:8972-8991 | None:intergenic | 55.0% | |
| GGCCAAGATATCCACTCCTG+GGG | + | 56609:8859-8878 | None:intergenic | 55.0% | |
| TGCCCCAGGAGTGGATATCT+TGG | - | 56609:8854-8873 | MS.gene62753:intron | 55.0% | |
| TGGAACCCACACGGCATCAA+CGG | - | 56609:7987-8006 | MS.gene62753:intron | 55.0% | |
| TGGTGGTCATGGAACCCACA+CGG | - | 56609:7978-7997 | MS.gene62753:intron | 55.0% | |
| ! | CGGTTTTGCCGTGGTCATGA+TGG | + | 56609:9045-9064 | None:intergenic | 55.0% |
| !! | CTTGCAAAAGGCACCGCAAG+AGG | - | 56609:8048-8067 | MS.gene62753:intron | 55.0% |
| AGACGGGACACCACCTCTTG+CGG | + | 56609:8064-8083 | None:intergenic | 60.0% | |
| CACACGGCATCAACGGCAAG+TGG | - | 56609:7994-8013 | MS.gene62753:intron | 60.0% | |
| CACTTGCCGTTGATGCCGTG+TGG | + | 56609:7996-8015 | None:intergenic | 60.0% | |
| GCGGCCAAGATATCCACTCC+TGG | + | 56609:8861-8880 | None:intergenic | 60.0% | |
| GGCAAGTGGAAGAGAGGTGG+AGG | - | 56609:8008-8027 | MS.gene62753:intron | 60.0% | |
| TCATCTGAGGGTGGCGCTAG+AGG | + | 56609:8891-8910 | None:intergenic | 60.0% | |
| TGGAGGGGAGTTTGTGCAGG+CGG | - | 56609:7883-7902 | MS.gene62753:intron | 60.0% | |
| !! | GCAAAAGGCACCGCAAGAGG+TGG | - | 56609:8051-8070 | MS.gene62753:intron | 60.0% |
| AGGGGAGTTTGTGCAGGCGG+TGG | - | 56609:7886-7905 | MS.gene62753:intron | 65.0% | |
| ATACTCACGGTGCAGGCCGC+AGG | - | 56609:8273-8292 | MS.gene62753:intron | 65.0% | |
| GTGCAGGCCGCAGGAAACAG+CGG | - | 56609:8282-8301 | MS.gene62753:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 56609 | gene | 6294 | 9415 | 6294 | ID=MS.gene62753 |
| 56609 | mRNA | 6294 | 9415 | 6294 | ID=MS.gene62753.t1;Parent=MS.gene62753 |
| 56609 | exon | 9026 | 9415 | 9026 | ID=MS.gene62753.t1.exon1;Parent=MS.gene62753.t1 |
| 56609 | CDS | 9026 | 9415 | 9026 | ID=cds.MS.gene62753.t1;Parent=MS.gene62753.t1 |
| 56609 | exon | 7677 | 7849 | 7677 | ID=MS.gene62753.t1.exon2;Parent=MS.gene62753.t1 |
| 56609 | CDS | 7677 | 7849 | 7677 | ID=cds.MS.gene62753.t1;Parent=MS.gene62753.t1 |
| 56609 | exon | 6294 | 7319 | 6294 | ID=MS.gene62753.t1.exon3;Parent=MS.gene62753.t1 |
| 56609 | CDS | 6294 | 7319 | 6294 | ID=cds.MS.gene62753.t1;Parent=MS.gene62753.t1 |
| Gene Sequence |
| Protein sequence |
