Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62849.t1 | XP_024638523.1 | 99 | 199 | 2 | 0 | 1 | 199 | 160 | 358 | 4.90E-104 | 387.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62849.t1 | Q8VYJ2 | 71.0 | 200 | 50 | 6 | 1 | 196 | 160 | 355 | 1.1e-67 | 257.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62849.t1 | G7JK75 | 99.0 | 199 | 2 | 0 | 1 | 199 | 134 | 332 | 3.5e-104 | 387.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058928 | MS.gene62849 | -0.80034 | 1.51E-48 | -1.69E-46 |
| MS.gene059402 | MS.gene62849 | 0.831607 | 1.52E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 59 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGTCAGCCCGATTCTTC+TGG | 0.153062 | 8.4:-22943837 | MS.gene62849:CDS |
| ACATCATGCTTCTGATTTCT+TGG | 0.217240 | 8.4:+22942996 | None:intergenic |
| TTTGAAATTCTGTCTTTATC+TGG | 0.274522 | 8.4:-22943610 | MS.gene62849:CDS |
| TTCGTCAGCCCGATTCTTCT+GGG | 0.316075 | 8.4:-22943836 | MS.gene62849:CDS |
| GATATTAATGTGTCTCTTCC+TGG | 0.316878 | 8.4:-22942834 | MS.gene62849:CDS |
| CTTCCTTCCGTGGAGATAAT+TGG | 0.333200 | 8.4:-22942899 | MS.gene62849:CDS |
| GTTCCTCCTCCACTTTCATT+TGG | 0.347793 | 8.4:+22943577 | None:intergenic |
| AGGCGGCATGAGTGTGTCTT+TGG | 0.382271 | 8.4:-22943542 | MS.gene62849:CDS |
| CGGAGGAGTAGCTGGTTTGT+TGG | 0.386323 | 8.4:-22943494 | MS.gene62849:CDS |
| AGAAAATGAAATAACCTTCA+TGG | 0.401967 | 8.4:+22943920 | None:intergenic |
| GAATGGGTCCCTTGCTCTGT+TGG | 0.411486 | 8.4:-22944257 | MS.gene62849:CDS |
| TTATCCTTTGCATCCGATGC+TGG | 0.421865 | 8.4:+22942867 | None:intergenic |
| GGAGGAACACGAAGCAGATC+AGG | 0.444348 | 8.4:-22943562 | MS.gene62849:CDS |
| GTTGTTGGCGGAGGAGTAGC+TGG | 0.461135 | 8.4:-22943502 | MS.gene62849:CDS |
| GTATGCATTCTTTCAGCAAA+TGG | 0.463040 | 8.4:-22943879 | MS.gene62849:CDS |
| AGTCCTGATGGACGTGTTGT+TGG | 0.477746 | 8.4:-22943517 | MS.gene62849:CDS |
| TTCTTGGCTTCTGCTCATGT+TGG | 0.484881 | 8.4:+22943012 | None:intergenic |
| CCGCCAACAACACGTCCATC+AGG | 0.492937 | 8.4:+22943514 | None:intergenic |
| GTAGGGATGGGAACAACAGC+AGG | 0.496848 | 8.4:+22942954 | None:intergenic |
| CACATCATCACTGTTAATGC+TGG | 0.504861 | 8.4:-22944218 | MS.gene62849:CDS |
| GATAGAATAAATACCTGCAC+TGG | 0.507918 | 8.4:+22943460 | None:intergenic |
| GAAGTTACTGATGATAGAAT+AGG | 0.508118 | 8.4:+22942918 | None:intergenic |
| TACTGGATCAAGAGTAGGGA+TGG | 0.511973 | 8.4:+22942941 | None:intergenic |
| TCCTTATGAAATTAGCCTCC+AGG | 0.516288 | 8.4:+22942816 | None:intergenic |
| ATGTTAGGATGTTACCATGA+AGG | 0.517184 | 8.4:-22943934 | MS.gene62849:intron |
| ACTGATGATAGAATAGGTAC+TGG | 0.519373 | 8.4:+22942924 | None:intergenic |
| TCGTCAGCCCGATTCTTCTG+GGG | 0.541650 | 8.4:-22943835 | MS.gene62849:CDS |
| CAGCATTAACAGTGATGATG+TGG | 0.544475 | 8.4:+22944219 | None:intergenic |
| AGGAGTAGCTGGTTTGTTGG+TGG | 0.545177 | 8.4:-22943491 | MS.gene62849:CDS |
| ATAGGTACTGGATCAAGAGT+AGG | 0.547053 | 8.4:+22942936 | None:intergenic |
| CCTGATGGACGTGTTGTTGG+CGG | 0.547329 | 8.4:-22943514 | MS.gene62849:CDS |
| GGTGGCTGCAAGTCCAGTGC+AGG | 0.550883 | 8.4:-22943473 | MS.gene62849:intron |
| ATGCCAAATGAAAGTGGAGG+AGG | 0.551611 | 8.4:-22943580 | MS.gene62849:CDS |
| GTGTCTTTGGCAAGTCCTGA+TGG | 0.556787 | 8.4:-22943529 | MS.gene62849:CDS |
| TCGTTCATGCCAAATGAAAG+TGG | 0.559940 | 8.4:-22943586 | MS.gene62849:CDS |
| AAATTTGAACCAACAGAGCA+AGG | 0.567744 | 8.4:+22944248 | None:intergenic |
| TAGGTACTGGATCAAGAGTA+GGG | 0.580504 | 8.4:+22942937 | None:intergenic |
| CGTCAGCCCGATTCTTCTGG+GGG | 0.586127 | 8.4:-22943834 | MS.gene62849:CDS |
| GACACATTAATATCAGCAGC+GGG | 0.589557 | 8.4:+22942843 | None:intergenic |
| CATCACTGTTAATGCTGGAG+AGG | 0.596487 | 8.4:-22944213 | MS.gene62849:intron |
| AATTTGAACCAACAGAGCAA+GGG | 0.597677 | 8.4:+22944249 | None:intergenic |
| TTGGTCTGCTGTGCCAGCAT+CGG | 0.597910 | 8.4:-22942880 | MS.gene62849:CDS |
| GATGGACGTGTTGTTGGCGG+AGG | 0.605100 | 8.4:-22943511 | MS.gene62849:CDS |
| TGTGCCAGCATCGGATGCAA+AGG | 0.609579 | 8.4:-22942871 | MS.gene62849:CDS |
| TCATCAGTAACTTCCTTCCG+TGG | 0.610671 | 8.4:-22942909 | MS.gene62849:CDS |
| GAAAGAATGCATACCGCTCG+AGG | 0.613852 | 8.4:+22943888 | None:intergenic |
| TGTATCTACCAGGTAGTGGT+TGG | 0.624215 | 8.4:-22943053 | MS.gene62849:intron |
| AGACCAATTATCTCCACGGA+AGG | 0.635192 | 8.4:+22942896 | None:intergenic |
| TTCTCAGCAAGGACCTCGAG+CGG | 0.641808 | 8.4:-22943901 | MS.gene62849:CDS |
| AGCATTAACAGTGATGATGT+GGG | 0.643782 | 8.4:+22944220 | None:intergenic |
| ACTGGATCAAGAGTAGGGAT+GGG | 0.644029 | 8.4:+22942942 | None:intergenic |
| CAGCAGACCAATTATCTCCA+CGG | 0.646524 | 8.4:+22942892 | None:intergenic |
| AGACACATTAATATCAGCAG+CGG | 0.659162 | 8.4:+22942842 | None:intergenic |
| AACAACAGCAGGAGATGACA+CGG | 0.660123 | 8.4:+22942965 | None:intergenic |
| GGAACACGAAGCAGATCAGG+CGG | 0.674892 | 8.4:-22943559 | MS.gene62849:CDS |
| AAGAAATCAGAAGCATGATG+TGG | 0.682976 | 8.4:-22942994 | MS.gene62849:CDS |
| ATTAATGTGTCTCTTCCTGG+AGG | 0.686956 | 8.4:-22942831 | MS.gene62849:CDS |
| TTCATGCCAAATGAAAGTGG+AGG | 0.721594 | 8.4:-22943583 | MS.gene62849:CDS |
| GCATTAACAGTGATGATGTG+GGG | 0.743775 | 8.4:+22944221 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAGTGATGATAAAATT+AGG | - | chr8.4:22942982-22943001 | MS.gene62849:CDS | 20.0% |
| !! | ATGAAGTGATGATAAAATTA+GGG | - | chr8.4:22942983-22943002 | MS.gene62849:CDS | 20.0% |
| !!! | TTGAATGAACCTTTTTAATT+TGG | - | chr8.4:22943713-22943732 | MS.gene62849:intron | 20.0% |
| ! | AGAAAATGAAATAACCTTCA+TGG | + | chr8.4:22943169-22943188 | None:intergenic | 25.0% |
| ! | ATAAACAGAATAAAAGTGAG+AGG | - | chr8.4:22943013-22943032 | MS.gene62849:CDS | 25.0% |
| ! | TAAACAGAATAAAAGTGAGA+GGG | - | chr8.4:22943014-22943033 | MS.gene62849:CDS | 25.0% |
| ! | TAAGAGTTATCTTTCTCAAA+TGG | + | chr8.4:22943820-22943839 | None:intergenic | 25.0% |
| ! | TATAGAAGAGAACTTTCATT+TGG | - | chr8.4:22943329-22943348 | MS.gene62849:intron | 25.0% |
| !! | TTTGAAATTCTGTCTTTATC+TGG | - | chr8.4:22943476-22943495 | MS.gene62849:CDS | 25.0% |
| !!! | TTTTTAATTCCCCAAATAAC+AGG | + | chr8.4:22942934-22942953 | None:intergenic | 25.0% |
| ACAAAATTGCTGACAATCAT+CGG | + | chr8.4:22943122-22943141 | None:intergenic | 30.0% | |
| AGGTATTTATTCTATCCGTA+AGG | - | chr8.4:22943633-22943652 | MS.gene62849:intron | 30.0% | |
| ATTTCAAACATGTATCTACC+AGG | - | chr8.4:22944023-22944042 | MS.gene62849:intron | 30.0% | |
| ATTTGCAAAATTCTCCCTTA+CGG | + | chr8.4:22943651-22943670 | None:intergenic | 30.0% | |
| GAAAGTTCTCTTCTATAAGA+TGG | + | chr8.4:22943326-22943345 | None:intergenic | 30.0% | |
| GAAGTTACTGATGATAGAAT+AGG | + | chr8.4:22944171-22944190 | None:intergenic | 30.0% | |
| GGTATTTATTCTATCCGTAA+GGG | - | chr8.4:22943634-22943653 | MS.gene62849:intron | 30.0% | |
| GTAGATCATTAAATGCATTG+TGG | + | chr8.4:22943357-22943376 | None:intergenic | 30.0% | |
| TATGCTGTAATCCTGTTATT+TGG | - | chr8.4:22942920-22942939 | MS.gene62849:CDS | 30.0% | |
| TGAATCACGCCAAATTAAAA+AGG | + | chr8.4:22943725-22943744 | None:intergenic | 30.0% | |
| TTATAGCAACATGAATAAGC+TGG | - | chr8.4:22943951-22943970 | MS.gene62849:intron | 30.0% | |
| TTTGTGTGTATGGTTATGTT+AGG | - | chr8.4:22943137-22943156 | MS.gene62849:intron | 30.0% | |
| ! | ATGCTGTAATCCTGTTATTT+GGG | - | chr8.4:22942921-22942940 | MS.gene62849:CDS | 30.0% |
| ! | GGTAGATACATGTTTGAAAT+TGG | + | chr8.4:22944023-22944042 | None:intergenic | 30.0% |
| !! | GTTATTTCATTTTCTCAGCA+AGG | - | chr8.4:22943174-22943193 | MS.gene62849:intron | 30.0% |
| !!! | ACTTCTTTTTCAGTGATAAC+TGG | - | chr8.4:22943084-22943103 | MS.gene62849:intron | 30.0% |
| AAATTTGAACCAACAGAGCA+AGG | + | chr8.4:22942841-22942860 | None:intergenic | 35.0% | |
| AATTTGAACCAACAGAGCAA+GGG | + | chr8.4:22942840-22942859 | None:intergenic | 35.0% | |
| ACATCATGCTTCTGATTTCT+TGG | + | chr8.4:22944093-22944112 | None:intergenic | 35.0% | |
| ACTGATGATAGAATAGGTAC+TGG | + | chr8.4:22944165-22944184 | None:intergenic | 35.0% | |
| AGACACATTAATATCAGCAG+CGG | + | chr8.4:22944247-22944266 | None:intergenic | 35.0% | |
| ATCCCACTATATGCTCAAAA+AGG | + | chr8.4:22943406-22943425 | None:intergenic | 35.0% | |
| ATGTTAGGATGTTACCATGA+AGG | - | chr8.4:22943152-22943171 | MS.gene62849:intron | 35.0% | |
| GAAATGGAGTTGTCATTGTA+AGG | + | chr8.4:22943902-22943921 | None:intergenic | 35.0% | |
| GAATGTTTGTTCGCTAGAAA+TGG | + | chr8.4:22943918-22943937 | None:intergenic | 35.0% | |
| GATAGAATAAATACCTGCAC+TGG | + | chr8.4:22943629-22943648 | None:intergenic | 35.0% | |
| GATATTAATGTGTCTCTTCC+TGG | - | chr8.4:22944252-22944271 | MS.gene62849:CDS | 35.0% | |
| GTATGCATTCTTTCAGCAAA+TGG | - | chr8.4:22943207-22943226 | MS.gene62849:intron | 35.0% | |
| TCTAGCGAACAAACATTCAA+TGG | - | chr8.4:22943920-22943939 | MS.gene62849:CDS | 35.0% | |
| ! | AAGAAATCAGAAGCATGATG+TGG | - | chr8.4:22944092-22944111 | MS.gene62849:intron | 35.0% |
| ! | AGCATTAACAGTGATGATGT+GGG | + | chr8.4:22942869-22942888 | None:intergenic | 35.0% |
| ! | TGCTGTAATCCTGTTATTTG+GGG | - | chr8.4:22942922-22942941 | MS.gene62849:CDS | 35.0% |
| ! | TGTCAGCAATTTTGTGTGTA+TGG | - | chr8.4:22943127-22943146 | MS.gene62849:intron | 35.0% |
| ! | TTAATTTGGCGTGATTCAAG+TGG | - | chr8.4:22943727-22943746 | MS.gene62849:intron | 35.0% |
| !! | TGCCTTTTTGAGCATATAGT+GGG | - | chr8.4:22943401-22943420 | MS.gene62849:intron | 35.0% |
| !! | TTTTGAGCATATAGTGGGAT+TGG | - | chr8.4:22943406-22943425 | MS.gene62849:intron | 35.0% |
| AACATGTATCTACCAGGTAG+TGG | - | chr8.4:22944029-22944048 | MS.gene62849:intron | 40.0% | |
| AGTGATCACACAGATATGAC+AGG | + | chr8.4:22943063-22943082 | None:intergenic | 40.0% | |
| ATTAATGTGTCTCTTCCTGG+AGG | - | chr8.4:22944255-22944274 | MS.gene62849:CDS | 40.0% | |
| CACATCATCACTGTTAATGC+TGG | - | chr8.4:22942868-22942887 | MS.gene62849:CDS | 40.0% | |
| GACACATTAATATCAGCAGC+GGG | + | chr8.4:22944246-22944265 | None:intergenic | 40.0% | |
| GTTTGAGTCTCTTAAGCATG+TGG | - | chr8.4:22943756-22943775 | MS.gene62849:intron | 40.0% | |
| TAAAACTACCAACCACTACC+TGG | + | chr8.4:22944044-22944063 | None:intergenic | 40.0% | |
| TCGTTCATGCCAAATGAAAG+TGG | - | chr8.4:22943500-22943519 | MS.gene62849:CDS | 40.0% | |
| TTCATGCCAAATGAAAGTGG+AGG | - | chr8.4:22943503-22943522 | MS.gene62849:CDS | 40.0% | |
| ! | CAGCATTAACAGTGATGATG+TGG | + | chr8.4:22942870-22942889 | None:intergenic | 40.0% |
| ! | GCATTAACAGTGATGATGTG+GGG | + | chr8.4:22942868-22942887 | None:intergenic | 40.0% |
| !! | ACTTATCTCGGTGTTTCTAC+AGG | - | chr8.4:22943448-22943467 | MS.gene62849:intron | 40.0% |
| !! | ATAGGTACTGGATCAAGAGT+AGG | + | chr8.4:22944153-22944172 | None:intergenic | 40.0% |
| !! | CTTATCTCGGTGTTTCTACA+GGG | - | chr8.4:22943449-22943468 | MS.gene62849:intron | 40.0% |
| !! | GTGCCTTTTTGAGCATATAG+TGG | - | chr8.4:22943400-22943419 | MS.gene62849:intron | 40.0% |
| !! | TAGGTACTGGATCAAGAGTA+GGG | + | chr8.4:22944152-22944171 | None:intergenic | 40.0% |
| !!! | GGTAGTGGTTGGTAGTTTTA+TGG | - | chr8.4:22944044-22944063 | MS.gene62849:intron | 40.0% |
| AACAACAGCAGGAGATGACA+CGG | + | chr8.4:22944124-22944143 | None:intergenic | 45.0% | |
| ACTGGATCAAGAGTAGGGAT+GGG | + | chr8.4:22944147-22944166 | None:intergenic | 45.0% | |
| AGACCAATTATCTCCACGGA+AGG | + | chr8.4:22944193-22944212 | None:intergenic | 45.0% | |
| ATGCCAAATGAAAGTGGAGG+AGG | - | chr8.4:22943506-22943525 | MS.gene62849:CDS | 45.0% | |
| CAGCAGACCAATTATCTCCA+CGG | + | chr8.4:22944197-22944216 | None:intergenic | 45.0% | |
| CATCACTGTTAATGCTGGAG+AGG | - | chr8.4:22942873-22942892 | MS.gene62849:CDS | 45.0% | |
| CTTCCTTCCGTGGAGATAAT+TGG | - | chr8.4:22944187-22944206 | MS.gene62849:intron | 45.0% | |
| GCACGCACAGTTACTTATCT+CGG | - | chr8.4:22943436-22943455 | MS.gene62849:intron | 45.0% | |
| GTCTCTTAAGCATGTGGTCA+TGG | - | chr8.4:22943762-22943781 | MS.gene62849:intron | 45.0% | |
| GTTCCTCCTCCACTTTCATT+TGG | + | chr8.4:22943512-22943531 | None:intergenic | 45.0% | |
| TACTGGATCAAGAGTAGGGA+TGG | + | chr8.4:22944148-22944167 | None:intergenic | 45.0% | |
| TCATCAGTAACTTCCTTCCG+TGG | - | chr8.4:22944177-22944196 | MS.gene62849:intron | 45.0% | |
| TTATCCTTTGCATCCGATGC+TGG | + | chr8.4:22944222-22944241 | None:intergenic | 45.0% | |
| TTCTTGGCTTCTGCTCATGT+TGG | + | chr8.4:22944077-22944096 | None:intergenic | 45.0% | |
| TTTGGCGTGATTCAAGTGGT+CGG | - | chr8.4:22943731-22943750 | MS.gene62849:intron | 45.0% | |
| ! | TGTATCTACCAGGTAGTGGT+TGG | - | chr8.4:22944033-22944052 | MS.gene62849:intron | 45.0% |
| !!! | GTGGTTGGTAGTTTTATGGC+AGG | - | chr8.4:22944048-22944067 | MS.gene62849:intron | 45.0% |
| AATGTGCCCCCAGAAGAATC+GGG | + | chr8.4:22943261-22943280 | None:intergenic | 50.0% | |
| CAATGTGCCCCCAGAAGAAT+CGG | + | chr8.4:22943262-22943281 | None:intergenic | 50.0% | |
| GAAAGAATGCATACCGCTCG+AGG | + | chr8.4:22943201-22943220 | None:intergenic | 50.0% | |
| GTGTCTTTGGCAAGTCCTGA+TGG | - | chr8.4:22943557-22943576 | MS.gene62849:CDS | 50.0% | |
| TTCGTCAGCCCGATTCTTCT+GGG | - | chr8.4:22943250-22943269 | MS.gene62849:intron | 50.0% | |
| ! | AGTCCTGATGGACGTGTTGT+TGG | - | chr8.4:22943569-22943588 | MS.gene62849:CDS | 50.0% |
| ! | TGGGGGCACATTGACATATG+AGG | - | chr8.4:22943269-22943288 | MS.gene62849:intron | 50.0% |
| !! | AGGAGTAGCTGGTTTGTTGG+TGG | - | chr8.4:22943595-22943614 | MS.gene62849:CDS | 50.0% |
| AGGCGGCATGAGTGTGTCTT+TGG | - | chr8.4:22943544-22943563 | MS.gene62849:CDS | 55.0% | |
| CTTCGTCAGCCCGATTCTTC+TGG | - | chr8.4:22943249-22943268 | MS.gene62849:intron | 55.0% | |
| GAATGGGTCCCTTGCTCTGT+TGG | - | chr8.4:22942829-22942848 | MS.gene62849:CDS | 55.0% | |
| GGAACACGAAGCAGATCAGG+CGG | - | chr8.4:22943527-22943546 | MS.gene62849:CDS | 55.0% | |
| GGAGGAACACGAAGCAGATC+AGG | - | chr8.4:22943524-22943543 | MS.gene62849:CDS | 55.0% | |
| GTAGGGATGGGAACAACAGC+AGG | + | chr8.4:22944135-22944154 | None:intergenic | 55.0% | |
| TCGTCAGCCCGATTCTTCTG+GGG | - | chr8.4:22943251-22943270 | MS.gene62849:intron | 55.0% | |
| TTCTCAGCAAGGACCTCGAG+CGG | - | chr8.4:22943185-22943204 | MS.gene62849:intron | 55.0% | |
| TTGGTCTGCTGTGCCAGCAT+CGG | - | chr8.4:22944206-22944225 | MS.gene62849:intron | 55.0% | |
| ! | CCTGATGGACGTGTTGTTGG+CGG | - | chr8.4:22943572-22943591 | MS.gene62849:CDS | 55.0% |
| ! | TGTGCCAGCATCGGATGCAA+AGG | - | chr8.4:22944215-22944234 | MS.gene62849:CDS | 55.0% |
| !! | CGGAGGAGTAGCTGGTTTGT+TGG | - | chr8.4:22943592-22943611 | MS.gene62849:CDS | 55.0% |
| CCGCCAACAACACGTCCATC+AGG | + | chr8.4:22943575-22943594 | None:intergenic | 60.0% | |
| CGTCAGCCCGATTCTTCTGG+GGG | - | chr8.4:22943252-22943271 | MS.gene62849:intron | 60.0% | |
| GGCGTGATTCAAGTGGTCGG+TGG | - | chr8.4:22943734-22943753 | MS.gene62849:intron | 60.0% | |
| GTTGTTGGCGGAGGAGTAGC+TGG | - | chr8.4:22943584-22943603 | MS.gene62849:CDS | 60.0% | |
| ! | GATGGACGTGTTGTTGGCGG+AGG | - | chr8.4:22943575-22943594 | MS.gene62849:CDS | 60.0% |
| GGTGGCTGCAAGTCCAGTGC+AGG | - | chr8.4:22943613-22943632 | MS.gene62849:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 22942827 | 22944281 | 22942827 | ID=MS.gene62849 |
| chr8.4 | mRNA | 22942827 | 22944281 | 22942827 | ID=MS.gene62849.t1;Parent=MS.gene62849 |
| chr8.4 | exon | 22944214 | 22944281 | 22944214 | ID=MS.gene62849.t1.exon1;Parent=MS.gene62849.t1 |
| chr8.4 | CDS | 22944214 | 22944281 | 22944214 | ID=cds.MS.gene62849.t1;Parent=MS.gene62849.t1 |
| chr8.4 | exon | 22943818 | 22943949 | 22943818 | ID=MS.gene62849.t1.exon2;Parent=MS.gene62849.t1 |
| chr8.4 | CDS | 22943818 | 22943949 | 22943818 | ID=cds.MS.gene62849.t1;Parent=MS.gene62849.t1 |
| chr8.4 | exon | 22943474 | 22943638 | 22943474 | ID=MS.gene62849.t1.exon3;Parent=MS.gene62849.t1 |
| chr8.4 | CDS | 22943474 | 22943638 | 22943474 | ID=cds.MS.gene62849.t1;Parent=MS.gene62849.t1 |
| chr8.4 | exon | 22942827 | 22943063 | 22942827 | ID=MS.gene62849.t1.exon4;Parent=MS.gene62849.t1 |
| chr8.4 | CDS | 22942827 | 22943063 | 22942827 | ID=cds.MS.gene62849.t1;Parent=MS.gene62849.t1 |
| Gene Sequence |
| Protein sequence |
