Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059402.t1 | XP_013452188.1 | 87.1 | 116 | 15 | 0 | 1 | 116 | 22 | 137 | 1.80E-53 | 218.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059402.t1 | P62929 | 39.7 | 116 | 62 | 5 | 2 | 116 | 22 | 130 | 6.8e-14 | 78.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059402.t1 | A0A072U9W9 | 87.1 | 116 | 15 | 0 | 1 | 116 | 22 | 137 | 1.3e-53 | 218.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04932 | MS.gene059402 | 0.813494 | 2.49E-51 | -1.69E-46 |
| MS.gene049549 | MS.gene059402 | 0.829795 | 4.21E-55 | -1.69E-46 |
| MS.gene050971 | MS.gene059402 | -0.819399 | 1.19E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene059402 | 0.805991 | 1.02E-49 | -1.69E-46 |
| MS.gene05240 | MS.gene059402 | 0.826202 | 3.09E-54 | -1.69E-46 |
| MS.gene052702 | MS.gene059402 | 0.822685 | 2.08E-53 | -1.69E-46 |
| MS.gene053031 | MS.gene059402 | 0.813484 | 2.50E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene059402 | -0.814758 | 1.31E-51 | -1.69E-46 |
| MS.gene053912 | MS.gene059402 | -0.801285 | 9.68E-49 | -1.69E-46 |
| MS.gene054146 | MS.gene059402 | 0.811263 | 7.64E-51 | -1.69E-46 |
| MS.gene054181 | MS.gene059402 | 0.945459 | 2.94E-104 | -1.69E-46 |
| MS.gene054290 | MS.gene059402 | 0.804366 | 2.24E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene059402 | 0.807678 | 4.50E-50 | -1.69E-46 |
| MS.gene055909 | MS.gene059402 | -0.800183 | 1.62E-48 | -1.69E-46 |
| MS.gene055959 | MS.gene059402 | 0.819334 | 1.23E-52 | -1.69E-46 |
| MS.gene056590 | MS.gene059402 | 0.80872 | 2.70E-50 | -1.69E-46 |
| MS.gene056591 | MS.gene059402 | 0.808143 | 3.58E-50 | -1.69E-46 |
| MS.gene056697 | MS.gene059402 | 0.803823 | 2.90E-49 | -1.69E-46 |
| MS.gene057544 | MS.gene059402 | 0.825312 | 5.02E-54 | -1.69E-46 |
| MS.gene058928 | MS.gene059402 | -0.804709 | 1.90E-49 | -1.69E-46 |
| MS.gene059037 | MS.gene059402 | 0.802472 | 5.52E-49 | -1.69E-46 |
| MS.gene059038 | MS.gene059402 | 0.801139 | 1.04E-48 | -1.69E-46 |
| MS.gene059294 | MS.gene059402 | -0.805316 | 1.42E-49 | -1.69E-46 |
| MS.gene059401 | MS.gene059402 | 0.801252 | 9.83E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene059674 | -0.811661 | 6.26E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene059807 | -0.80589 | 1.07E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene059953 | 0.807579 | 4.72E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene059955 | 0.830739 | 2.48E-55 | -1.69E-46 |
| MS.gene059402 | MS.gene060372 | -0.818521 | 1.88E-52 | -1.69E-46 |
| MS.gene059402 | MS.gene062005 | 0.822541 | 2.24E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene062180 | 0.805415 | 1.35E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene062651 | 0.8065 | 7.98E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene063988 | 0.814523 | 1.48E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene06593 | 0.813648 | 2.30E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene066937 | 0.807653 | 4.55E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene066938 | 0.828475 | 8.81E-55 | -1.69E-46 |
| MS.gene059402 | MS.gene066987 | 0.84653 | 2.05E-59 | -1.69E-46 |
| MS.gene059402 | MS.gene067575 | 0.810398 | 1.18E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene06805 | 0.813608 | 2.35E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene069482 | 0.874543 | 6.22E-68 | -1.69E-46 |
| MS.gene059402 | MS.gene070207 | -0.801154 | 1.03E-48 | -1.69E-46 |
| MS.gene059402 | MS.gene070257 | 0.821119 | 4.78E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene070651 | 0.820909 | 5.35E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene071108 | 0.819629 | 1.05E-52 | -1.69E-46 |
| MS.gene059402 | MS.gene071294 | -0.802318 | 5.94E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene071482 | 0.834087 | 3.67E-56 | -1.69E-46 |
| MS.gene059402 | MS.gene073286 | 0.864692 | 1.01E-64 | -1.69E-46 |
| MS.gene059402 | MS.gene073526 | 0.821614 | 3.68E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene073894 | -0.814252 | 1.69E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene07591 | 0.875904 | 2.13E-68 | -1.69E-46 |
| MS.gene059402 | MS.gene07837 | 0.817948 | 2.53E-52 | -1.69E-46 |
| MS.gene059402 | MS.gene07840 | 0.811294 | 7.52E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene08083 | -0.823848 | 1.11E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene21471 | -0.81486 | 1.24E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene22386 | -0.829769 | 4.28E-55 | -1.69E-46 |
| MS.gene059402 | MS.gene24862 | 0.810666 | 1.03E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene26705 | 0.804715 | 1.89E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene28355 | 0.831731 | 1.41E-55 | -1.69E-46 |
| MS.gene059402 | MS.gene28427 | 0.836044 | 1.18E-56 | -1.69E-46 |
| MS.gene059402 | MS.gene28428 | 0.821249 | 4.46E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene28548 | 0.818785 | 1.64E-52 | -1.69E-46 |
| MS.gene059402 | MS.gene28594 | 0.822367 | 2.46E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene29995 | 0.803022 | 4.25E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene30518 | 0.808658 | 2.78E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene30725 | 0.867015 | 1.87E-65 | -1.69E-46 |
| MS.gene059402 | MS.gene32143 | 0.825984 | 3.48E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene33490 | 0.802407 | 5.69E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene33492 | 0.82511 | 5.60E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene33493 | 0.818399 | 2.00E-52 | -1.69E-46 |
| MS.gene059402 | MS.gene33494 | 0.815053 | 1.13E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene33495 | 0.838437 | 2.88E-57 | -1.69E-46 |
| MS.gene059402 | MS.gene33496 | 0.814553 | 1.45E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene33596 | 0.802541 | 5.34E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene33658 | -0.805297 | 1.43E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene34496 | -0.808395 | 3.16E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene35433 | 0.803622 | 3.19E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene35690 | 0.806362 | 8.53E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene35721 | -0.808238 | 3.42E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene35871 | 0.801992 | 6.93E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene37354 | 0.825649 | 4.18E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene37357 | 0.81328 | 2.77E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene37470 | -0.811968 | 5.37E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene37747 | 0.83623 | 1.06E-56 | -1.69E-46 |
| MS.gene059402 | MS.gene37749 | 0.841633 | 4.22E-58 | -1.69E-46 |
| MS.gene059402 | MS.gene38435 | 0.837639 | 4.62E-57 | -1.69E-46 |
| MS.gene059402 | MS.gene40171 | 0.815372 | 9.56E-52 | -1.69E-46 |
| MS.gene059402 | MS.gene40846 | 0.802155 | 6.42E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene41435 | -0.807395 | 5.16E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene41490 | 0.806999 | 6.26E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene42018 | 0.824106 | 9.66E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene42080 | 0.843239 | 1.58E-58 | -1.69E-46 |
| MS.gene059402 | MS.gene42084 | 0.801881 | 7.30E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene42096 | 0.809864 | 1.53E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene43162 | 0.800424 | 1.45E-48 | -1.69E-46 |
| MS.gene059402 | MS.gene43213 | 0.81582 | 7.60E-52 | -1.69E-46 |
| MS.gene059402 | MS.gene43392 | 0.812973 | 3.24E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene43874 | 0.820396 | 7.01E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene44654 | -0.808277 | 3.35E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene44712 | 0.812559 | 3.99E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene45003 | -0.801344 | 9.41E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene45228 | 0.840133 | 1.04E-57 | -1.69E-46 |
| MS.gene059402 | MS.gene46197 | 0.812705 | 3.71E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene46198 | 0.80627 | 8.93E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene46956 | -0.803061 | 4.17E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene47838 | 0.829517 | 4.93E-55 | -1.69E-46 |
| MS.gene059402 | MS.gene48184 | 0.806117 | 9.61E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene48573 | -0.819888 | 9.17E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene48805 | 0.817287 | 3.57E-52 | -1.69E-46 |
| MS.gene059402 | MS.gene48806 | 0.840515 | 8.30E-58 | -1.69E-46 |
| MS.gene059402 | MS.gene48807 | 0.833636 | 4.76E-56 | -1.69E-46 |
| MS.gene059402 | MS.gene49021 | 0.808081 | 3.69E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene49862 | 0.821918 | 3.13E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene50066 | 0.802532 | 5.36E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene50248 | 0.826963 | 2.03E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene50270 | 0.8077 | 4.45E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene50786 | 0.864691 | 1.01E-64 | -1.69E-46 |
| MS.gene059402 | MS.gene50787 | 0.823565 | 1.29E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene50789 | 0.808767 | 2.63E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene50790 | 0.852006 | 6.13E-61 | -1.69E-46 |
| MS.gene059402 | MS.gene51007 | 0.880598 | 4.81E-70 | -1.69E-46 |
| MS.gene059402 | MS.gene51118 | 0.803502 | 3.38E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene51120 | 0.809999 | 1.43E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene51331 | 0.823033 | 1.72E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene51453 | 0.805067 | 1.60E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene52248 | 0.827286 | 1.70E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene52368 | 0.840907 | 6.55E-58 | -1.69E-46 |
| MS.gene059402 | MS.gene52369 | 0.839914 | 1.19E-57 | -1.69E-46 |
| MS.gene059402 | MS.gene52371 | 0.835014 | 2.15E-56 | -1.69E-46 |
| MS.gene059402 | MS.gene52373 | 0.820594 | 6.32E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene52700 | 0.824838 | 6.50E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene52786 | -0.807287 | 5.44E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene53436 | 0.806881 | 6.63E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene53525 | -0.822794 | 1.96E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene54029 | 0.813621 | 2.33E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene54574 | 0.836867 | 7.27E-57 | -1.69E-46 |
| MS.gene059402 | MS.gene55820 | -0.809516 | 1.82E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene57807 | 0.867367 | 1.44E-65 | -1.69E-46 |
| MS.gene059402 | MS.gene58107 | 0.828058 | 1.11E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene58108 | 0.828974 | 6.67E-55 | -1.69E-46 |
| MS.gene059402 | MS.gene58344 | -0.809726 | 1.64E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene58345 | -0.82697 | 2.02E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene59003 | 0.8337 | 4.59E-56 | -1.69E-46 |
| MS.gene059402 | MS.gene59006 | 0.821676 | 3.56E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene59415 | 0.824668 | 7.13E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene59925 | -0.809643 | 1.71E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene60578 | 0.828458 | 8.89E-55 | -1.69E-46 |
| MS.gene059402 | MS.gene60840 | 0.829772 | 4.27E-55 | -1.69E-46 |
| MS.gene059402 | MS.gene60841 | 0.808415 | 3.13E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene60846 | 0.837995 | 3.74E-57 | -1.69E-46 |
| MS.gene059402 | MS.gene60847 | 0.830433 | 2.95E-55 | -1.69E-46 |
| MS.gene059402 | MS.gene61143 | 0.806967 | 6.36E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene62114 | 0.829148 | 6.05E-55 | -1.69E-46 |
| MS.gene059402 | MS.gene62117 | 0.805839 | 1.10E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene62849 | 0.831607 | 1.52E-55 | -1.69E-46 |
| MS.gene059402 | MS.gene62851 | 0.836688 | 8.08E-57 | -1.69E-46 |
| MS.gene059402 | MS.gene62852 | 0.80558 | 1.25E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene63012 | 0.809777 | 1.60E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene63444 | 0.801535 | 8.60E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene63913 | 0.807683 | 4.49E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene63914 | 0.833633 | 4.77E-56 | -1.69E-46 |
| MS.gene059402 | MS.gene63955 | -0.809479 | 1.85E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene64708 | 0.803756 | 2.99E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene65823 | 0.800597 | 1.34E-48 | -1.69E-46 |
| MS.gene059402 | MS.gene65948 | 0.805079 | 1.59E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene70062 | 0.839788 | 1.28E-57 | -1.69E-46 |
| MS.gene059402 | MS.gene70064 | 0.825581 | 4.34E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene70254 | 0.822023 | 2.96E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene71395 | 0.821747 | 3.43E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene71836 | -0.800433 | 1.44E-48 | -1.69E-46 |
| MS.gene059402 | MS.gene71892 | 0.81014 | 1.34E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene71924 | 0.833354 | 5.60E-56 | -1.69E-46 |
| MS.gene059402 | MS.gene71925 | 0.822971 | 1.78E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene72105 | 0.823189 | 1.58E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene72107 | 0.825847 | 3.75E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene72335 | 0.832689 | 8.19E-56 | -1.69E-46 |
| MS.gene059402 | MS.gene74029 | 0.813862 | 2.06E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene74553 | 0.800173 | 1.63E-48 | -1.69E-46 |
| MS.gene059402 | MS.gene74567 | 0.820962 | 5.20E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene74774 | 0.808367 | 3.21E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene74887 | 0.819096 | 1.39E-52 | -1.69E-46 |
| MS.gene059402 | MS.gene75396 | 0.818888 | 1.55E-52 | -1.69E-46 |
| MS.gene059402 | MS.gene75432 | -0.808553 | 2.93E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene75472 | 0.801272 | 9.74E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene76737 | 0.809199 | 2.13E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene76738 | 0.82342 | 1.40E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene77032 | 0.829196 | 5.89E-55 | -1.69E-46 |
| MS.gene059402 | MS.gene77033 | 0.817501 | 3.19E-52 | -1.69E-46 |
| MS.gene059402 | MS.gene77350 | 0.813839 | 2.09E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene77829 | 0.816398 | 5.65E-52 | -1.69E-46 |
| MS.gene059402 | MS.gene78182 | 0.810624 | 1.05E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene78424 | 0.806035 | 1.00E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene78431 | -0.800838 | 1.19E-48 | -1.69E-46 |
| MS.gene059402 | MS.gene78657 | 0.823647 | 1.24E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene79442 | 0.801457 | 8.92E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene79443 | 0.835315 | 1.80E-56 | -1.69E-46 |
| MS.gene059402 | MS.gene79444 | 0.809669 | 1.69E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene79445 | 0.831207 | 1.90E-55 | -1.69E-46 |
| MS.gene059402 | MS.gene79585 | 0.821853 | 3.24E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene79624 | 0.823501 | 1.34E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene80172 | -0.803003 | 4.29E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene80488 | 0.814945 | 1.19E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene80744 | 0.830739 | 2.48E-55 | -1.69E-46 |
| MS.gene059402 | MS.gene81349 | 0.838919 | 2.16E-57 | -1.69E-46 |
| MS.gene059402 | MS.gene81350 | 0.805072 | 1.59E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene82244 | 0.846372 | 2.26E-59 | -1.69E-46 |
| MS.gene059402 | MS.gene82245 | 0.809954 | 1.47E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene82418 | 0.812478 | 4.16E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene82855 | 0.830845 | 2.33E-55 | -1.69E-46 |
| MS.gene059402 | MS.gene82858 | 0.803822 | 2.90E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene82860 | 0.802974 | 4.35E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene83239 | 0.800552 | 1.37E-48 | -1.69E-46 |
| MS.gene059402 | MS.gene83490 | 0.822443 | 2.36E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene84193 | 0.811975 | 5.35E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene84195 | 0.805577 | 1.25E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene84373 | 0.825773 | 3.90E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene84397 | -0.800796 | 1.22E-48 | -1.69E-46 |
| MS.gene059402 | MS.gene84544 | -0.823537 | 1.31E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene85750 | 0.809192 | 2.14E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene85778 | 0.821846 | 3.25E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene87043 | 0.806946 | 6.42E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene87056 | 0.851369 | 9.29E-61 | -1.69E-46 |
| MS.gene059402 | MS.gene87222 | 0.816775 | 4.65E-52 | -1.69E-46 |
| MS.gene059402 | MS.gene87450 | 0.824117 | 9.60E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene87750 | 0.839221 | 1.80E-57 | -1.69E-46 |
| MS.gene059402 | MS.gene87888 | -0.813683 | 2.26E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene89380 | 0.821166 | 4.67E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene89772 | 0.867239 | 1.59E-65 | -1.69E-46 |
| MS.gene059402 | MS.gene89773 | 0.83586 | 1.31E-56 | -1.69E-46 |
| MS.gene059402 | MS.gene89774 | 0.857441 | 1.63E-62 | -1.69E-46 |
| MS.gene059402 | MS.gene89775 | 0.854967 | 8.65E-62 | -1.69E-46 |
| MS.gene059402 | MS.gene91215 | 0.807948 | 3.94E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene92335 | 0.813945 | 1.98E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene92886 | 0.810913 | 9.10E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene93200 | 0.809167 | 2.16E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene93632 | 0.802217 | 6.23E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene94571 | 0.823325 | 1.47E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene96171 | 0.809526 | 1.81E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene97182 | 0.802596 | 5.21E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene97499 | 0.803698 | 3.08E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene97500 | 0.820411 | 6.96E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene97597 | 0.832656 | 8.35E-56 | -1.69E-46 |
| MS.gene059402 | MS.gene97788 | 0.823442 | 1.38E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene99049 | 0.805197 | 1.50E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene99545 | 0.825933 | 3.58E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene99674 | -0.800766 | 1.24E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059402.t1 | MTR_6g047880 | 87.069 | 116 | 15 | 0 | 1 | 116 | 22 | 137 | 2.06e-72 | 212 |
| MS.gene059402.t1 | MTR_6g047900 | 75.424 | 118 | 22 | 3 | 1 | 116 | 22 | 134 | 3.82e-56 | 171 |
| MS.gene059402.t1 | MTR_7g029540 | 62.376 | 101 | 34 | 2 | 1 | 100 | 24 | 121 | 1.31e-37 | 123 |
| MS.gene059402.t1 | MTR_3g463570 | 50.000 | 112 | 52 | 3 | 1 | 111 | 23 | 131 | 3.41e-25 | 92.8 |
| MS.gene059402.t1 | MTR_3g463570 | 50.000 | 112 | 52 | 3 | 1 | 111 | 43 | 151 | 6.15e-25 | 92.4 |
| MS.gene059402.t1 | MTR_3g067280 | 43.750 | 112 | 60 | 2 | 1 | 112 | 22 | 130 | 5.39e-23 | 87.0 |
| MS.gene059402.t1 | MTR_3g067500 | 39.823 | 113 | 64 | 3 | 1 | 112 | 1 | 110 | 2.11e-22 | 84.7 |
| MS.gene059402.t1 | MTR_7g056817 | 43.590 | 117 | 58 | 5 | 1 | 112 | 22 | 135 | 3.06e-22 | 85.1 |
| MS.gene059402.t1 | MTR_3g067437 | 41.964 | 112 | 58 | 3 | 1 | 109 | 22 | 129 | 5.75e-22 | 84.3 |
| MS.gene059402.t1 | MTR_7g056803 | 43.519 | 108 | 48 | 2 | 18 | 112 | 27 | 134 | 6.16e-22 | 84.3 |
| MS.gene059402.t1 | MTR_3g067270 | 41.964 | 112 | 62 | 2 | 1 | 112 | 22 | 130 | 6.25e-22 | 84.3 |
| MS.gene059402.t1 | MTR_3g467750 | 41.964 | 112 | 62 | 2 | 1 | 112 | 22 | 130 | 6.25e-22 | 84.3 |
| MS.gene059402.t1 | MTR_3g067535 | 45.614 | 114 | 57 | 4 | 1 | 112 | 22 | 132 | 1.93e-21 | 83.2 |
| MS.gene059402.t1 | MTR_3g067550 | 42.241 | 116 | 62 | 3 | 1 | 112 | 1 | 115 | 8.12e-20 | 78.6 |
| MS.gene059402.t1 | MTR_3g067555 | 42.241 | 116 | 62 | 3 | 1 | 112 | 1 | 115 | 8.12e-20 | 78.6 |
| MS.gene059402.t1 | MTR_3g467760 | 50.000 | 74 | 35 | 1 | 39 | 112 | 35 | 106 | 9.91e-20 | 78.2 |
| MS.gene059402.t1 | MTR_3g067555 | 42.241 | 116 | 62 | 3 | 1 | 112 | 9 | 123 | 1.07e-19 | 78.2 |
| MS.gene059402.t1 | MTR_3g067540 | 42.241 | 116 | 62 | 3 | 1 | 112 | 22 | 136 | 1.16e-19 | 78.6 |
| MS.gene059402.t1 | MTR_3g067555 | 42.241 | 116 | 62 | 3 | 1 | 112 | 22 | 136 | 1.16e-19 | 78.6 |
| MS.gene059402.t1 | MTR_6g017150 | 48.315 | 89 | 42 | 3 | 25 | 112 | 48 | 133 | 1.88e-19 | 78.2 |
| MS.gene059402.t1 | MTR_7g044980 | 40.351 | 114 | 60 | 5 | 1 | 113 | 21 | 127 | 3.03e-19 | 77.8 |
| MS.gene059402.t1 | MTR_6g036620 | 39.640 | 111 | 64 | 2 | 2 | 112 | 23 | 130 | 3.24e-18 | 74.7 |
| MS.gene059402.t1 | MTR_3g436100 | 39.423 | 104 | 50 | 3 | 25 | 116 | 51 | 153 | 5.58e-18 | 74.7 |
| MS.gene059402.t1 | MTR_8g022400 | 43.478 | 92 | 48 | 3 | 22 | 112 | 44 | 132 | 1.76e-17 | 73.2 |
| MS.gene059402.t1 | MTR_8g022430 | 41.304 | 92 | 51 | 2 | 25 | 115 | 47 | 136 | 5.98e-17 | 71.6 |
| MS.gene059402.t1 | MTR_3g067580 | 38.462 | 117 | 61 | 5 | 1 | 112 | 30 | 140 | 1.44e-16 | 70.9 |
| MS.gene059402.t1 | MTR_3g067430 | 38.136 | 118 | 64 | 3 | 1 | 112 | 22 | 136 | 1.73e-16 | 70.5 |
| MS.gene059402.t1 | MTR_3g067510 | 38.462 | 117 | 55 | 5 | 1 | 112 | 22 | 126 | 2.36e-16 | 69.7 |
| MS.gene059402.t1 | MTR_8g022420 | 42.045 | 88 | 48 | 2 | 23 | 109 | 44 | 129 | 2.56e-16 | 70.1 |
| MS.gene059402.t1 | MTR_3g067510 | 38.462 | 117 | 55 | 5 | 1 | 112 | 27 | 131 | 2.77e-16 | 69.7 |
| MS.gene059402.t1 | MTR_3g067570 | 41.667 | 96 | 50 | 4 | 1 | 95 | 1 | 91 | 3.07e-16 | 68.6 |
| MS.gene059402.t1 | MTR_1g019650 | 42.308 | 104 | 45 | 4 | 1 | 103 | 22 | 111 | 4.03e-16 | 68.9 |
| MS.gene059402.t1 | MTR_7g044920 | 38.136 | 118 | 65 | 4 | 1 | 113 | 21 | 135 | 2.20e-15 | 67.8 |
| MS.gene059402.t1 | MTR_6g017170 | 39.423 | 104 | 59 | 3 | 1 | 102 | 22 | 123 | 3.99e-15 | 66.6 |
| MS.gene059402.t1 | MTR_4g026590 | 34.746 | 118 | 70 | 2 | 1 | 112 | 23 | 139 | 1.08e-13 | 63.5 |
| MS.gene059402.t1 | MTR_8g461020 | 36.842 | 95 | 55 | 2 | 1 | 94 | 23 | 113 | 9.61e-11 | 55.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 29 sgRNAs with CRISPR-Local
Find 33 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAGTCCTAATGTTGATTA+TGG | 0.176691 | 6.3:-42576333 | MS.gene059402:CDS |
| AGCATCTTCAAGAAGTCTTT+TGG | 0.221192 | 6.3:+42576246 | None:intergenic |
| CACAACCTTCACCGCACGTT+TGG | 0.331360 | 6.3:+42576508 | None:intergenic |
| AGAAGCAAGCCGTTGTTATA+TGG | 0.349746 | 6.3:-42576550 | MS.gene059402:CDS |
| ACAACCTTCACCGCACGTTT+GGG | 0.398282 | 6.3:+42576509 | None:intergenic |
| ACAAGATCTTTATATGATGC+AGG | 0.450360 | 6.3:+42576441 | None:intergenic |
| CACAAACCATAATCAACATT+AGG | 0.450638 | 6.3:+42576327 | None:intergenic |
| TTTGTTTCCCCACTGATCCA+TGG | 0.464352 | 6.3:-42576485 | MS.gene059402:CDS |
| TTGTTTCCCCACTGATCCAT+GGG | 0.469687 | 6.3:-42576484 | MS.gene059402:CDS |
| AAAGATCTTGTGAAGATACC+TGG | 0.482787 | 6.3:-42576429 | MS.gene059402:CDS |
| ATCTTCTGCCTCAGATAAAG+AGG | 0.487203 | 6.3:+42576299 | None:intergenic |
| CTTCTTGAAGATGCTTGAGA+TGG | 0.501142 | 6.3:-42576238 | MS.gene059402:CDS |
| TTCCCCACTGATCCATGGGC+GGG | 0.517994 | 6.3:-42576480 | MS.gene059402:CDS |
| ACATCCCAAACGTGCGGTGA+AGG | 0.531716 | 6.3:-42576513 | MS.gene059402:CDS |
| TCACCCGCCCATGGATCAGT+GGG | 0.539884 | 6.3:+42576477 | None:intergenic |
| GATCTTTATATGATGCAGGT+TGG | 0.554280 | 6.3:+42576445 | None:intergenic |
| GAATGCAAAGAGAAGGGACG+TGG | 0.558645 | 6.3:-42576375 | MS.gene059402:CDS |
| TCATGTGGAATGCAAAGAGA+AGG | 0.568615 | 6.3:-42576382 | MS.gene059402:CDS |
| GTGTGTTGCCTCTTTATCTG+AGG | 0.572934 | 6.3:-42576307 | MS.gene059402:CDS |
| CCATAATCAACATTAGGACT+AGG | 0.583229 | 6.3:+42576333 | None:intergenic |
| CAATCATATTCACCCGCCCA+TGG | 0.588423 | 6.3:+42576468 | None:intergenic |
| TTCACCCGCCCATGGATCAG+TGG | 0.592781 | 6.3:+42576476 | None:intergenic |
| AAGATCTTGTGAAGATACCT+GGG | 0.596931 | 6.3:-42576428 | MS.gene059402:CDS |
| TTTCCCCACTGATCCATGGG+CGG | 0.606049 | 6.3:-42576481 | MS.gene059402:CDS |
| CATGTGGAATGCAAAGAGAA+GGG | 0.628774 | 6.3:-42576381 | MS.gene059402:CDS |
| AACAAACAACCATATAACAA+CGG | 0.645913 | 6.3:+42576541 | None:intergenic |
| AATGCAAAGAGAAGGGACGT+GGG | 0.703464 | 6.3:-42576374 | MS.gene059402:CDS |
| TCAGCGACATCCCAAACGTG+CGG | 0.732788 | 6.3:-42576519 | MS.gene059402:CDS |
| CACCCGCCCATGGATCAGTG+GGG | 0.762537 | 6.3:+42576478 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AACAAACAACCATATAACAA+CGG | + | chr6.3:42576256-42576275 | None:intergenic | 25.0% |
| ACAAGATCTTTATATGATGC+AGG | + | chr6.3:42576356-42576375 | None:intergenic | 30.0% | |
| CACAAACCATAATCAACATT+AGG | + | chr6.3:42576470-42576489 | None:intergenic | 30.0% | |
| ! | CAAAAGTTAGTATTTTTCCC+AGG | + | chr6.3:42576386-42576405 | None:intergenic | 30.0% |
| AAAGATCTTGTGAAGATACC+TGG | - | chr6.3:42576365-42576384 | MS.gene059402:CDS | 35.0% | |
| AAGATCTTGTGAAGATACCT+GGG | - | chr6.3:42576366-42576385 | MS.gene059402:CDS | 35.0% | |
| CCATAATCAACATTAGGACT+AGG | + | chr6.3:42576464-42576483 | None:intergenic | 35.0% | |
| GATCTTTATATGATGCAGGT+TGG | + | chr6.3:42576352-42576371 | None:intergenic | 35.0% | |
| ! | AGCATCTTCAAGAAGTCTTT+TGG | + | chr6.3:42576551-42576570 | None:intergenic | 35.0% |
| ! | CCTAGTCCTAATGTTGATTA+TGG | - | chr6.3:42576461-42576480 | MS.gene059402:CDS | 35.0% |
| ! | GCATCTTCAAGAAGTCTTTT+GGG | + | chr6.3:42576550-42576569 | None:intergenic | 35.0% |
| ! | TAACTTTTGTCAGTCTCATG+TGG | - | chr6.3:42576397-42576416 | MS.gene059402:CDS | 35.0% |
| !!! | TTTTGGGACTGTAGATTTAG+AGG | + | chr6.3:42576534-42576553 | None:intergenic | 35.0% |
| AGAAGCAAGCCGTTGTTATA+TGG | - | chr6.3:42576244-42576263 | MS.gene059402:CDS | 40.0% | |
| ATCTTCTGCCTCAGATAAAG+AGG | + | chr6.3:42576498-42576517 | None:intergenic | 40.0% | |
| CATGTGGAATGCAAAGAGAA+GGG | - | chr6.3:42576413-42576432 | MS.gene059402:CDS | 40.0% | |
| CTTCTTGAAGATGCTTGAGA+TGG | - | chr6.3:42576556-42576575 | MS.gene059402:CDS | 40.0% | |
| TCATGTGGAATGCAAAGAGA+AGG | - | chr6.3:42576412-42576431 | MS.gene059402:CDS | 40.0% | |
| AATGCAAAGAGAAGGGACGT+GGG | - | chr6.3:42576420-42576439 | MS.gene059402:CDS | 45.0% | |
| GTGTGTTGCCTCTTTATCTG+AGG | - | chr6.3:42576487-42576506 | MS.gene059402:CDS | 45.0% | |
| TTGTTTCCCCACTGATCCAT+GGG | - | chr6.3:42576310-42576329 | MS.gene059402:CDS | 45.0% | |
| TTTGTTTCCCCACTGATCCA+TGG | - | chr6.3:42576309-42576328 | MS.gene059402:CDS | 45.0% | |
| ACAACCTTCACCGCACGTTT+GGG | + | chr6.3:42576288-42576307 | None:intergenic | 50.0% | |
| CAATCATATTCACCCGCCCA+TGG | + | chr6.3:42576329-42576348 | None:intergenic | 50.0% | |
| GAATGCAAAGAGAAGGGACG+TGG | - | chr6.3:42576419-42576438 | MS.gene059402:CDS | 50.0% | |
| ACATCCCAAACGTGCGGTGA+AGG | - | chr6.3:42576281-42576300 | MS.gene059402:CDS | 55.0% | |
| CACAACCTTCACCGCACGTT+TGG | + | chr6.3:42576289-42576308 | None:intergenic | 55.0% | |
| TCAGCGACATCCCAAACGTG+CGG | - | chr6.3:42576275-42576294 | MS.gene059402:CDS | 55.0% | |
| TTTCCCCACTGATCCATGGG+CGG | - | chr6.3:42576313-42576332 | MS.gene059402:CDS | 55.0% | |
| TCACCCGCCCATGGATCAGT+GGG | + | chr6.3:42576320-42576339 | None:intergenic | 60.0% | |
| TTCACCCGCCCATGGATCAG+TGG | + | chr6.3:42576321-42576340 | None:intergenic | 60.0% | |
| TTCCCCACTGATCCATGGGC+GGG | - | chr6.3:42576314-42576333 | MS.gene059402:CDS | 60.0% | |
| CACCCGCCCATGGATCAGTG+GGG | + | chr6.3:42576319-42576338 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 42576233 | 42576583 | 42576233 | ID=MS.gene059402 |
| chr6.3 | mRNA | 42576233 | 42576583 | 42576233 | ID=MS.gene059402.t1;Parent=MS.gene059402 |
| chr6.3 | exon | 42576233 | 42576583 | 42576233 | ID=MS.gene059402.t1.exon1;Parent=MS.gene059402.t1 |
| chr6.3 | CDS | 42576233 | 42576583 | 42576233 | ID=cds.MS.gene059402.t1;Parent=MS.gene059402.t1 |
| Gene Sequence |
| Protein sequence |
