AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62870.t1 MTR_4g101650 98.475 590 9 0 1 590 1 590 0.0 1202
MS.gene62870.t1 MTR_3g008580 66.954 581 192 0 6 586 8 588 0.0 815
MS.gene62870.t1 MTR_7g051440 67.135 569 181 4 24 589 26 591 0.0 775
MS.gene62870.t1 MTR_3g115050 52.514 537 234 7 16 551 19 535 0.0 552
MS.gene62870.t1 MTR_4g049390 51.776 535 237 6 18 551 18 532 0.0 544
MS.gene62870.t1 MTR_4g048350 51.589 535 237 7 18 551 18 531 0.0 536
MS.gene62870.t1 MTR_1g026410 51.273 550 244 7 6 551 5 534 0.0 535
MS.gene62870.t1 MTR_8g479380 48.746 558 257 9 4 557 7 539 0.0 524
MS.gene62870.t1 MTR_2g088080 51.963 535 236 6 18 551 21 535 0.0 523
MS.gene62870.t1 MTR_5g018270 50.749 534 240 7 18 551 22 532 3.22e-179 517
MS.gene62870.t1 MTR_4g075690 49.355 543 250 8 10 551 16 534 4.49e-179 517
MS.gene62870.t1 MTR_8g479390 49.064 534 244 8 22 551 26 535 3.51e-177 512
MS.gene62870.t1 MTR_4g132320 48.168 546 261 7 8 551 11 536 1.20e-171 498
MS.gene62870.t1 MTR_1g090707 47.619 546 271 9 10 553 8 540 1.09e-170 498
MS.gene62870.t1 MTR_4g083190 47.509 562 275 8 1 558 1 546 1.18e-170 496
MS.gene62870.t1 MTR_4g083210 45.273 550 277 7 13 558 11 540 4.37e-161 471
MS.gene62870.t1 MTR_2g088080 51.688 474 208 6 79 551 1 454 5.07e-160 466
MS.gene62870.t1 MTR_3g083450 45.772 544 269 7 22 558 21 545 2.07e-158 465
MS.gene62870.t1 MTR_3g083440 45.161 558 274 10 13 558 7 544 3.79e-157 461
MS.gene62870.t1 MTR_3g083390 44.704 557 278 8 13 558 7 544 7.34e-157 461
MS.gene62870.t1 MTR_3g083400 44.982 558 275 10 13 558 7 544 6.42e-156 458
MS.gene62870.t1 MTR_3g083430 44.524 557 279 8 13 558 7 544 1.80e-155 457
MS.gene62870.t1 MTR_3g083410 44.894 519 258 9 48 558 10 508 7.34e-145 429
MS.gene62870.t1 MTR_4g075690 49.342 456 206 8 10 464 16 447 4.35e-144 424
MS.gene62870.t1 MTR_5g020600 29.474 570 356 18 9 549 14 566 4.97e-62 215
MS.gene62870.t1 MTR_5g020620 29.534 579 360 19 1 549 1 561 4.80e-60 209
MS.gene62870.t1 MTR_3g078740 28.930 598 350 21 8 550 8 585 3.98e-57 202
MS.gene62870.t1 MTR_7g062250 29.101 567 332 19 29 549 36 578 2.35e-54 194
MS.gene62870.t1 MTR_7g060460 28.670 579 367 18 6 549 14 581 3.82e-53 191
MS.gene62870.t1 MTR_8g027375 28.599 521 335 14 29 522 36 546 2.62e-52 188
MS.gene62870.t1 MTR_7g058690 27.931 580 369 20 6 549 14 580 3.51e-52 188
MS.gene62870.t1 MTR_5g069680 28.371 571 361 19 7 549 8 558 1.60e-51 186
MS.gene62870.t1 MTR_4g064530 27.788 547 334 13 8 514 25 550 2.12e-51 186
MS.gene62870.t1 MTR_7g458880 27.336 578 375 18 6 549 14 580 7.18e-50 182
MS.gene62870.t1 MTR_4g015120 26.703 543 365 15 29 549 26 557 8.85e-50 181
MS.gene62870.t1 MTR_4g064530 27.778 540 329 13 8 507 25 543 1.44e-49 181
MS.gene62870.t1 MTR_3g462760 28.159 554 351 20 24 549 22 556 7.64e-49 179
MS.gene62870.t1 MTR_8g091390 29.371 572 341 19 17 551 24 569 1.59e-48 178
MS.gene62870.t1 MTR_3g078700 26.724 580 340 21 6 550 7 536 4.07e-47 173
MS.gene62870.t1 MTR_5g073210 27.417 569 371 17 10 549 5 560 2.52e-46 172
MS.gene62870.t1 MTR_4g133150 43.172 227 91 7 131 355 21 211 9.90e-45 158
MS.gene62870.t1 MTR_5g081810 27.068 532 342 19 45 549 17 529 9.02e-44 164
MS.gene62870.t1 MTR_7g065970 28.223 574 340 19 6 531 3 552 1.22e-43 164
MS.gene62870.t1 MTR_5g083360 28.166 529 335 16 14 509 11 527 4.17e-43 162
MS.gene62870.t1 MTR_7g062310 26.763 553 365 17 29 549 49 593 1.26e-42 162
MS.gene62870.t1 MTR_3g078730 27.419 558 320 20 29 550 27 535 2.25e-42 160
MS.gene62870.t1 MTR_2g008330 25.739 575 384 17 6 549 17 579 7.50e-42 159
MS.gene62870.t1 MTR_3g071890 27.941 544 349 17 9 522 13 543 1.70e-41 158
MS.gene62870.t1 MTR_4g019225 26.476 559 363 12 27 549 26 572 4.19e-41 157
MS.gene62870.t1 MTR_7g065980 28.796 573 358 20 15 549 11 571 4.93e-41 157
MS.gene62870.t1 MTR_3g101635 27.306 553 363 16 13 538 15 555 7.99e-41 156
MS.gene62870.t1 MTR_3g101640 27.032 566 368 14 6 538 7 560 9.75e-40 153
MS.gene62870.t1 MTR_5g018290 52.459 61 29 0 491 551 5 65 2.10e-15 71.6
MS.gene62870.t1 MTR_4g133160 31.429 105 58 2 431 535 1 91 2.94e-13 66.2
MS.gene62870.t1 MTR_5g081790 26.543 162 107 4 15 165 9 169 2.35e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62870.t1 AT4G12420 79.359 562 115 1 6 566 3 564 0.0 946
MS.gene62870.t1 AT4G12420 79.359 562 115 1 6 566 3 564 0.0 946
MS.gene62870.t1 AT5G51480 65.165 577 198 3 15 589 16 591 0.0 794
MS.gene62870.t1 AT4G25240 66.018 565 191 1 3 567 5 568 0.0 777
MS.gene62870.t1 AT4G25240 66.018 565 191 1 3 567 5 568 0.0 777
MS.gene62870.t1 AT5G48450 62.410 556 198 4 5 559 7 552 0.0 720
MS.gene62870.t1 AT5G48450 62.410 556 198 4 5 559 7 552 0.0 720
MS.gene62870.t1 AT1G76160 49.281 556 253 8 1 551 1 532 0.0 530
MS.gene62870.t1 AT1G21850 49.081 544 254 6 9 551 11 532 0.0 525
MS.gene62870.t1 AT4G22010 50.000 548 249 8 11 553 7 534 3.00e-180 520
MS.gene62870.t1 AT1G41830 48.816 549 256 7 6 553 11 535 3.77e-180 520
MS.gene62870.t1 AT1G21860 48.346 544 258 6 9 551 11 532 6.46e-180 519
MS.gene62870.t1 AT4G38420 49.724 543 246 9 16 551 19 541 9.36e-175 506
MS.gene62870.t1 AT1G55570 47.417 542 264 7 17 553 19 544 3.01e-173 503
MS.gene62870.t1 AT3G13390 48.059 541 260 7 23 558 24 548 4.81e-171 497
MS.gene62870.t1 AT4G28090 49.074 540 250 10 16 551 18 536 1.72e-168 490
MS.gene62870.t1 AT5G66920 46.629 534 256 8 22 551 32 540 8.59e-168 489
MS.gene62870.t1 AT4G37160 48.820 551 254 10 8 553 11 538 6.81e-167 486
MS.gene62870.t1 AT1G55560 45.714 560 278 9 6 558 5 545 9.08e-167 486
MS.gene62870.t1 AT3G13400 45.648 563 284 9 1 558 1 546 7.55e-166 484
MS.gene62870.t1 AT3G13400 45.648 563 284 9 1 558 1 546 7.55e-166 484
MS.gene62870.t1 AT1G75790 45.073 548 273 10 16 553 16 545 2.98e-159 467
MS.gene62870.t1 AT2G23630 47.940 534 256 7 22 554 30 542 2.47e-158 464
MS.gene62870.t1 AT2G23630 47.940 534 256 7 22 554 25 537 3.31e-158 464
MS.gene62870.t1 AT4G38420 49.068 483 219 9 16 491 19 481 6.39e-149 439
MS.gene62870.t1 AT4G38420 49.123 456 205 9 16 464 19 454 1.09e-138 411
MS.gene62870.t1 AT4G37160 49.134 462 207 10 8 464 11 449 1.24e-137 408
MS.gene62870.t1 AT5G21105 28.916 581 351 19 8 550 20 576 5.10e-58 204
MS.gene62870.t1 AT5G21100 28.322 572 346 18 18 550 15 561 1.32e-55 197
MS.gene62870.t1 AT5G21105 28.810 538 326 17 8 507 20 538 4.47e-54 192
MS.gene62870.t1 AT4G39830 27.087 587 371 17 6 553 13 581 1.47e-53 192
MS.gene62870.t1 AT2G30210 28.229 542 348 16 6 518 9 538 1.72e-51 186
MS.gene62870.t1 AT1G18140 28.998 569 338 21 29 549 31 581 1.34e-50 184
MS.gene62870.t1 AT5G58910 27.257 576 367 19 6 549 12 567 7.46e-50 182
MS.gene62870.t1 AT2G46570 28.442 552 348 17 29 549 34 569 5.69e-49 179
MS.gene62870.t1 AT5G60020 27.857 560 356 16 29 549 27 577 1.45e-48 178
MS.gene62870.t1 AT5G58910 27.431 576 365 20 6 549 12 566 1.99e-48 177
MS.gene62870.t1 AT5G48100 26.394 538 362 10 1 514 1 528 2.16e-48 177
MS.gene62870.t1 AT5G09360 29.049 568 354 20 6 544 18 565 5.47e-48 176
MS.gene62870.t1 AT5G60020 28.125 544 343 16 45 549 11 545 1.19e-47 175
MS.gene62870.t1 AT2G29130 26.950 564 347 16 29 549 32 573 1.86e-47 175
MS.gene62870.t1 AT5G03260 26.795 571 373 16 6 549 5 557 7.28e-46 170
MS.gene62870.t1 AT5G60020 27.938 519 330 14 29 510 27 538 2.40e-45 169
MS.gene62870.t1 AT2G38080 25.342 584 375 18 1 549 1 558 3.78e-45 168
MS.gene62870.t1 AT5G01190 26.667 570 375 18 9 549 3 558 6.77e-45 167
MS.gene62870.t1 AT5G05390 26.945 527 344 15 13 509 10 525 8.68e-45 167
MS.gene62870.t1 AT3G09220 26.908 524 347 14 14 509 12 527 6.93e-43 162
MS.gene62870.t1 AT5G07130 27.133 586 362 19 8 558 7 562 1.16e-42 161
MS.gene62870.t1 AT5G01190 26.894 528 347 17 47 549 31 544 1.68e-42 160
MS.gene62870.t1 AT5G01040 28.157 586 360 20 6 551 4 568 1.90e-42 161
MS.gene62870.t1 AT5G58910 27.002 537 336 19 45 549 11 523 2.77e-42 160
MS.gene62870.t1 AT5G01050 27.598 587 347 19 13 551 14 570 3.74e-42 160
MS.gene62870.t1 AT4G39830 26.358 497 312 15 93 553 6 484 4.41e-38 147
MS.gene62870.t1 AT2G40370 25.801 562 359 17 6 522 7 555 4.90e-38 148
MS.gene62870.t1 AT4G39830 26.358 497 312 15 93 553 8 486 5.06e-38 147
MS.gene62870.t1 AT2G46570 28.024 496 310 17 85 549 5 484 4.01e-36 141
MS.gene62870.t1 AT4G39830 25.553 497 303 14 93 553 8 473 1.15e-33 134
MS.gene62870.t1 AT5G21105 27.919 394 229 13 191 550 13 385 4.33e-32 128
MS.gene62870.t1 AT3G09220 25.688 436 290 12 100 509 3 430 9.72e-28 117
MS.gene62870.t1 AT5G07130 26.389 504 308 18 90 558 2 477 3.69e-27 115
MS.gene62870.t1 AT5G07130 26.389 504 308 18 90 558 2 477 3.69e-27 115

Find 135 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGAAGTCTGCCACATTTA+AGG 0.121560 8.1:+22043066 None:intergenic
TGGAAGCTTTAGAGGATTTA+TGG 0.153986 8.1:-22043898 MS.gene62870:CDS
TATCAACAAGTCTGAATTTC+AGG 0.211179 8.1:-22044744 MS.gene62870:CDS
CTGAAAGATCCTTGTGGATT+TGG 0.240958 8.1:+22044140 None:intergenic
CAAAGAGCAGCTGGTGGATT+TGG 0.248226 8.1:-22045639 MS.gene62870:CDS
TGTTCAAAATCGATGTTATC+AGG 0.265298 8.1:+22045308 None:intergenic
TGCTGACCATTACAAATTAA+AGG 0.265825 8.1:-22043991 MS.gene62870:CDS
TGGTAAGTCCAGTTCCATTT+TGG 0.301426 8.1:+22045717 None:intergenic
TGGAGCATGGACAGCAGTTT+TGG 0.302215 8.1:-22043225 MS.gene62870:CDS
CCACAAGGATCTTTCAGATA+TGG 0.317042 8.1:-22044134 MS.gene62870:CDS
GTAATCAATGGAAGCTTTAG+AGG 0.317693 8.1:-22043906 MS.gene62870:CDS
TACATCACTGCTTCTCCTCT+TGG 0.321669 8.1:-22046387 MS.gene62870:CDS
GTATGAAACCTCAAAATCAT+AGG 0.321799 8.1:+22046407 None:intergenic
TCATGGCAAGATGGTGTTCT+TGG 0.331310 8.1:-22045759 MS.gene62870:CDS
TCACGTTGGCAACGAGTTAC+TGG 0.341690 8.1:-22044550 MS.gene62870:CDS
CCCTCGACAATGTTGGAGTT+TGG 0.344346 8.1:-22043199 MS.gene62870:CDS
AAAACAACAATGTCCCCTTC+TGG 0.354030 8.1:+22045567 None:intergenic
ACCCGAGGAGGTCCGGTTAG+AGG 0.356788 8.1:+22043939 None:intergenic
CACAGCAACATTGTTGTTTG+TGG 0.367710 8.1:+22046090 None:intergenic
CTGAAGTCTGCCACATTTAA+GGG 0.371433 8.1:+22043067 None:intergenic
AGTGTGTCATTATATCTATA+AGG 0.373217 8.1:+22045335 None:intergenic
ATCAAAAGGAACAGAAATTA+CGG 0.373360 8.1:+22045593 None:intergenic
CCGTCTGTTTAGGTTTATCC+TGG 0.379057 8.1:-22043245 MS.gene62870:intron
AACCTTGATTCATGGTATCT+TGG 0.379868 8.1:-22043161 MS.gene62870:CDS
GAACAGAAAACCTTGATTCA+TGG 0.383673 8.1:-22043169 MS.gene62870:CDS
ATTGTCCTATTCCACCAAAA+TGG 0.389757 8.1:-22045731 MS.gene62870:CDS
CCAATCCTGCCACTCCAATC+AGG 0.392379 8.1:-22044016 MS.gene62870:CDS
GCTGACCATTACAAATTAAA+GGG 0.394425 8.1:-22043990 MS.gene62870:CDS
TCCTCTTGGAGTACCCCAAC+AGG 0.398295 8.1:-22046373 MS.gene62870:intron
GCTATCAACAAACAGTTTCC+AGG 0.410149 8.1:-22046130 MS.gene62870:CDS
GTAAATCTCTGTCACGTTGA+TGG 0.410681 8.1:+22044109 None:intergenic
GCCTCTAACCGGACCTCCTC+GGG 0.410839 8.1:-22043940 MS.gene62870:CDS
TCTGATCCTTCACTTGAAAC+TGG 0.411595 8.1:+22045697 None:intergenic
CTGCTTCAATCAACGGGAAT+GGG 0.420025 8.1:-22042921 MS.gene62870:CDS
CCAGATGGTGTTCTCATCAA+TGG 0.420137 8.1:-22045365 MS.gene62870:CDS
TAATGGTCAGCAAGCCTGAT+TGG 0.424218 8.1:+22044002 None:intergenic
TGTGAATGTCCACAACAAAT+TGG 0.425756 8.1:-22046071 MS.gene62870:CDS
CTAGATGATGGAAAAGATCT+TGG 0.426155 8.1:-22045392 MS.gene62870:CDS
ATGAAAACCTCCTCATTCAT+TGG 0.431957 8.1:-22046048 MS.gene62870:intron
CTATTCCACCAAAATGGAAC+TGG 0.434841 8.1:-22045725 MS.gene62870:CDS
ATACTCCCTTTAATTTGTAA+TGG 0.435490 8.1:+22043985 None:intergenic
TTCAGCAAAGGAGGAGTTCA+TGG 0.435896 8.1:-22045776 MS.gene62870:CDS
TTTCATCTGCTTCAATCAAC+GGG 0.436558 8.1:-22042927 MS.gene62870:CDS
CCACATTTAAGGGCATTGTC+TGG 0.445078 8.1:+22043077 None:intergenic
TGAACCAAGCAAGATCTATC+AGG 0.449999 8.1:-22044435 MS.gene62870:intron
CCTGATTGGAGTGGCAGGAT+TGG 0.450544 8.1:+22044016 None:intergenic
GCAGGATGGACTTCGGAGAT+TGG 0.461973 8.1:-22043718 MS.gene62870:intron
GTGTGTCATTATATCTATAA+GGG 0.466183 8.1:+22045336 None:intergenic
TTGGTCAAGAAACATACATC+AGG 0.467887 8.1:-22043142 MS.gene62870:CDS
ATGCATACTTATCACTTGAA+TGG 0.471335 8.1:-22043846 MS.gene62870:CDS
TTTCCCACGAAGCCTCTAAC+CGG 0.473650 8.1:-22043951 MS.gene62870:CDS
ATTTCATCTGCTTCAATCAA+CGG 0.473734 8.1:-22042928 MS.gene62870:CDS
ATGACCTCTTGCTTTCCCCT+TGG 0.475068 8.1:+22044501 None:intergenic
GAGATTGGTCTGAGAATAGC+AGG 0.476348 8.1:-22043703 MS.gene62870:CDS
AGAGCAGCTGGTGGATTTGG+TGG 0.476861 8.1:-22045636 MS.gene62870:CDS
TCCCCTTCTGGAGTATCAAA+AGG 0.477011 8.1:+22045579 None:intergenic
AAGCGGAGAGCAACACTTAG+TGG 0.478625 8.1:-22044050 MS.gene62870:CDS
ACTACATCGTCGCAAGTGCC+AGG 0.483033 8.1:-22044585 MS.gene62870:CDS
TGTTTCTACCCGAGGAGGTC+CGG 0.488278 8.1:+22043932 None:intergenic
GAGACCTGATAGATCTTGCT+TGG 0.490869 8.1:+22044431 None:intergenic
CGACTTCGTGTACATAATGT+TGG 0.490869 8.1:-22044769 MS.gene62870:CDS
GACCAAGATACCATGAATCA+AGG 0.492744 8.1:+22043159 None:intergenic
TCTGCTTCAATCAACGGGAA+TGG 0.495180 8.1:-22042922 MS.gene62870:CDS
CAGATGGTGTTCTCATCAAT+GGG 0.495277 8.1:-22045364 MS.gene62870:CDS
TTGAGAAAAGCTCTAGATGA+TGG 0.500180 8.1:-22045404 MS.gene62870:CDS
AAAACTGCTGTCCATGCTCC+AGG 0.500206 8.1:+22043227 None:intergenic
AGCCTCTAACCGGACCTCCT+CGG 0.505850 8.1:-22043941 MS.gene62870:CDS
GCAAGCCTGATTGGAGTGGC+AGG 0.508141 8.1:+22044011 None:intergenic
CTTGCACTATTCAAATTCCA+AGG 0.508314 8.1:-22044518 MS.gene62870:CDS
TCAAAAGGAACAGAAATTAC+GGG 0.509813 8.1:+22045594 None:intergenic
GTAGAAACATCAGTAATCAA+TGG 0.512552 8.1:-22043918 MS.gene62870:CDS
CCATTGATGAGAACACCATC+TGG 0.514712 8.1:+22045365 None:intergenic
TTTCAAGTGAAGGATCAGAT+TGG 0.514777 8.1:-22045693 MS.gene62870:CDS
TTTAGGTTTATCCTGGAGCA+TGG 0.523365 8.1:-22043238 MS.gene62870:intron
TTTGTGGTTACATTAATAGT+AGG 0.524783 8.1:+22046106 None:intergenic
GCTGAAGTTGTTATTCACTT+TGG 0.525996 8.1:-22042899 MS.gene62870:CDS
TGAACTTGCATTCTGATCCA+TGG 0.528156 8.1:+22044612 None:intergenic
TTGCACTATTCAAATTCCAA+GGG 0.541633 8.1:-22044517 MS.gene62870:CDS
TCTCTGCTAGAAGTAAGTTA+TGG 0.541722 8.1:+22044713 None:intergenic
GAACAAATTGATGTCAAACC+AGG 0.544999 8.1:-22045290 MS.gene62870:intron
TTGGTCTCCCTCGACAATGT+TGG 0.545883 8.1:-22043206 MS.gene62870:CDS
ATACATCAGGGTTGTCAACC+CGG 0.551620 8.1:-22043129 MS.gene62870:CDS
TTGATGAGAAAGAAGAAGAG+AGG 0.551843 8.1:+22046477 None:intergenic
TGGCAACGAGTTACTGGAGT+TGG 0.551919 8.1:-22044544 MS.gene62870:CDS
GCTCTTTGAAAATTAAGTGA+AGG 0.552773 8.1:+22045654 None:intergenic
CAGTGAAAATCGATGGGAAG+CGG 0.553222 8.1:-22044067 MS.gene62870:CDS
TATGAAACCTCAAAATCATA+GGG 0.554546 8.1:+22046408 None:intergenic
AGCAAGAGGTCATTTACCAC+CGG 0.555237 8.1:-22044491 MS.gene62870:CDS
ACTAGCTTAGATATTCATGT+TGG 0.562613 8.1:-22044658 MS.gene62870:CDS
AAGCCACCAGTGAAAATCGA+TGG 0.564943 8.1:-22044074 MS.gene62870:CDS
CAAGTGATAAGTATGCATCT+TGG 0.565246 8.1:+22043851 None:intergenic
TTAAGGGCATTGTCTGGCAT+CGG 0.569023 8.1:+22043083 None:intergenic
ATTGACTGCAGGATGGACTT+CGG 0.572724 8.1:-22043725 MS.gene62870:intron
AGGAGGAGTTCATGGCAAGA+TGG 0.573398 8.1:-22045768 MS.gene62870:CDS
GACTTACCAGTTTCAAGTGA+AGG 0.574483 8.1:-22045703 MS.gene62870:CDS
CAGCTGAAGAGAGTGTAAGA+AGG 0.584437 8.1:+22046445 None:intergenic
AAACAACCTACCAATGAATG+AGG 0.588957 8.1:+22046038 None:intergenic
ACGTGATTCATTCACAAACC+TGG 0.590454 8.1:+22044567 None:intergenic
AGCCACCAGTGAAAATCGAT+GGG 0.592950 8.1:-22044073 MS.gene62870:CDS
GGTGTTCTCATCAATGGGAA+AGG 0.593689 8.1:-22045359 MS.gene62870:CDS
CCAGACAATGCCCTTAAATG+TGG 0.594808 8.1:-22043077 MS.gene62870:CDS
ATTACTGATGTTTCTACCCG+AGG 0.595120 8.1:+22043924 None:intergenic
GCAGGGGTACATATAACAAG+TGG 0.596349 8.1:-22043685 MS.gene62870:CDS
GGTACATATAACAAGTGGGA+TGG 0.596737 8.1:-22043680 MS.gene62870:CDS
TGGTGGTTGAAATAGGTCTG+GGG 0.600438 8.1:-22045799 MS.gene62870:intron
AGGTCCGGTTAGAGGCTTCG+TGG 0.602265 8.1:+22043947 None:intergenic
GGTCCGGTTAGAGGCTTCGT+GGG 0.612012 8.1:+22043948 None:intergenic
ATAGGTCTGGGGTTCAGCAA+AGG 0.613231 8.1:-22045788 MS.gene62870:intron
AATAGCTCGTACTACAGCGC+AGG 0.617032 8.1:-22043657 MS.gene62870:intron
TCAAATTGATCATCTGGACC+CGG 0.617343 8.1:+22044472 None:intergenic
ACCTGTTGGGGTACTCCAAG+AGG 0.618129 8.1:+22046372 None:intergenic
TCCAAACTCCAACATTGTCG+AGG 0.619426 8.1:+22043198 None:intergenic
GGTCTGGGGTTCAGCAAAGG+AGG 0.623918 8.1:-22045785 MS.gene62870:CDS
AATTCCAAGGGGAAAGCAAG+AGG 0.626773 8.1:-22044505 MS.gene62870:CDS
GTCAGCAAGCCTGATTGGAG+TGG 0.632584 8.1:+22044007 None:intergenic
AAAGATCTTGGCATGCCAGA+TGG 0.635567 8.1:-22045380 MS.gene62870:CDS
GCAAGAGGTCATTTACCACC+GGG 0.637101 8.1:-22044490 MS.gene62870:CDS
CCAAACTCCAACATTGTCGA+GGG 0.637486 8.1:+22043199 None:intergenic
TTACTTCTAGCAGAGACTGA+AGG 0.644138 8.1:-22044706 MS.gene62870:CDS
TTGGTACACACGCAATCACA+CGG 0.648845 8.1:-22045535 MS.gene62870:intron
TGCACTATTCAAATTCCAAG+GGG 0.648906 8.1:-22044516 MS.gene62870:CDS
CAGGGGTACATATAACAAGT+GGG 0.653422 8.1:-22043684 MS.gene62870:CDS
TGGTCAAGAAACATACATCA+GGG 0.655143 8.1:-22043141 MS.gene62870:CDS
CCATATCTGAAAGATCCTTG+TGG 0.657664 8.1:+22044134 None:intergenic
CAACCTACCAATGAATGAGG+AGG 0.666485 8.1:+22046041 None:intergenic
AGATGGAACGTATCAGCAAG+TGG 0.669963 8.1:-22044170 MS.gene62870:CDS
GTTACATTAATAGTAGGACC+TGG 0.670641 8.1:+22046112 None:intergenic
CAACATTATGTACACGAAGT+CGG 0.670671 8.1:+22044770 None:intergenic
AGATTGGTCTGAGAATAGCA+GGG 0.671526 8.1:-22043702 MS.gene62870:CDS
ACTGATGTTTCTACCCGAGG+AGG 0.675653 8.1:+22043927 None:intergenic
AAGGAACAGAAATTACGGGT+CGG 0.683854 8.1:+22045598 None:intergenic
GGTTTGTGAATGAATCACGT+TGG 0.686085 8.1:-22044564 MS.gene62870:CDS
GATTGGTCTGAGAATAGCAG+GGG 0.702170 8.1:-22043701 MS.gene62870:CDS
AATTGATCATCTGGACCCGG+TGG 0.710556 8.1:+22044475 None:intergenic
GGTGCTCGTCCAAATCCACA+AGG 0.734148 8.1:-22044149 MS.gene62870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTTTGTAATTAATGT+AGG - chr8.1:22043921-22043940 MS.gene62870:CDS 10.0%
!!! TTTTGTTTTTAAAAAATTGA+GGG - chr8.1:22045906-22045925 MS.gene62870:intron 10.0%
!! AATATATAATTCTATAGAAC+TGG + chr8.1:22044953-22044972 None:intergenic 15.0%
!!! AAGTTTATTTTTTTTATTGG+TGG - chr8.1:22043534-22043553 MS.gene62870:intron 15.0%
!!! GTTTTGTTTTTAAAAAATTG+AGG - chr8.1:22045905-22045924 MS.gene62870:intron 15.0%
!!! TTATTTTTCAAATACTGATA+TGG - chr8.1:22044134-22044153 MS.gene62870:CDS 15.0%
!!! TTTCTTTGATAATTTTTAAC+AGG - chr8.1:22044548-22044567 MS.gene62870:CDS 15.0%
!! AAACATTAGAAACATTAAAC+AGG + chr8.1:22044531-22044550 None:intergenic 20.0%
!! GTTATAGTTAAACTTGAAAA+GGG - chr8.1:22043115-22043134 MS.gene62870:CDS 20.0%
!! GTTATATAGAAAAGATGTAA+AGG - chr8.1:22043157-22043176 MS.gene62870:CDS 20.0%
!! GTTTAAAAAGTTGAAAACTT+TGG - chr8.1:22043493-22043512 MS.gene62870:intron 20.0%
!! TGGTTTATGAAAAAAAAAGA+AGG + chr8.1:22045818-22045837 None:intergenic 20.0%
!! TGTTATAGTTAAACTTGAAA+AGG - chr8.1:22043114-22043133 MS.gene62870:CDS 20.0%
!! TTACTGAAAAATGTTCATTA+TGG + chr8.1:22046492-22046511 None:intergenic 20.0%
!!! ATGTTTTTCATTGTTTATGT+AGG - chr8.1:22043192-22043211 MS.gene62870:CDS 20.0%
!!! GCTTTTAGTAAATTAAGATT+AGG - chr8.1:22044304-22044323 MS.gene62870:intron 20.0%
! AAAGTCAATGATGAAAATCA+AGG + chr8.1:22045884-22045903 None:intergenic 25.0%
! AATCTAATCTAACACAGAAT+CGG + chr8.1:22043880-22043899 None:intergenic 25.0%
! AATTATATAGTCTGCATTAG+TGG + chr8.1:22045115-22045134 None:intergenic 25.0%
! ACATAGTTAATATGTCAACA+CGG + chr8.1:22045065-22045084 None:intergenic 25.0%
! AGTAAACCAAATAGTTATGT+TGG + chr8.1:22046002-22046021 None:intergenic 25.0%
! ATCAAAAGGAACAGAAATTA+CGG + chr8.1:22043760-22043779 None:intergenic 25.0%
! CTTTATCCAACATAACTATT+TGG - chr8.1:22045993-22046012 MS.gene62870:intron 25.0%
! TAGTTGTGTATAAAACTTGT+AGG + chr8.1:22046072-22046091 None:intergenic 25.0%
! TATGAAACCTCAAAATCATA+GGG + chr8.1:22042945-22042964 None:intergenic 25.0%
! TATTACTTTGTAATCACACA+TGG + chr8.1:22044207-22044226 None:intergenic 25.0%
! TTTGTGGTTACATTAATAGT+AGG + chr8.1:22043247-22043266 None:intergenic 25.0%
!! AGTGTGTCATTATATCTATA+AGG + chr8.1:22044018-22044037 None:intergenic 25.0%
!! CTTCTTTCTCTTACTATTTT+TGG - chr8.1:22043005-22043024 MS.gene62870:intron 25.0%
!! GTGTGTCATTATATCTATAA+GGG + chr8.1:22044017-22044036 None:intergenic 25.0%
!! GTTTTATCAAATTGATCATC+TGG + chr8.1:22044887-22044906 None:intergenic 25.0%
!!! ATACTCCCTTTAATTTGTAA+TGG + chr8.1:22045368-22045387 None:intergenic 25.0%
!!! CATCAACTTTAGAATTCATT+AGG - chr8.1:22045033-22045052 MS.gene62870:intron 25.0%
!!! CTCTTACTATTTTTGGAAAT+GGG - chr8.1:22043012-22043031 MS.gene62870:intron 25.0%
!!! GATATGCATTTTTTGTTGTA+GGG - chr8.1:22045526-22045545 MS.gene62870:intron 25.0%
!!! GATGTAAATTTTCTTGTTTC+AGG - chr8.1:22046387-22046406 MS.gene62870:CDS 25.0%
!!! GCAGATGAAATAATTTTTTG+AGG + chr8.1:22046413-22046432 None:intergenic 25.0%
!!! TCTCTTACTATTTTTGGAAA+TGG - chr8.1:22043011-22043030 MS.gene62870:intron 25.0%
!!! TGATATGGATGTTTTTTGTT+TGG - chr8.1:22044149-22044168 MS.gene62870:CDS 25.0%
!!! TTGTTGTTTTTATTGGTGAT+TGG - chr8.1:22043796-22043815 MS.gene62870:intron 25.0%
!!! TTTTTATTGGTGGTTGAAAT+AGG - chr8.1:22043544-22043563 MS.gene62870:intron 25.0%
AGAAAGAAGAAAAACCTGTT+GGG + chr8.1:22042994-22043013 None:intergenic 30.0%
ATGCATACTTATCACTTGAA+TGG - chr8.1:22045504-22045523 MS.gene62870:intron 30.0%
ATGTTGTGTTTCTTAATGCA+TGG - chr8.1:22044344-22044363 MS.gene62870:intron 30.0%
ATTTCATCTGCTTCAATCAA+CGG - chr8.1:22046422-22046441 MS.gene62870:CDS 30.0%
CAGTTGGTCAAAAGAATTTA+TGG - chr8.1:22045950-22045969 MS.gene62870:intron 30.0%
GATTCTGTGTTAGATTAGAT+TGG - chr8.1:22043879-22043898 MS.gene62870:CDS 30.0%
GCTGACCATTACAAATTAAA+GGG - chr8.1:22045360-22045379 MS.gene62870:CDS 30.0%
GTAGAAACATCAGTAATCAA+TGG - chr8.1:22045432-22045451 MS.gene62870:intron 30.0%
GTATACAATTTCTCTAGACA+TGG - chr8.1:22044243-22044262 MS.gene62870:intron 30.0%
GTATGAAACCTCAAAATCAT+AGG + chr8.1:22042946-22042965 None:intergenic 30.0%
TAACTATTACGTATGAAGCA+TGG - chr8.1:22043380-22043399 MS.gene62870:intron 30.0%
TATCAACAAGTCTGAATTTC+AGG - chr8.1:22044606-22044625 MS.gene62870:CDS 30.0%
TCAAAAGGAACAGAAATTAC+GGG + chr8.1:22043759-22043778 None:intergenic 30.0%
TGCTGACCATTACAAATTAA+AGG - chr8.1:22045359-22045378 MS.gene62870:CDS 30.0%
TGTTCAAAATCGATGTTATC+AGG + chr8.1:22044045-22044064 None:intergenic 30.0%
TTATTAGACGTTATGAAGCA+CGG + chr8.1:22043465-22043484 None:intergenic 30.0%
TTCTATTTCAAGAAGTTACC+TGG + chr8.1:22044081-22044100 None:intergenic 30.0%
TTGCACTATTCAAATTCCAA+GGG - chr8.1:22044833-22044852 MS.gene62870:intron 30.0%
! ACTAGCTTAGATATTCATGT+TGG - chr8.1:22044692-22044711 MS.gene62870:CDS 30.0%
! ATTTGTTCCCTATGATTTTG+AGG - chr8.1:22042935-22042954 MS.gene62870:CDS 30.0%
! GCTCTTTGAAAATTAAGTGA+AGG + chr8.1:22043699-22043718 None:intergenic 30.0%
! TGGACAATCTTATTCTTTTC+TGG - chr8.1:22044712-22044731 MS.gene62870:CDS 30.0%
!! TGTTGTTTGAGTTGAGTTTA+TGG - chr8.1:22043847-22043866 MS.gene62870:CDS 30.0%
!! TTAAAAAATTGAGGGTACTG+AGG - chr8.1:22045914-22045933 MS.gene62870:intron 30.0%
!! TTATTCTTTTCTGGTAACCA+TGG - chr8.1:22044721-22044740 MS.gene62870:CDS 30.0%
!!! GGATATGCATTTTTTGTTGT+AGG - chr8.1:22045525-22045544 MS.gene62870:intron 30.0%
AAACAACCTACCAATGAATG+AGG + chr8.1:22043315-22043334 None:intergenic 35.0%
AAACGCTTGAATCATGAGTT+TGG + chr8.1:22045838-22045857 None:intergenic 35.0%
AACCTTGATTCATGGTATCT+TGG - chr8.1:22046189-22046208 MS.gene62870:intron 35.0%
AGTGTAACATCATGCAAGTA+AGG + chr8.1:22045564-22045583 None:intergenic 35.0%
ATGAAAACCTCCTCATTCAT+TGG - chr8.1:22043302-22043321 MS.gene62870:intron 35.0%
ATTGTCCTATTCCACCAAAA+TGG - chr8.1:22043619-22043638 MS.gene62870:intron 35.0%
CAACATTATGTACACGAAGT+CGG + chr8.1:22044583-22044602 None:intergenic 35.0%
CAAGTGATAAGTATGCATCT+TGG + chr8.1:22045502-22045521 None:intergenic 35.0%
CTACTGACAGATATTACTCA+AGG + chr8.1:22044423-22044442 None:intergenic 35.0%
CTTGCACTATTCAAATTCCA+AGG - chr8.1:22044832-22044851 MS.gene62870:intron 35.0%
GAAAGAAGAAAAACCTGTTG+GGG + chr8.1:22042993-22043012 None:intergenic 35.0%
GAACAAATTGATGTCAAACC+AGG - chr8.1:22044060-22044079 MS.gene62870:CDS 35.0%
GAACAGAAAACCTTGATTCA+TGG - chr8.1:22046181-22046200 MS.gene62870:intron 35.0%
GAGAAAGAAGAAAAACCTGT+TGG + chr8.1:22042995-22043014 None:intergenic 35.0%
GTATGTTAGAACAGTGAGTT+TGG - chr8.1:22044455-22044474 MS.gene62870:CDS 35.0%
GTTACATTAATAGTAGGACC+TGG + chr8.1:22043241-22043260 None:intergenic 35.0%
TCTCTGCTAGAAGTAAGTTA+TGG + chr8.1:22044640-22044659 None:intergenic 35.0%
TCTGTGGTTAATTGTGTAGA+TGG - chr8.1:22045163-22045182 MS.gene62870:intron 35.0%
TGCACTATTCAAATTCCAAG+GGG - chr8.1:22044834-22044853 MS.gene62870:intron 35.0%
TGGTCAAGAAACATACATCA+GGG - chr8.1:22046209-22046228 MS.gene62870:intron 35.0%
TGTCTCATTTACTTACGCTT+CGG - chr8.1:22044977-22044996 MS.gene62870:intron 35.0%
TGTGAATGTCCACAACAAAT+TGG - chr8.1:22043279-22043298 MS.gene62870:intron 35.0%
TTGATGAGAAAGAAGAAGAG+AGG + chr8.1:22042876-22042895 None:intergenic 35.0%
TTGGTCAAGAAACATACATC+AGG - chr8.1:22046208-22046227 MS.gene62870:intron 35.0%
TTTCATCTGCTTCAATCAAC+GGG - chr8.1:22046423-22046442 MS.gene62870:CDS 35.0%
! AGGATGAAATCTAGTTCAGT+TGG - chr8.1:22045934-22045953 MS.gene62870:intron 35.0%
! CTTAATTTTCAAAGAGCAGC+TGG - chr8.1:22043702-22043721 MS.gene62870:CDS 35.0%
! GCACTAAAAGTTTTCCTCTA+TGG - chr8.1:22044387-22044406 MS.gene62870:intron 35.0%
! GCTGAAGTTGTTATTCACTT+TGG - chr8.1:22046451-22046470 MS.gene62870:CDS 35.0%
! GTAATCAATGGAAGCTTTAG+AGG - chr8.1:22045444-22045463 MS.gene62870:intron 35.0%
! TTCCTTTTGATACTCCAGAA+GGG - chr8.1:22043769-22043788 MS.gene62870:intron 35.0%
! TTTCAAGTGAAGGATCAGAT+TGG - chr8.1:22043657-22043676 MS.gene62870:intron 35.0%
!! CACTCATTTTTGCAATTCTG+TGG - chr8.1:22045147-22045166 MS.gene62870:intron 35.0%
!! CTAGATGATGGAAAAGATCT+TGG - chr8.1:22043958-22043977 MS.gene62870:CDS 35.0%
!! TGGAAGCTTTAGAGGATTTA+TGG - chr8.1:22045452-22045471 MS.gene62870:intron 35.0%
!! TTGAGAAAAGCTCTAGATGA+TGG - chr8.1:22043946-22043965 MS.gene62870:CDS 35.0%
!!! GGGGACATTGTTGTTTTTAT+TGG - chr8.1:22043789-22043808 MS.gene62870:intron 35.0%
!!! GGTAACTCAGTTTTGTTAGT+AGG + chr8.1:22046249-22046268 None:intergenic 35.0%
!!! GGTTTTCATCCAATTTGTTG+TGG + chr8.1:22043291-22043310 None:intergenic 35.0%
AAAACAACAATGTCCCCTTC+TGG + chr8.1:22043786-22043805 None:intergenic 40.0%
AAACCTCCTCATTCATTGGT+AGG - chr8.1:22043306-22043325 MS.gene62870:intron 40.0%
AAGGAACAGAAATTACGGGT+CGG + chr8.1:22043755-22043774 None:intergenic 40.0%
AAGGCATATGAAGACCATAG+AGG + chr8.1:22044404-22044423 None:intergenic 40.0%
ACGTGATTCATTCACAAACC+TGG + chr8.1:22044786-22044805 None:intergenic 40.0%
AGTTTGGATAGATGTGAGCT+TGG - chr8.1:22044471-22044490 MS.gene62870:CDS 40.0%
ATAAACCTAAACAGACGGCA+AGG + chr8.1:22046103-22046122 None:intergenic 40.0%
CAGATGGTGTTCTCATCAAT+GGG - chr8.1:22043986-22044005 MS.gene62870:CDS 40.0%
CCACAAGGATCTTTCAGATA+TGG - chr8.1:22045216-22045235 MS.gene62870:intron 40.0%
CCAGGATAAACCTAAACAGA+CGG + chr8.1:22046108-22046127 None:intergenic 40.0%
CCATATCTGAAAGATCCTTG+TGG + chr8.1:22045219-22045238 None:intergenic 40.0%
CGACTTCGTGTACATAATGT+TGG - chr8.1:22044581-22044600 MS.gene62870:CDS 40.0%
CTATTCCACCAAAATGGAAC+TGG - chr8.1:22043625-22043644 MS.gene62870:intron 40.0%
CTGAAAGATCCTTGTGGATT+TGG + chr8.1:22045213-22045232 None:intergenic 40.0%
CTGAAGTCTGCCACATTTAA+GGG + chr8.1:22046286-22046305 None:intergenic 40.0%
GACCAAGATACCATGAATCA+AGG + chr8.1:22046194-22046213 None:intergenic 40.0%
GCTATCAACAAACAGTTTCC+AGG - chr8.1:22043220-22043239 MS.gene62870:CDS 40.0%
GGTACATATAACAAGTGGGA+TGG - chr8.1:22045670-22045689 MS.gene62870:CDS 40.0%
GGTTTGTGAATGAATCACGT+TGG - chr8.1:22044786-22044805 MS.gene62870:intron 40.0%
GTAAATCTCTGTCACGTTGA+TGG + chr8.1:22045244-22045263 None:intergenic 40.0%
TAAACCTAAACAGACGGCAA+GGG + chr8.1:22046102-22046121 None:intergenic 40.0%
TCAAATTGATCATCTGGACC+CGG + chr8.1:22044881-22044900 None:intergenic 40.0%
TCTGATCCTTCACTTGAAAC+TGG + chr8.1:22043656-22043675 None:intergenic 40.0%
TGAACCAAGCAAGATCTATC+AGG - chr8.1:22044915-22044934 MS.gene62870:intron 40.0%
TGAACTTGCATTCTGATCCA+TGG + chr8.1:22044741-22044760 None:intergenic 40.0%
TTACTTCTAGCAGAGACTGA+AGG - chr8.1:22044644-22044663 MS.gene62870:CDS 40.0%
! AAACTTGATCCATTGACTGC+AGG - chr8.1:22045614-22045633 MS.gene62870:CDS 40.0%
! AATTTTCAAAGAGCAGCTGG+TGG - chr8.1:22043705-22043724 MS.gene62870:CDS 40.0%
! ATTACTGATGTTTCTACCCG+AGG + chr8.1:22045429-22045448 None:intergenic 40.0%
! ATTGGTGGTTGAAATAGGTC+TGG - chr8.1:22043549-22043568 MS.gene62870:intron 40.0%
! CAGGGGTACATATAACAAGT+GGG - chr8.1:22045666-22045685 MS.gene62870:CDS 40.0%
! GACTTACCAGTTTCAAGTGA+AGG - chr8.1:22043647-22043666 MS.gene62870:intron 40.0%
! GTTCCTTTTGATACTCCAGA+AGG - chr8.1:22043768-22043787 MS.gene62870:intron 40.0%
! TAAGTCCAGTTCCATTTTGG+TGG + chr8.1:22043633-22043652 None:intergenic 40.0%
! TCCTTTTGATACTCCAGAAG+GGG - chr8.1:22043770-22043789 MS.gene62870:intron 40.0%
! TGGTAAGTCCAGTTCCATTT+TGG + chr8.1:22043636-22043655 None:intergenic 40.0%
! TTGGTGGTTGAAATAGGTCT+GGG - chr8.1:22043550-22043569 MS.gene62870:intron 40.0%
! TTTAGGTTTATCCTGGAGCA+TGG - chr8.1:22046112-22046131 MS.gene62870:CDS 40.0%
!! AGATTGGTCTGAGAATAGCA+GGG - chr8.1:22045648-22045667 MS.gene62870:CDS 40.0%
!! CACAGCAACATTGTTGTTTG+TGG + chr8.1:22043263-22043282 None:intergenic 40.0%
!! CAGTTCCATTTTGGTGGAAT+AGG + chr8.1:22043627-22043646 None:intergenic 40.0%
!!! CAAGTTTTGAGTGTTGCTGA+CGG + chr8.1:22045601-22045620 None:intergenic 40.0%
!!! TCAGTTTTGTTAGTAGGCTC+CGG + chr8.1:22046243-22046262 None:intergenic 40.0%
AAAGATCTTGGCATGCCAGA+TGG - chr8.1:22043970-22043989 MS.gene62870:CDS 45.0%
AAGCCACCAGTGAAAATCGA+TGG - chr8.1:22045276-22045295 MS.gene62870:intron 45.0%
AATTCCAAGGGGAAAGCAAG+AGG - chr8.1:22044845-22044864 MS.gene62870:intron 45.0%
AGATGGAACGTATCAGCAAG+TGG - chr8.1:22045180-22045199 MS.gene62870:intron 45.0%
AGCAAGAGGTCATTTACCAC+CGG - chr8.1:22044859-22044878 MS.gene62870:intron 45.0%
AGCCACCAGTGAAAATCGAT+GGG - chr8.1:22045277-22045296 MS.gene62870:intron 45.0%
ATACATCAGGGTTGTCAACC+CGG - chr8.1:22046221-22046240 MS.gene62870:intron 45.0%
CAACCTACCAATGAATGAGG+AGG + chr8.1:22043312-22043331 None:intergenic 45.0%
CAGTGAAAATCGATGGGAAG+CGG - chr8.1:22045283-22045302 MS.gene62870:intron 45.0%
CCAAACTCCAACATTGTCGA+GGG + chr8.1:22046154-22046173 None:intergenic 45.0%
CCAGACAATGCCCTTAAATG+TGG - chr8.1:22046273-22046292 MS.gene62870:intron 45.0%
CCAGATGGTGTTCTCATCAA+TGG - chr8.1:22043985-22044004 MS.gene62870:CDS 45.0%
CCATTGATGAGAACACCATC+TGG + chr8.1:22043988-22044007 None:intergenic 45.0%
CTGCTTCAATCAACGGGAAT+GGG - chr8.1:22046429-22046448 MS.gene62870:CDS 45.0%
GACGTTATGAAGCACGGATA+CGG + chr8.1:22043459-22043478 None:intergenic 45.0%
GAGACCTGATAGATCTTGCT+TGG + chr8.1:22044922-22044941 None:intergenic 45.0%
GCATGGACACTCCTCATATT+AGG - chr8.1:22043397-22043416 MS.gene62870:intron 45.0%
GCTGAAGTCTGCCACATTTA+AGG + chr8.1:22046287-22046306 None:intergenic 45.0%
GGTGTTCTCATCAATGGGAA+AGG - chr8.1:22043991-22044010 MS.gene62870:CDS 45.0%
TAATGGTCAGCAAGCCTGAT+TGG + chr8.1:22045351-22045370 None:intergenic 45.0%
TACATCACTGCTTCTCCTCT+TGG - chr8.1:22042963-22042982 MS.gene62870:intron 45.0%
TCATGGCAAGATGGTGTTCT+TGG - chr8.1:22043591-22043610 MS.gene62870:intron 45.0%
TCCAAACTCCAACATTGTCG+AGG + chr8.1:22046155-22046174 None:intergenic 45.0%
TCTGCTTCAATCAACGGGAA+TGG - chr8.1:22046428-22046447 MS.gene62870:CDS 45.0%
TGGTGGTTGAAATAGGTCTG+GGG - chr8.1:22043551-22043570 MS.gene62870:intron 45.0%
TTCAGCAAAGGAGGAGTTCA+TGG - chr8.1:22043574-22043593 MS.gene62870:intron 45.0%
TTGGTACACACGCAATCACA+CGG - chr8.1:22043815-22043834 MS.gene62870:intron 45.0%
! ATTGACTGCAGGATGGACTT+CGG - chr8.1:22045625-22045644 MS.gene62870:CDS 45.0%
! CAGCTGAAGAGAGTGTAAGA+AGG + chr8.1:22042908-22042927 None:intergenic 45.0%
! CCGTCTGTTTAGGTTTATCC+TGG - chr8.1:22046105-22046124 MS.gene62870:CDS 45.0%
! GCAGGGGTACATATAACAAG+TGG - chr8.1:22045665-22045684 MS.gene62870:CDS 45.0%
! TTGATCCATTGACTGCAGGA+TGG - chr8.1:22045618-22045637 MS.gene62870:CDS 45.0%
!! CCACATTTAAGGGCATTGTC+TGG + chr8.1:22046276-22046295 None:intergenic 45.0%
!! GAGATTGGTCTGAGAATAGC+AGG - chr8.1:22045647-22045666 MS.gene62870:CDS 45.0%
!! GATTGGTCTGAGAATAGCAG+GGG - chr8.1:22045649-22045668 MS.gene62870:CDS 45.0%
!! GCTCGCTTGTTGTAAAAGAG+CGG + chr8.1:22045793-22045812 None:intergenic 45.0%
!! TCCCCTTCTGGAGTATCAAA+AGG + chr8.1:22043774-22043793 None:intergenic 45.0%
!! TTAAGGGCATTGTCTGGCAT+CGG + chr8.1:22046270-22046289 None:intergenic 45.0%
!!! CAGTTTTGTTAGTAGGCTCC+GGG + chr8.1:22046242-22046261 None:intergenic 45.0%
!!! TTCCCATCGATTTTCACTGG+TGG + chr8.1:22045282-22045301 None:intergenic 45.0%
!!! TAAAAGTTTATTTTTTTTAT+TGG - chr8.1:22043531-22043550 MS.gene62870:intron 5.0%
AAAACTGCTGTCCATGCTCC+AGG + chr8.1:22046126-22046145 None:intergenic 50.0%
AAGCGGAGAGCAACACTTAG+TGG - chr8.1:22045300-22045319 MS.gene62870:CDS 50.0%
AATAGCTCGTACTACAGCGC+AGG - chr8.1:22045693-22045712 MS.gene62870:CDS 50.0%
AATTGATCATCTGGACCCGG+TGG + chr8.1:22044878-22044897 None:intergenic 50.0%
AGGAGGAGTTCATGGCAAGA+TGG - chr8.1:22043582-22043601 MS.gene62870:intron 50.0%
ATGAAGCACGGATACGGACA+CGG + chr8.1:22043453-22043472 None:intergenic 50.0%
ATGACCTCTTGCTTTCCCCT+TGG + chr8.1:22044852-22044871 None:intergenic 50.0%
CCCTCGACAATGTTGGAGTT+TGG - chr8.1:22046151-22046170 MS.gene62870:intron 50.0%
GAAGTCCATCCTGCAGTCAA+TGG + chr8.1:22045626-22045645 None:intergenic 50.0%
GATTCCCTTGCCGTCTGTTT+AGG - chr8.1:22046095-22046114 MS.gene62870:CDS 50.0%
GCAAGAGGTCATTTACCACC+GGG - chr8.1:22044860-22044879 MS.gene62870:intron 50.0%
TCACGTTGGCAACGAGTTAC+TGG - chr8.1:22044800-22044819 MS.gene62870:intron 50.0%
TCCTCATATTAGGCGTGTCC+CGG - chr8.1:22043407-22043426 MS.gene62870:intron 50.0%
TGGCAACGAGTTACTGGAGT+TGG - chr8.1:22044806-22044825 MS.gene62870:intron 50.0%
TTGGTCTCCCTCGACAATGT+TGG - chr8.1:22046144-22046163 MS.gene62870:intron 50.0%
TTTCCCACGAAGCCTCTAAC+CGG - chr8.1:22045399-22045418 MS.gene62870:CDS 50.0%
! ACTGATGTTTCTACCCGAGG+AGG + chr8.1:22045426-22045445 None:intergenic 50.0%
! ATAGGTCTGGGGTTCAGCAA+AGG - chr8.1:22043562-22043581 MS.gene62870:intron 50.0%
! TGGAGCATGGACAGCAGTTT+TGG - chr8.1:22046125-22046144 MS.gene62870:CDS 50.0%
!! CAAAGAGCAGCTGGTGGATT+TGG - chr8.1:22043711-22043730 MS.gene62870:CDS 50.0%
!!! CGCTTCCCATCGATTTTCAC+TGG + chr8.1:22045285-22045304 None:intergenic 50.0%
ACCGGGACACGCCTAATATG+AGG + chr8.1:22043411-22043430 None:intergenic 55.0%
ACTACATCGTCGCAAGTGCC+AGG - chr8.1:22044765-22044784 MS.gene62870:CDS 55.0%
CCAATCCTGCCACTCCAATC+AGG - chr8.1:22045334-22045353 MS.gene62870:CDS 55.0%
CCTGATTGGAGTGGCAGGAT+TGG + chr8.1:22045337-22045356 None:intergenic 55.0%
GGTGCTCGTCCAAATCCACA+AGG - chr8.1:22045201-22045220 MS.gene62870:intron 55.0%
GTCAGCAAGCCTGATTGGAG+TGG + chr8.1:22045346-22045365 None:intergenic 55.0%
TATTAGGCGTGTCCCGGTGT+CGG - chr8.1:22043413-22043432 MS.gene62870:intron 55.0%
! ACCTGTTGGGGTACTCCAAG+AGG + chr8.1:22042981-22043000 None:intergenic 55.0%
! GCAGGATGGACTTCGGAGAT+TGG - chr8.1:22045632-22045651 MS.gene62870:CDS 55.0%
! TCCTCTTGGAGTACCCCAAC+AGG - chr8.1:22042977-22042996 MS.gene62870:intron 55.0%
! TGTTTCTACCCGAGGAGGTC+CGG + chr8.1:22045421-22045440 None:intergenic 55.0%
!! AGAGCAGCTGGTGGATTTGG+TGG - chr8.1:22043714-22043733 MS.gene62870:CDS 55.0%
ACTGACGTGTCTCCGACACC+GGG + chr8.1:22043428-22043447 None:intergenic 60.0%
AGCCTCTAACCGGACCTCCT+CGG - chr8.1:22045409-22045428 MS.gene62870:CDS 60.0%
AGGTCCGGTTAGAGGCTTCG+TGG + chr8.1:22045406-22045425 None:intergenic 60.0%
CACTGACGTGTCTCCGACAC+CGG + chr8.1:22043429-22043448 None:intergenic 60.0%
GCAAGCCTGATTGGAGTGGC+AGG + chr8.1:22045342-22045361 None:intergenic 60.0%
GGTCCGGTTAGAGGCTTCGT+GGG + chr8.1:22045405-22045424 None:intergenic 60.0%
! GGTCTGGGGTTCAGCAAAGG+AGG - chr8.1:22043565-22043584 MS.gene62870:intron 60.0%
ACCCGAGGAGGTCCGGTTAG+AGG + chr8.1:22045414-22045433 None:intergenic 65.0%
GCCTCTAACCGGACCTCCTC+GGG - chr8.1:22045410-22045429 MS.gene62870:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 22042861 22046511 22042861 ID=MS.gene62870
chr8.1 mRNA 22042861 22046511 22042861 ID=MS.gene62870.t1;Parent=MS.gene62870
chr8.1 exon 22046374 22046511 22046374 ID=MS.gene62870.t1.exon1;Parent=MS.gene62870.t1
chr8.1 CDS 22046374 22046511 22046374 ID=cds.MS.gene62870.t1;Parent=MS.gene62870.t1
chr8.1 exon 22046049 22046158 22046049 ID=MS.gene62870.t1.exon2;Parent=MS.gene62870.t1
chr8.1 CDS 22046049 22046158 22046049 ID=cds.MS.gene62870.t1;Parent=MS.gene62870.t1
chr8.1 exon 22045536 22045806 22045536 ID=MS.gene62870.t1.exon3;Parent=MS.gene62870.t1
chr8.1 CDS 22045536 22045806 22045536 ID=cds.MS.gene62870.t1;Parent=MS.gene62870.t1
chr8.1 exon 22045291 22045429 22045291 ID=MS.gene62870.t1.exon4;Parent=MS.gene62870.t1
chr8.1 CDS 22045291 22045429 22045291 ID=cds.MS.gene62870.t1;Parent=MS.gene62870.t1
chr8.1 exon 22044436 22044802 22044436 ID=MS.gene62870.t1.exon5;Parent=MS.gene62870.t1
chr8.1 CDS 22044436 22044802 22044436 ID=cds.MS.gene62870.t1;Parent=MS.gene62870.t1
chr8.1 exon 22043825 22044190 22043825 ID=MS.gene62870.t1.exon6;Parent=MS.gene62870.t1
chr8.1 CDS 22043825 22044190 22043825 ID=cds.MS.gene62870.t1;Parent=MS.gene62870.t1
chr8.1 exon 22043658 22043736 22043658 ID=MS.gene62870.t1.exon7;Parent=MS.gene62870.t1
chr8.1 CDS 22043658 22043736 22043658 ID=cds.MS.gene62870.t1;Parent=MS.gene62870.t1
chr8.1 exon 22043056 22043255 22043056 ID=MS.gene62870.t1.exon8;Parent=MS.gene62870.t1
chr8.1 CDS 22043056 22043255 22043056 ID=cds.MS.gene62870.t1;Parent=MS.gene62870.t1
chr8.1 exon 22042861 22042963 22042861 ID=MS.gene62870.t1.exon9;Parent=MS.gene62870.t1
chr8.1 CDS 22042861 22042963 22042861 ID=cds.MS.gene62870.t1;Parent=MS.gene62870.t1
Gene Sequence

>MS.gene62870

ATGGCTTCTTCACCTCTCTTCTTCTTTCTCATCAACATTTTCTTCCTTCTTACACTCTCTTCAGCTGAAGATGCATTTGTTCCCTATGATTTTGAGGTTTCATACATCACTGCTTCTCCTCTTGGAGTACCCCAACAGGTTTTTCTTCTTTCTCTTACTATTTTTGGAAATGGGTATGTTCACTTTTTTACTAACTCACTTTGAATTTACTAAAGTTTCAAACTTTACTTTCAGATCTACATCTAAATAGTAATGTTATAGTTAAACTTGAAAAGGGTTATTGTAAATGTGACTGAGTTATATAGAAAAGATGTAAAGGTTTTTTTTAGTAATGTTTTTCATTGTTTATGTAGGTAATTGCTATCAACAAACAGTTTCCAGGTCCTACTATTAATGTAACCACAAACAACAATGTTGCTGTGAATGTCCACAACAAATTGGATGAAAACCTCCTCATTCATTGGTAGGTTGTTTTGTTGTTGATTATTAGATGTAACTAGTGTAACTAACTGTTTTAACTAACTATTACGTATGAAGCATGGACACTCCTCATATTAGGCGTGTCCCGGTGTCGGAGACACGTCAGTGTCCGTGTCCGTATCCGTGCTTCATAACGTCTAATAACGATTTTTGTTTAAAAAGTTGAAAACTTTGGTTTTGTTAATTGAGCTAAAAGTTTATTTTTTTTATTGGTGGTTGAAATAGGTCTGGGGTTCAGCAAAGGAGGAGTTCATGGCAAGATGGTGTTCTTGGAACAAATTGTCCTATTCCACCAAAATGGAACTGGACTTACCAGTTTCAAGTGAAGGATCAGATTGGAAGTTTTTTCTACTTTCCTTCACTTAATTTTCAAAGAGCAGCTGGTGGATTTGGTGGTTTCATTATAAACAACCGACCCGTAATTTCTGTTCCTTTTGATACTCCAGAAGGGGACATTGTTGTTTTTATTGGTGATTGGTACACACGCAATCACACGGTTAGTTTTGTGTTGTTTGAGTTGAGTTTATGGAAAGTTTCCGATTCTGTGTTAGATTAGATTGGATGTTAGATGAGTTGATTAAAATTTTTTGTAATTAATGTAGGCTTTGAGAAAAGCTCTAGATGATGGAAAAGATCTTGGCATGCCAGATGGTGTTCTCATCAATGGGAAAGGCCCTTATAGATATAATGACACACTTGTTCCTGATAACATCGATTTTGAACAAATTGATGTCAAACCAGGTAACTTCTTGAAATAGAAACTTAACTTGAATTCTCTGATTTTTTTAGTTATTTATTTTTCAAATACTGATATGGATGTTTTTTGTTTGGTTTTATGATTAATAATAAATACAAGAGAAGTTCCATGTGTGATTACAAAGTAATAAATTTTAATGTCTCTTGTATACAATTTCTCTAGACATGGAAACACAATATCACTCACTAATGTATGATAGCTGTTTTGCTTTTAGTAAATTAAGATTAGGCACTCAAAGTTTCTCTAATGTTGTGTTTCTTAATGCATGGAAATAAAAACAGATTTGTAAGCACTAAAAGTTTTCCTCTATGGTCTTCATATGCCTTGAGTAATATCTGTCAGTAGAGTACAAAGTGTGTATGTTAGAACAGTGAGTTTGGATAGATGTGAGCTTGGTGTTATAACATTCTTCATTCTTGATAATGATTTACCTGTTTAATGTTTCTAATGTTTCTTTGATAATTTTTAACAGGAAAAACTTACCGACTTCGTGTACATAATGTTGGAATATCAACAAGTCTGAATTTCAGGATTCAGAACCATAACTTACTTCTAGCAGAGACTGAAGGCTCATATACAGTGCAACAGAACTACACTAGCTTAGATATTCATGTTGGACAATCTTATTCTTTTCTGGTAACCATGGATCAGAATGCAAGTTCAGATTACTACATCGTCGCAAGTGCCAGGTTTGTGAATGAATCACGTTGGCAACGAGTTACTGGAGTTGGTATCTTGCACTATTCAAATTCCAAGGGGAAAGCAAGAGGTCATTTACCACCGGGTCCAGATGATCAATTTGATAAAACTTTCTCAATGAACCAAGCAAGATCTATCAGGTCTCTTCATACTCCAGTTCTATAGAATTATATATTATCTTGTCTCATTTACTTACGCTTCGGTTTCGAGCAACTGTCTGAAATTTGTCAATAAGTCATCAACTTTAGAATTCATTAGGTCTCATCCGTGTTGACATATTAACTATGTTGTAATCAAACTTTATACTGTGAAGTTCCACTAATGCAGACTATATAATTGAAAAATATTAGCACTCATTTTTGCAATTCTGTGGTTAATTGTGTAGATGGAACGTATCAGCAAGTGGTGCTCGTCCAAATCCACAAGGATCTTTCAGATATGGTTCCATCAACGTGACAGAGATTTACGTATTGAAAAATAAGCCACCAGTGAAAATCGATGGGAAGCGGAGAGCAACACTTAGTGGAATTTCTTTTGCCAATCCTGCCACTCCAATCAGGCTTGCTGACCATTACAAATTAAAGGGAGTATACAAACTTGATTTTCCCACGAAGCCTCTAACCGGACCTCCTCGGGTAGAAACATCAGTAATCAATGGAAGCTTTAGAGGATTTATGGAAATTATACTGCAGAACAATGACACCAAGATGCATACTTATCACTTGAATGGATATGCATTTTTTGTTGTAGGGTAAGATTCTATTCCTTACTTGCATGATGTTACACTTTTACATGTTTTAGCCGTCAGCAACACTCAAAACTTGATCCATTGACTGCAGGATGGACTTCGGAGATTGGTCTGAGAATAGCAGGGGTACATATAACAAGTGGGATGGAATAGCTCGTACTACAGCGCAGGTATATTTTCTGTCTTAGAATGCATGTCGATCAAGCAAAGCTTTACTTGTTTTTAACAAGCTCGACATTCAAACTCCGCTCTTTTACAACAAGCGAGCAACCTTCTTTTTTTTTCATAAACCAAACTCATGATTCAAGCGTTTGACTTGACTCAACTCGTTTACATCCTTGATTTTCATCATTGACTTTTGTTTTGTTTTTAAAAAATTGAGGGTACTGAGGATGAAATCTAGTTCAGTTGGTCAAAAGAATTTATGGTGCTACATCAAAATGAATCACTTTATCCAACATAACTATTTGGTTTACTACATGTCTTTCATATGACTTTGTCATAACTGCTATTGCATCATGTATCCTACAAGTTTTATACACAACTATTTGATTCCCTTGCCGTCTGTTTAGGTTTATCCTGGAGCATGGACAGCAGTTTTGGTCTCCCTCGACAATGTTGGAGTTTGGAATCTAAGAACAGAAAACCTTGATTCATGGTATCTTGGTCAAGAAACATACATCAGGGTTGTCAACCCGGAGCCTACTAACAAAACTGAGTTACCGATGCCAGACAATGCCCTTAAATGTGGCAGACTTCAGCATTTGCAAAAGTATGTTACATTATCATTCTTCAGTATGTTAAATTAAAAGTATGTTACATAAAAAAAGTTGTTAAATTTTGATGTAAATTTTCTTGTTTCAGGCCTCAAAAAATTATTTCATCTGCTTCAATCAACGGGAATGGGCTGAAGTTGTTATTCACTTTGGTGATGTTTGTATGTGCCATAATGAACATTTTTCAGTAA
Protein sequence

>MS.gene62870.t1

MASSPLFFFLINIFFLLTLSSAEDAFVPYDFEVSYITASPLGVPQQVIAINKQFPGPTINVTTNNNVAVNVHNKLDENLLIHWSGVQQRRSSWQDGVLGTNCPIPPKWNWTYQFQVKDQIGSFFYFPSLNFQRAAGGFGGFIINNRPVISVPFDTPEGDIVVFIGDWYTRNHTALRKALDDGKDLGMPDGVLINGKGPYRYNDTLVPDNIDFEQIDVKPGKTYRLRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARFVNESRWQRVTGVGILHYSNSKGKARGHLPPGPDDQFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEIYVLKNKPPVKIDGKRRATLSGISFANPATPIRLADHYKLKGVYKLDFPTKPLTGPPRVETSVINGSFRGFMEIILQNNDTKMHTYHLNGYAFFVVGMDFGDWSENSRGTYNKWDGIARTTAQVYPGAWTAVLVSLDNVGVWNLRTENLDSWYLGQETYIRVVNPEPTNKTELPMPDNALKCGRLQHLQKPQKIISSASINGNGLKLLFTLVMFVCAIMNIFQ