AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62919

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62919.t1 MTR_0003s0660 96.798 406 13 0 1 406 1 406 0.0 806
MS.gene62919.t1 MTR_7g018290 95.989 349 14 0 47 395 1 349 0.0 691
MS.gene62919.t1 MTR_7g018310 90.380 395 17 1 1 395 1 374 0.0 690
MS.gene62919.t1 MTR_7g018320 83.905 379 11 2 17 395 17 345 0.0 629
MS.gene62919.t1 MTR_0076s0020 69.296 355 106 3 49 402 1 353 8.25e-178 499
MS.gene62919.t1 MTR_8g069905 64.672 351 122 2 47 396 1 350 5.28e-163 462
MS.gene62919.t1 MTR_2g020990 43.275 342 172 8 55 378 5 342 3.08e-81 253
MS.gene62919.t1 MTR_4g118320 41.056 341 177 7 55 377 5 339 7.14e-78 244
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62919.t1 AT3G02470 64.674 368 115 7 49 403 1 366 6.72e-164 464
MS.gene62919.t1 AT3G02470 64.674 368 115 7 49 403 1 366 6.72e-164 464
MS.gene62919.t1 AT3G02470 64.674 368 115 7 49 403 1 366 6.72e-164 464
MS.gene62919.t1 AT5G15950 64.365 362 124 4 49 405 1 362 8.35e-161 457
MS.gene62919.t1 AT5G15950 64.365 362 124 4 49 405 1 362 8.35e-161 457
MS.gene62919.t1 AT3G25570 65.330 349 117 3 49 393 1 349 6.79e-157 446
MS.gene62919.t1 AT3G25570 65.330 349 117 3 49 393 1 349 6.79e-157 446
MS.gene62919.t1 AT5G18930 42.773 339 177 7 55 377 5 342 2.80e-84 261
MS.gene62919.t1 AT3G17717 49.550 111 54 2 228 337 18 127 8.45e-30 112

Find 86 sgRNAs with CRISPR-Local

Find 120 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCACTCCAGCAACATTTC+AGG 0.206600 7.2:-79449650 None:intergenic
CGCGGAAGCTTCATCTTTCC+TGG 0.256495 7.2:+79448964 MS.gene62919:CDS
AATCTCGTCAATTTGGTCTT+TGG 0.259345 7.2:-79448737 None:intergenic
AAATTTCCTTTGGAGGTTAA+AGG 0.271383 7.2:+79449525 MS.gene62919:CDS
GCTGTTCTTGACAGCTATTT+TGG 0.280170 7.2:+79449027 MS.gene62919:CDS
AAGTCGCATATGTCAGATTT+TGG 0.281023 7.2:-79449276 None:intergenic
TTCTCTGACCCTGCTGGATT+AGG 0.287048 7.2:+79448700 MS.gene62919:CDS
GTTTCAGAATCTCGTCAATT+TGG 0.331728 7.2:-79448744 None:intergenic
GGTTTGATGACTAAGAATTC+TGG 0.333324 7.2:+79449237 MS.gene62919:CDS
GCATAGCTGAATCCATCTTC+AGG 0.343318 7.2:-79449369 None:intergenic
TGAGAACGAGGAGGAAGTTA+AGG 0.347960 7.2:+79449674 MS.gene62919:CDS
ATGCTGATAAGTCACAAATT+TGG 0.357352 7.2:+79449088 MS.gene62919:CDS
AAAACTTGACAAATTTCCTT+TGG 0.369192 7.2:+79449515 MS.gene62919:CDS
GAGAGGTGCTTCGTACAAAA+AGG 0.372510 7.2:-79448231 None:intergenic
ACTTCGAATTTGAACCTTGC+GGG 0.393253 7.2:+79449295 MS.gene62919:CDS
GCTTCACCGGAAGCTGTCTA+TGG 0.396357 7.2:+79449141 MS.gene62919:CDS
TCAAGGCCATAGACAGCTTC+CGG 0.398954 7.2:-79449147 None:intergenic
TCGGCAAGCTTAAGAATTGC+AGG 0.407592 7.2:-79448904 None:intergenic
CGTACCTTTGTTCGAAATGA+TGG 0.419044 7.2:+79449606 MS.gene62919:CDS
GGTCTACCCTGAAATGTTGC+TGG 0.420536 7.2:+79449643 MS.gene62919:CDS
AACCAGTCATGCACATTTCA+AGG 0.440811 7.2:-79449164 None:intergenic
ACTTGACAAATTTCCTTTGG+AGG 0.442578 7.2:+79449518 MS.gene62919:CDS
TGACTAAGAATTCTGGAATC+AGG 0.442912 7.2:+79449244 MS.gene62919:CDS
TACTCGATGAACGGAATTGA+AGG 0.451132 7.2:+79449318 MS.gene62919:CDS
TGAGGGAAGGATTGAGCTCC+AGG 0.451159 7.2:-79448982 None:intergenic
ATCCATGTCACCCCTGAAGA+TGG 0.462649 7.2:+79449357 MS.gene62919:CDS
GGCCTTGAAATGTGCATGAC+TGG 0.467615 7.2:+79449162 MS.gene62919:CDS
TTCAGGGGTGACATGGATAG+TGG 0.468582 7.2:-79449352 None:intergenic
GAAAGAATCAATGAAGTGCT+TGG 0.474283 7.2:+79449561 MS.gene62919:CDS
AAGACAGATGCATCTTCAGC+AGG 0.478706 7.2:+79449216 MS.gene62919:CDS
TTTGGTCTTTGGACAATGCT+CGG 0.490726 7.2:-79448726 None:intergenic
CTCACTCCAGCAACATTTCA+GGG 0.494047 7.2:-79449649 None:intergenic
TCAACAATGGTGCATTCTGC+TGG 0.497159 7.2:-79448766 None:intergenic
CATAGCTGAATCCATCTTCA+GGG 0.503323 7.2:-79449368 None:intergenic
TCTTAACATTGCTGTGAAAT+CGG 0.512952 7.2:+79448930 MS.gene62919:CDS
AAGCAATTTCGTAGTCCCGC+AGG 0.513037 7.2:-79448872 None:intergenic
CTCTGAACGAACTTGTTGCA+AGG 0.516760 7.2:+79449430 MS.gene62919:CDS
GCTCGGAGGCCTAATCCAGC+AGG 0.517190 7.2:-79448709 None:intergenic
CACAGCAATGTTAAGACCAT+CGG 0.522381 7.2:-79448923 None:intergenic
GACTGGTTTAGATAAAGAAA+AGG 0.528480 7.2:+79449179 MS.gene62919:CDS
CATCACCCATCATGTAAGCT+TGG 0.530202 7.2:-79449068 None:intergenic
TTGTATCCTTTAACCTCCAA+AGG 0.534196 7.2:-79449531 None:intergenic
CAACATTTCAGGGTAGACCT+TGG 0.534721 7.2:-79449639 None:intergenic
GTCAAGAACAGCAACTTCCT+CGG 0.536338 7.2:-79449016 None:intergenic
ATTGAAGACGTTCGACCTAA+CGG 0.537316 7.2:+79448263 MS.gene62919:CDS
ATCCATCTTCAGGGGTGACA+TGG 0.542033 7.2:-79449359 None:intergenic
TCTGAACGAACTTGTTGCAA+GGG 0.547830 7.2:+79449431 MS.gene62919:CDS
AACTTATCATCAAAACCTGC+GGG 0.549743 7.2:+79448857 MS.gene62919:CDS
CTATGCAAGCTTTGAAGCAG+TGG 0.552481 7.2:+79449386 MS.gene62919:CDS
TGCTAAGCTAGACGCTTCAC+CGG 0.556532 7.2:+79449128 MS.gene62919:CDS
CCGTTCATCGAGTACCCGCA+AGG 0.572227 7.2:-79449309 None:intergenic
CGGTAGCCAAGCTTACATGA+TGG 0.573036 7.2:+79449062 MS.gene62919:CDS
AATGAAGTGCTTGGAGAAGA+CGG 0.576562 7.2:+79449570 MS.gene62919:CDS
CATCATGTAAGCTTGGCTAC+CGG 0.578005 7.2:-79449061 None:intergenic
TGAATAAGCTTGACTCGGAT+AGG 0.578524 7.2:-79448822 None:intergenic
GCAATTCTTAAGCTTGCCGA+TGG 0.593187 7.2:+79448907 MS.gene62919:CDS
ATGATGGCTGCTCATCTCCA+AGG 0.593841 7.2:+79449622 MS.gene62919:CDS
GGTAGCCAAGCTTACATGAT+GGG 0.595267 7.2:+79449063 MS.gene62919:CDS
TATGCAAGCTTTGAAGCAGT+GGG 0.601223 7.2:+79449387 MS.gene62919:CDS
ACCATGACAAACTCAGCTAT+CGG 0.606560 7.2:+79448625 MS.gene62919:CDS
AATGCAACAGAAAACTCAGC+TGG 0.608895 7.2:-79449471 None:intergenic
AATGAACTAATGGAGTCTAA+AGG 0.613513 7.2:+79448176 None:intergenic
ACCGATAGCTGAGTTTGTCA+TGG 0.615180 7.2:-79448626 None:intergenic
TCCTCGGAAAAGCTTCGATG+AGG 0.618294 7.2:-79449000 None:intergenic
CCTCGGAAAAGCTTCGATGA+GGG 0.624053 7.2:-79448999 None:intergenic
GGAAAAGCTTCGATGAGGGA+AGG 0.627007 7.2:-79448995 None:intergenic
CCTTGCGGGTACTCGATGAA+CGG 0.629304 7.2:+79449309 MS.gene62919:CDS
ATTAGATAGTGAGTCAACAA+TGG 0.640442 7.2:-79448779 None:intergenic
GAACTAATGGAGTCTAAAGG+TGG 0.640546 7.2:+79448179 None:intergenic
CCTGAAATGTTGCTGGAGTG+AGG 0.643570 7.2:+79449650 MS.gene62919:CDS
CGGCAAGCTTAAGAATTGCA+GGG 0.643796 7.2:-79448903 None:intergenic
AAACTTATCATCAAAACCTG+CGG 0.648431 7.2:+79448856 MS.gene62919:CDS
CTGGAGTGAGGATGAGAACG+AGG 0.648538 7.2:+79449662 MS.gene62919:CDS
GCAGCCATCATTTCGAACAA+AGG 0.652571 7.2:-79449610 None:intergenic
CATCATTTCGAACAAAGGTA+CGG 0.654774 7.2:-79449605 None:intergenic
ATAGATGAATAAGCTTGACT+CGG 0.663143 7.2:-79448827 None:intergenic
GGTCTTTGGACAATGCTCGG+AGG 0.663736 7.2:-79448723 None:intergenic
GCATTGCACATTGATGCGAA+TGG 0.665215 7.2:+79449489 MS.gene62919:CDS
CTCGGAGGCCTAATCCAGCA+GGG 0.668437 7.2:-79448708 None:intergenic
GACTTCGAATTTGAACCTTG+CGG 0.668468 7.2:+79449294 MS.gene62919:CDS
GAGGTTAAAGGATACAACTG+TGG 0.681618 7.2:+79449537 MS.gene62919:CDS
ATAGCTGAATCCATCTTCAG+GGG 0.696514 7.2:-79449367 None:intergenic
GAGTGAGGATGAGAACGAGG+AGG 0.703166 7.2:+79449665 MS.gene62919:CDS
GAAGACGTTCGACCTAACGG+TGG 0.747756 7.2:+79448266 MS.gene62919:CDS
AAATCGGTGAGATACACTCG+CGG 0.764779 7.2:+79448946 MS.gene62919:CDS
TCTTCAATGATGTAACCGAG+AGG 0.773111 7.2:-79448248 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATGTTAACATTAATCAA+AGG - chr7.2:79448354-79448373 None:intergenic 15.0%
!! AAAGGAATTGAAATTGAAAT+GGG - chr7.2:79448336-79448355 None:intergenic 20.0%
!! ACTGCATAATAAAGAAAAAA+GGG - chr7.2:79448421-79448440 None:intergenic 20.0%
!! TATAGTATATTGCATAAGAT+TGG + chr7.2:79448371-79448390 MS.gene62919:intron 20.0%
! AAAACTTGACAAATTTCCTT+TGG + chr7.2:79449515-79449534 MS.gene62919:CDS 25.0%
! CAAAGGAATTGAAATTGAAA+TGG - chr7.2:79448337-79448356 None:intergenic 25.0%
! CACTGCATAATAAAGAAAAA+AGG - chr7.2:79448422-79448441 None:intergenic 25.0%
!!! GAGATAACTTTTTTCGAAAA+TGG + chr7.2:79448673-79448692 MS.gene62919:CDS 25.0%
!!! TTTTGTTGTTTGTAGAGAAA+GGG - chr7.2:79448579-79448598 None:intergenic 25.0%
!!! TTTTTGTTGTTTGTAGAGAA+AGG - chr7.2:79448580-79448599 None:intergenic 25.0%
AAACTTATCATCAAAACCTG+CGG + chr7.2:79448856-79448875 MS.gene62919:CDS 30.0%
ATAGATGAATAAGCTTGACT+CGG - chr7.2:79448830-79448849 None:intergenic 30.0%
ATGCTGATAAGTCACAAATT+TGG + chr7.2:79449088-79449107 MS.gene62919:CDS 30.0%
ATTAGATAGTGAGTCAACAA+TGG - chr7.2:79448782-79448801 None:intergenic 30.0%
TAAAAACTATATCACAACCC+AGG - chr7.2:79448469-79448488 None:intergenic 30.0%
TCTTAACATTGCTGTGAAAT+CGG + chr7.2:79448930-79448949 MS.gene62919:CDS 30.0%
! AAATTTCCTTTGGAGGTTAA+AGG + chr7.2:79449525-79449544 MS.gene62919:CDS 30.0%
! TGGGTTGTGATATAGTTTTT+AGG + chr7.2:79448468-79448487 MS.gene62919:intron 30.0%
! TTGCATAAGATTGGTTGATT+TGG + chr7.2:79448380-79448399 MS.gene62919:intron 30.0%
!! GACTGGTTTAGATAAAGAAA+AGG + chr7.2:79449179-79449198 MS.gene62919:CDS 30.0%
AACTTATCATCAAAACCTGC+GGG + chr7.2:79448857-79448876 MS.gene62919:CDS 35.0%
ACTTGACAAATTTCCTTTGG+AGG + chr7.2:79449518-79449537 MS.gene62919:CDS 35.0%
CATCATTTCGAACAAAGGTA+CGG - chr7.2:79449608-79449627 None:intergenic 35.0%
GAAGAAAAAAGCAAAGAGGA+GGG - chr7.2:79448546-79448565 None:intergenic 35.0%
GGTTGAAGAAAAAAGCAAAG+AGG - chr7.2:79448550-79448569 None:intergenic 35.0%
GTTTCAGAATCTCGTCAATT+TGG - chr7.2:79448747-79448766 None:intergenic 35.0%
TGAAGAAAAAAGCAAAGAGG+AGG - chr7.2:79448547-79448566 None:intergenic 35.0%
TTGTATCCTTTAACCTCCAA+AGG - chr7.2:79449534-79449553 None:intergenic 35.0%
TTTGTAGAGAAAGGGAACAA+AGG - chr7.2:79448571-79448590 None:intergenic 35.0%
! AAGTCGCATATGTCAGATTT+TGG - chr7.2:79449279-79449298 None:intergenic 35.0%
! AATCTCGTCAATTTGGTCTT+TGG - chr7.2:79448740-79448759 None:intergenic 35.0%
! AATTTTTCTACTCCACCGTT+AGG - chr7.2:79448281-79448300 None:intergenic 35.0%
! GAAAGAATCAATGAAGTGCT+TGG + chr7.2:79449561-79449580 MS.gene62919:CDS 35.0%
! GGTTTGATGACTAAGAATTC+TGG + chr7.2:79449237-79449256 MS.gene62919:CDS 35.0%
!! TGACTAAGAATTCTGGAATC+AGG + chr7.2:79449244-79449263 MS.gene62919:CDS 35.0%
!!! GTTTTGAAGGCTATGAAAAG+AGG + chr7.2:79448647-79448666 MS.gene62919:CDS 35.0%
AAACCATCCTGAGATTTCCT+GGG + chr7.2:79448449-79448468 MS.gene62919:intron 40.0%
AACCAGTCATGCACATTTCA+AGG - chr7.2:79449167-79449186 None:intergenic 40.0%
AATGCAACAGAAAACTCAGC+TGG - chr7.2:79449474-79449493 None:intergenic 40.0%
ACCATGACAAACTCAGCTAT+CGG + chr7.2:79448625-79448644 MS.gene62919:CDS 40.0%
ACTTCGAATTTGAACCTTGC+GGG + chr7.2:79449295-79449314 MS.gene62919:CDS 40.0%
ATAGCTGAATCCATCTTCAG+GGG - chr7.2:79449370-79449389 None:intergenic 40.0%
ATTGAAGACGTTCGACCTAA+CGG + chr7.2:79448263-79448282 MS.gene62919:CDS 40.0%
CACAGCAATGTTAAGACCAT+CGG - chr7.2:79448926-79448945 None:intergenic 40.0%
CATAGCTGAATCCATCTTCA+GGG - chr7.2:79449371-79449390 None:intergenic 40.0%
CGTACCTTTGTTCGAAATGA+TGG + chr7.2:79449606-79449625 MS.gene62919:CDS 40.0%
GACTTCGAATTTGAACCTTG+CGG + chr7.2:79449294-79449313 MS.gene62919:CDS 40.0%
GAGGTTAAAGGATACAACTG+TGG + chr7.2:79449537-79449556 MS.gene62919:CDS 40.0%
TACTCGATGAACGGAATTGA+AGG + chr7.2:79449318-79449337 MS.gene62919:CDS 40.0%
TCATGGTCATCTTGACTCAA+AGG - chr7.2:79448612-79448631 None:intergenic 40.0%
TCTTCAATGATGTAACCGAG+AGG - chr7.2:79448251-79448270 None:intergenic 40.0%
! AATGAAGTGCTTGGAGAAGA+CGG + chr7.2:79449570-79449589 MS.gene62919:CDS 40.0%
! GCTGTTCTTGACAGCTATTT+TGG + chr7.2:79449027-79449046 MS.gene62919:CDS 40.0%
! TTTGGTCTTTGGACAATGCT+CGG - chr7.2:79448729-79448748 None:intergenic 40.0%
!! CGCATATGTCAGATTTTGGT+AGG - chr7.2:79449275-79449294 None:intergenic 40.0%
!! TATGCAAGCTTTGAAGCAGT+GGG + chr7.2:79449387-79449406 MS.gene62919:CDS 40.0%
!! TCTGAACGAACTTGTTGCAA+GGG + chr7.2:79449431-79449450 MS.gene62919:CDS 40.0%
!! TGAATAAGCTTGACTCGGAT+AGG - chr7.2:79448825-79448844 None:intergenic 40.0%
!! TTTTTGTACGAAGCACCTCT+CGG + chr7.2:79448233-79448252 MS.gene62919:CDS 40.0%
!!! AACTCAGCTATCGGTTTTGA+AGG + chr7.2:79448634-79448653 MS.gene62919:CDS 40.0%
!!! GACAGCTATTTTGGCAAACT+GGG + chr7.2:79449036-79449055 MS.gene62919:CDS 40.0%
!!! TATTTTGGCAAACTGGGTTC+CGG + chr7.2:79449042-79449061 MS.gene62919:CDS 40.0%
!!! TGACAGCTATTTTGGCAAAC+TGG + chr7.2:79449035-79449054 MS.gene62919:CDS 40.0%
AAATCGGTGAGATACACTCG+CGG + chr7.2:79448946-79448965 MS.gene62919:CDS 45.0%
AAGACAGATGCATCTTCAGC+AGG + chr7.2:79449216-79449235 MS.gene62919:CDS 45.0%
ACCGATAGCTGAGTTTGTCA+TGG - chr7.2:79448629-79448648 None:intergenic 45.0%
AGGACAAGAAAAAGGAGAGG+AGG - chr7.2:79448523-79448542 None:intergenic 45.0%
AGGTGCTTCGTACAAAAAGG+AGG - chr7.2:79448231-79448250 None:intergenic 45.0%
ATCACAACCCAGGAAATCTC+AGG - chr7.2:79448459-79448478 None:intergenic 45.0%
CAAACCATCCTGAGATTTCC+TGG + chr7.2:79448448-79448467 MS.gene62919:intron 45.0%
CAACATTTCAGGGTAGACCT+TGG - chr7.2:79449642-79449661 None:intergenic 45.0%
CATCACCCATCATGTAAGCT+TGG - chr7.2:79449071-79449090 None:intergenic 45.0%
CATCATGTAAGCTTGGCTAC+CGG - chr7.2:79449064-79449083 None:intergenic 45.0%
CGGCAAGCTTAAGAATTGCA+GGG - chr7.2:79448906-79448925 None:intergenic 45.0%
CTCACTCCAGCAACATTTCA+GGG - chr7.2:79449652-79449671 None:intergenic 45.0%
GAAAAAAGCAAAGAGGAGGG+AGG - chr7.2:79448543-79448562 None:intergenic 45.0%
GCAATTCTTAAGCTTGCCGA+TGG + chr7.2:79448907-79448926 MS.gene62919:CDS 45.0%
GCAGCCATCATTTCGAACAA+AGG - chr7.2:79449613-79449632 None:intergenic 45.0%
GCATAGCTGAATCCATCTTC+AGG - chr7.2:79449372-79449391 None:intergenic 45.0%
GCATTGCACATTGATGCGAA+TGG + chr7.2:79449489-79449508 MS.gene62919:CDS 45.0%
GGTAGCCAAGCTTACATGAT+GGG + chr7.2:79449063-79449082 MS.gene62919:CDS 45.0%
GTCAAGAACAGCAACTTCCT+CGG - chr7.2:79449019-79449038 None:intergenic 45.0%
TCAACAATGGTGCATTCTGC+TGG - chr7.2:79448769-79448788 None:intergenic 45.0%
TCGGCAAGCTTAAGAATTGC+AGG - chr7.2:79448907-79448926 None:intergenic 45.0%
TGAGAACGAGGAGGAAGTTA+AGG + chr7.2:79449674-79449693 MS.gene62919:CDS 45.0%
!! CTATGCAAGCTTTGAAGCAG+TGG + chr7.2:79449386-79449405 MS.gene62919:CDS 45.0%
!! CTCTGAACGAACTTGTTGCA+AGG + chr7.2:79449430-79449449 MS.gene62919:CDS 45.0%
!! GAGAGGTGCTTCGTACAAAA+AGG - chr7.2:79448234-79448253 None:intergenic 45.0%
AAGCAATTTCGTAGTCCCGC+AGG - chr7.2:79448875-79448894 None:intergenic 50.0%
ATCCATCTTCAGGGGTGACA+TGG - chr7.2:79449362-79449381 None:intergenic 50.0%
ATCCATGTCACCCCTGAAGA+TGG + chr7.2:79449357-79449376 MS.gene62919:CDS 50.0%
ATGATGGCTGCTCATCTCCA+AGG + chr7.2:79449622-79449641 MS.gene62919:CDS 50.0%
CAACCCAGGAAATCTCAGGA+TGG - chr7.2:79448455-79448474 None:intergenic 50.0%
CCTCACTCCAGCAACATTTC+AGG - chr7.2:79449653-79449672 None:intergenic 50.0%
CCTCGGAAAAGCTTCGATGA+GGG - chr7.2:79449002-79449021 None:intergenic 50.0%
CCTGAAATGTTGCTGGAGTG+AGG + chr7.2:79449650-79449669 MS.gene62919:CDS 50.0%
CGGTAGCCAAGCTTACATGA+TGG + chr7.2:79449062-79449081 MS.gene62919:CDS 50.0%
GAGGAGGGAGGACAAGAAAA+AGG - chr7.2:79448531-79448550 None:intergenic 50.0%
GGAAAAGCTTCGATGAGGGA+AGG - chr7.2:79448998-79449017 None:intergenic 50.0%
GGCCTTGAAATGTGCATGAC+TGG + chr7.2:79449162-79449181 MS.gene62919:CDS 50.0%
GGGAGGACAAGAAAAAGGAG+AGG - chr7.2:79448526-79448545 None:intergenic 50.0%
GGTCTACCCTGAAATGTTGC+TGG + chr7.2:79449643-79449662 MS.gene62919:CDS 50.0%
TCAAGGCCATAGACAGCTTC+CGG - chr7.2:79449150-79449169 None:intergenic 50.0%
TCCTCGGAAAAGCTTCGATG+AGG - chr7.2:79449003-79449022 None:intergenic 50.0%
TGCTAAGCTAGACGCTTCAC+CGG + chr7.2:79449128-79449147 MS.gene62919:CDS 50.0%
TTCAGGGGTGACATGGATAG+TGG - chr7.2:79449355-79449374 None:intergenic 50.0%
TTCTCTGACCCTGCTGGATT+AGG + chr7.2:79448700-79448719 MS.gene62919:CDS 50.0%
CCTTGCGGGTACTCGATGAA+CGG + chr7.2:79449309-79449328 MS.gene62919:CDS 55.0%
CGCGGAAGCTTCATCTTTCC+TGG + chr7.2:79448964-79448983 MS.gene62919:CDS 55.0%
CTGGAGTGAGGATGAGAACG+AGG + chr7.2:79449662-79449681 MS.gene62919:CDS 55.0%
GAAGACGTTCGACCTAACGG+TGG + chr7.2:79448266-79448285 MS.gene62919:CDS 55.0%
GAGTGAGGATGAGAACGAGG+AGG + chr7.2:79449665-79449684 MS.gene62919:CDS 55.0%
GCTTCACCGGAAGCTGTCTA+TGG + chr7.2:79449141-79449160 MS.gene62919:CDS 55.0%
GGTCTTTGGACAATGCTCGG+AGG - chr7.2:79448726-79448745 None:intergenic 55.0%
TGAGGGAAGGATTGAGCTCC+AGG - chr7.2:79448985-79449004 None:intergenic 55.0%
! CCCTCATCGAAGCTTTTCCG+AGG + chr7.2:79448999-79449018 MS.gene62919:CDS 55.0%
! GGTGTTTTCTCTGACCCTGC+TGG + chr7.2:79448694-79448713 MS.gene62919:CDS 55.0%
CCGTTCATCGAGTACCCGCA+AGG - chr7.2:79449312-79449331 None:intergenic 60.0%
CTCGGAGGCCTAATCCAGCA+GGG - chr7.2:79448711-79448730 None:intergenic 60.0%
GCTCGGAGGCCTAATCCAGC+AGG - chr7.2:79448712-79448731 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 79448185 79449704 79448185 ID=MS.gene62919
chr7.2 mRNA 79448185 79449704 79448185 ID=MS.gene62919.t1;Parent=MS.gene62919
chr7.2 exon 79448185 79448322 79448185 ID=MS.gene62919.t1.exon1;Parent=MS.gene62919.t1
chr7.2 CDS 79448185 79448322 79448185 ID=cds.MS.gene62919.t1;Parent=MS.gene62919.t1
chr7.2 exon 79448622 79449704 79448622 ID=MS.gene62919.t1.exon2;Parent=MS.gene62919.t1
chr7.2 CDS 79448622 79449704 79448622 ID=cds.MS.gene62919.t1;Parent=MS.gene62919.t1
Gene Sequence

>MS.gene62919

ATGGAGTCTAAAGGTGGTAAAAAGAAGTCTAGCAGTAGTAGTTCCTCCTTTTTGTACGAAGCACCTCTCGGTTACATCATTGAAGACGTTCGACCTAACGGTGGAGTAGAAAAATTCAAATCAGCTGATTACTCAAACGTAAGTTGTTCCCATTTCAATTTCAATTCCTTTGATTAATGTTAACATTATAGTATATTGCATAAGATTGGTTGATTTGGCTTTGTTTTTTAACACCCTTTTTTCTTTATTATGCAGTGCACTCGCAAACCATCCTGAGATTTCCTGGGTTGTGATATAGTTTTTAGGTTTATCATTCTGCAAAATTATTCAAGTGTCCTCCTCTCCTTTTTCTTGTCCTCCCTCCTCTTTGCTTTTTTCTTCAACCTTTGTTCCCTTTCTCTACAAACAACAAAAATTGTTTTTTCCTTTGAGTCAAGATGACCATGACAAACTCAGCTATCGGTTTTGAAGGCTATGAAAAGAGGCTCGAGATAACTTTTTTCGAAAATGGTGTTTTCTCTGACCCTGCTGGATTAGGCCTCCGAGCATTGTCCAAAGACCAAATTGACGAGATTCTGAAACCAGCAGAATGCACCATTGTTGACTCACTATCTAATGATTATGTTGATTCATATGTCCTATCCGAGTCAAGCTTATTCATCTATGCGTACAAACTTATCATCAAAACCTGCGGGACTACGAAATTGCTTCTGTCTATCCCTGCAATTCTTAAGCTTGCCGATGGTCTTAACATTGCTGTGAAATCGGTGAGATACACTCGCGGAAGCTTCATCTTTCCTGGAGCTCAATCCTTCCCTCATCGAAGCTTTTCCGAGGAAGTTGCTGTTCTTGACAGCTATTTTGGCAAACTGGGTTCCGGTAGCCAAGCTTACATGATGGGTGATGCTGATAAGTCACAAATTTGGCACATTTACTCTGCTAGTGCTAAGCTAGACGCTTCACCGGAAGCTGTCTATGGCCTTGAAATGTGCATGACTGGTTTAGATAAAGAAAAGGCATCAGTGTTTTTCAAGACAGATGCATCTTCAGCAGGTTTGATGACTAAGAATTCTGGAATCAGGAAGATCCTACCAAAATCTGACATATGCGACTTCGAATTTGAACCTTGCGGGTACTCGATGAACGGAATTGAAGGAAGTGCAATATCCACTATCCATGTCACCCCTGAAGATGGATTCAGCTATGCAAGCTTTGAAGCAGTGGGTTATGAGTATGAAGAGAAATCTCTGAACGAACTTGTTGCAAGGGTTTTAGCATGTTTCTATCCAGCTGAGTTTTCTGTTGCATTGCACATTGATGCGAATGGTGAAAAACTTGACAAATTTCCTTTGGAGGTTAAAGGATACAACTGTGGAGAAAGAATCAATGAAGTGCTTGGAGAAGACGGCACTGTTGTGTACCGTACCTTTGTTCGAAATGATGGCTGCTCATCTCCAAGGTCTACCCTGAAATGTTGCTGGAGTGAGGATGAGAACGAGGAGGAAGTTAAGGAGATATAA
Protein sequence

>MS.gene62919.t1

MESKGGKKKSSSSSSSFLYEAPLGYIIEDVRPNGGVEKFKSADYSNMTMTNSAIGFEGYEKRLEITFFENGVFSDPAGLGLRALSKDQIDEILKPAECTIVDSLSNDYVDSYVLSESSLFIYAYKLIIKTCGTTKLLLSIPAILKLADGLNIAVKSVRYTRGSFIFPGAQSFPHRSFSEEVAVLDSYFGKLGSGSQAYMMGDADKSQIWHIYSASAKLDASPEAVYGLEMCMTGLDKEKASVFFKTDASSAGLMTKNSGIRKILPKSDICDFEFEPCGYSMNGIEGSAISTIHVTPEDGFSYASFEAVGYEYEEKSLNELVARVLACFYPAEFSVALHIDANGEKLDKFPLEVKGYNCGERINEVLGEDGTVVYRTFVRNDGCSSPRSTLKCCWSEDENEEEVKEI