Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63457.t1 | XP_003620535.2 | 92.5 | 294 | 18 | 1 | 43 | 336 | 97 | 386 | 1.20E-158 | 569.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63457.t1 | Q8VXZ0 | 67.0 | 294 | 90 | 4 | 50 | 336 | 81 | 374 | 6.2e-108 | 392.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63457.t1 | G7KNJ9 | 92.5 | 294 | 18 | 1 | 43 | 336 | 97 | 386 | 8.5e-159 | 569.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054638 | MS.gene63457 | 0.801178 | 1.02E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63457.t1 | MTR_6g086510 | 92.517 | 294 | 18 | 1 | 43 | 336 | 97 | 386 | 0.0 | 560 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63457.t1 | AT5G19460 | 67.007 | 294 | 90 | 4 | 50 | 336 | 81 | 374 | 2.10e-134 | 387 |
| MS.gene63457.t1 | AT5G19470 | 63.732 | 284 | 97 | 3 | 55 | 336 | 86 | 365 | 1.98e-124 | 362 |
| MS.gene63457.t1 | AT5G19470 | 63.498 | 263 | 90 | 3 | 55 | 315 | 86 | 344 | 1.95e-114 | 337 |
Find 86 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTGAAAATTATGGATATT+TGG | 0.161860 | 6.3:-79339694 | MS.gene63457:CDS |
| CGTGCTGCAGCTCCTTATTT+TGG | 0.177594 | 6.3:-79342859 | MS.gene63457:CDS |
| CTCTTTGAAGCATAGGCTTA+TGG | 0.222290 | 6.3:-79341310 | MS.gene63457:intron |
| CTCCTATTCTTAAGCTTCTT+AGG | 0.225839 | 6.3:+79339667 | None:intergenic |
| ATTTCTGCAACTTGCTTAAC+AGG | 0.232793 | 6.3:+79340264 | None:intergenic |
| TGTACCTTTATGCCAAAATA+AGG | 0.246886 | 6.3:+79342847 | None:intergenic |
| TGTTGGCGCTGTTTCATATA+TGG | 0.277222 | 6.3:-79340499 | MS.gene63457:CDS |
| TACATAAGTCCTGAAAATTA+TGG | 0.313397 | 6.3:-79339702 | MS.gene63457:CDS |
| TGGCTATGTAATCGAGCATT+TGG | 0.315863 | 6.3:-79343071 | MS.gene63457:CDS |
| CTTCTAATGGTGAGAGTGTC+GGG | 0.330502 | 6.3:-79344222 | None:intergenic |
| CCCAATGATGGAAGCCCCTT+TGG | 0.334011 | 6.3:-79343151 | MS.gene63457:CDS |
| ATGATCACGACAGCACAATT+TGG | 0.337212 | 6.3:+79340216 | None:intergenic |
| TGGTGCATGTTGCTATCTTT+TGG | 0.370504 | 6.3:-79343782 | MS.gene63457:CDS |
| TTGGGAGAGGAGCATATTCC+AGG | 0.372454 | 6.3:-79343052 | MS.gene63457:CDS |
| TCGCAAGTCTTGTAACTTTG+CGG | 0.386472 | 6.3:-79343739 | MS.gene63457:intron |
| ACCAAAGGGGCTTCCATCAT+TGG | 0.391806 | 6.3:+79343150 | None:intergenic |
| ATGCTTGATCATCTAGTTGC+AGG | 0.394775 | 6.3:-79341199 | MS.gene63457:CDS |
| GCTCTCTCATTCTGTTTCCT+TGG | 0.399245 | 6.3:-79344179 | MS.gene63457:intron |
| AGAAATACCCGTGTCGAAAC+AGG | 0.401405 | 6.3:+79340187 | None:intergenic |
| AGTGGCTATGTTGAGATAGA+TGG | 0.405918 | 6.3:-79341277 | MS.gene63457:CDS |
| GTCATTGAGGGCGACGTTGT+TGG | 0.409677 | 6.3:-79343336 | MS.gene63457:CDS |
| GGCTATGTAATCGAGCATTT+GGG | 0.440338 | 6.3:-79343070 | MS.gene63457:CDS |
| CGTTCTAATGAAAAGAAAAC+GGG | 0.450446 | 6.3:+79342880 | None:intergenic |
| TCCTCAGCTGTCTTCAGCAA+TGG | 0.451442 | 6.3:+79343109 | None:intergenic |
| AGGAGCATATTCCAGGTATA+CGG | 0.452411 | 6.3:-79343045 | MS.gene63457:CDS |
| CACACGAAATCCACATATCC+TGG | 0.461613 | 6.3:-79341223 | MS.gene63457:CDS |
| TTTCTTCCATTTGTCATTGA+GGG | 0.468948 | 6.3:-79343348 | MS.gene63457:CDS |
| TCTCAACATAGCCACTCATA+TGG | 0.469522 | 6.3:+79341284 | None:intergenic |
| AGGTTTGTTGAGCATTTAAG+AGG | 0.470542 | 6.3:-79343196 | MS.gene63457:CDS |
| CCAAAGGGGCTTCCATCATT+GGG | 0.472746 | 6.3:+79343151 | None:intergenic |
| GCCGCATGGAATTGATTGTC+AGG | 0.474919 | 6.3:-79340942 | MS.gene63457:CDS |
| AAGGAATGTGAAGAGGAAGC+AGG | 0.475425 | 6.3:-79340908 | MS.gene63457:CDS |
| TCATCTAGTTGCAGGAGGAC+TGG | 0.475914 | 6.3:-79341191 | MS.gene63457:intron |
| AGAAGGGTTGGCAGCAGTGA+AGG | 0.479679 | 6.3:-79343960 | MS.gene63457:CDS |
| ACTAGATGATCAAGCATTCC+AGG | 0.480283 | 6.3:+79341205 | None:intergenic |
| GTGAGAGTGTCGGGGTGGGT+TGG | 0.481887 | 6.3:-79344213 | MS.gene63457:CDS |
| ATATATGAAACAGCGCCAAC+AGG | 0.484156 | 6.3:+79340501 | None:intergenic |
| ACGTTCTAATGAAAAGAAAA+CGG | 0.490303 | 6.3:+79342879 | None:intergenic |
| ACGTCGCCCTCAATGACAAA+TGG | 0.490482 | 6.3:+79343342 | None:intergenic |
| CAGCGTAAGTTTATTGAGAA+GGG | 0.495178 | 6.3:-79343976 | MS.gene63457:CDS |
| GAGGAAAGAACCAGCGCACT+TGG | 0.499212 | 6.3:-79343091 | MS.gene63457:CDS |
| TTGTCAAATGAGGACTTCAC+AGG | 0.500036 | 6.3:+79342904 | None:intergenic |
| AATGAAACACAGTGACCAAA+GGG | 0.500047 | 6.3:+79343136 | None:intergenic |
| TTTCATATATGGACATCGAC+GGG | 0.501956 | 6.3:-79340488 | MS.gene63457:CDS |
| ATTTCTTCCATTTGTCATTG+AGG | 0.503126 | 6.3:-79343349 | MS.gene63457:CDS |
| TAGATGGGCAGAAGCACCTA+TGG | 0.503368 | 6.3:-79341261 | MS.gene63457:CDS |
| TTGTTGGATTCATTCACAAT+CGG | 0.508086 | 6.3:-79343320 | MS.gene63457:intron |
| CTCCTAAGAAGCTTAAGAAT+AGG | 0.508472 | 6.3:-79339669 | MS.gene63457:CDS |
| AATACCTCGTTCCGTATACC+TGG | 0.509788 | 6.3:+79343034 | None:intergenic |
| GCTTCTAATGGTGAGAGTGT+CGG | 0.513509 | 6.3:-79344223 | None:intergenic |
| TTGTCAGGAAAATGTTGTAA+AGG | 0.514029 | 6.3:-79340927 | MS.gene63457:CDS |
| TCGACGGGGATAGATACAAA+AGG | 0.523200 | 6.3:-79340473 | MS.gene63457:CDS |
| ATCAAGCATTCCAGGATATG+TGG | 0.524432 | 6.3:+79341213 | None:intergenic |
| CCGAACTTACTTAATAGAGA+TGG | 0.527571 | 6.3:+79340874 | None:intergenic |
| TTGACTTCCTGTTTCGACAC+GGG | 0.535466 | 6.3:-79340194 | MS.gene63457:intron |
| TTGCTACTGTTGCAGCCGCA+TGG | 0.541001 | 6.3:-79340956 | MS.gene63457:intron |
| GCAGCGTAAGTTTATTGAGA+AGG | 0.548870 | 6.3:-79343977 | MS.gene63457:intron |
| TACTTAATAGAGATGGACCT+GGG | 0.564877 | 6.3:+79340881 | None:intergenic |
| GTAAGTTTATTGAGAAGGGT+TGG | 0.566006 | 6.3:-79343972 | MS.gene63457:CDS |
| TTGCTTGTAGGACAAACAAT+CGG | 0.569942 | 6.3:-79343373 | MS.gene63457:intron |
| AAGAGGAAGCAGGAATCCCC+AGG | 0.577108 | 6.3:-79340898 | MS.gene63457:CDS |
| CGACGGGGATAGATACAAAA+GGG | 0.578922 | 6.3:-79340472 | MS.gene63457:CDS |
| GAAAACGGGTTTGTCAAATG+AGG | 0.582709 | 6.3:+79342894 | None:intergenic |
| CAATGAAACACAGTGACCAA+AGG | 0.586554 | 6.3:+79343135 | None:intergenic |
| GATTACATAGCCAAGTGCGC+TGG | 0.590241 | 6.3:+79343081 | None:intergenic |
| GACTTCTCTTCGCTATCCAT+AGG | 0.590285 | 6.3:+79341245 | None:intergenic |
| TCTTGCAGAGCTAAACCTGT+TGG | 0.594530 | 6.3:-79340516 | MS.gene63457:intron |
| TTTCTGCAACTTGCTTAACA+GGG | 0.595814 | 6.3:+79340265 | None:intergenic |
| TGTAATCGAGCATTTGGGAG+AGG | 0.600564 | 6.3:-79343065 | MS.gene63457:CDS |
| TAATGGTGAGAGTGTCGGGG+TGG | 0.604494 | 6.3:-79344218 | MS.gene63457:CDS |
| AATGGTGAGAGTGTCGGGGT+GGG | 0.607882 | 6.3:-79344217 | MS.gene63457:CDS |
| TGTTGTAAAGGAATGTGAAG+AGG | 0.609830 | 6.3:-79340915 | MS.gene63457:CDS |
| ATTGACTTCCTGTTTCGACA+CGG | 0.610821 | 6.3:-79340195 | MS.gene63457:CDS |
| GTGGCTATGTTGAGATAGAT+GGG | 0.621537 | 6.3:-79341276 | MS.gene63457:CDS |
| GTTTCATATATGGACATCGA+CGG | 0.645681 | 6.3:-79340489 | MS.gene63457:CDS |
| GCTTATGGAGTCCATATGAG+TGG | 0.651417 | 6.3:-79341295 | MS.gene63457:CDS |
| TTACTTAATAGAGATGGACC+TGG | 0.657192 | 6.3:+79340880 | None:intergenic |
| CTTGATCATCTAGTTGCAGG+AGG | 0.661487 | 6.3:-79341196 | MS.gene63457:CDS |
| TCCTGACAATCAATTCCATG+CGG | 0.664669 | 6.3:+79340941 | None:intergenic |
| TTCTAATGGTGAGAGTGTCG+GGG | 0.670548 | 6.3:-79344221 | None:intergenic |
| TCCATTGCTGAAGACAGCTG+AGG | 0.673124 | 6.3:-79343110 | MS.gene63457:CDS |
| TGTCAAATGAGGACTTCACA+GGG | 0.682552 | 6.3:+79342905 | None:intergenic |
| TTCATATATGGACATCGACG+GGG | 0.710863 | 6.3:-79340487 | MS.gene63457:CDS |
| ACTTAATAGAGATGGACCTG+GGG | 0.711401 | 6.3:+79340882 | None:intergenic |
| TATTCCAGGTATACGGAACG+AGG | 0.728323 | 6.3:-79343038 | MS.gene63457:intron |
| ATGAAACACAGTGACCAAAG+GGG | 0.740460 | 6.3:+79343137 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTCAAAAAAAAATAAAAA+TGG | - | chr6.3:79341406-79341425 | MS.gene63457:intron | 10.0% |
| !! | CTAAAAATAATTTAAATGAG+TGG | - | chr6.3:79341932-79341951 | MS.gene63457:intron | 15.0% |
| !!! | AAATGGGTTTTTATAATATT+GGG | + | chr6.3:79341310-79341329 | None:intergenic | 15.0% |
| !!! | ACTTTTCATTAAGATTTTTT+TGG | - | chr6.3:79340389-79340408 | MS.gene63457:intron | 15.0% |
| !!! | GTGTATTAATTTTAAGAAAA+GGG | - | chr6.3:79342115-79342134 | MS.gene63457:intron | 15.0% |
| !!! | TAAATGGGTTTTTATAATAT+TGG | + | chr6.3:79341311-79341330 | None:intergenic | 15.0% |
| !! | AAACACATATTTCATAAGTA+GGG | + | chr6.3:79343743-79343762 | None:intergenic | 20.0% |
| !! | AAGGATGAAATTAATATCAA+CGG | - | chr6.3:79342825-79342844 | MS.gene63457:intron | 20.0% |
| !! | ATCACAACATATAATCATTA+AGG | + | chr6.3:79344142-79344161 | None:intergenic | 20.0% |
| !! | ATTCTAAACTTGATTCAAAA+TGG | + | chr6.3:79340275-79340294 | None:intergenic | 20.0% |
| !! | CAAAAAAAAACATCAATCTT+TGG | - | chr6.3:79341113-79341132 | MS.gene63457:intron | 20.0% |
| !! | GTTATTCATGAATATTTCTT+TGG | - | chr6.3:79340634-79340653 | MS.gene63457:intron | 20.0% |
| !! | TAAGATTGGATTTAATTGAT+TGG | - | chr6.3:79339819-79339838 | MS.gene63457:intron | 20.0% |
| !! | TAATATCTTCCTCTAATTTA+CGG | - | chr6.3:79341348-79341367 | MS.gene63457:intron | 20.0% |
| !! | TATAAGGAAAAATGAAGAAA+GGG | + | chr6.3:79340589-79340608 | None:intergenic | 20.0% |
| !! | TTATAAGGAAAAATGAAGAA+AGG | + | chr6.3:79340590-79340609 | None:intergenic | 20.0% |
| !! | TTATATAGCTGCTAAAAAAA+AGG | + | chr6.3:79342347-79342366 | None:intergenic | 20.0% |
| !! | TTGTTACATTAAATAACAGA+TGG | - | chr6.3:79343560-79343579 | MS.gene63457:intron | 20.0% |
| !!! | ACTTCATTAAACAAATTTTG+TGG | + | chr6.3:79341437-79341456 | None:intergenic | 20.0% |
| !!! | AGTGTTAATATTTTGATGTT+TGG | - | chr6.3:79340047-79340066 | MS.gene63457:intron | 20.0% |
| !!! | ATTAACCTCTAATAGATTTT+TGG | - | chr6.3:79340293-79340312 | MS.gene63457:CDS | 20.0% |
| !!! | CTTCATTAAACAAATTTTGT+GGG | + | chr6.3:79341436-79341455 | None:intergenic | 20.0% |
| !!! | GAGAAATTTATTACAACTTT+TGG | + | chr6.3:79342070-79342089 | None:intergenic | 20.0% |
| !!! | GGTGTATTAATTTTAAGAAA+AGG | - | chr6.3:79342114-79342133 | MS.gene63457:intron | 20.0% |
| !!! | GTGTTAATATTTTGATGTTT+GGG | - | chr6.3:79340048-79340067 | MS.gene63457:intron | 20.0% |
| !!! | TTCATTAAACAAATTTTGTG+GGG | + | chr6.3:79341435-79341454 | None:intergenic | 20.0% |
| !!! | TTTTCAAATACTTAAAGTCA+TGG | + | chr6.3:79340329-79340348 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATATATATGAC+CGG | - | chr6.3:79342227-79342246 | MS.gene63457:intron | 20.0% |
| ! | AAAACATGTTTAAGCTCATT+CGG | + | chr6.3:79342009-79342028 | None:intergenic | 25.0% |
| ! | AAATAAATGTGAGGTTACTT+TGG | - | chr6.3:79341961-79341980 | MS.gene63457:intron | 25.0% |
| ! | AACAAGACAATCTATTTAAG+AGG | + | chr6.3:79340469-79340488 | None:intergenic | 25.0% |
| ! | AAGAAATGTTTAACATGTCA+AGG | + | chr6.3:79342754-79342773 | None:intergenic | 25.0% |
| ! | AATAAAAGACATGTAATGAG+AGG | + | chr6.3:79342423-79342442 | None:intergenic | 25.0% |
| ! | AATGTAACAAGTTACTACAA+AGG | + | chr6.3:79343550-79343569 | None:intergenic | 25.0% |
| ! | AATTGGAGAATGAGTTTAAA+AGG | + | chr6.3:79343488-79343507 | None:intergenic | 25.0% |
| ! | ACGTTCTAATGAAAAGAAAA+CGG | + | chr6.3:79340996-79341015 | None:intergenic | 25.0% |
| ! | AGAAATGTTTAACATGTCAA+GGG | + | chr6.3:79342753-79342772 | None:intergenic | 25.0% |
| ! | AGCAAAAAAAACAACTTTCA+CGG | + | chr6.3:79342215-79342234 | None:intergenic | 25.0% |
| ! | AGGAGTTATTTATCATTTGA+TGG | - | chr6.3:79340021-79340040 | MS.gene63457:intron | 25.0% |
| ! | ATTAGAGGAAGATATTATTG+TGG | + | chr6.3:79341345-79341364 | None:intergenic | 25.0% |
| ! | ATTGGATTTAATTGATTGGA+CGG | - | chr6.3:79339823-79339842 | MS.gene63457:intron | 25.0% |
| ! | ATTGTCCAAAAATCTATTAG+AGG | + | chr6.3:79340301-79340320 | None:intergenic | 25.0% |
| ! | CAAACACATATTTCATAAGT+AGG | + | chr6.3:79343744-79343763 | None:intergenic | 25.0% |
| ! | GAATTGAAATGAATGCATTA+TGG | + | chr6.3:79341263-79341282 | None:intergenic | 25.0% |
| ! | GTAATAAATTTCTCTGAATG+CGG | - | chr6.3:79342076-79342095 | MS.gene63457:intron | 25.0% |
| ! | GTTAATGTGAATGATGTTAA+GGG | + | chr6.3:79340253-79340272 | None:intergenic | 25.0% |
| ! | TACATAAGTCCTGAAAATTA+TGG | - | chr6.3:79344170-79344189 | MS.gene63457:intron | 25.0% |
| ! | TCCTGAAAATTATGGATATT+TGG | - | chr6.3:79344178-79344197 | MS.gene63457:intron | 25.0% |
| ! | TGAAATTAATATCAACGGAT+TGG | - | chr6.3:79342830-79342849 | MS.gene63457:intron | 25.0% |
| ! | TGAAGGATTAAGCAAATATT+TGG | - | chr6.3:79341873-79341892 | MS.gene63457:intron | 25.0% |
| !! | ATGTCTATAATCTAAAGTGT+CGG | + | chr6.3:79343108-79343127 | None:intergenic | 25.0% |
| !! | ATTCAAGATACTTTGTTTGA+AGG | - | chr6.3:79341551-79341570 | MS.gene63457:intron | 25.0% |
| !! | GCTATTAAGTGTTTTCTTTA+GGG | - | chr6.3:79342861-79342880 | MS.gene63457:CDS | 25.0% |
| !! | TCCAAATATCCATAATTTTC+AGG | + | chr6.3:79344182-79344201 | None:intergenic | 25.0% |
| !! | TGCTATTAAGTGTTTTCTTT+AGG | - | chr6.3:79342860-79342879 | MS.gene63457:CDS | 25.0% |
| !!! | AGGCTTTATGAATGTATTTT+AGG | - | chr6.3:79344036-79344055 | MS.gene63457:intron | 25.0% |
| !!! | ATAATGGAATTGGATTTTCA+AGG | - | chr6.3:79344016-79344035 | MS.gene63457:intron | 25.0% |
| !!! | CATTTGTTTTCTTATTCTTG+GGG | - | chr6.3:79344104-79344123 | MS.gene63457:intron | 25.0% |
| !!! | GCATTTGTTTTCTTATTCTT+GGG | - | chr6.3:79344103-79344122 | MS.gene63457:intron | 25.0% |
| !!! | GTTAAACTTTGAAATTGTTC+AGG | - | chr6.3:79340656-79340675 | MS.gene63457:intron | 25.0% |
| !!! | TATTTTGATGTTTGGGAAAT+TGG | - | chr6.3:79340055-79340074 | MS.gene63457:intron | 25.0% |
| !!! | TGCATTTGTTTTCTTATTCT+TGG | - | chr6.3:79344102-79344121 | MS.gene63457:intron | 25.0% |
| !!! | TGGTTTTTGAAATAAATGTG+AGG | - | chr6.3:79341952-79341971 | MS.gene63457:intron | 25.0% |
| !!! | TTACTCTTTTTTTTGCTGAT+GGG | - | chr6.3:79339873-79339892 | MS.gene63457:intron | 25.0% |
| !!! | TTTTATTCTCTTTGAAGCAT+AGG | - | chr6.3:79342555-79342574 | MS.gene63457:intron | 25.0% |
| AAAACACAGACAAGAAATGT+AGG | + | chr6.3:79340937-79340956 | None:intergenic | 30.0% | |
| AAAACCACAGAAGACTTTAA+AGG | + | chr6.3:79341191-79341210 | None:intergenic | 30.0% | |
| AAAAGAAGAAGTTGTATTGC+AGG | + | chr6.3:79341385-79341404 | None:intergenic | 30.0% | |
| AAACCACAGAAGACTTTAAA+GGG | + | chr6.3:79341190-79341209 | None:intergenic | 30.0% | |
| AAAGAAGAAGTTGTATTGCA+GGG | + | chr6.3:79341384-79341403 | None:intergenic | 30.0% | |
| AACTAAATTTATACACCCTC+CGG | - | chr6.3:79341077-79341096 | MS.gene63457:intron | 30.0% | |
| AAGAAATGTATGAAATGACG+TGG | + | chr6.3:79343719-79343738 | None:intergenic | 30.0% | |
| AATCCAATTCCATTATGACA+CGG | + | chr6.3:79344012-79344031 | None:intergenic | 30.0% | |
| AATGTTGTCAATTGTCAAAG+CGG | - | chr6.3:79343867-79343886 | MS.gene63457:intron | 30.0% | |
| AGCAAATGGTTGGATATTTA+TGG | + | chr6.3:79343298-79343317 | None:intergenic | 30.0% | |
| ATTTCTTCCATTTGTCATTG+AGG | - | chr6.3:79340523-79340542 | MS.gene63457:intron | 30.0% | |
| CATTCAATGAAAGAGAATGA+TGG | + | chr6.3:79340894-79340913 | None:intergenic | 30.0% | |
| CCATCTCTATTAAGTAAGTT+CGG | - | chr6.3:79342998-79343017 | MS.gene63457:intron | 30.0% | |
| CGTTCTAATGAAAAGAAAAC+GGG | + | chr6.3:79340995-79341014 | None:intergenic | 30.0% | |
| CTAAAAAAAAGGTCTGAACT+TGG | + | chr6.3:79342336-79342355 | None:intergenic | 30.0% | |
| GGGTAATATGTATTATCATC+CGG | - | chr6.3:79342881-79342900 | MS.gene63457:CDS | 30.0% | |
| GGTTAATGTGAATGATGTTA+AGG | + | chr6.3:79340254-79340273 | None:intergenic | 30.0% | |
| GTGGAGAATTGACAATAAAT+GGG | + | chr6.3:79341326-79341345 | None:intergenic | 30.0% | |
| TAGGAATAACAGTGTAAAAG+TGG | + | chr6.3:79341161-79341180 | None:intergenic | 30.0% | |
| TATGACACAAGCATCTTATA+AGG | + | chr6.3:79340605-79340624 | None:intergenic | 30.0% | |
| TCTCAAATTAACACCAATGT+CGG | - | chr6.3:79343183-79343202 | MS.gene63457:CDS | 30.0% | |
| TGTACCTTTATGCCAAAATA+AGG | + | chr6.3:79341028-79341047 | None:intergenic | 30.0% | |
| TGTGGAGAATTGACAATAAA+TGG | + | chr6.3:79341327-79341346 | None:intergenic | 30.0% | |
| TTATACTGAATAGCGTATCA+TGG | + | chr6.3:79343847-79343866 | None:intergenic | 30.0% | |
| TTGATTTCGAAATTGCTTGT+AGG | - | chr6.3:79340487-79340506 | MS.gene63457:CDS | 30.0% | |
| TTGGATTTAATTGATTGGAC+GGG | - | chr6.3:79339824-79339843 | MS.gene63457:intron | 30.0% | |
| TTGTATCCTAAAGCTCTTAT+CGG | - | chr6.3:79342508-79342527 | MS.gene63457:intron | 30.0% | |
| TTGTCAGGAAAATGTTGTAA+AGG | - | chr6.3:79342945-79342964 | MS.gene63457:intron | 30.0% | |
| TTGTTGGATTCATTCACAAT+CGG | - | chr6.3:79340552-79340571 | MS.gene63457:intron | 30.0% | |
| TTTCTAATGCAGATTTGTCT+CGG | - | chr6.3:79339756-79339775 | MS.gene63457:intron | 30.0% | |
| TTTCTTCCATTTGTCATTGA+GGG | - | chr6.3:79340524-79340543 | MS.gene63457:intron | 30.0% | |
| ! | AATCCAATTTTGTGCACTAA+AGG | + | chr6.3:79343050-79343069 | None:intergenic | 30.0% |
| ! | ACATCGTATAGTTTTCTTGT+CGG | - | chr6.3:79339722-79339741 | MS.gene63457:intron | 30.0% |
| ! | AGACTTTAAAGGGGTATATT+AGG | + | chr6.3:79341180-79341199 | None:intergenic | 30.0% |
| ! | CAAAGTATCTTGAATTACGT+TGG | + | chr6.3:79341546-79341565 | None:intergenic | 30.0% |
| ! | GAGGGTGTATAAATTTAGTT+TGG | + | chr6.3:79341077-79341096 | None:intergenic | 30.0% |
| ! | GGATTTTTCATTTCAGCAAA+TGG | + | chr6.3:79343312-79343331 | None:intergenic | 30.0% |
| ! | TTCTCAGTGGTGTTAAATAA+CGG | - | chr6.3:79343774-79343793 | MS.gene63457:CDS | 30.0% |
| ! | TTTTCATTTCAGCAAATGGT+TGG | + | chr6.3:79343308-79343327 | None:intergenic | 30.0% |
| ! | TTTTTGCTTATATACGTGAC+CGG | + | chr6.3:79341099-79341118 | None:intergenic | 30.0% |
| !!! | GAAATTGGTTTTGTTTAGGA+TGG | - | chr6.3:79340070-79340089 | MS.gene63457:intron | 30.0% |
| !!! | GTTACTCTTTTTTTTGCTGA+TGG | - | chr6.3:79339872-79339891 | MS.gene63457:intron | 30.0% |
| !!! | TTGGGAAATTGGTTTTGTTT+AGG | - | chr6.3:79340066-79340085 | MS.gene63457:intron | 30.0% |
| AAAATTAACTTTACACCCGC+AGG | + | chr6.3:79340446-79340465 | None:intergenic | 35.0% | |
| AATGAAACACAGTGACCAAA+GGG | + | chr6.3:79340739-79340758 | None:intergenic | 35.0% | |
| AATGTAATCACATGTGTCAG+TGG | + | chr6.3:79343148-79343167 | None:intergenic | 35.0% | |
| ACAGACAAGAAATGTAGGTT+AGG | + | chr6.3:79340932-79340951 | None:intergenic | 35.0% | |
| AGTGTTGTCAATCGTAGATA+GGG | + | chr6.3:79343950-79343969 | None:intergenic | 35.0% | |
| ATAGAAGACCCATCTTCAAT+AGG | + | chr6.3:79341686-79341705 | None:intergenic | 35.0% | |
| CAGCGTAAGTTTATTGAGAA+GGG | - | chr6.3:79339896-79339915 | MS.gene63457:intron | 35.0% | |
| CCAATGAAGAGACATTTAAC+TGG | + | chr6.3:79343333-79343352 | None:intergenic | 35.0% | |
| CCAGTTAAATGTCTCTTCAT+TGG | - | chr6.3:79343330-79343349 | MS.gene63457:CDS | 35.0% | |
| CCGAACTTACTTAATAGAGA+TGG | + | chr6.3:79343001-79343020 | None:intergenic | 35.0% | |
| CTAAACTTGGACAGAGATAA+CGG | + | chr6.3:79342304-79342323 | None:intergenic | 35.0% | |
| CTATTAAGTAAGTTCGGAAC+TGG | - | chr6.3:79343004-79343023 | MS.gene63457:intron | 35.0% | |
| CTCCTAAGAAGCTTAAGAAT+AGG | - | chr6.3:79344203-79344222 | MS.gene63457:CDS | 35.0% | |
| CTCCTATTCTTAAGCTTCTT+AGG | + | chr6.3:79344208-79344227 | None:intergenic | 35.0% | |
| GACATGTAATGAGAGGTAAT+TGG | + | chr6.3:79342416-79342435 | None:intergenic | 35.0% | |
| GATAATGTGTAACTGCTGAA+AGG | - | chr6.3:79342806-79342825 | MS.gene63457:intron | 35.0% | |
| GATAGACAACCGTAAATTAG+AGG | + | chr6.3:79341360-79341379 | None:intergenic | 35.0% | |
| GTAAGTTTATTGAGAAGGGT+TGG | - | chr6.3:79339900-79339919 | MS.gene63457:intron | 35.0% | |
| GTAGCAATTAACTCAAACTC+CGG | + | chr6.3:79342903-79342922 | None:intergenic | 35.0% | |
| GTGTTTGAAGATGTAGCATT+TGG | - | chr6.3:79341623-79341642 | MS.gene63457:intron | 35.0% | |
| GTTTCATATATGGACATCGA+CGG | - | chr6.3:79343383-79343402 | MS.gene63457:intron | 35.0% | |
| TACACCAAGAGTTAAACTTG+TGG | + | chr6.3:79341287-79341306 | None:intergenic | 35.0% | |
| TACGAGTTTCCAGAAAAGTA+CGG | + | chr6.3:79343980-79343999 | None:intergenic | 35.0% | |
| TACTTAATAGAGATGGACCT+GGG | + | chr6.3:79342994-79343013 | None:intergenic | 35.0% | |
| TAGAAGACCCATCTTCAATA+GGG | + | chr6.3:79341685-79341704 | None:intergenic | 35.0% | |
| TGAAGTTCCAAGTGAAACAA+TGG | - | chr6.3:79341826-79341845 | MS.gene63457:intron | 35.0% | |
| TGAGTCTTCAACAACAAGAA+GGG | + | chr6.3:79341504-79341523 | None:intergenic | 35.0% | |
| TGCATTATGGAAAGCTGTTA+TGG | + | chr6.3:79341250-79341269 | None:intergenic | 35.0% | |
| TGCTTATATATATGACCGGA+GGG | - | chr6.3:79342231-79342250 | MS.gene63457:intron | 35.0% | |
| TGGATTTAATTGATTGGACG+GGG | - | chr6.3:79339825-79339844 | MS.gene63457:intron | 35.0% | |
| TGTTGTAAAGGAATGTGAAG+AGG | - | chr6.3:79342957-79342976 | MS.gene63457:intron | 35.0% | |
| TTACTTAATAGAGATGGACC+TGG | + | chr6.3:79342995-79343014 | None:intergenic | 35.0% | |
| TTCACCACAAGTTTAACTCT+TGG | - | chr6.3:79341280-79341299 | MS.gene63457:CDS | 35.0% | |
| TTGAAGATGTAGCATTTGGA+GGG | - | chr6.3:79341627-79341646 | MS.gene63457:intron | 35.0% | |
| TTGCTTATATATATGACCGG+AGG | - | chr6.3:79342230-79342249 | MS.gene63457:intron | 35.0% | |
| TTGCTTGTAGGACAAACAAT+CGG | - | chr6.3:79340499-79340518 | MS.gene63457:CDS | 35.0% | |
| TTGGATAGCATTGCTAAACT+TGG | + | chr6.3:79342317-79342336 | None:intergenic | 35.0% | |
| TTGTTGAAGACTCACTTGAT+GGG | - | chr6.3:79341510-79341529 | MS.gene63457:intron | 35.0% | |
| TTTCATATATGGACATCGAC+GGG | - | chr6.3:79343384-79343403 | MS.gene63457:intron | 35.0% | |
| TTTCTTTGACCGTGTCATAA+TGG | - | chr6.3:79344000-79344019 | MS.gene63457:intron | 35.0% | |
| TTTGAAGATGTAGCATTTGG+AGG | - | chr6.3:79341626-79341645 | MS.gene63457:intron | 35.0% | |
| ! | AACCACAGAAGACTTTAAAG+GGG | + | chr6.3:79341189-79341208 | None:intergenic | 35.0% |
| ! | AGCAGTTTGATCCTTTGTTT+AGG | - | chr6.3:79339793-79339812 | MS.gene63457:intron | 35.0% |
| ! | AGCTAACTGAACTTCTTTTG+TGG | - | chr6.3:79343236-79343255 | MS.gene63457:intron | 35.0% |
| ! | AGCTTTTCTGGACTTAAACA+TGG | - | chr6.3:79341787-79341806 | MS.gene63457:intron | 35.0% |
| ! | ATTTCTGCAACTTGCTTAAC+AGG | + | chr6.3:79343611-79343630 | None:intergenic | 35.0% |
| ! | GAAGTACCCTCATTTGATTT+GGG | - | chr6.3:79341452-79341471 | MS.gene63457:intron | 35.0% |
| ! | GATGTCAAAAAGTGATGATG+AGG | - | chr6.3:79341580-79341599 | MS.gene63457:intron | 35.0% |
| ! | TGAAGTACCCTCATTTGATT+TGG | - | chr6.3:79341451-79341470 | MS.gene63457:intron | 35.0% |
| ! | TTTCTGCAACTTGCTTAACA+GGG | + | chr6.3:79343610-79343629 | None:intergenic | 35.0% |
| !! | AAGAGCTTTAGGATACAATC+TGG | + | chr6.3:79342506-79342525 | None:intergenic | 35.0% |
| !! | AGGTTTGTTGAGCATTTAAG+AGG | - | chr6.3:79340676-79340695 | MS.gene63457:intron | 35.0% |
| !!! | AGCTCCTTATTTTGGCATAA+AGG | - | chr6.3:79341021-79341040 | MS.gene63457:intron | 35.0% |
| !!! | CGAGCTAAGAGCATTTTTTT+TGG | - | chr6.3:79339956-79339975 | MS.gene63457:intron | 35.0% |
| !!! | GTTTTTTTCGCTTAGCTCAT+AGG | - | chr6.3:79340001-79340020 | MS.gene63457:intron | 35.0% |
| AAAAAGAGTAACCATGCGCA+AGG | + | chr6.3:79339864-79339883 | None:intergenic | 40.0% | |
| AACAAAGCCCCTATTGAAGA+TGG | - | chr6.3:79341674-79341693 | MS.gene63457:intron | 40.0% | |
| ACAAAGCCCCTATTGAAGAT+GGG | - | chr6.3:79341675-79341694 | MS.gene63457:intron | 40.0% | |
| ACTAGATGATCAAGCATTCC+AGG | + | chr6.3:79342670-79342689 | None:intergenic | 40.0% | |
| ACTTAATAGAGATGGACCTG+GGG | + | chr6.3:79342993-79343012 | None:intergenic | 40.0% | |
| AGAAGACCCATCTTCAATAG+GGG | + | chr6.3:79341684-79341703 | None:intergenic | 40.0% | |
| AGGTCACAACAAAGCAAACA+TGG | - | chr6.3:79341600-79341619 | MS.gene63457:intron | 40.0% | |
| AGTGGCTATGTTGAGATAGA+TGG | - | chr6.3:79342595-79342614 | MS.gene63457:intron | 40.0% | |
| ATATATGAAACAGCGCCAAC+AGG | + | chr6.3:79343374-79343393 | None:intergenic | 40.0% | |
| ATCAAGCATTCCAGGATATG+TGG | + | chr6.3:79342662-79342681 | None:intergenic | 40.0% | |
| ATGAAACACAGTGACCAAAG+GGG | + | chr6.3:79340738-79340757 | None:intergenic | 40.0% | |
| ATGATCACGACAGCACAATT+TGG | + | chr6.3:79343659-79343678 | None:intergenic | 40.0% | |
| ATGCGGTTGTACAATGATGT+TGG | - | chr6.3:79342093-79342112 | MS.gene63457:intron | 40.0% | |
| ATGCTTGATCATCTAGTTGC+AGG | - | chr6.3:79342673-79342692 | MS.gene63457:intron | 40.0% | |
| CAATCTTAGCGCCTAAACAA+AGG | + | chr6.3:79339807-79339826 | None:intergenic | 40.0% | |
| CAATGAAACACAGTGACCAA+AGG | + | chr6.3:79340740-79340759 | None:intergenic | 40.0% | |
| CAGTGTTGTCAATCGTAGAT+AGG | + | chr6.3:79343951-79343970 | None:intergenic | 40.0% | |
| CATGTTTAAGCTCATTCGGT+TGG | + | chr6.3:79342005-79342024 | None:intergenic | 40.0% | |
| CCTCCTTTAGTGCACAAAAT+TGG | - | chr6.3:79343044-79343063 | MS.gene63457:CDS | 40.0% | |
| CTATACGATGTAACACACCA+AGG | + | chr6.3:79339713-79339732 | None:intergenic | 40.0% | |
| CTATCTACGATTGACAACAC+TGG | - | chr6.3:79343949-79343968 | MS.gene63457:CDS | 40.0% | |
| CTGTAACCGATAAGAGCTTT+AGG | + | chr6.3:79342517-79342536 | None:intergenic | 40.0% | |
| GAAGGAAGTTCCAGATTGTA+AGG | - | chr6.3:79339930-79339949 | MS.gene63457:intron | 40.0% | |
| GCAGCGTAAGTTTATTGAGA+AGG | - | chr6.3:79339895-79339914 | MS.gene63457:intron | 40.0% | |
| GCAGTTACACATTATCAGCA+CGG | + | chr6.3:79342802-79342821 | None:intergenic | 40.0% | |
| GCTAAGCGAAAAAAACAGCT+AGG | + | chr6.3:79339997-79340016 | None:intergenic | 40.0% | |
| GGAGACGAGGAGAATAAAAT+TGG | + | chr6.3:79343505-79343524 | None:intergenic | 40.0% | |
| GGCTATGTAATCGAGCATTT+GGG | - | chr6.3:79340802-79340821 | MS.gene63457:intron | 40.0% | |
| GGTCACAACAAAGCAAACAT+GGG | - | chr6.3:79341601-79341620 | MS.gene63457:intron | 40.0% | |
| GTATGTACGTGTATTCCAAG+AGG | + | chr6.3:79341220-79341239 | None:intergenic | 40.0% | |
| GTGAGTCTTCAACAACAAGA+AGG | + | chr6.3:79341505-79341524 | None:intergenic | 40.0% | |
| GTGGCTATGTTGAGATAGAT+GGG | - | chr6.3:79342596-79342615 | MS.gene63457:intron | 40.0% | |
| GTGTTGTCAATCGTAGATAG+GGG | + | chr6.3:79343949-79343968 | None:intergenic | 40.0% | |
| GTTGTTGAAGACTCACTTGA+TGG | - | chr6.3:79341509-79341528 | MS.gene63457:intron | 40.0% | |
| TCCTGACAATCAATTCCATG+CGG | + | chr6.3:79342934-79342953 | None:intergenic | 40.0% | |
| TCGATGCCCAAATCAAATGA+GGG | + | chr6.3:79341461-79341480 | None:intergenic | 40.0% | |
| TCTCAACATAGCCACTCATA+TGG | + | chr6.3:79342591-79342610 | None:intergenic | 40.0% | |
| TGATCACGACACTACTAGAA+AGG | + | chr6.3:79343526-79343545 | None:intergenic | 40.0% | |
| TGGCTATGTAATCGAGCATT+TGG | - | chr6.3:79340801-79340820 | MS.gene63457:intron | 40.0% | |
| TGTCAAATGAGGACTTCACA+GGG | + | chr6.3:79340970-79340989 | None:intergenic | 40.0% | |
| TGTTGAAGACTCACTTGATG+GGG | - | chr6.3:79341511-79341530 | MS.gene63457:intron | 40.0% | |
| TTCATATATGGACATCGACG+GGG | - | chr6.3:79343385-79343404 | MS.gene63457:intron | 40.0% | |
| TTGTCAAATGAGGACTTCAC+AGG | + | chr6.3:79340971-79340990 | None:intergenic | 40.0% | |
| ! | AAGCTCTTATCGGTTACAGT+AGG | - | chr6.3:79342518-79342537 | MS.gene63457:intron | 40.0% |
| ! | AGCTGAGATTGATGAGTTGA+AGG | - | chr6.3:79341856-79341875 | MS.gene63457:intron | 40.0% |
| ! | AGGAGCATATTCCAGGTATA+CGG | - | chr6.3:79340827-79340846 | MS.gene63457:intron | 40.0% |
| ! | ATTGACTTCCTGTTTCGACA+CGG | - | chr6.3:79343677-79343696 | MS.gene63457:intron | 40.0% |
| ! | CCAATTTTGTGCACTAAAGG+AGG | + | chr6.3:79343047-79343066 | None:intergenic | 40.0% |
| ! | CTTTGTTTAGGCGCTAAGAT+TGG | - | chr6.3:79339805-79339824 | MS.gene63457:intron | 40.0% |
| ! | GAAAACGGGTTTGTCAAATG+AGG | + | chr6.3:79340981-79341000 | None:intergenic | 40.0% |
| ! | TCGCAAGTCTTGTAACTTTG+CGG | - | chr6.3:79340133-79340152 | MS.gene63457:intron | 40.0% |
| ! | TGACCGTGTCATAATGGAAT+TGG | - | chr6.3:79344006-79344025 | MS.gene63457:intron | 40.0% |
| ! | TGGTGCATGTTGCTATCTTT+TGG | - | chr6.3:79340090-79340109 | MS.gene63457:intron | 40.0% |
| ! | TGTGGTTTTCAAACACCTCT+TGG | - | chr6.3:79341202-79341221 | MS.gene63457:CDS | 40.0% |
| ! | TGTTGGCGCTGTTTCATATA+TGG | - | chr6.3:79343373-79343392 | MS.gene63457:intron | 40.0% |
| !! | AAAGGCACACCTTCGTTTTT+CGG | + | chr6.3:79343470-79343489 | None:intergenic | 40.0% |
| !! | CTCTTTGAAGCATAGGCTTA+TGG | - | chr6.3:79342562-79342581 | MS.gene63457:intron | 40.0% |
| !! | GTGTTCGTTTTTCCCAATGA+TGG | - | chr6.3:79340709-79340728 | MS.gene63457:intron | 40.0% |
| !! | TACCCCTTTAAAGTCTTCTG+TGG | - | chr6.3:79341184-79341203 | MS.gene63457:intron | 40.0% |
| !! | TTTTTCGGCACAAAGCTTTC+TGG | + | chr6.3:79343455-79343474 | None:intergenic | 40.0% |
| !!! | TTTGCTTTTTTCCTTGCGCA+TGG | - | chr6.3:79339850-79339869 | MS.gene63457:intron | 40.0% |
| AAGGAATGTGAAGAGGAAGC+AGG | - | chr6.3:79342964-79342983 | MS.gene63457:intron | 45.0% | |
| AATACCTCGTTCCGTATACC+TGG | + | chr6.3:79340841-79340860 | None:intergenic | 45.0% | |
| ACACTACTAGAAAGGAGACG+AGG | + | chr6.3:79343518-79343537 | None:intergenic | 45.0% | |
| AGAAATACCCGTGTCGAAAC+AGG | + | chr6.3:79343688-79343707 | None:intergenic | 45.0% | |
| AGATCAACAACCCAAGCACA+AGG | + | chr6.3:79340198-79340217 | None:intergenic | 45.0% | |
| CACACGAAATCCACATATCC+TGG | - | chr6.3:79342649-79342668 | MS.gene63457:intron | 45.0% | |
| CCAGAGTCCATTGTTTCACT+TGG | + | chr6.3:79341836-79341855 | None:intergenic | 45.0% | |
| CGACGGGGATAGATACAAAA+GGG | - | chr6.3:79343400-79343419 | MS.gene63457:intron | 45.0% | |
| CTAAAGGAGGAGAAGGATGA+AGG | + | chr6.3:79343034-79343053 | None:intergenic | 45.0% | |
| CTTGATCATCTAGTTGCAGG+AGG | - | chr6.3:79342676-79342695 | MS.gene63457:intron | 45.0% | |
| GACTTCTCTTCGCTATCCAT+AGG | + | chr6.3:79342630-79342649 | None:intergenic | 45.0% | |
| GAGTGTTTGTGAAGTTCCAG+AGG | - | chr6.3:79341706-79341725 | MS.gene63457:intron | 45.0% | |
| GCTCTCTCATTCTGTTTCCT+TGG | - | chr6.3:79339693-79339712 | MS.gene63457:CDS | 45.0% | |
| GCTTATGGAGTCCATATGAG+TGG | - | chr6.3:79342577-79342596 | MS.gene63457:intron | 45.0% | |
| GTCGATGCCCAAATCAAATG+AGG | + | chr6.3:79341462-79341481 | None:intergenic | 45.0% | |
| TAGCTCGCATCCTTACAATC+TGG | + | chr6.3:79339943-79339962 | None:intergenic | 45.0% | |
| TATTCCAGGTATACGGAACG+AGG | - | chr6.3:79340834-79340853 | MS.gene63457:intron | 45.0% | |
| TCCAGAAAAGCTCTCTCACA+TGG | + | chr6.3:79341779-79341798 | None:intergenic | 45.0% | |
| TCGACGGGGATAGATACAAA+AGG | - | chr6.3:79343399-79343418 | MS.gene63457:intron | 45.0% | |
| TCTTGCAGAGCTAAACCTGT+TGG | - | chr6.3:79343356-79343375 | MS.gene63457:CDS | 45.0% | |
| TGCTTATATACGTGACCGGA+GGG | + | chr6.3:79341095-79341114 | None:intergenic | 45.0% | |
| TGTAATCGAGCATTTGGGAG+AGG | - | chr6.3:79340807-79340826 | MS.gene63457:intron | 45.0% | |
| TTGACTTCCTGTTTCGACAC+GGG | - | chr6.3:79343678-79343697 | MS.gene63457:intron | 45.0% | |
| TTGCTTATATACGTGACCGG+AGG | + | chr6.3:79341096-79341115 | None:intergenic | 45.0% | |
| TTGTGCACTAAAGGAGGAGA+AGG | + | chr6.3:79343041-79343060 | None:intergenic | 45.0% | |
| ! | AGCTTTGTGCCGAAAAACGA+AGG | - | chr6.3:79343458-79343477 | MS.gene63457:intron | 45.0% |
| ! | AGTTTTCTTGTCGGCAGTGT+TGG | - | chr6.3:79339731-79339750 | MS.gene63457:intron | 45.0% |
| ! | CCAAGTGAAACAATGGACTC+TGG | - | chr6.3:79341833-79341852 | MS.gene63457:intron | 45.0% |
| ! | TAACACCACTGAGAAGCACA+TGG | + | chr6.3:79343769-79343788 | None:intergenic | 45.0% |
| !! | CTAAAGTGTCGGTGCTACAT+AGG | + | chr6.3:79343097-79343116 | None:intergenic | 45.0% |
| ACCAAAGGGGCTTCCATCAT+TGG | + | chr6.3:79340725-79340744 | None:intergenic | 50.0% | |
| ACGTCGCCCTCAATGACAAA+TGG | + | chr6.3:79340533-79340552 | None:intergenic | 50.0% | |
| AGGACTTCACAGGGTATAGC+TGG | + | chr6.3:79340961-79340980 | None:intergenic | 50.0% | |
| CCAAAGGGGCTTCCATCATT+GGG | + | chr6.3:79340724-79340743 | None:intergenic | 50.0% | |
| CCTTGCCTATTCTCACGTGA+GGG | - | chr6.3:79342038-79342057 | MS.gene63457:intron | 50.0% | |
| CGTGAGAATAGGCAAGGCAT+TGG | + | chr6.3:79342035-79342054 | None:intergenic | 50.0% | |
| CTTCCAGATTGCATGACCTC+TGG | + | chr6.3:79341725-79341744 | None:intergenic | 50.0% | |
| CTTGCCTATTCTCACGTGAG+GGG | - | chr6.3:79342039-79342058 | MS.gene63457:intron | 50.0% | |
| GAAGACTCACTTGATGGGGA+TGG | - | chr6.3:79341515-79341534 | MS.gene63457:intron | 50.0% | |
| GATTACATAGCCAAGTGCGC+TGG | + | chr6.3:79340794-79340813 | None:intergenic | 50.0% | |
| GCAGTACATACTACACCCTC+CGG | + | chr6.3:79342249-79342268 | None:intergenic | 50.0% | |
| GCCGCATGGAATTGATTGTC+AGG | - | chr6.3:79342930-79342949 | MS.gene63457:intron | 50.0% | |
| GTTCCAGAGGTCATGCAATC+TGG | - | chr6.3:79341719-79341738 | MS.gene63457:intron | 50.0% | |
| TAACACCAATGTCGGCGTGT+CGG | - | chr6.3:79343191-79343210 | MS.gene63457:CDS | 50.0% | |
| TCATCTAGTTGCAGGAGGAC+TGG | - | chr6.3:79342681-79342700 | MS.gene63457:intron | 50.0% | |
| TCCATTGCTGAAGACAGCTG+AGG | - | chr6.3:79340762-79340781 | MS.gene63457:intron | 50.0% | |
| TCCTCAGCTGTCTTCAGCAA+TGG | + | chr6.3:79340766-79340785 | None:intergenic | 50.0% | |
| TGAACTCTCAGAGAAGCCTG+CGG | - | chr6.3:79340427-79340446 | MS.gene63457:CDS | 50.0% | |
| TTGAGCCATGTGCTTCTCAG+TGG | - | chr6.3:79343761-79343780 | MS.gene63457:CDS | 50.0% | |
| TTGCCTATTCTCACGTGAGG+GGG | - | chr6.3:79342040-79342059 | MS.gene63457:intron | 50.0% | |
| ! | GCCATGTGAGAGAGCTTTTC+TGG | - | chr6.3:79341775-79341794 | MS.gene63457:intron | 50.0% |
| ! | TTGGGAGAGGAGCATATTCC+AGG | - | chr6.3:79340820-79340839 | MS.gene63457:intron | 50.0% |
| !! | CGTGCTGCAGCTCCTTATTT+TGG | - | chr6.3:79341013-79341032 | MS.gene63457:intron | 50.0% |
| !! | TAGATGGGCAGAAGCACCTA+TGG | - | chr6.3:79342611-79342630 | MS.gene63457:intron | 50.0% |
| !!! | CTGGTGCTACCGTACTTTTC+TGG | - | chr6.3:79343968-79343987 | MS.gene63457:CDS | 50.0% |
| AAGAGGAAGCAGGAATCCCC+AGG | - | chr6.3:79342974-79342993 | MS.gene63457:intron | 55.0% | |
| ACCCAAGCACAAGGCATGCA+CGG | + | chr6.3:79340189-79340208 | None:intergenic | 55.0% | |
| CCCTCACGTGAGAATAGGCA+AGG | + | chr6.3:79342041-79342060 | None:intergenic | 55.0% | |
| GAACTCTCAGAGAAGCCTGC+GGG | - | chr6.3:79340428-79340447 | MS.gene63457:CDS | 55.0% | |
| GAGGAAAGAACCAGCGCACT+TGG | - | chr6.3:79340781-79340800 | MS.gene63457:intron | 55.0% | |
| GCCTTGCCTATTCTCACGTG+AGG | - | chr6.3:79342037-79342056 | MS.gene63457:intron | 55.0% | |
| GTCATTGAGGGCGACGTTGT+TGG | - | chr6.3:79340536-79340555 | MS.gene63457:intron | 55.0% | |
| TGCCTATTCTCACGTGAGGG+GGG | - | chr6.3:79342041-79342060 | MS.gene63457:intron | 55.0% | |
| TTCCCCCCTCACGTGAGAAT+AGG | + | chr6.3:79342046-79342065 | None:intergenic | 55.0% | |
| TTGCTACTGTTGCAGCCGCA+TGG | - | chr6.3:79342916-79342935 | MS.gene63457:intron | 55.0% | |
| ! | AGAAGGGTTGGCAGCAGTGA+AGG | - | chr6.3:79339912-79339931 | MS.gene63457:intron | 55.0% |
| ! | CCCAATGATGGAAGCCCCTT+TGG | - | chr6.3:79340721-79340740 | MS.gene63457:intron | 55.0% |
| AGACACCGACACGCCGACAT+TGG | + | chr6.3:79343199-79343218 | None:intergenic | 60.0% | |
| CCCAAGCACAAGGCATGCAC+GGG | + | chr6.3:79340188-79340207 | None:intergenic | 60.0% | |
| CCCGTGCATGCCTTGTGCTT+GGG | - | chr6.3:79340185-79340204 | MS.gene63457:intron | 60.0% | |
| TCCCGTGCATGCCTTGTGCT+TGG | - | chr6.3:79340184-79340203 | MS.gene63457:intron | 60.0% | |
| !! | GTGAGAGTGTCGGGGTGGGT+TGG | - | chr6.3:79339659-79339678 | MS.gene63457:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 79339656 | 79344238 | 79339656 | ID=MS.gene63457 |
| chr6.3 | mRNA | 79339656 | 79344238 | 79339656 | ID=MS.gene63457.t1;Parent=MS.gene63457 |
| chr6.3 | exon | 79344180 | 79344238 | 79344180 | ID=MS.gene63457.t1.exon1;Parent=MS.gene63457.t1 |
| chr6.3 | CDS | 79344180 | 79344238 | 79344180 | ID=cds.MS.gene63457.t1;Parent=MS.gene63457.t1 |
| chr6.3 | exon | 79343948 | 79343995 | 79343948 | ID=MS.gene63457.t1.exon2;Parent=MS.gene63457.t1 |
| chr6.3 | CDS | 79343948 | 79343995 | 79343948 | ID=cds.MS.gene63457.t1;Parent=MS.gene63457.t1 |
| chr6.3 | exon | 79343740 | 79343806 | 79343740 | ID=MS.gene63457.t1.exon3;Parent=MS.gene63457.t1 |
| chr6.3 | CDS | 79343740 | 79343806 | 79343740 | ID=cds.MS.gene63457.t1;Parent=MS.gene63457.t1 |
| chr6.3 | exon | 79343321 | 79343385 | 79343321 | ID=MS.gene63457.t1.exon4;Parent=MS.gene63457.t1 |
| chr6.3 | CDS | 79343321 | 79343385 | 79343321 | ID=cds.MS.gene63457.t1;Parent=MS.gene63457.t1 |
| chr6.3 | exon | 79343039 | 79343216 | 79343039 | ID=MS.gene63457.t1.exon5;Parent=MS.gene63457.t1 |
| chr6.3 | CDS | 79343039 | 79343216 | 79343039 | ID=cds.MS.gene63457.t1;Parent=MS.gene63457.t1 |
| chr6.3 | exon | 79342852 | 79342932 | 79342852 | ID=MS.gene63457.t1.exon6;Parent=MS.gene63457.t1 |
| chr6.3 | CDS | 79342852 | 79342932 | 79342852 | ID=cds.MS.gene63457.t1;Parent=MS.gene63457.t1 |
| chr6.3 | exon | 79341192 | 79341317 | 79341192 | ID=MS.gene63457.t1.exon7;Parent=MS.gene63457.t1 |
| chr6.3 | CDS | 79341192 | 79341317 | 79341192 | ID=cds.MS.gene63457.t1;Parent=MS.gene63457.t1 |
| chr6.3 | exon | 79340884 | 79340963 | 79340884 | ID=MS.gene63457.t1.exon8;Parent=MS.gene63457.t1 |
| chr6.3 | CDS | 79340884 | 79340963 | 79340884 | ID=cds.MS.gene63457.t1;Parent=MS.gene63457.t1 |
| chr6.3 | exon | 79340415 | 79340530 | 79340415 | ID=MS.gene63457.t1.exon9;Parent=MS.gene63457.t1 |
| chr6.3 | CDS | 79340415 | 79340530 | 79340415 | ID=cds.MS.gene63457.t1;Parent=MS.gene63457.t1 |
| chr6.3 | exon | 79340195 | 79340315 | 79340195 | ID=MS.gene63457.t1.exon10;Parent=MS.gene63457.t1 |
| chr6.3 | CDS | 79340195 | 79340315 | 79340195 | ID=cds.MS.gene63457.t1;Parent=MS.gene63457.t1 |
| chr6.3 | exon | 79339656 | 79339725 | 79339656 | ID=MS.gene63457.t1.exon11;Parent=MS.gene63457.t1 |
| chr6.3 | CDS | 79339656 | 79339725 | 79339656 | ID=cds.MS.gene63457.t1;Parent=MS.gene63457.t1 |
| Gene Sequence |
| Protein sequence |
