Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63520.t1 | XP_013458835.1 | 96.9 | 804 | 25 | 0 | 1 | 804 | 1 | 804 | 0.00E+00 | 1584.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63520.t1 | Q9SJ20 | 81.1 | 816 | 142 | 2 | 1 | 804 | 1 | 816 | 0.0e+00 | 1377.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63520.t1 | A0A072UTF3 | 96.9 | 804 | 25 | 0 | 1 | 804 | 1 | 804 | 0.0e+00 | 1584.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene020558 | MS.gene63520 | PPI |
| MS.gene63520 | MS.gene92155 | PPI |
| MS.gene63520 | MS.gene073967 | PPI |
| MS.gene039012 | MS.gene63520 | PPI |
| MS.gene77617 | MS.gene63520 | PPI |
| MS.gene007306 | MS.gene63520 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63520.t1 | MTR_3g009480 | 96.891 | 804 | 25 | 0 | 1 | 804 | 1 | 804 | 0.0 | 1642 |
| MS.gene63520.t1 | MTR_8g092510 | 93.742 | 815 | 37 | 2 | 1 | 804 | 1 | 812 | 0.0 | 1604 |
| MS.gene63520.t1 | MTR_8g092500 | 84.483 | 58 | 9 | 0 | 42 | 99 | 12 | 69 | 2.66e-26 | 105 |
| MS.gene63520.t1 | MTR_8g092500 | 76.786 | 56 | 13 | 0 | 203 | 258 | 69 | 124 | 1.69e-20 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63520.t1 | AT2G21790 | 81.127 | 816 | 142 | 2 | 1 | 804 | 1 | 816 | 0.0 | 1426 |
Find 191 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGATATATTTGACTTCT+TGG | 0.169061 | 3.3:-4752541 | MS.gene63520:CDS |
| TTGGGTGCCTGATCTCTTTA+TGG | 0.175397 | 3.3:-4752460 | MS.gene63520:CDS |
| CACCTTAGGTTGATCTTTAA+TGG | 0.183983 | 3.3:+4751132 | None:intergenic |
| TCAACAGATAAGACCTTTCT+AGG | 0.221939 | 3.3:+4753006 | None:intergenic |
| GACCTTTCTGCAGTTTCAAC+TGG | 0.230257 | 3.3:+4751940 | None:intergenic |
| GCAAAAGATATTGGTTAATA+TGG | 0.246409 | 3.3:-4751338 | MS.gene63520:CDS |
| TCAGTTGAGTAGTTGCTTCT+TGG | 0.254873 | 3.3:-4752817 | MS.gene63520:CDS |
| GAAAATTACGGATGCATAAT+CGG | 0.257386 | 3.3:+4753456 | None:intergenic |
| GTGGGATTGGGGTGCACTTC+GGG | 0.263837 | 3.3:-4751665 | MS.gene63520:CDS |
| TGAAGAATTCCCTTGCTTAC+AGG | 0.276160 | 3.3:+4751721 | None:intergenic |
| ACCTGGTTTGGCAGATTGTT+GGG | 0.280285 | 3.3:-4752388 | MS.gene63520:CDS |
| ACCCATTGGTATTGGAGTTC+AGG | 0.293692 | 3.3:-4751902 | MS.gene63520:CDS |
| TCCCTCCAATTTGTGGGATT+GGG | 0.296736 | 3.3:-4751677 | MS.gene63520:CDS |
| CTCCCTCCAATTTGTGGGAT+TGG | 0.303419 | 3.3:-4751678 | MS.gene63520:CDS |
| TCTTCACGATTTGACTGAAA+TGG | 0.304516 | 3.3:-4751476 | MS.gene63520:CDS |
| GGAGATCAAGCAAAAGATAT+TGG | 0.315716 | 3.3:-4751347 | MS.gene63520:CDS |
| TCTCTGTTGGACTTGTATAC+TGG | 0.324501 | 3.3:+4752157 | None:intergenic |
| GAAAAGCAACCAGCAGAATC+TGG | 0.327390 | 3.3:-4752217 | MS.gene63520:CDS |
| GTGCTTCATTGGGGCAGAAC+AGG | 0.346214 | 3.3:+4752409 | None:intergenic |
| CGGCACAGACCCATTGGTAT+TGG | 0.349426 | 3.3:-4751910 | MS.gene63520:CDS |
| TGCACCCCAATCCCACAAAT+TGG | 0.350482 | 3.3:+4751672 | None:intergenic |
| ACTTTCTGAGCGACTAAAAC+AGG | 0.353727 | 3.3:+4753565 | None:intergenic |
| TCATCTTCCTCCTTCACCTT+AGG | 0.364423 | 3.3:+4751118 | None:intergenic |
| CACCTGGTTTGGCAGATTGT+TGG | 0.366008 | 3.3:-4752389 | MS.gene63520:CDS |
| GCCAAACCAGGTGCTTCATT+GGG | 0.366941 | 3.3:+4752399 | None:intergenic |
| TTGAAGTCACAGATAGAAAC+TGG | 0.367181 | 3.3:-4752276 | MS.gene63520:CDS |
| CTTCACGATTTGACTGAAAT+GGG | 0.371085 | 3.3:-4751475 | MS.gene63520:CDS |
| GTTTGCGCCGGCGTTTATAA+AGG | 0.372735 | 3.3:-4753544 | MS.gene63520:CDS |
| TTGTTTAACTGTTGAGCCTC+TGG | 0.375695 | 3.3:+4751835 | None:intergenic |
| ACTACCGCTATAAGTTTCAT+AGG | 0.377693 | 3.3:+4751744 | None:intergenic |
| TGCCAAACCAGGTGCTTCAT+TGG | 0.378584 | 3.3:+4752398 | None:intergenic |
| GCATCTACCAGTCAAATTCT+TGG | 0.379695 | 3.3:-4751586 | MS.gene63520:CDS |
| TTGTAGATATTAGAAGTATA+TGG | 0.388878 | 3.3:+4751544 | None:intergenic |
| CCCCAATGAAGCACCTGGTT+TGG | 0.394351 | 3.3:-4752400 | MS.gene63520:CDS |
| AAGTCATATACAAAACTGTT+TGG | 0.399108 | 3.3:-4751369 | MS.gene63520:CDS |
| TGGTCAAAGGGTTTGAAGAC+TGG | 0.404567 | 3.3:-4751217 | MS.gene63520:CDS |
| CATGAAGAATGCGGCTCGAT+TGG | 0.412162 | 3.3:-4753084 | MS.gene63520:CDS |
| TACTGCACGTTATGTTGATC+AGG | 0.416179 | 3.3:-4752613 | MS.gene63520:CDS |
| CCCATTGGTATTGGAGTTCA+GGG | 0.416868 | 3.3:-4751901 | MS.gene63520:CDS |
| AAAATTACGGATGCATAATC+GGG | 0.422737 | 3.3:+4753457 | None:intergenic |
| AGTCATATACAAAACTGTTT+GGG | 0.426393 | 3.3:-4751368 | MS.gene63520:CDS |
| CTTCTTAACAGTTTCAGAAA+AGG | 0.427555 | 3.3:+4753145 | None:intergenic |
| TGTGACTCCCTCCAATTTGT+GGG | 0.428684 | 3.3:-4751683 | MS.gene63520:CDS |
| TCTTATCTGTTGAAAGTTGA+AGG | 0.434852 | 3.3:-4752996 | MS.gene63520:CDS |
| CAACTGAGGCCTAGGTGTTC+CGG | 0.436745 | 3.3:+4752833 | None:intergenic |
| TGCCCGTAGTAGTTACATTC+GGG | 0.442251 | 3.3:-4752688 | MS.gene63520:CDS |
| GGAACAAATGGAACGTCTAA+TGG | 0.447356 | 3.3:-4752666 | MS.gene63520:CDS |
| CTCATCAGTCTAAGCTTGTT+GGG | 0.451276 | 3.3:-4752065 | MS.gene63520:CDS |
| CCCTCCAATTTGTGGGATTG+GGG | 0.452935 | 3.3:-4751676 | MS.gene63520:CDS |
| TCTCATCAGTCTAAGCTTGT+TGG | 0.453961 | 3.3:-4752066 | MS.gene63520:CDS |
| CTTCTTGGTTTGCATGAAAG+AGG | 0.454593 | 3.3:-4752802 | MS.gene63520:CDS |
| AGTAAATCTGCTGGAGGGAT+TGG | 0.455606 | 3.3:-4752732 | MS.gene63520:CDS |
| TTGGAATTGAAAATAAATCA+TGG | 0.459190 | 3.3:-4752522 | MS.gene63520:CDS |
| AGTTACATTCGGGGAACAAA+TGG | 0.459366 | 3.3:-4752678 | MS.gene63520:CDS |
| TGGTAGATGCAGTTGGCATA+GGG | 0.460342 | 3.3:+4751599 | None:intergenic |
| ACTGTGGAATCCTGCACTTA+AGG | 0.461877 | 3.3:-4751452 | MS.gene63520:CDS |
| GTGTGACTCCCTCCAATTTG+TGG | 0.463050 | 3.3:-4751684 | MS.gene63520:CDS |
| GGGGATTTATGATACATTGA+AGG | 0.466284 | 3.3:-4752769 | MS.gene63520:CDS |
| CATGAAAGAGGATAGTATTG+AGG | 0.467618 | 3.3:-4752790 | MS.gene63520:CDS |
| CATCACTTGCAGCTCGTGTT+CGG | 0.469357 | 3.3:+4751182 | None:intergenic |
| TTGGATTCAAAACCCTAGAA+AGG | 0.474503 | 3.3:-4753019 | MS.gene63520:CDS |
| TGTGGGATTGGGGTGCACTT+CGG | 0.478406 | 3.3:-4751666 | MS.gene63520:CDS |
| CTGGTAGATGCAGTTGGCAT+AGG | 0.486502 | 3.3:+4751598 | None:intergenic |
| TGTGAATTAGCTGCAAAAGA+AGG | 0.487389 | 3.3:-4751769 | MS.gene63520:CDS |
| GACCTCAACATATGATAATG+AGG | 0.490912 | 3.3:-4752959 | MS.gene63520:CDS |
| GCACACCATCTGTGCCATCT+TGG | 0.493955 | 3.3:+4751072 | None:intergenic |
| GAGCTCGGAGCGATGGGGAA+TGG | 0.495090 | 3.3:-4752434 | MS.gene63520:CDS |
| AGGTTGATCTTTAATGGCAG+AGG | 0.497296 | 3.3:+4751138 | None:intergenic |
| GGTCAAAGGGTTTGAAGACT+GGG | 0.500162 | 3.3:-4751216 | MS.gene63520:CDS |
| TTGCTGTGTACTTGGAGCCA+TGG | 0.501413 | 3.3:-4752566 | MS.gene63520:CDS |
| GGTGTCAACAGTGAACTTGA+TGG | 0.501706 | 3.3:+4751159 | None:intergenic |
| TGGAAAGAGCTCGGAGCGAT+GGG | 0.504046 | 3.3:-4752440 | MS.gene63520:CDS |
| TGTTGATTCAGTTGGCTGGT+AGG | 0.505376 | 3.3:-4753205 | MS.gene63520:intron |
| CTACCGCTATAAGTTTCATA+GGG | 0.506721 | 3.3:+4751745 | None:intergenic |
| CCCTGAACTCCAATACCAAT+GGG | 0.507374 | 3.3:+4751901 | None:intergenic |
| TAATTGTGCCCAGATTCTGC+TGG | 0.508224 | 3.3:+4752208 | None:intergenic |
| GGTTCGTTTCGACAAGATAA+CGG | 0.508783 | 3.3:-4753635 | MS.gene63520:CDS |
| ATGGAAAGAGCTCGGAGCGA+TGG | 0.509824 | 3.3:-4752441 | MS.gene63520:CDS |
| GGAGTCACACCCCACATGTC+AGG | 0.510046 | 3.3:+4751697 | None:intergenic |
| TGCATAATCGGGGTGGTTAG+CGG | 0.511312 | 3.3:+4753468 | None:intergenic |
| GTGCCCGTAGTAGTTACATT+CGG | 0.511377 | 3.3:-4752689 | MS.gene63520:CDS |
| TTCTGCCCCAATGAAGCACC+TGG | 0.511533 | 3.3:-4752405 | MS.gene63520:CDS |
| ATGATAATGAGGGTTTCTGT+TGG | 0.513641 | 3.3:-4752948 | MS.gene63520:CDS |
| ATGAAAGAGGATAGTATTGA+GGG | 0.520773 | 3.3:-4752789 | MS.gene63520:CDS |
| CAACTACTCAACTGAGGCCT+AGG | 0.520856 | 3.3:+4752825 | None:intergenic |
| GCTCTTTCCATAAAGAGATC+AGG | 0.521910 | 3.3:+4752453 | None:intergenic |
| TCCCCGAATGTAACTACTAC+GGG | 0.524669 | 3.3:+4752686 | None:intergenic |
| GTTATTGCCAAGAATTTGAC+TGG | 0.525519 | 3.3:+4751579 | None:intergenic |
| ATAATCTTATCCTTAAGTGC+AGG | 0.526709 | 3.3:+4751442 | None:intergenic |
| ACCTTTCTGCAGTTTCAACT+GGG | 0.529840 | 3.3:+4751941 | None:intergenic |
| CCTGGTTTGGCAGATTGTTG+GGG | 0.532035 | 3.3:-4752387 | MS.gene63520:CDS |
| AAAAGCAACCAGCAGAATCT+GGG | 0.538023 | 3.3:-4752216 | MS.gene63520:CDS |
| TGCCATTCCTAGTAGTATGA+AGG | 0.541047 | 3.3:+4751867 | None:intergenic |
| TTCCCCGAATGTAACTACTA+CGG | 0.541676 | 3.3:+4752685 | None:intergenic |
| TCATTGAACACACGAAGCAT+TGG | 0.544001 | 3.3:+4752636 | None:intergenic |
| TCTAAGCTTGTTGGGAGCAG+AGG | 0.544709 | 3.3:-4752057 | MS.gene63520:CDS |
| GCTGATACCTTCATACTACT+AGG | 0.545879 | 3.3:-4751874 | MS.gene63520:CDS |
| AACTTGCGGCACAGACCCAT+TGG | 0.547601 | 3.3:-4751916 | MS.gene63520:CDS |
| AGGTTGAAGAAACTCAGTTA+CGG | 0.550367 | 3.3:-4753610 | MS.gene63520:CDS |
| CAACAGATAAGACCTTTCTA+GGG | 0.552426 | 3.3:+4753007 | None:intergenic |
| TTACACACAGCAGTCTCTGT+TGG | 0.552651 | 3.3:+4752144 | None:intergenic |
| GGAAGATGATGCTGAGAATG+AGG | 0.556546 | 3.3:-4751104 | MS.gene63520:CDS |
| TGATGCTGAGAATGAGGATG+AGG | 0.557893 | 3.3:-4751098 | MS.gene63520:CDS |
| CATGCCGGCGGCAGTTTCAG+CGG | 0.558215 | 3.3:+4753492 | None:intergenic |
| GCTGTCATTAGTAAATCTGC+TGG | 0.558625 | 3.3:-4752741 | MS.gene63520:CDS |
| GGTGTAGTTTCAACTTCCAC+AGG | 0.558913 | 3.3:+4751021 | None:intergenic |
| TTCTGAAACTGTTAAGAAGG+CGG | 0.559005 | 3.3:-4753141 | MS.gene63520:CDS |
| CCCCAACAATCTGCCAAACC+AGG | 0.559209 | 3.3:+4752387 | None:intergenic |
| ATCATTACATGTCTCAGAGA+TGG | 0.562165 | 3.3:-4752887 | MS.gene63520:CDS |
| ATTTGACTGGTAGATGCAGT+TGG | 0.562931 | 3.3:+4751592 | None:intergenic |
| AAAGAGATCAGGCACCCAAA+GGG | 0.564159 | 3.3:+4752464 | None:intergenic |
| TGCTTCATTGGGGCAGAACA+GGG | 0.566323 | 3.3:+4752410 | None:intergenic |
| GATAAGATTATCTATGACAA+TGG | 0.569436 | 3.3:-4751430 | MS.gene63520:CDS |
| TAGTGAGATAATCTACGATA+GGG | 0.569945 | 3.3:-4753060 | MS.gene63520:CDS |
| TAGCGGTAGTCCTGTAAGCA+AGG | 0.570043 | 3.3:-4751731 | MS.gene63520:CDS |
| GGGGTGGTTAGCGGTCATGC+CGG | 0.571238 | 3.3:+4753477 | None:intergenic |
| TGATATCAAAGACGGGTGTA+CGG | 0.571641 | 3.3:-4751639 | MS.gene63520:CDS |
| AATTCTTCAGCCTGACATGT+GGG | 0.573350 | 3.3:-4751707 | MS.gene63520:CDS |
| ATTGAAAATAAATCATGGAA+AGG | 0.576131 | 3.3:-4752517 | MS.gene63520:CDS |
| TGCCATTAAAGATCAACCTA+AGG | 0.576576 | 3.3:-4751134 | MS.gene63520:CDS |
| ATCTCTTTATGGAAAGAGCT+CGG | 0.576641 | 3.3:-4752449 | MS.gene63520:CDS |
| ACCCCAATCCCACAAATTGG+AGG | 0.580755 | 3.3:+4751675 | None:intergenic |
| TAAAGATCAACCTAAGGTGA+AGG | 0.583231 | 3.3:-4751128 | MS.gene63520:CDS |
| ACCCTGAACTCCAATACCAA+TGG | 0.583702 | 3.3:+4751900 | None:intergenic |
| CACTTGCAGCTCGTGTTCGG+AGG | 0.584028 | 3.3:+4751185 | None:intergenic |
| ATAGTGAGATAATCTACGAT+AGG | 0.585463 | 3.3:-4753061 | MS.gene63520:CDS |
| GGATACCAAGATGGCACAGA+TGG | 0.590718 | 3.3:-4751077 | MS.gene63520:CDS |
| ACTGCACGTTATGTTGATCA+GGG | 0.592882 | 3.3:-4752612 | MS.gene63520:CDS |
| TCGGGAGATGATATCAAAGA+CGG | 0.597011 | 3.3:-4751647 | MS.gene63520:CDS |
| GTGGTTAGCGGTCATGCCGG+CGG | 0.600952 | 3.3:+4753480 | None:intergenic |
| GTCGCTCAGAAAGTTTGCGC+CGG | 0.602841 | 3.3:-4753556 | MS.gene63520:CDS |
| CCCCAATCCCACAAATTGGA+GGG | 0.603150 | 3.3:+4751676 | None:intergenic |
| AGAGATGAGTGTACGTCCTG+TGG | 0.603838 | 3.3:-4751037 | MS.gene63520:CDS |
| CCCTTATCTCTTACAAAACG+CGG | 0.604009 | 3.3:+4752102 | None:intergenic |
| TTAGACTGATGAGACTCCGC+AGG | 0.604324 | 3.3:+4752075 | None:intergenic |
| ACCCTCATTATCATATGTTG+AGG | 0.604412 | 3.3:+4752957 | None:intergenic |
| CGGGAGATGATATCAAAGAC+GGG | 0.605097 | 3.3:-4751646 | MS.gene63520:CDS |
| TACCTTCATACTACTAGGAA+TGG | 0.607015 | 3.3:-4751869 | MS.gene63520:CDS |
| AGATCAACCTAAGGTGAAGG+AGG | 0.607462 | 3.3:-4751125 | MS.gene63520:CDS |
| TGAAATTATCATGAAGAATG+CGG | 0.608901 | 3.3:-4753093 | MS.gene63520:CDS |
| TGACCAAGCATGAAAATGCA+AGG | 0.609918 | 3.3:+4751234 | None:intergenic |
| TAAAGAGATCAGGCACCCAA+AGG | 0.610062 | 3.3:+4752463 | None:intergenic |
| TGCACGTTATGTTGATCAGG+GGG | 0.610861 | 3.3:-4752610 | MS.gene63520:CDS |
| GAAGAGAGACGGTCGTCAAG+AGG | 0.611484 | 3.3:-4753659 | MS.gene63520:CDS |
| GAAAGTTGAAGGAGTGGTTG+TGG | 0.611890 | 3.3:-4752985 | MS.gene63520:CDS |
| TGAGGATGAGGATACCAAGA+TGG | 0.612000 | 3.3:-4751086 | MS.gene63520:CDS |
| GGAGCAGAGGCTCTAGTAGT+CGG | 0.613742 | 3.3:-4752044 | MS.gene63520:CDS |
| ACCCAGTTGAAACTGCAGAA+AGG | 0.616552 | 3.3:-4751942 | MS.gene63520:CDS |
| GTCATTAGTAAATCTGCTGG+AGG | 0.617415 | 3.3:-4752738 | MS.gene63520:CDS |
| GAATTCTTCAGCCTGACATG+TGG | 0.621173 | 3.3:-4751708 | MS.gene63520:CDS |
| ATTCTTCAGCCTGACATGTG+GGG | 0.624402 | 3.3:-4751706 | MS.gene63520:CDS |
| AGCGGTAGTCCTGTAAGCAA+GGG | 0.628820 | 3.3:-4751730 | MS.gene63520:CDS |
| AAGAGATAAGGGTTTGCCTG+CGG | 0.628967 | 3.3:-4752091 | MS.gene63520:CDS |
| TACAATCGCAGAGTGCTAAG+TGG | 0.632548 | 3.3:-4751526 | MS.gene63520:CDS |
| TCTGTTGAAAGTTGAAGGAG+TGG | 0.633162 | 3.3:-4752991 | MS.gene63520:CDS |
| ACCTCAACATATGATAATGA+GGG | 0.634892 | 3.3:-4752958 | MS.gene63520:CDS |
| CCAAACCAGGTGCTTCATTG+GGG | 0.636999 | 3.3:+4752400 | None:intergenic |
| CTTTCTGAGCGACTAAAACA+GGG | 0.637721 | 3.3:+4753566 | None:intergenic |
| TTATTCAAGCACGGACTCTG+TGG | 0.639505 | 3.3:-4752308 | MS.gene63520:CDS |
| CTGCAGAAAGGTCAAACTTG+CGG | 0.641053 | 3.3:-4751930 | MS.gene63520:CDS |
| ATGTACGTTGTGAAGAGAGA+CGG | 0.641716 | 3.3:-4753670 | MS.gene63520:CDS |
| GTTAATATGGCTGTTGATCG+AGG | 0.643154 | 3.3:-4751325 | MS.gene63520:CDS |
| GGCTAATTCATCAAGTTGAG+TGG | 0.644215 | 3.3:+4753513 | None:intergenic |
| GGTAGATGCAGTTGGCATAG+GGG | 0.644273 | 3.3:+4751600 | None:intergenic |
| TTAGCCGCTGAAACTGCCGC+CGG | 0.645122 | 3.3:-4753496 | MS.gene63520:CDS |
| ACTAGGAGAGGTTACTGCTG+TGG | 0.645274 | 3.3:-4752004 | MS.gene63520:CDS |
| TACACATCATCAGCAATCAA+CGG | 0.647516 | 3.3:+4753116 | None:intergenic |
| AAATCTGCACAAGAACACAC+TGG | 0.648777 | 3.3:-4753171 | MS.gene63520:CDS |
| GCGGTAGTGCAATTGATGCA+AGG | 0.653069 | 3.3:+4752121 | None:intergenic |
| GAGAGACGGTCGTCAAGAGG+CGG | 0.654678 | 3.3:-4753656 | MS.gene63520:CDS |
| TCAAATATATCAGCATGCCA+TGG | 0.655929 | 3.3:+4752549 | None:intergenic |
| TAATTCATCAAGTTGAGTGG+TGG | 0.658888 | 3.3:+4753516 | None:intergenic |
| GTTCCGGCGTTGAAAAGTGT+AGG | 0.659447 | 3.3:+4752849 | None:intergenic |
| AATGGCATTTGATTCACCAG+AGG | 0.671867 | 3.3:-4751851 | MS.gene63520:CDS |
| CTGCACGTTATGTTGATCAG+GGG | 0.673705 | 3.3:-4752611 | MS.gene63520:CDS |
| GGTGACGCCTTTATAAACGC+CGG | 0.677755 | 3.3:+4753537 | None:intergenic |
| TCATTAGTAAATCTGCTGGA+GGG | 0.679752 | 3.3:-4752737 | MS.gene63520:CDS |
| TCAAAGCTTAAATATACACA+TGG | 0.684728 | 3.3:-4751284 | MS.gene63520:CDS |
| GGAAAGAGCTCGGAGCGATG+GGG | 0.686822 | 3.3:-4752439 | MS.gene63520:CDS |
| TGAAAGAGGATAGTATTGAG+GGG | 0.695012 | 3.3:-4752788 | MS.gene63520:CDS |
| GGTTTCTGTTGGAATGCACA+AGG | 0.695791 | 3.3:-4752937 | MS.gene63520:CDS |
| GCCCGTAGTAGTTACATTCG+GGG | 0.699731 | 3.3:-4752687 | MS.gene63520:CDS |
| AAGAAGCAACTACTCAACTG+AGG | 0.702558 | 3.3:+4752819 | None:intergenic |
| GGCCCCTATGAAACTTATAG+CGG | 0.706024 | 3.3:-4751748 | MS.gene63520:CDS |
| ATTTGACTGAAATGGGACTG+TGG | 0.706027 | 3.3:-4751468 | MS.gene63520:CDS |
| AGAGGCTCAACAGTTAAACA+AGG | 0.706619 | 3.3:-4751833 | MS.gene63520:CDS |
| TTACGGATGCATAATCGGGG+TGG | 0.709619 | 3.3:+4753461 | None:intergenic |
| TACCGCTATAAGTTTCATAG+GGG | 0.734200 | 3.3:+4751746 | None:intergenic |
| AAATTACGGATGCATAATCG+GGG | 0.740153 | 3.3:+4753458 | None:intergenic |
| GCACGTTATGTTGATCAGGG+GGG | 0.745631 | 3.3:-4752609 | MS.gene63520:CDS |
| GTTTCGACAAGATAACGGCG+AGG | 0.762520 | 3.3:-4753630 | MS.gene63520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAATTATTTTATTAAGGT+TGG | + | chr3.3:4752728-4752747 | None:intergenic | 15.0% |
| !!! | TGACATCAATTATTTTATTA+AGG | + | chr3.3:4752732-4752751 | None:intergenic | 15.0% |
| !! | AACAACAAAAAATTCATCAT+CGG | + | chr3.3:4751306-4751325 | None:intergenic | 20.0% |
| !! | ATTGAAAATAAATCATGGAA+AGG | - | chr3.3:4752183-4752202 | MS.gene63520:CDS | 20.0% |
| !! | TTGGAATTGAAAATAAATCA+TGG | - | chr3.3:4752178-4752197 | MS.gene63520:CDS | 20.0% |
| !!! | GTTTTGTTTTTGAATTGTTT+TGG | - | chr3.3:4751468-4751487 | MS.gene63520:CDS | 20.0% |
| !!! | TATTTTGACTTTGAAAAACT+AGG | - | chr3.3:4752679-4752698 | MS.gene63520:CDS | 20.0% |
| !!! | TTGTAGATATTAGAAGTATA+TGG | + | chr3.3:4753159-4753178 | None:intergenic | 20.0% |
| ! | AAGTCATATACAAAACTGTT+TGG | - | chr3.3:4753331-4753350 | MS.gene63520:intron | 25.0% |
| ! | AGTCATATACAAAACTGTTT+GGG | - | chr3.3:4753332-4753351 | MS.gene63520:intron | 25.0% |
| ! | CAAAAAAGATTATTCAAGCA+CGG | - | chr3.3:4752383-4752402 | MS.gene63520:CDS | 25.0% |
| ! | GATAAGATTATCTATGACAA+TGG | - | chr3.3:4753270-4753289 | MS.gene63520:intron | 25.0% |
| ! | TCAAAGCTTAAATATACACA+TGG | - | chr3.3:4753416-4753435 | MS.gene63520:intron | 25.0% |
| ! | TGAAATTATCATGAAGAATG+CGG | - | chr3.3:4751607-4751626 | MS.gene63520:CDS | 25.0% |
| !! | GCAAAAGATATTGGTTAATA+TGG | - | chr3.3:4753362-4753381 | MS.gene63520:intron | 25.0% |
| !!! | AAATCCTTACATGCTTTTTA+AGG | - | chr3.3:4752447-4752466 | MS.gene63520:CDS | 25.0% |
| !!! | TTTTTAAGGATACTTGCAAT+AGG | - | chr3.3:4752461-4752480 | MS.gene63520:CDS | 25.0% |
| AAAAAAAGGCGGGAAAATTA+CGG | + | chr3.3:4751259-4751278 | None:intergenic | 30.0% | |
| AAAATTACGGATGCATAATC+GGG | + | chr3.3:4751246-4751265 | None:intergenic | 30.0% | |
| ATAATCTTATCCTTAAGTGC+AGG | + | chr3.3:4753261-4753280 | None:intergenic | 30.0% | |
| ATAGTGAGATAATCTACGAT+AGG | - | chr3.3:4751639-4751658 | MS.gene63520:CDS | 30.0% | |
| CGTTAAAGAACCCTAAAAAA+AGG | + | chr3.3:4751273-4751292 | None:intergenic | 30.0% | |
| CTTCTTAACAGTTTCAGAAA+AGG | + | chr3.3:4751558-4751577 | None:intergenic | 30.0% | |
| GAAAATTACGGATGCATAAT+CGG | + | chr3.3:4751247-4751266 | None:intergenic | 30.0% | |
| TAAAGAACCCTAAAAAAAGG+CGG | + | chr3.3:4751270-4751289 | None:intergenic | 30.0% | |
| TAGTGAGATAATCTACGATA+GGG | - | chr3.3:4751640-4751659 | MS.gene63520:CDS | 30.0% | |
| TCTTATCTGTTGAAAGTTGA+AGG | - | chr3.3:4751704-4751723 | MS.gene63520:CDS | 30.0% | |
| ! | ACCTCAACATATGATAATGA+GGG | - | chr3.3:4751742-4751761 | MS.gene63520:CDS | 30.0% |
| ! | ATGAAAGAGGATAGTATTGA+GGG | - | chr3.3:4751911-4751930 | MS.gene63520:CDS | 30.0% |
| ! | GTATCCTTAAAAAGCATGTA+AGG | + | chr3.3:4752454-4752473 | None:intergenic | 30.0% |
| ! | TAATTTTCCCGCCTTTTTTT+AGG | - | chr3.3:4751259-4751278 | MS.gene63520:CDS | 30.0% |
| ! | TGCTGATATATTTGACTTCT+TGG | - | chr3.3:4752159-4752178 | MS.gene63520:CDS | 30.0% |
| !! | AATTTTCCCGCCTTTTTTTA+GGG | - | chr3.3:4751260-4751279 | MS.gene63520:CDS | 30.0% |
| !!! | AGATTTATTTTACGCCCTTT+GGG | - | chr3.3:4752222-4752241 | MS.gene63520:CDS | 30.0% |
| !!! | CTTTTCTGAAACTGTTAAGA+AGG | - | chr3.3:4751556-4751575 | MS.gene63520:CDS | 30.0% |
| !!! | GATTTTGACTACGATTACTT+TGG | - | chr3.3:4751662-4751681 | MS.gene63520:CDS | 30.0% |
| !!! | TATATGACTTTTAGTTCAGC+AGG | + | chr3.3:4753321-4753340 | None:intergenic | 30.0% |
| !!! | TTGGATTTTGTTGATTCAGT+TGG | - | chr3.3:4751487-4751506 | MS.gene63520:CDS | 30.0% |
| AAAGAACCCTAAAAAAAGGC+GGG | + | chr3.3:4751269-4751288 | None:intergenic | 35.0% | |
| AAATTACGGATGCATAATCG+GGG | + | chr3.3:4751245-4751264 | None:intergenic | 35.0% | |
| AAGCAGAAGAACCCTAAAAA+AGG | + | chr3.3:4751411-4751430 | None:intergenic | 35.0% | |
| ACCCTCATTATCATATGTTG+AGG | + | chr3.3:4751746-4751765 | None:intergenic | 35.0% | |
| ACTACCGCTATAAGTTTCAT+AGG | + | chr3.3:4752959-4752978 | None:intergenic | 35.0% | |
| AGGTTGAAGAAACTCAGTTA+CGG | - | chr3.3:4751090-4751109 | MS.gene63520:CDS | 35.0% | |
| ATCATTACATGTCTCAGAGA+TGG | - | chr3.3:4751813-4751832 | MS.gene63520:CDS | 35.0% | |
| ATCTCTTTATGGAAAGAGCT+CGG | - | chr3.3:4752251-4752270 | MS.gene63520:CDS | 35.0% | |
| CAACAGATAAGACCTTTCTA+GGG | + | chr3.3:4751696-4751715 | None:intergenic | 35.0% | |
| CATGAAAGAGGATAGTATTG+AGG | - | chr3.3:4751910-4751929 | MS.gene63520:CDS | 35.0% | |
| CTACCGCTATAAGTTTCATA+GGG | + | chr3.3:4752958-4752977 | None:intergenic | 35.0% | |
| CTTCACGATTTGACTGAAAT+GGG | - | chr3.3:4753225-4753244 | MS.gene63520:intron | 35.0% | |
| GGAGATCAAGCAAAAGATAT+TGG | - | chr3.3:4753353-4753372 | MS.gene63520:intron | 35.0% | |
| GGGGATTTATGATACATTGA+AGG | - | chr3.3:4751931-4751950 | MS.gene63520:CDS | 35.0% | |
| GTTATTGCCAAGAATTTGAC+TGG | + | chr3.3:4753124-4753143 | None:intergenic | 35.0% | |
| TAAAGATCAACCTAAGGTGA+AGG | - | chr3.3:4753572-4753591 | MS.gene63520:CDS | 35.0% | |
| TACACATCATCAGCAATCAA+CGG | + | chr3.3:4751587-4751606 | None:intergenic | 35.0% | |
| TACACTCAGTATGAAAAAGC+AGG | - | chr3.3:4752355-4752374 | MS.gene63520:CDS | 35.0% | |
| TACCGCTATAAGTTTCATAG+GGG | + | chr3.3:4752957-4752976 | None:intergenic | 35.0% | |
| TACCTTCATACTACTAGGAA+TGG | - | chr3.3:4752831-4752850 | MS.gene63520:CDS | 35.0% | |
| TCAAATATATCAGCATGCCA+TGG | + | chr3.3:4752154-4752173 | None:intergenic | 35.0% | |
| TCAACAGATAAGACCTTTCT+AGG | + | chr3.3:4751697-4751716 | None:intergenic | 35.0% | |
| TCATTAGTAAATCTGCTGGA+GGG | - | chr3.3:4751963-4751982 | MS.gene63520:CDS | 35.0% | |
| TCTTCACGATTTGACTGAAA+TGG | - | chr3.3:4753224-4753243 | MS.gene63520:intron | 35.0% | |
| TGCCATTAAAGATCAACCTA+AGG | - | chr3.3:4753566-4753585 | MS.gene63520:CDS | 35.0% | |
| TGTGAATTAGCTGCAAAAGA+AGG | - | chr3.3:4752931-4752950 | MS.gene63520:CDS | 35.0% | |
| TTGAAGTCACAGATAGAAAC+TGG | - | chr3.3:4752424-4752443 | MS.gene63520:CDS | 35.0% | |
| TTGGATTCAAAACCCTAGAA+AGG | - | chr3.3:4751681-4751700 | MS.gene63520:CDS | 35.0% | |
| ! | ATGATAATGAGGGTTTCTGT+TGG | - | chr3.3:4751752-4751771 | MS.gene63520:CDS | 35.0% |
| ! | CAAGGAAGTAAGCTTTTGAT+TGG | + | chr3.3:4753451-4753470 | None:intergenic | 35.0% |
| ! | CATTTTCATGCTTGGTCAAA+GGG | - | chr3.3:4753471-4753490 | MS.gene63520:CDS | 35.0% |
| ! | GACCTCAACATATGATAATG+AGG | - | chr3.3:4751741-4751760 | MS.gene63520:CDS | 35.0% |
| ! | TGAAAGAGGATAGTATTGAG+GGG | - | chr3.3:4751912-4751931 | MS.gene63520:CDS | 35.0% |
| ! | TGACTTTGAAAAACTAGGAG+AGG | - | chr3.3:4752684-4752703 | MS.gene63520:CDS | 35.0% |
| !! | ATTCTTTAGGGTTTAGGGTT+AGG | - | chr3.3:4751369-4751388 | MS.gene63520:CDS | 35.0% |
| !! | CACCTTAGGTTGATCTTTAA+TGG | + | chr3.3:4753571-4753590 | None:intergenic | 35.0% |
| !! | CTAGGATTCTTTAGGGTTTA+GGG | - | chr3.3:4751364-4751383 | MS.gene63520:CDS | 35.0% |
| !! | GAAGTAAGCTTTTGATTGGT+GGG | + | chr3.3:4753447-4753466 | None:intergenic | 35.0% |
| !! | TAATTCATCAAGTTGAGTGG+TGG | + | chr3.3:4751187-4751206 | None:intergenic | 35.0% |
| !! | TTCTGAAACTGTTAAGAAGG+CGG | - | chr3.3:4751559-4751578 | MS.gene63520:CDS | 35.0% |
| !! | TTCTTTAGGGTTTAGGGTTA+GGG | - | chr3.3:4751370-4751389 | MS.gene63520:CDS | 35.0% |
| !!! | ATTTTGTTGATTCAGTTGGC+TGG | - | chr3.3:4751491-4751510 | MS.gene63520:CDS | 35.0% |
| !!! | CACAAGAAGTTTTAAGAGCA+TGG | + | chr3.3:4752915-4752934 | None:intergenic | 35.0% |
| !!! | GAGATTTATTTTACGCCCTT+TGG | - | chr3.3:4752221-4752240 | MS.gene63520:CDS | 35.0% |
| !!! | GATTTTATTGATTCGCTGCT+AGG | - | chr3.3:4751346-4751365 | MS.gene63520:CDS | 35.0% |
| AAAAGCAACCAGCAGAATCT+GGG | - | chr3.3:4752484-4752503 | MS.gene63520:CDS | 40.0% | |
| AAATCTGCACAAGAACACAC+TGG | - | chr3.3:4751529-4751548 | MS.gene63520:CDS | 40.0% | |
| AAGAAGCAACTACTCAACTG+AGG | + | chr3.3:4751884-4751903 | None:intergenic | 40.0% | |
| AATGGCATTTGATTCACCAG+AGG | - | chr3.3:4752849-4752868 | MS.gene63520:CDS | 40.0% | |
| AATTCTTCAGCCTGACATGT+GGG | - | chr3.3:4752993-4753012 | MS.gene63520:CDS | 40.0% | |
| ACCTTTCTGCAGTTTCAACT+GGG | + | chr3.3:4752762-4752781 | None:intergenic | 40.0% | |
| ACTGCACGTTATGTTGATCA+GGG | - | chr3.3:4752088-4752107 | MS.gene63520:CDS | 40.0% | |
| ACTTTCTGAGCGACTAAAAC+AGG | + | chr3.3:4751138-4751157 | None:intergenic | 40.0% | |
| AGAAGAACCCTAAAAAAGGC+GGG | + | chr3.3:4751407-4751426 | None:intergenic | 40.0% | |
| AGAGGCTCAACAGTTAAACA+AGG | - | chr3.3:4752867-4752886 | MS.gene63520:CDS | 40.0% | |
| AGTTACATTCGGGGAACAAA+TGG | - | chr3.3:4752022-4752041 | MS.gene63520:CDS | 40.0% | |
| ATGTACGTTGTGAAGAGAGA+CGG | - | chr3.3:4751030-4751049 | MS.gene63520:CDS | 40.0% | |
| ATTCGCTGCTAGGATTCTTT+AGG | - | chr3.3:4751356-4751375 | MS.gene63520:CDS | 40.0% | |
| ATTTGACTGAAATGGGACTG+TGG | - | chr3.3:4753232-4753251 | MS.gene63520:intron | 40.0% | |
| ATTTGACTGGTAGATGCAGT+TGG | + | chr3.3:4753111-4753130 | None:intergenic | 40.0% | |
| CAGAAGAACCCTAAAAAAGG+CGG | + | chr3.3:4751408-4751427 | None:intergenic | 40.0% | |
| CCCTTATCTCTTACAAAACG+CGG | + | chr3.3:4752601-4752620 | None:intergenic | 40.0% | |
| CTTTCTGAGCGACTAAAACA+GGG | + | chr3.3:4751137-4751156 | None:intergenic | 40.0% | |
| GCATCTACCAGTCAAATTCT+TGG | - | chr3.3:4753114-4753133 | MS.gene63520:CDS | 40.0% | |
| GCTCTTTCCATAAAGAGATC+AGG | + | chr3.3:4752250-4752269 | None:intergenic | 40.0% | |
| GCTGATACCTTCATACTACT+AGG | - | chr3.3:4752826-4752845 | MS.gene63520:CDS | 40.0% | |
| GCTGTCATTAGTAAATCTGC+TGG | - | chr3.3:4751959-4751978 | MS.gene63520:CDS | 40.0% | |
| GGAACAAATGGAACGTCTAA+TGG | - | chr3.3:4752034-4752053 | MS.gene63520:CDS | 40.0% | |
| GGTTCGTTTCGACAAGATAA+CGG | - | chr3.3:4751065-4751084 | MS.gene63520:CDS | 40.0% | |
| GTCATTAGTAAATCTGCTGG+AGG | - | chr3.3:4751962-4751981 | MS.gene63520:CDS | 40.0% | |
| GTTAATATGGCTGTTGATCG+AGG | - | chr3.3:4753375-4753394 | MS.gene63520:intron | 40.0% | |
| TACTGCACGTTATGTTGATC+AGG | - | chr3.3:4752087-4752106 | MS.gene63520:CDS | 40.0% | |
| TCAGTTGAGTAGTTGCTTCT+TGG | - | chr3.3:4751883-4751902 | MS.gene63520:CDS | 40.0% | |
| TCATTGAACACACGAAGCAT+TGG | + | chr3.3:4752067-4752086 | None:intergenic | 40.0% | |
| TCGGGAGATGATATCAAAGA+CGG | - | chr3.3:4753053-4753072 | MS.gene63520:CDS | 40.0% | |
| TCTCATCAGTCTAAGCTTGT+TGG | - | chr3.3:4752634-4752653 | MS.gene63520:CDS | 40.0% | |
| TCTCTGTTGGACTTGTATAC+TGG | + | chr3.3:4752546-4752565 | None:intergenic | 40.0% | |
| TCTGTTGAAAGTTGAAGGAG+TGG | - | chr3.3:4751709-4751728 | MS.gene63520:CDS | 40.0% | |
| TGAAGAATTCCCTTGCTTAC+AGG | + | chr3.3:4752982-4753001 | None:intergenic | 40.0% | |
| TGACCAAGCATGAAAATGCA+AGG | + | chr3.3:4753469-4753488 | None:intergenic | 40.0% | |
| TGATATCAAAGACGGGTGTA+CGG | - | chr3.3:4753061-4753080 | MS.gene63520:CDS | 40.0% | |
| TGCCATTCCTAGTAGTATGA+AGG | + | chr3.3:4752836-4752855 | None:intergenic | 40.0% | |
| TTCCCCGAATGTAACTACTA+CGG | + | chr3.3:4752018-4752037 | None:intergenic | 40.0% | |
| TTCGCTGCTAGGATTCTTTA+GGG | - | chr3.3:4751357-4751376 | MS.gene63520:CDS | 40.0% | |
| TTGTTTAACTGTTGAGCCTC+TGG | + | chr3.3:4752868-4752887 | None:intergenic | 40.0% | |
| ! | ACCGCGTTTTGTAAGAGATA+AGG | - | chr3.3:4752597-4752616 | MS.gene63520:CDS | 40.0% |
| ! | AGAGTTTTCCCGCCTTTTTT+AGG | - | chr3.3:4751396-4751415 | MS.gene63520:CDS | 40.0% |
| ! | AGGTTGATCTTTAATGGCAG+AGG | + | chr3.3:4753565-4753584 | None:intergenic | 40.0% |
| ! | CCGCGTTTTGTAAGAGATAA+GGG | - | chr3.3:4752598-4752617 | MS.gene63520:CDS | 40.0% |
| ! | CTCATCAGTCTAAGCTTGTT+GGG | - | chr3.3:4752635-4752654 | MS.gene63520:CDS | 40.0% |
| ! | CTTCCTTGCATTTTCATGCT+TGG | - | chr3.3:4753463-4753482 | MS.gene63520:intron | 40.0% |
| ! | GCATTTTCATGCTTGGTCAA+AGG | - | chr3.3:4753470-4753489 | MS.gene63520:CDS | 40.0% |
| !! | CTTCTTGGTTTGCATGAAAG+AGG | - | chr3.3:4751898-4751917 | MS.gene63520:CDS | 40.0% |
| !! | GAGTTTTCCCGCCTTTTTTA+GGG | - | chr3.3:4751397-4751416 | MS.gene63520:CDS | 40.0% |
| !! | GCTAGGATTCTTTAGGGTTT+AGG | - | chr3.3:4751363-4751382 | MS.gene63520:CDS | 40.0% |
| !! | GGAAGTAAGCTTTTGATTGG+TGG | + | chr3.3:4753448-4753467 | None:intergenic | 40.0% |
| !! | GGCTAATTCATCAAGTTGAG+TGG | + | chr3.3:4751190-4751209 | None:intergenic | 40.0% |
| AAAGAGATCAGGCACCCAAA+GGG | + | chr3.3:4752239-4752258 | None:intergenic | 45.0% | |
| AAGAGATAAGGGTTTGCCTG+CGG | - | chr3.3:4752609-4752628 | MS.gene63520:CDS | 45.0% | |
| ACCCAGTTGAAACTGCAGAA+AGG | - | chr3.3:4752758-4752777 | MS.gene63520:CDS | 45.0% | |
| ACCCTGAACTCCAATACCAA+TGG | + | chr3.3:4752803-4752822 | None:intergenic | 45.0% | |
| ACTGTGGAATCCTGCACTTA+AGG | - | chr3.3:4753248-4753267 | MS.gene63520:intron | 45.0% | |
| AGATCAACCTAAGGTGAAGG+AGG | - | chr3.3:4753575-4753594 | MS.gene63520:CDS | 45.0% | |
| AGTAAATCTGCTGGAGGGAT+TGG | - | chr3.3:4751968-4751987 | MS.gene63520:CDS | 45.0% | |
| ATTCTTCAGCCTGACATGTG+GGG | - | chr3.3:4752994-4753013 | MS.gene63520:CDS | 45.0% | |
| CCCTGAACTCCAATACCAAT+GGG | + | chr3.3:4752802-4752821 | None:intergenic | 45.0% | |
| CGGGAGATGATATCAAAGAC+GGG | - | chr3.3:4753054-4753073 | MS.gene63520:CDS | 45.0% | |
| CTGCACGTTATGTTGATCAG+GGG | - | chr3.3:4752089-4752108 | MS.gene63520:CDS | 45.0% | |
| CTGCAGAAAGGTCAAACTTG+CGG | - | chr3.3:4752770-4752789 | MS.gene63520:CDS | 45.0% | |
| GAAAAGCAACCAGCAGAATC+TGG | - | chr3.3:4752483-4752502 | MS.gene63520:CDS | 45.0% | |
| GAAAGTTGAAGGAGTGGTTG+TGG | - | chr3.3:4751715-4751734 | MS.gene63520:CDS | 45.0% | |
| GAATTCTTCAGCCTGACATG+TGG | - | chr3.3:4752992-4753011 | MS.gene63520:CDS | 45.0% | |
| GACCTTTCTGCAGTTTCAAC+TGG | + | chr3.3:4752763-4752782 | None:intergenic | 45.0% | |
| GGAAGATGATGCTGAGAATG+AGG | - | chr3.3:4753596-4753615 | MS.gene63520:CDS | 45.0% | |
| GGCCCCTATGAAACTTATAG+CGG | - | chr3.3:4752952-4752971 | MS.gene63520:CDS | 45.0% | |
| GGTCAAAGGGTTTGAAGACT+GGG | - | chr3.3:4753484-4753503 | MS.gene63520:CDS | 45.0% | |
| GGTGTCAACAGTGAACTTGA+TGG | + | chr3.3:4753544-4753563 | None:intergenic | 45.0% | |
| GGTTTCTGTTGGAATGCACA+AGG | - | chr3.3:4751763-4751782 | MS.gene63520:CDS | 45.0% | |
| GTGCCCGTAGTAGTTACATT+CGG | - | chr3.3:4752011-4752030 | MS.gene63520:CDS | 45.0% | |
| TAAAGAGATCAGGCACCCAA+AGG | + | chr3.3:4752240-4752259 | None:intergenic | 45.0% | |
| TAATTGTGCCCAGATTCTGC+TGG | + | chr3.3:4752495-4752514 | None:intergenic | 45.0% | |
| TCATCTTCCTCCTTCACCTT+AGG | + | chr3.3:4753585-4753604 | None:intergenic | 45.0% | |
| TCCCCGAATGTAACTACTAC+GGG | + | chr3.3:4752017-4752036 | None:intergenic | 45.0% | |
| TCCCTCCAATTTGTGGGATT+GGG | - | chr3.3:4753023-4753042 | MS.gene63520:CDS | 45.0% | |
| TGAGGATGAGGATACCAAGA+TGG | - | chr3.3:4753614-4753633 | MS.gene63520:CDS | 45.0% | |
| TGATGCTGAGAATGAGGATG+AGG | - | chr3.3:4753602-4753621 | MS.gene63520:CDS | 45.0% | |
| TGCACGTTATGTTGATCAGG+GGG | - | chr3.3:4752090-4752109 | MS.gene63520:CDS | 45.0% | |
| TGCCCGTAGTAGTTACATTC+GGG | - | chr3.3:4752012-4752031 | MS.gene63520:CDS | 45.0% | |
| TGGTAGATGCAGTTGGCATA+GGG | + | chr3.3:4753104-4753123 | None:intergenic | 45.0% | |
| TGGTCAAAGGGTTTGAAGAC+TGG | - | chr3.3:4753483-4753502 | MS.gene63520:CDS | 45.0% | |
| TGTGACTCCCTCCAATTTGT+GGG | - | chr3.3:4753017-4753036 | MS.gene63520:CDS | 45.0% | |
| TTACACACAGCAGTCTCTGT+TGG | + | chr3.3:4752559-4752578 | None:intergenic | 45.0% | |
| TTATTCAAGCACGGACTCTG+TGG | - | chr3.3:4752392-4752411 | MS.gene63520:CDS | 45.0% | |
| TTGGGTGCCTGATCTCTTTA+TGG | - | chr3.3:4752240-4752259 | MS.gene63520:CDS | 45.0% | |
| ! | ACCCATTGGTATTGGAGTTC+AGG | - | chr3.3:4752798-4752817 | MS.gene63520:CDS | 45.0% |
| ! | ACTCCTACACTTTTCAACGC+CGG | - | chr3.3:4751848-4751867 | MS.gene63520:CDS | 45.0% |
| ! | CCCATTGGTATTGGAGTTCA+GGG | - | chr3.3:4752799-4752818 | MS.gene63520:CDS | 45.0% |
| ! | TACAATCGCAGAGTGCTAAG+TGG | - | chr3.3:4753174-4753193 | MS.gene63520:CDS | 45.0% |
| !! | ACCTGGTTTGGCAGATTGTT+GGG | - | chr3.3:4752312-4752331 | MS.gene63520:CDS | 45.0% |
| !! | AGGTGCTTTTGCTGTGTACT+TGG | - | chr3.3:4752126-4752145 | MS.gene63520:CDS | 45.0% |
| !! | TGTTGATTCAGTTGGCTGGT+AGG | - | chr3.3:4751495-4751514 | MS.gene63520:CDS | 45.0% |
| ACCCCAATCCCACAAATTGG+AGG | + | chr3.3:4753028-4753047 | None:intergenic | 50.0% | |
| ACTAGGAGAGGTTACTGCTG+TGG | - | chr3.3:4752696-4752715 | MS.gene63520:CDS | 50.0% | |
| AGAGATGAGTGTACGTCCTG+TGG | - | chr3.3:4753663-4753682 | MS.gene63520:CDS | 50.0% | |
| AGCGGTAGTCCTGTAAGCAA+GGG | - | chr3.3:4752970-4752989 | MS.gene63520:CDS | 50.0% | |
| CAACTACTCAACTGAGGCCT+AGG | + | chr3.3:4751878-4751897 | None:intergenic | 50.0% | |
| CATCACTTGCAGCTCGTGTT+CGG | + | chr3.3:4753521-4753540 | None:intergenic | 50.0% | |
| CATGAAGAATGCGGCTCGAT+TGG | - | chr3.3:4751616-4751635 | MS.gene63520:CDS | 50.0% | |
| CCAAACCAGGTGCTTCATTG+GGG | + | chr3.3:4752303-4752322 | None:intergenic | 50.0% | |
| CCCCAATCCCACAAATTGGA+GGG | + | chr3.3:4753027-4753046 | None:intergenic | 50.0% | |
| CCCTCCAATTTGTGGGATTG+GGG | - | chr3.3:4753024-4753043 | MS.gene63520:CDS | 50.0% | |
| CTCCCTCCAATTTGTGGGAT+TGG | - | chr3.3:4753022-4753041 | MS.gene63520:CDS | 50.0% | |
| CTGGTAGATGCAGTTGGCAT+AGG | + | chr3.3:4753105-4753124 | None:intergenic | 50.0% | |
| GCACGTTATGTTGATCAGGG+GGG | - | chr3.3:4752091-4752110 | MS.gene63520:CDS | 50.0% | |
| GCCAAACCAGGTGCTTCATT+GGG | + | chr3.3:4752304-4752323 | None:intergenic | 50.0% | |
| GCCCGTAGTAGTTACATTCG+GGG | - | chr3.3:4752013-4752032 | MS.gene63520:CDS | 50.0% | |
| GCGGTAGTGCAATTGATGCA+AGG | + | chr3.3:4752582-4752601 | None:intergenic | 50.0% | |
| GGATACCAAGATGGCACAGA+TGG | - | chr3.3:4753623-4753642 | MS.gene63520:CDS | 50.0% | |
| GGTAGATGCAGTTGGCATAG+GGG | + | chr3.3:4753103-4753122 | None:intergenic | 50.0% | |
| GGTGACGCCTTTATAAACGC+CGG | + | chr3.3:4751166-4751185 | None:intergenic | 50.0% | |
| GTGTGACTCCCTCCAATTTG+TGG | - | chr3.3:4753016-4753035 | MS.gene63520:CDS | 50.0% | |
| TAGCGGTAGTCCTGTAAGCA+AGG | - | chr3.3:4752969-4752988 | MS.gene63520:CDS | 50.0% | |
| TGCACCCCAATCCCACAAAT+TGG | + | chr3.3:4753031-4753050 | None:intergenic | 50.0% | |
| TGCATAATCGGGGTGGTTAG+CGG | + | chr3.3:4751235-4751254 | None:intergenic | 50.0% | |
| TGCCAAACCAGGTGCTTCAT+TGG | + | chr3.3:4752305-4752324 | None:intergenic | 50.0% | |
| TGCTTCATTGGGGCAGAACA+GGG | + | chr3.3:4752293-4752312 | None:intergenic | 50.0% | |
| TTACGGATGCATAATCGGGG+TGG | + | chr3.3:4751242-4751261 | None:intergenic | 50.0% | |
| TTAGACTGATGAGACTCCGC+AGG | + | chr3.3:4752628-4752647 | None:intergenic | 50.0% | |
| TTGCTGTGTACTTGGAGCCA+TGG | - | chr3.3:4752134-4752153 | MS.gene63520:CDS | 50.0% | |
| ! | GTTCCGGCGTTGAAAAGTGT+AGG | + | chr3.3:4751854-4751873 | None:intergenic | 50.0% |
| ! | GTTTCGACAAGATAACGGCG+AGG | - | chr3.3:4751070-4751089 | MS.gene63520:CDS | 50.0% |
| ! | GTTTGCGCCGGCGTTTATAA+AGG | - | chr3.3:4751156-4751175 | MS.gene63520:CDS | 50.0% |
| ! | TTTTCAACGCCGGAACACCT+AGG | - | chr3.3:4751858-4751877 | MS.gene63520:CDS | 50.0% |
| !! | CACCTGGTTTGGCAGATTGT+TGG | - | chr3.3:4752311-4752330 | MS.gene63520:CDS | 50.0% |
| !! | CCTGGTTTGGCAGATTGTTG+GGG | - | chr3.3:4752313-4752332 | MS.gene63520:CDS | 50.0% |
| !! | TCTAAGCTTGTTGGGAGCAG+AGG | - | chr3.3:4752643-4752662 | MS.gene63520:CDS | 50.0% |
| AACTTGCGGCACAGACCCAT+TGG | - | chr3.3:4752784-4752803 | MS.gene63520:CDS | 55.0% | |
| ATGGAAAGAGCTCGGAGCGA+TGG | - | chr3.3:4752259-4752278 | MS.gene63520:CDS | 55.0% | |
| CAACTGAGGCCTAGGTGTTC+CGG | + | chr3.3:4751870-4751889 | None:intergenic | 55.0% | |
| CCCCAACAATCTGCCAAACC+AGG | + | chr3.3:4752316-4752335 | None:intergenic | 55.0% | |
| CGGCACAGACCCATTGGTAT+TGG | - | chr3.3:4752790-4752809 | MS.gene63520:CDS | 55.0% | |
| CGTTATGTTGATCAGGGGGG+AGG | - | chr3.3:4752094-4752113 | MS.gene63520:CDS | 55.0% | |
| GAAGAGAGACGGTCGTCAAG+AGG | - | chr3.3:4751041-4751060 | MS.gene63520:CDS | 55.0% | |
| GCACACCATCTGTGCCATCT+TGG | + | chr3.3:4753631-4753650 | None:intergenic | 55.0% | |
| GTCGCTCAGAAAGTTTGCGC+CGG | - | chr3.3:4751144-4751163 | MS.gene63520:CDS | 55.0% | |
| GTGCTTCATTGGGGCAGAAC+AGG | + | chr3.3:4752294-4752313 | None:intergenic | 55.0% | |
| TGGAAAGAGCTCGGAGCGAT+GGG | - | chr3.3:4752260-4752279 | MS.gene63520:CDS | 55.0% | |
| TGTGGGATTGGGGTGCACTT+CGG | - | chr3.3:4753034-4753053 | MS.gene63520:CDS | 55.0% | |
| ! | CCCCAATGAAGCACCTGGTT+TGG | - | chr3.3:4752300-4752319 | MS.gene63520:CDS | 55.0% |
| ! | GGAGCAGAGGCTCTAGTAGT+CGG | - | chr3.3:4752656-4752675 | MS.gene63520:CDS | 55.0% |
| ! | TTCTGCCCCAATGAAGCACC+TGG | - | chr3.3:4752295-4752314 | MS.gene63520:CDS | 55.0% |
| CACTTGCAGCTCGTGTTCGG+AGG | + | chr3.3:4753518-4753537 | None:intergenic | 60.0% | |
| GAGAGACGGTCGTCAAGAGG+CGG | - | chr3.3:4751044-4751063 | MS.gene63520:CDS | 60.0% | |
| GGAAAGAGCTCGGAGCGATG+GGG | - | chr3.3:4752261-4752280 | MS.gene63520:CDS | 60.0% | |
| GGAGTCACACCCCACATGTC+AGG | + | chr3.3:4753006-4753025 | None:intergenic | 60.0% | |
| GTGGGATTGGGGTGCACTTC+GGG | - | chr3.3:4753035-4753054 | MS.gene63520:CDS | 60.0% | |
| TTAGCCGCTGAAACTGCCGC+CGG | - | chr3.3:4751204-4751223 | MS.gene63520:CDS | 60.0% | |
| TTGATCAGGGGGGAGGCAAG+AGG | - | chr3.3:4752101-4752120 | MS.gene63520:CDS | 60.0% | |
| CAGGGGGGAGGCAAGAGGAA+AGG | - | chr3.3:4752106-4752125 | MS.gene63520:CDS | 65.0% | |
| CATGCCGGCGGCAGTTTCAG+CGG | + | chr3.3:4751211-4751230 | None:intergenic | 65.0% | |
| GAGCTCGGAGCGATGGGGAA+TGG | - | chr3.3:4752266-4752285 | MS.gene63520:CDS | 65.0% | |
| GGGGTGGTTAGCGGTCATGC+CGG | + | chr3.3:4751226-4751245 | None:intergenic | 65.0% | |
| GTGGTTAGCGGTCATGCCGG+CGG | + | chr3.3:4751223-4751242 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 4751030 | 4753692 | 4751030 | ID=MS.gene63520 |
| chr3.3 | mRNA | 4751030 | 4753692 | 4751030 | ID=MS.gene63520.t1;Parent=MS.gene63520 |
| chr3.3 | exon | 4753465 | 4753692 | 4753465 | ID=MS.gene63520.t1.exon1;Parent=MS.gene63520.t1 |
| chr3.3 | CDS | 4753465 | 4753692 | 4753465 | ID=cds.MS.gene63520.t1;Parent=MS.gene63520.t1 |
| chr3.3 | exon | 4751030 | 4753216 | 4751030 | ID=MS.gene63520.t1.exon2;Parent=MS.gene63520.t1 |
| chr3.3 | CDS | 4751030 | 4753216 | 4751030 | ID=cds.MS.gene63520.t1;Parent=MS.gene63520.t1 |
| Gene Sequence |
| Protein sequence |
