Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63562.t1 | XP_013459409.1 | 95.4 | 1154 | 53 | 0 | 1 | 1154 | 1 | 1154 | 0.00E+00 | 2154.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63562.t1 | Q9SX33 | 73.0 | 1158 | 296 | 6 | 2 | 1148 | 9 | 1160 | 0.0e+00 | 1682.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63562.t1 | A0A072V5J0 | 95.4 | 1154 | 53 | 0 | 1 | 1154 | 1 | 1154 | 0.0e+00 | 2154.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052679 | MS.gene63562 | 0.809339 | 1.99E-50 | -1.69E-46 |
MS.gene052680 | MS.gene63562 | 0.806332 | 8.66E-50 | -1.69E-46 |
MS.gene052681 | MS.gene63562 | 0.825068 | 5.73E-54 | -1.69E-46 |
MS.gene052682 | MS.gene63562 | 0.818054 | 2.39E-52 | -1.69E-46 |
MS.gene052686 | MS.gene63562 | 0.802274 | 6.07E-49 | -1.69E-46 |
MS.gene054576 | MS.gene63562 | 0.8077 | 4.45E-50 | -1.69E-46 |
MS.gene058289 | MS.gene63562 | 0.835992 | 1.21E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63562.t1 | MTR_3g037330 | 97.747 | 1154 | 26 | 0 | 1 | 1154 | 1 | 1154 | 0.0 | 2343 |
MS.gene63562.t1 | MTR_3g037330 | 97.832 | 1061 | 23 | 0 | 94 | 1154 | 24 | 1084 | 0.0 | 2155 |
MS.gene63562.t1 | MTR_8g069920 | 77.218 | 1172 | 246 | 5 | 2 | 1154 | 5 | 1174 | 0.0 | 1883 |
MS.gene63562.t1 | MTR_0021s0360 | 77.056 | 1155 | 256 | 7 | 5 | 1154 | 4 | 1154 | 0.0 | 1827 |
MS.gene63562.t1 | MTR_4g112430 | 67.532 | 1155 | 364 | 5 | 2 | 1148 | 5 | 1156 | 0.0 | 1639 |
MS.gene63562.t1 | MTR_6g006910 | 62.425 | 1163 | 417 | 7 | 4 | 1149 | 7 | 1166 | 0.0 | 1519 |
MS.gene63562.t1 | MTR_2g099690 | 55.161 | 1182 | 482 | 7 | 5 | 1152 | 10 | 1177 | 0.0 | 1345 |
MS.gene63562.t1 | MTR_2g099690 | 56.641 | 911 | 345 | 8 | 5 | 880 | 10 | 905 | 0.0 | 1028 |
MS.gene63562.t1 | MTR_5g037210 | 45.357 | 1120 | 578 | 14 | 35 | 1141 | 23 | 1121 | 0.0 | 975 |
MS.gene63562.t1 | MTR_2g099690 | 54.680 | 876 | 347 | 8 | 5 | 845 | 10 | 870 | 0.0 | 952 |
MS.gene63562.t1 | MTR_8g018290 | 53.874 | 839 | 342 | 5 | 349 | 1152 | 3 | 831 | 0.0 | 936 |
MS.gene63562.t1 | MTR_8g018290 | 53.810 | 840 | 348 | 6 | 349 | 1152 | 3 | 838 | 0.0 | 934 |
MS.gene63562.t1 | MTR_7g073480 | 37.284 | 1156 | 639 | 24 | 28 | 1134 | 135 | 1253 | 0.0 | 697 |
MS.gene63562.t1 | MTR_3g007240 | 36.610 | 1109 | 644 | 16 | 35 | 1134 | 120 | 1178 | 0.0 | 663 |
MS.gene63562.t1 | MTR_8g044210 | 36.904 | 1111 | 639 | 22 | 41 | 1134 | 78 | 1143 | 0.0 | 650 |
MS.gene63562.t1 | MTR_2g090610 | 31.839 | 1093 | 638 | 28 | 45 | 1124 | 8 | 1006 | 3.78e-166 | 521 |
MS.gene63562.t1 | MTR_8g062150 | 46.486 | 555 | 278 | 8 | 36 | 584 | 44 | 585 | 1.62e-157 | 482 |
MS.gene63562.t1 | MTR_2g090610 | 32.633 | 999 | 570 | 25 | 45 | 1028 | 8 | 918 | 1.45e-155 | 489 |
MS.gene63562.t1 | MTR_3g007240 | 36.667 | 840 | 484 | 14 | 31 | 861 | 116 | 916 | 1.95e-153 | 483 |
MS.gene63562.t1 | MTR_8g027160 | 25.084 | 594 | 324 | 20 | 403 | 972 | 347 | 843 | 3.55e-22 | 103 |
MS.gene63562.t1 | MTR_8g027160 | 25.084 | 594 | 324 | 20 | 403 | 972 | 347 | 843 | 3.78e-22 | 103 |
MS.gene63562.t1 | MTR_2g056040 | 65.625 | 64 | 22 | 0 | 676 | 739 | 1 | 64 | 6.46e-22 | 91.7 |
MS.gene63562.t1 | MTR_2g105830 | 25.379 | 528 | 238 | 20 | 405 | 912 | 482 | 873 | 1.97e-18 | 91.7 |
MS.gene63562.t1 | MTR_4g008650 | 28.182 | 220 | 117 | 7 | 554 | 760 | 521 | 712 | 1.48e-13 | 75.9 |
MS.gene63562.t1 | MTR_4g008650 | 28.182 | 220 | 117 | 7 | 554 | 760 | 521 | 712 | 2.19e-13 | 75.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63562.t1 | AT1G68710 | 73.224 | 1154 | 292 | 6 | 6 | 1148 | 13 | 1160 | 0.0 | 1778 |
MS.gene63562.t1 | AT1G68710 | 73.224 | 1154 | 292 | 6 | 6 | 1148 | 13 | 1160 | 0.0 | 1778 |
MS.gene63562.t1 | AT1G68710 | 71.610 | 1180 | 292 | 7 | 6 | 1148 | 13 | 1186 | 0.0 | 1764 |
MS.gene63562.t1 | AT1G26130 | 71.032 | 1153 | 324 | 5 | 2 | 1148 | 9 | 1157 | 0.0 | 1723 |
MS.gene63562.t1 | AT1G26130 | 71.032 | 1153 | 324 | 5 | 2 | 1148 | 9 | 1157 | 0.0 | 1723 |
MS.gene63562.t1 | AT1G26130 | 71.032 | 1153 | 324 | 5 | 2 | 1148 | 9 | 1157 | 0.0 | 1723 |
MS.gene63562.t1 | AT1G26130 | 71.032 | 1153 | 323 | 6 | 2 | 1148 | 9 | 1156 | 0.0 | 1717 |
MS.gene63562.t1 | AT3G25610 | 70.732 | 1148 | 326 | 8 | 6 | 1147 | 11 | 1154 | 0.0 | 1717 |
MS.gene63562.t1 | AT1G13210 | 69.757 | 1154 | 338 | 7 | 2 | 1147 | 5 | 1155 | 0.0 | 1679 |
MS.gene63562.t1 | AT3G27870 | 63.510 | 1151 | 396 | 8 | 2 | 1138 | 5 | 1145 | 0.0 | 1559 |
MS.gene63562.t1 | AT3G27870 | 64.960 | 996 | 325 | 8 | 2 | 983 | 5 | 990 | 0.0 | 1364 |
MS.gene63562.t1 | AT3G13900 | 54.291 | 1177 | 482 | 8 | 9 | 1145 | 13 | 1173 | 0.0 | 1326 |
MS.gene63562.t1 | AT3G27870 | 64.033 | 962 | 324 | 6 | 191 | 1138 | 1 | 954 | 0.0 | 1325 |
MS.gene63562.t1 | AT1G17500 | 54.880 | 1168 | 492 | 7 | 5 | 1152 | 9 | 1161 | 0.0 | 1323 |
MS.gene63562.t1 | AT1G17500 | 54.880 | 1168 | 492 | 7 | 5 | 1152 | 9 | 1161 | 0.0 | 1323 |
MS.gene63562.t1 | AT1G72700 | 53.859 | 1179 | 499 | 8 | 5 | 1152 | 9 | 1173 | 0.0 | 1313 |
MS.gene63562.t1 | AT1G72700 | 53.859 | 1179 | 499 | 8 | 5 | 1152 | 9 | 1173 | 0.0 | 1313 |
MS.gene63562.t1 | AT1G72700 | 53.859 | 1179 | 499 | 8 | 5 | 1152 | 9 | 1173 | 0.0 | 1313 |
MS.gene63562.t1 | AT1G54280 | 53.571 | 1176 | 494 | 6 | 9 | 1145 | 13 | 1175 | 0.0 | 1308 |
MS.gene63562.t1 | AT1G54280 | 53.571 | 1176 | 494 | 6 | 9 | 1145 | 13 | 1175 | 0.0 | 1308 |
MS.gene63562.t1 | AT1G54280 | 53.571 | 1176 | 494 | 6 | 9 | 1145 | 13 | 1175 | 0.0 | 1308 |
MS.gene63562.t1 | AT3G13900 | 56.184 | 954 | 360 | 9 | 9 | 920 | 13 | 950 | 0.0 | 1082 |
MS.gene63562.t1 | AT3G13900 | 55.568 | 916 | 351 | 8 | 9 | 884 | 13 | 912 | 0.0 | 1022 |
MS.gene63562.t1 | AT1G59820 | 45.013 | 1113 | 585 | 14 | 36 | 1141 | 36 | 1128 | 0.0 | 959 |
MS.gene63562.t1 | AT5G04930 | 36.592 | 1115 | 615 | 25 | 35 | 1124 | 67 | 1114 | 0.0 | 648 |
MS.gene63562.t1 | AT5G44240 | 32.472 | 1084 | 623 | 30 | 55 | 1124 | 18 | 1006 | 1.27e-165 | 520 |
MS.gene63562.t1 | AT5G44240 | 32.472 | 1084 | 623 | 30 | 55 | 1124 | 50 | 1038 | 6.60e-165 | 519 |
MS.gene63562.t1 | AT4G00900 | 24.831 | 592 | 325 | 18 | 403 | 972 | 346 | 839 | 9.61e-22 | 102 |
MS.gene63562.t1 | AT4G00900 | 24.831 | 592 | 325 | 18 | 403 | 972 | 346 | 839 | 9.61e-22 | 102 |
MS.gene63562.t1 | AT1G07670 | 25.386 | 583 | 310 | 23 | 403 | 966 | 361 | 837 | 1.29e-18 | 92.4 |
MS.gene63562.t1 | AT1G07670 | 25.386 | 583 | 310 | 23 | 403 | 966 | 361 | 837 | 1.29e-18 | 92.4 |
MS.gene63562.t1 | AT3G18700 | 54.667 | 75 | 29 | 3 | 936 | 1007 | 5 | 77 | 2.41e-13 | 70.1 |
MS.gene63562.t1 | AT1G07810 | 26.629 | 353 | 192 | 14 | 403 | 736 | 361 | 665 | 6.24e-11 | 67.4 |
Find 225 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCTAATGCTTGAATTTC+AGG | 0.092546 | 3.2:-25753383 | None:intergenic |
TTCAAACTCCCTTCCATTAA+TGG | 0.130822 | 3.2:-25752790 | None:intergenic |
AAGATTATCTACTTCTTATT+TGG | 0.153322 | 3.2:+25751567 | MS.gene63562:CDS |
ATGGAGTTGGATCCGGTTTC+TGG | 0.155446 | 3.2:+25752350 | MS.gene63562:CDS |
TTGCTCCATCAGATTCCTTT+TGG | 0.204665 | 3.2:+25756054 | MS.gene63562:CDS |
CGCTTCCCGCCATTGCCCTT+GGG | 0.205675 | 3.2:+25754938 | MS.gene63562:CDS |
TTTGGGGTTCTATTGCTATT+TGG | 0.221327 | 3.2:+25755955 | MS.gene63562:CDS |
TATTTATTCGTGTTTGCTTA+TGG | 0.221522 | 3.2:+25755978 | MS.gene63562:CDS |
GGTACAACATGTTGCCATTT+GGG | 0.235702 | 3.2:+25755938 | MS.gene63562:CDS |
CAGAAAGGATTGTGTCAATT+TGG | 0.237613 | 3.2:-25751920 | None:intergenic |
TTTATTGGATCTATTCTCTT+TGG | 0.253050 | 3.2:+25751609 | MS.gene63562:CDS |
TTTGAAAGGCTTGCCATTAA+TGG | 0.262915 | 3.2:+25752777 | MS.gene63562:CDS |
CACAAGCTAGAATTAAGATA+TGG | 0.263078 | 3.2:+25753165 | MS.gene63562:CDS |
TTGGAAGACAAGGGTATTCT+AGG | 0.272681 | 3.2:+25749906 | MS.gene63562:CDS |
TTCATCAAATGTTCGGTTGC+TGG | 0.279773 | 3.2:+25751978 | MS.gene63562:CDS |
TACATGGACATTGGTGTTAC+AGG | 0.280817 | 3.2:+25754418 | MS.gene63562:CDS |
AGTCATTGTTTGAGCAGTTT+AGG | 0.281595 | 3.2:+25750035 | MS.gene63562:CDS |
GAATTCGGCGCCACCTAAAT+AGG | 0.284721 | 3.2:-25755725 | None:intergenic |
AACTGGAATCAATTGATATC+AGG | 0.289431 | 3.2:+25752057 | MS.gene63562:CDS |
AATTGCACAATTCCGGTATC+TGG | 0.297086 | 3.2:+25754380 | MS.gene63562:CDS |
TTCGGAGCAGTCATCTTTAC+TGG | 0.309047 | 3.2:+25751471 | MS.gene63562:CDS |
CCATGTATACTTGTGTCGTT+TGG | 0.311621 | 3.2:+25755871 | MS.gene63562:CDS |
AATTTCTATTTCCTTGTTGC+TGG | 0.314481 | 3.2:+25750067 | MS.gene63562:CDS |
GATTAATGAATATGCTTTGA+AGG | 0.316781 | 3.2:-25751821 | None:intergenic |
AAAGAATAATGAACGGAAAC+TGG | 0.319383 | 3.2:+25752129 | MS.gene63562:CDS |
GCAGAAGAAGAAAATTATTA+TGG | 0.331068 | 3.2:-25755778 | None:intergenic |
GGTACAATGGATGAGGTATA+AGG | 0.331412 | 3.2:+25756169 | MS.gene63562:CDS |
TCGCTTCCCGCCATTGCCCT+TGG | 0.333114 | 3.2:+25754937 | MS.gene63562:CDS |
GTAGAAGACAAGCTCCAAAA+TGG | 0.334486 | 3.2:+25753023 | MS.gene63562:CDS |
CTTGTATTTCTCAATAGAAT+TGG | 0.336216 | 3.2:+25751791 | MS.gene63562:CDS |
GTGTACAAAATGTCCTATTT+AGG | 0.342856 | 3.2:+25755712 | MS.gene63562:CDS |
CCTGTTTCCTCGTCCACTTC+CGG | 0.343161 | 3.2:-25752221 | None:intergenic |
CGTAATACAGACTTCATATT+CGG | 0.344767 | 3.2:+25751453 | MS.gene63562:CDS |
AAAGAGTACAAATTTGCATT+TGG | 0.346977 | 3.2:-25751354 | None:intergenic |
TTTGAAGCTAAAACAAGGTT+TGG | 0.350750 | 3.2:+25751263 | MS.gene63562:CDS |
GAAGAAGTTGTATAGCATTA+AGG | 0.356254 | 3.2:-25751757 | None:intergenic |
ACAATCCTTTCTGATAAAAC+TGG | 0.357068 | 3.2:+25751930 | MS.gene63562:CDS |
CGTTCTCGTCAAAGGCTTGA+AGG | 0.358215 | 3.2:-25755815 | None:intergenic |
TCGGTTGCTGGGGTAGCTTA+TGG | 0.358460 | 3.2:+25751990 | MS.gene63562:CDS |
CAACAAGATAGATTTGAATC+AGG | 0.359396 | 3.2:+25749947 | MS.gene63562:CDS |
GAATGCTCTCTCTTAAACTT+TGG | 0.359897 | 3.2:-25749878 | None:intergenic |
CTTCCTTTAGCTGTTATAGT+TGG | 0.363690 | 3.2:+25750139 | MS.gene63562:CDS |
GCAGACTGCATCTTCGTAAC+TGG | 0.363861 | 3.2:-25751205 | None:intergenic |
TGACAGCAGCTTTGAAATCA+TGG | 0.368958 | 3.2:-25751320 | None:intergenic |
TGGTACAACATGTTGCCATT+TGG | 0.369553 | 3.2:+25755937 | MS.gene63562:CDS |
ATATTGCAATTGCACAATTC+CGG | 0.375437 | 3.2:+25754373 | MS.gene63562:CDS |
ATAGCACTAACAGCAGTATA+AGG | 0.380016 | 3.2:-25750115 | None:intergenic |
TTCTAAGTTGGATGCTCAAC+GGG | 0.380465 | 3.2:+25755745 | MS.gene63562:CDS |
TTCTACAAGAATATTACATT+TGG | 0.389391 | 3.2:+25754820 | MS.gene63562:CDS |
TTCTTCTGCACTAAAGCAAT+AGG | 0.389424 | 3.2:+25755792 | MS.gene63562:CDS |
ATAAAATTAAAACCTTTGAT+TGG | 0.392819 | 3.2:-25752101 | None:intergenic |
TGAGCATCCAACTTAGAATT+CGG | 0.402885 | 3.2:-25755740 | None:intergenic |
CATACCAGAGCCTTCTGCTT+TGG | 0.404281 | 3.2:-25753775 | None:intergenic |
TTCATTCAAGTTTGAAGTAC+GGG | 0.405582 | 3.2:-25751889 | None:intergenic |
ATCACAAATGCTGCTTCATC+AGG | 0.408000 | 3.2:-25752269 | None:intergenic |
AACTTTGACTTGCAACTCAA+TGG | 0.412940 | 3.2:+25751953 | MS.gene63562:CDS |
TCAACCTCATTGCCAGAAAC+CGG | 0.415131 | 3.2:-25752362 | None:intergenic |
CCGGAAGTGGACGAGGAAAC+AGG | 0.415407 | 3.2:+25752221 | MS.gene63562:CDS |
TATGACAAACAGACAATAAA+CGG | 0.417642 | 3.2:-25752190 | None:intergenic |
AAAGAGAATAGATCCAATAA+AGG | 0.418393 | 3.2:-25751607 | None:intergenic |
ACACCTTCTTGGTACAAGAT+AGG | 0.418606 | 3.2:-25755693 | None:intergenic |
TCATCAAATGTTCGGTTGCT+GGG | 0.418614 | 3.2:+25751979 | MS.gene63562:CDS |
AATATTATACCCAATGTTGA+TGG | 0.420341 | 3.2:-25753216 | None:intergenic |
AAGAAAATGGTGGAATCATC+TGG | 0.425560 | 3.2:-25751687 | None:intergenic |
ATCAATGATGGAGTTGGATC+CGG | 0.426178 | 3.2:+25752343 | MS.gene63562:CDS |
TTTCACTCTATTCTTATATG+AGG | 0.431318 | 3.2:+25754843 | MS.gene63562:CDS |
ACAAGCTAGAATTAAGATAT+GGG | 0.433537 | 3.2:+25753166 | MS.gene63562:CDS |
AAACTGCTTTCTGCATCTAA+AGG | 0.437114 | 3.2:+25753622 | MS.gene63562:CDS |
CTCATAAAAGGTTACTAGAT+TGG | 0.437606 | 3.2:+25754111 | MS.gene63562:intron |
TAGAAGACAAGCTCCAAAAT+GGG | 0.438213 | 3.2:+25753024 | MS.gene63562:CDS |
AGAAGAGTTATATGTCATAA+AGG | 0.439780 | 3.2:+25751078 | MS.gene63562:CDS |
AAGAGAGAGCATTCACAGAT+TGG | 0.439786 | 3.2:+25749887 | MS.gene63562:CDS |
ATTATGCTGATAATTCTGTT+AGG | 0.442793 | 3.2:+25749978 | MS.gene63562:CDS |
CATTGGTAGTAGGTCGGAAC+TGG | 0.447064 | 3.2:+25752040 | MS.gene63562:CDS |
CATGTATACTTGTGTCGTTT+GGG | 0.447842 | 3.2:+25755872 | MS.gene63562:CDS |
AACTGCTTTCTGCATCTAAA+GGG | 0.455917 | 3.2:+25753623 | MS.gene63562:CDS |
TAATATGTACTATGAAGAAC+TGG | 0.459205 | 3.2:+25751851 | MS.gene63562:CDS |
AATGGAGTTCATCAAATGTT+CGG | 0.463379 | 3.2:+25751971 | MS.gene63562:CDS |
CTCTCCTCCCTAGGCCGTCA+TGG | 0.464414 | 3.2:+25754344 | MS.gene63562:intron |
GCAGTTGTTGAAAAGCTTGA+AGG | 0.465063 | 3.2:-25756008 | None:intergenic |
TGTTATAGTTGGTGCAACTA+TGG | 0.466414 | 3.2:+25750150 | MS.gene63562:CDS |
AGAAGCTGCTGAGGAGAAAG+TGG | 0.468812 | 3.2:-25751411 | None:intergenic |
TCAGAACAGTTTATCAATGA+TGG | 0.468858 | 3.2:+25752331 | MS.gene63562:CDS |
GAGAGGAATCTAATCCTTCT+CGG | 0.469754 | 3.2:+25752990 | MS.gene63562:CDS |
GTCATTGTATGCAGGCTGTC+CGG | 0.469954 | 3.2:-25754881 | None:intergenic |
AGTAACTTCTTCATTAAATG+AGG | 0.471404 | 3.2:+25751287 | MS.gene63562:CDS |
GAAAGCAGTAATAGGTCGGC+AGG | 0.473145 | 3.2:-25751180 | None:intergenic |
AACTGGACGAAAGCAGTAAT+AGG | 0.476044 | 3.2:-25751188 | None:intergenic |
TCATACTGCCATGCCGGAAG+TGG | 0.477207 | 3.2:+25752208 | MS.gene63562:CDS |
CTTCATTCAAGTTTGAAGTA+CGG | 0.477834 | 3.2:-25751890 | None:intergenic |
CGTGCAGTGTCATGTTTGAA+AGG | 0.477969 | 3.2:+25752763 | MS.gene63562:intron |
CTACGTTGAAACGATGAACT+TGG | 0.481235 | 3.2:+25751227 | MS.gene63562:CDS |
TGCTCTGTAAAGGCGCTGAC+AGG | 0.482856 | 3.2:+25752654 | MS.gene63562:CDS |
GTACAATGGATGAGGTATAA+GGG | 0.483970 | 3.2:+25756170 | MS.gene63562:CDS |
GAAGTAATCTTTCCAGATAC+CGG | 0.489297 | 3.2:-25754392 | None:intergenic |
TGGAGACTGCCATCAACATT+GGG | 0.499022 | 3.2:+25753207 | MS.gene63562:CDS |
ATGGAGACTGCCATCAACAT+TGG | 0.501775 | 3.2:+25753206 | MS.gene63562:CDS |
TGTTTCCTATGCATCATGAA+AGG | 0.506304 | 3.2:+25756147 | MS.gene63562:CDS |
TGCCATGCCGGAAGTGGACG+AGG | 0.510510 | 3.2:+25752214 | MS.gene63562:CDS |
ATCGCCAAAGCAGAAGGCTC+TGG | 0.513485 | 3.2:+25753771 | MS.gene63562:CDS |
GGTGGCGCCGAATTCTAAGT+TGG | 0.514230 | 3.2:+25755733 | MS.gene63562:CDS |
TTCCTCGTCCACTTCCGGCA+TGG | 0.515006 | 3.2:-25752216 | None:intergenic |
GAGCTTGTCTTCTACAGCAG+TGG | 0.515492 | 3.2:-25753015 | None:intergenic |
CTATGAAGAACTGGACAAAC+CGG | 0.515910 | 3.2:+25751860 | MS.gene63562:CDS |
GTTTCCTATGCATCATGAAA+GGG | 0.517453 | 3.2:+25756148 | MS.gene63562:CDS |
CATTGTTTGAGCAGTTTAGG+AGG | 0.518268 | 3.2:+25750038 | MS.gene63562:CDS |
GTTACTAGATTGGTCAAAGA+AGG | 0.518896 | 3.2:+25754121 | MS.gene63562:CDS |
GCTTCCCGCCATTGCCCTTG+GGG | 0.519580 | 3.2:+25754939 | MS.gene63562:CDS |
TATTGAGAAATACAAGGAGA+TGG | 0.520310 | 3.2:-25751784 | None:intergenic |
GCACCAACTATAACAGCTAA+AGG | 0.520410 | 3.2:-25750142 | None:intergenic |
GCTGGGGTAGCTTATGGCCG+TGG | 0.520696 | 3.2:+25751996 | MS.gene63562:CDS |
ATTTGTTCTGCAGGATATTG+AGG | 0.523362 | 3.2:+25751047 | MS.gene63562:intron |
CAGTTTATCAATGATGGAGT+TGG | 0.523883 | 3.2:+25752337 | MS.gene63562:CDS |
GAGCAAAATCGAGATGAAGA+TGG | 0.524645 | 3.2:+25751542 | MS.gene63562:CDS |
CAAGAAGCTGATGTAGGTGT+TGG | 0.531998 | 3.2:+25754199 | MS.gene63562:CDS |
TGCAATATCACTAGCCATGA+CGG | 0.534715 | 3.2:-25754358 | None:intergenic |
TCTCGGAGAAGAAGCTGCTG+AGG | 0.535606 | 3.2:-25751420 | None:intergenic |
GTCACTTGTTTATGCTCTAG+AGG | 0.536426 | 3.2:+25753684 | MS.gene63562:CDS |
GAAGGATGGAGGAGACAAGA+TGG | 0.538054 | 3.2:+25753403 | MS.gene63562:CDS |
CCAAACGACACAAGTATACA+TGG | 0.538726 | 3.2:-25755871 | None:intergenic |
CAGTGGTGTTGAAGGAATGC+AGG | 0.539214 | 3.2:+25754225 | MS.gene63562:CDS |
AGTACCTAGCAGATACATCT+TGG | 0.539728 | 3.2:-25754969 | None:intergenic |
TTTCCTATCTTGTACCAAGA+AGG | 0.539909 | 3.2:+25755690 | MS.gene63562:CDS |
ACAACGGAATTATGAAAAGA+TGG | 0.539970 | 3.2:+25751655 | MS.gene63562:CDS |
GAGGTGTATGCATCATTCTC+CGG | 0.542206 | 3.2:+25754862 | MS.gene63562:CDS |
TTTGAAGTACGGGCAAGAGC+CGG | 0.543120 | 3.2:-25751879 | None:intergenic |
CTTCAAGCCTTTGACGAGAA+CGG | 0.543588 | 3.2:+25755816 | MS.gene63562:CDS |
GTCAAAGACCCCAAGGGCAA+TGG | 0.544360 | 3.2:-25754947 | None:intergenic |
AATAGCAATAGAACCCCAAA+TGG | 0.546308 | 3.2:-25755952 | None:intergenic |
AAAGGCTTGCCATTAATGGA+AGG | 0.548014 | 3.2:+25752781 | MS.gene63562:CDS |
TGTACCCTTTCATGATGCAT+AGG | 0.548249 | 3.2:-25756152 | None:intergenic |
TTTGAATGATCTTACCATTG+TGG | 0.549643 | 3.2:-25754448 | None:intergenic |
AATCAATGATTCATGATCCA+TGG | 0.550551 | 3.2:-25752946 | None:intergenic |
GTACAACATGTTGCCATTTG+GGG | 0.550990 | 3.2:+25755939 | MS.gene63562:CDS |
GTTATATGTCATAAAGGTGG+TGG | 0.551348 | 3.2:+25751084 | MS.gene63562:CDS |
GTTGGAATCAGTGGTGTTGA+AGG | 0.551752 | 3.2:+25754217 | MS.gene63562:CDS |
ACAACATTAGCTATCGGTGA+TGG | 0.551800 | 3.2:+25754154 | MS.gene63562:CDS |
TACTTCTTGTACATGGACAT+TGG | 0.552282 | 3.2:+25754409 | MS.gene63562:CDS |
TTCTTCATCAAGTTCACGAT+AGG | 0.552409 | 3.2:-25752874 | None:intergenic |
GGATCATGAATCATTGATTG+AGG | 0.552625 | 3.2:+25752950 | MS.gene63562:CDS |
ACAGAGGTTGAGCAAGCCAT+TGG | 0.552734 | 3.2:+25752023 | MS.gene63562:CDS |
AAATAATGTGAGAATCCAAA+AGG | 0.553021 | 3.2:-25756069 | None:intergenic |
TTTCTGGCAATGAGGTTGAA+AGG | 0.557011 | 3.2:+25752366 | MS.gene63562:CDS |
TGGAAGACAAGGGTATTCTA+GGG | 0.557902 | 3.2:+25749907 | MS.gene63562:CDS |
AACTGCTCAAACAATGACTT+AGG | 0.558931 | 3.2:-25750031 | None:intergenic |
ACTGGAATCAATTGATATCA+GGG | 0.559607 | 3.2:+25752058 | MS.gene63562:CDS |
GAAAGATTACTTCTTGTACA+TGG | 0.560318 | 3.2:+25754402 | MS.gene63562:CDS |
TTTAGGATCAAAGAAAATGG+TGG | 0.560736 | 3.2:-25751697 | None:intergenic |
AGAATCCAAAAGGAATCTGA+TGG | 0.562368 | 3.2:-25756059 | None:intergenic |
TCGCTCATCGCCAAAGCAGA+AGG | 0.562440 | 3.2:+25753765 | MS.gene63562:CDS |
TCTTGTCGCTTGCTTCGACA+AGG | 0.562978 | 3.2:+25753329 | MS.gene63562:CDS |
GACAGCCTGCATACAATGAC+TGG | 0.562997 | 3.2:+25754884 | MS.gene63562:CDS |
ATCGTGGAGCACGAAAAGTA+TGG | 0.564066 | 3.2:-25756113 | None:intergenic |
ATTGAGAAATACAAGGAGAT+GGG | 0.564117 | 3.2:-25751783 | None:intergenic |
AAATATAGTGAAGATAAAGA+AGG | 0.572990 | 3.2:+25751146 | MS.gene63562:CDS |
CAGTTCCGACCTACTACCAA+TGG | 0.573787 | 3.2:-25752039 | None:intergenic |
AGATTGGTCAAAGAAGGAAC+TGG | 0.574066 | 3.2:+25754127 | MS.gene63562:CDS |
ATTCTAAGTTGGATGCTCAA+CGG | 0.574175 | 3.2:+25755744 | MS.gene63562:CDS |
CATTCACAGATTGGAAGACA+AGG | 0.574518 | 3.2:+25749896 | MS.gene63562:CDS |
GTGATAGTTAAAGATGAAGA+CGG | 0.574581 | 3.2:+25752620 | MS.gene63562:CDS |
TTGAGCAAGCCATTGGTAGT+AGG | 0.576117 | 3.2:+25752030 | MS.gene63562:CDS |
ATGAAAGGGTACAATGGATG+AGG | 0.576394 | 3.2:+25756162 | MS.gene63562:CDS |
CAATTCTATTGAGAAATACA+AGG | 0.576444 | 3.2:-25751790 | None:intergenic |
AAAGACCCCAAGGGCAATGG+CGG | 0.578585 | 3.2:-25754944 | None:intergenic |
CTACAGCAGTGGCACCGAGA+AGG | 0.578850 | 3.2:-25753004 | None:intergenic |
AAATATCAGAAAAGATTGAG+AGG | 0.579299 | 3.2:+25752973 | MS.gene63562:CDS |
GGTAAAACAACATTAGCTAT+CGG | 0.580765 | 3.2:+25754148 | MS.gene63562:CDS |
TGATAGTTAAAGATGAAGAC+GGG | 0.581808 | 3.2:+25752621 | MS.gene63562:CDS |
AAGACCCCAAGGGCAATGGC+GGG | 0.582101 | 3.2:-25754943 | None:intergenic |
ATTCAAGCATTAGAGAAGGA+TGG | 0.585019 | 3.2:+25753389 | MS.gene63562:CDS |
GCATTTGCTCTGATAATCGA+TGG | 0.585989 | 3.2:+25753658 | MS.gene63562:CDS |
GTGTATCTTCAGATATCTGA+AGG | 0.586350 | 3.2:+25753595 | MS.gene63562:CDS |
TACAAAATGTCCTATTTAGG+TGG | 0.586836 | 3.2:+25755715 | MS.gene63562:CDS |
CGTGCTCCACGATTAAAATG+TGG | 0.587780 | 3.2:+25756123 | MS.gene63562:CDS |
ATGCTTCAAGAAGCTGATGT+AGG | 0.588681 | 3.2:+25754193 | MS.gene63562:CDS |
ACCGCTGGAAAAGACATACT+AGG | 0.589669 | 3.2:+25755843 | MS.gene63562:CDS |
GTGATTGCTGCAAGAGAAGT+GGG | 0.590048 | 3.2:+25752287 | MS.gene63562:CDS |
ACTAAACGTGACTTGAACAA+CGG | 0.595592 | 3.2:+25751639 | MS.gene63562:CDS |
TTGGGTTGTAAACCTACAGA+TGG | 0.595777 | 3.2:+25755890 | MS.gene63562:CDS |
GATCGAAAAGAACCAATCAA+AGG | 0.596365 | 3.2:+25752089 | MS.gene63562:CDS |
GTGAGTGAATATGCTGATGC+AGG | 0.598689 | 3.2:+25752831 | MS.gene63562:CDS |
AGTTGGTGCAACTATGGTGA+AGG | 0.600945 | 3.2:+25750156 | MS.gene63562:CDS |
TGAAATTCAAGCATTAGAGA+AGG | 0.601663 | 3.2:+25753385 | MS.gene63562:CDS |
ATTGTTTGAGCAGTTTAGGA+GGG | 0.602269 | 3.2:+25750039 | MS.gene63562:CDS |
CATCAAATGTTCGGTTGCTG+GGG | 0.604157 | 3.2:+25751980 | MS.gene63562:CDS |
ATCTGCTAGGTACTGCGTCA+AGG | 0.606063 | 3.2:+25754978 | MS.gene63562:CDS |
ATAGATGAAAGAATAATGAA+CGG | 0.608033 | 3.2:+25752122 | MS.gene63562:CDS |
AAGGCTTGCCATTAATGGAA+GGG | 0.610755 | 3.2:+25752782 | MS.gene63562:CDS |
GCACAGCGAGCGCCATCTGT+AGG | 0.610848 | 3.2:-25755902 | None:intergenic |
CGGTGATGGAGCTAATGACG+TGG | 0.613028 | 3.2:+25754168 | MS.gene63562:CDS |
TTGACCAAGATGTATCTGCT+AGG | 0.614128 | 3.2:+25754965 | MS.gene63562:CDS |
TGCATCATGAAAGGGTACAA+TGG | 0.615628 | 3.2:+25756156 | MS.gene63562:CDS |
AGAGTTATATGTCATAAAGG+TGG | 0.616344 | 3.2:+25751081 | MS.gene63562:CDS |
TGTGATTGCTGCAAGAGAAG+TGG | 0.617623 | 3.2:+25752286 | MS.gene63562:CDS |
GAGTGGAAGAATCTCAAGGT+AGG | 0.622591 | 3.2:+25751123 | MS.gene63562:CDS |
ACAAATTTGAAGCTAAAACA+AGG | 0.623681 | 3.2:+25751258 | MS.gene63562:CDS |
AGACAAGATGGCTATCATGA+AGG | 0.630297 | 3.2:+25753415 | MS.gene63562:CDS |
GGACGAAAGCAGTAATAGGT+CGG | 0.635029 | 3.2:-25751184 | None:intergenic |
TGTTTGTCATACTGCCATGC+CGG | 0.635666 | 3.2:+25752202 | MS.gene63562:CDS |
GATTCTCACATTATTTGTCG+CGG | 0.636103 | 3.2:+25756076 | MS.gene63562:CDS |
CGCTGTGCGATACTTCACCT+TGG | 0.640777 | 3.2:+25755917 | MS.gene63562:CDS |
GATGTAGGTGTTGGAATCAG+TGG | 0.648525 | 3.2:+25754208 | MS.gene63562:CDS |
GCAAGCCATTGGTAGTAGGT+CGG | 0.650019 | 3.2:+25752034 | MS.gene63562:CDS |
AAGCTAAGATACCAGCAACA+AGG | 0.652050 | 3.2:-25750078 | None:intergenic |
TACGGAGTGGAAGAATCTCA+AGG | 0.656618 | 3.2:+25751119 | MS.gene63562:CDS |
AGCGAAAATTACAGTCACCA+TGG | 0.656927 | 3.2:+25752929 | MS.gene63562:CDS |
CATCTTGGTCAAAGACCCCA+AGG | 0.658958 | 3.2:-25754954 | None:intergenic |
CAAGCATTAGAGAAGGATGG+AGG | 0.659207 | 3.2:+25753392 | MS.gene63562:CDS |
TCAAACTTGAATGAAGAACT+CGG | 0.661344 | 3.2:+25751897 | MS.gene63562:CDS |
GGATCCGGTTTCTGGCAATG+AGG | 0.662297 | 3.2:+25752358 | MS.gene63562:CDS |
GTTGAAACGATGAACTTGGA+TGG | 0.664384 | 3.2:+25751231 | MS.gene63562:CDS |
CAGAGCAAATGCTTGCTGAG+AGG | 0.665647 | 3.2:-25753647 | None:intergenic |
AGAAGACAAGCTCCAAAATG+GGG | 0.671624 | 3.2:+25753025 | MS.gene63562:CDS |
CTTTACTGGTCACGACACGA+AGG | 0.680986 | 3.2:+25751485 | MS.gene63562:CDS |
ATGGACATTGGTGTTACAGG+AGG | 0.686829 | 3.2:+25754421 | MS.gene63562:CDS |
AAAGCAGTAATAGGTCGGCA+GGG | 0.688009 | 3.2:-25751179 | None:intergenic |
GGTGATGGAGCTAATGACGT+GGG | 0.688269 | 3.2:+25754169 | MS.gene63562:CDS |
GGTGCAACTATGGTGAAGGA+AGG | 0.698242 | 3.2:+25750160 | MS.gene63562:CDS |
AATGGCAACATGTTGTACCA+AGG | 0.698501 | 3.2:-25755934 | None:intergenic |
TTCTGTATAACATCTGCACG+AGG | 0.698773 | 3.2:-25752161 | None:intergenic |
GCTCAACCTCTGTGACACCA+CGG | 0.705887 | 3.2:-25752013 | None:intergenic |
ATTCACAGATTGGAAGACAA+GGG | 0.715792 | 3.2:+25749897 | MS.gene63562:CDS |
TTACAGGAGGATGTCCACAA+TGG | 0.740764 | 3.2:+25754434 | MS.gene63562:CDS |
ATCTTGGTCAAAGACCCCAA+GGG | 0.742412 | 3.2:-25754953 | None:intergenic |
TTATGGCCGTGGTGTCACAG+AGG | 0.763255 | 3.2:+25752007 | MS.gene63562:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATTAAACAAAAATATCA+TGG | - | chr3.2:25755666-25755685 | None:intergenic | 10.0% |
!! | AATTAAAATAGTTTAAATGA+AGG | - | chr3.2:25753893-25753912 | None:intergenic | 10.0% |
!! | ATTGAGTAAAAAATAAAAAT+TGG | - | chr3.2:25753917-25753936 | None:intergenic | 10.0% |
!! | AACAAAAATAAGGAAAAATA+AGG | - | chr3.2:25753843-25753862 | None:intergenic | 15.0% |
!! | AGCAAAAAAAAAATATAGTT+AGG | - | chr3.2:25753118-25753137 | None:intergenic | 15.0% |
!! | ATAAAATTAAAACCTTTGAT+TGG | - | chr3.2:25752104-25752123 | None:intergenic | 15.0% |
!! | ATCTTAACATTCAATATATT+TGG | + | chr3.2:25754475-25754494 | MS.gene63562:intron | 15.0% |
!! | TAAACTATAAATGATATAAC+TGG | + | chr3.2:25754000-25754019 | MS.gene63562:intron | 15.0% |
!! | TATCAAATCTACTAAAATTA+GGG | + | chr3.2:25755554-25755573 | MS.gene63562:intron | 15.0% |
!! | TCTTAACATTCAATATATTT+GGG | + | chr3.2:25754476-25754495 | MS.gene63562:intron | 15.0% |
!! | TTATCAAATCTACTAAAATT+AGG | + | chr3.2:25755553-25755572 | MS.gene63562:intron | 15.0% |
!! | TTTATTCATGTTAAATAATG+CGG | + | chr3.2:25752504-25752523 | MS.gene63562:intron | 15.0% |
!!! | AACGAAACATTTTAATAAAA+CGG | - | chr3.2:25754315-25754334 | None:intergenic | 15.0% |
!!! | AACTATATTTTTTTTTTGCT+AGG | + | chr3.2:25753118-25753137 | MS.gene63562:intron | 15.0% |
!!! | ATAAAATAAATTTTGATGCA+TGG | - | chr3.2:25752489-25752508 | None:intergenic | 15.0% |
!!! | GCTTTTTGAATTAATTTTAT+TGG | + | chr3.2:25754083-25754102 | MS.gene63562:intron | 15.0% |
!!! | TTATTTTTCCTTATTTTTGT+TGG | + | chr3.2:25753842-25753861 | MS.gene63562:intron | 15.0% |
!! | AAATATAGTGAAGATAAAGA+AGG | + | chr3.2:25751146-25751165 | MS.gene63562:CDS | 20.0% |
!! | AAGATTATCTACTTCTTATT+TGG | + | chr3.2:25751567-25751586 | MS.gene63562:CDS | 20.0% |
!! | AATAAACTGAAAACAACTTA+TGG | - | chr3.2:25754593-25754612 | None:intergenic | 20.0% |
!! | ATACAAGAGTCATAAATATA+AGG | + | chr3.2:25750862-25750881 | MS.gene63562:intron | 20.0% |
!! | ATAGATGAAAGAATAATGAA+CGG | + | chr3.2:25752122-25752141 | MS.gene63562:CDS | 20.0% |
!! | GAAGATTAATATTTATCAGT+TGG | + | chr3.2:25753073-25753092 | MS.gene63562:intron | 20.0% |
!! | GTAAATAGAGTAATTACATT+CGG | - | chr3.2:25750931-25750950 | None:intergenic | 20.0% |
!! | TTCTACAAGAATATTACATT+TGG | + | chr3.2:25754820-25754839 | MS.gene63562:CDS | 20.0% |
!!! | AAACTTTTAATATGAAGTGT+TGG | + | chr3.2:25755196-25755215 | MS.gene63562:intron | 20.0% |
!!! | AGAAGTGACAAAATTTTATT+TGG | - | chr3.2:25753965-25753984 | None:intergenic | 20.0% |
!!! | AGTAACTAATTTCATTTTGT+AGG | + | chr3.2:25752543-25752562 | MS.gene63562:intron | 20.0% |
!!! | CATGAAGGTAAATAAATTTT+AGG | + | chr3.2:25753430-25753449 | MS.gene63562:intron | 20.0% |
!!! | TATGCATTTTCATTTTACAA+TGG | + | chr3.2:25753249-25753268 | MS.gene63562:intron | 20.0% |
!!! | TTATTTTTCCAAATTCTTAC+CGG | - | chr3.2:25755106-25755125 | None:intergenic | 20.0% |
!!! | TTGTTTTTAATTGCCTTTAT+TGG | + | chr3.2:25751594-25751613 | MS.gene63562:CDS | 20.0% |
!!! | TTTTAGAATTCAATAGTTCA+AGG | + | chr3.2:25752585-25752604 | MS.gene63562:CDS | 20.0% |
! | AAAGAGAATAGATCCAATAA+AGG | - | chr3.2:25751610-25751629 | None:intergenic | 25.0% |
! | AAATAATGTGAGAATCCAAA+AGG | - | chr3.2:25756072-25756091 | None:intergenic | 25.0% |
! | AAATATCAGAAAAGATTGAG+AGG | + | chr3.2:25752973-25752992 | MS.gene63562:CDS | 25.0% |
! | AAATGATATAACTGGCAAAA+CGG | + | chr3.2:25754008-25754027 | MS.gene63562:intron | 25.0% |
! | AACAAATGCTCAAATTTGTA+AGG | - | chr3.2:25750374-25750393 | None:intergenic | 25.0% |
! | AATATTATACCCAATGTTGA+TGG | - | chr3.2:25753219-25753238 | None:intergenic | 25.0% |
! | ACAAGCTAGAATTAAGATAT+GGG | + | chr3.2:25753166-25753185 | MS.gene63562:CDS | 25.0% |
! | ACTTATTTGAATTTATCTGC+TGG | + | chr3.2:25754512-25754531 | MS.gene63562:intron | 25.0% |
! | AGAAGAGTTATATGTCATAA+AGG | + | chr3.2:25751078-25751097 | MS.gene63562:CDS | 25.0% |
! | AGTAACTTCTTCATTAAATG+AGG | + | chr3.2:25751287-25751306 | MS.gene63562:CDS | 25.0% |
! | ATACAATCAGAATATTCACA+CGG | - | chr3.2:25750556-25750575 | None:intergenic | 25.0% |
! | ATAGATGACAACATATTAGA+TGG | - | chr3.2:25755021-25755040 | None:intergenic | 25.0% |
! | ATTATGCTGATAATTCTGTT+AGG | + | chr3.2:25749978-25749997 | MS.gene63562:CDS | 25.0% |
! | CAATTCTATTGAGAAATACA+AGG | - | chr3.2:25751793-25751812 | None:intergenic | 25.0% |
! | CTACAAGCAATAACTAAATT+AGG | - | chr3.2:25752463-25752482 | None:intergenic | 25.0% |
! | CTTATTTGAATTTATCTGCT+GGG | + | chr3.2:25754513-25754532 | MS.gene63562:intron | 25.0% |
! | CTTGTATTTCTCAATAGAAT+TGG | + | chr3.2:25751791-25751810 | MS.gene63562:CDS | 25.0% |
! | GATTAATGAATATGCTTTGA+AGG | - | chr3.2:25751824-25751843 | None:intergenic | 25.0% |
! | GCAGAAGAAGAAAATTATTA+TGG | - | chr3.2:25755781-25755800 | None:intergenic | 25.0% |
! | GTAAAACTTGAAAATATCGA+AGG | - | chr3.2:25752702-25752721 | None:intergenic | 25.0% |
! | GTTATATAATCTGAATCGTT+TGG | - | chr3.2:25750987-25751006 | None:intergenic | 25.0% |
! | TAAATCTGTTTATCCAATCA+AGG | + | chr3.2:25754739-25754758 | MS.gene63562:intron | 25.0% |
! | TAATATGTACTATGAAGAAC+TGG | + | chr3.2:25751851-25751870 | MS.gene63562:CDS | 25.0% |
! | TATGACAAACAGACAATAAA+CGG | - | chr3.2:25752193-25752212 | None:intergenic | 25.0% |
! | TATTTATTCGTGTTTGCTTA+TGG | + | chr3.2:25755978-25755997 | MS.gene63562:CDS | 25.0% |
! | TCTGTTATATAATAGCATTC+CGG | + | chr3.2:25755275-25755294 | MS.gene63562:intron | 25.0% |
! | TTTATTGGATCTATTCTCTT+TGG | + | chr3.2:25751609-25751628 | MS.gene63562:CDS | 25.0% |
! | TTTATTTCAATAAACTCTCC+AGG | + | chr3.2:25754607-25754626 | MS.gene63562:intron | 25.0% |
! | TTTCACTCTATTCTTATATG+AGG | + | chr3.2:25754843-25754862 | MS.gene63562:CDS | 25.0% |
!! | AAAGAGTACAAATTTGCATT+TGG | - | chr3.2:25751357-25751376 | None:intergenic | 25.0% |
!! | ACAAATTTGAAGCTAAAACA+AGG | + | chr3.2:25751258-25751277 | MS.gene63562:CDS | 25.0% |
!! | GAAATGACATTTTAGATTCA+AGG | + | chr3.2:25750281-25750300 | MS.gene63562:intron | 25.0% |
!! | TAGATTTGAATCAGGTTTTA+AGG | + | chr3.2:25749955-25749974 | MS.gene63562:CDS | 25.0% |
!! | TTTTTGACGATTCATGTTTT+AGG | + | chr3.2:25753558-25753577 | MS.gene63562:intron | 25.0% |
!!! | AAATTTTCACTTGTGCTATT+TGG | - | chr3.2:25753525-25753544 | None:intergenic | 25.0% |
!!! | ATCTGTTTTTCATTTCTTGA+CGG | + | chr3.2:25751734-25751753 | MS.gene63562:CDS | 25.0% |
!!! | CATTTTAATAAAACGGTACA+TGG | - | chr3.2:25754308-25754327 | None:intergenic | 25.0% |
!!! | CGCATGTGAAATTATTTTTT+TGG | - | chr3.2:25753054-25753073 | None:intergenic | 25.0% |
!!! | TCTTTTAGGATCAAAGAAAA+TGG | - | chr3.2:25751703-25751722 | None:intergenic | 25.0% |
!!! | TGGGTTTTAAATTCTACAAA+AGG | + | chr3.2:25752306-25752325 | MS.gene63562:CDS | 25.0% |
!!! | TTACGTTATTTTTATGCAGA+AGG | + | chr3.2:25750947-25750966 | MS.gene63562:intron | 25.0% |
AAAGAATAATGAACGGAAAC+TGG | + | chr3.2:25752129-25752148 | MS.gene63562:CDS | 30.0% | |
AACACTAATTGAAGCTACAT+AGG | - | chr3.2:25753501-25753520 | None:intergenic | 30.0% | |
AACTGGAATCAATTGATATC+AGG | + | chr3.2:25752057-25752076 | MS.gene63562:CDS | 30.0% | |
AATCAATGATTCATGATCCA+TGG | - | chr3.2:25752949-25752968 | None:intergenic | 30.0% | |
AATGGAGTTCATCAAATGTT+CGG | + | chr3.2:25751971-25751990 | MS.gene63562:CDS | 30.0% | |
AATTTCTATTTCCTTGTTGC+TGG | + | chr3.2:25750067-25750086 | MS.gene63562:CDS | 30.0% | |
ACAACGGAATTATGAAAAGA+TGG | + | chr3.2:25751655-25751674 | MS.gene63562:CDS | 30.0% | |
ACAATCCTTTCTGATAAAAC+TGG | + | chr3.2:25751930-25751949 | MS.gene63562:CDS | 30.0% | |
ACTGGAATCAATTGATATCA+GGG | + | chr3.2:25752058-25752077 | MS.gene63562:CDS | 30.0% | |
AGAGTTATATGTCATAAAGG+TGG | + | chr3.2:25751081-25751100 | MS.gene63562:CDS | 30.0% | |
AGTCAAACTAATTGCATGTA+AGG | - | chr3.2:25754656-25754675 | None:intergenic | 30.0% | |
AGTCGATATGCTAAATGAAA+AGG | - | chr3.2:25752724-25752743 | None:intergenic | 30.0% | |
ATATTGCAATTGCACAATTC+CGG | + | chr3.2:25754373-25754392 | MS.gene63562:CDS | 30.0% | |
ATGGAATCATTGTATGTGTT+TGG | - | chr3.2:25755647-25755666 | None:intergenic | 30.0% | |
ATTGAGAAATACAAGGAGAT+GGG | - | chr3.2:25751786-25751805 | None:intergenic | 30.0% | |
CAACAAGATAGATTTGAATC+AGG | + | chr3.2:25749947-25749966 | MS.gene63562:CDS | 30.0% | |
CACAAGCTAGAATTAAGATA+TGG | + | chr3.2:25753165-25753184 | MS.gene63562:CDS | 30.0% | |
CGTAATACAGACTTCATATT+CGG | + | chr3.2:25751453-25751472 | MS.gene63562:CDS | 30.0% | |
GAAAGATTACTTCTTGTACA+TGG | + | chr3.2:25754402-25754421 | MS.gene63562:CDS | 30.0% | |
GAAGAAGTTGTATAGCATTA+AGG | - | chr3.2:25751760-25751779 | None:intergenic | 30.0% | |
GGAGTTTGAAGAAAAAACTT+TGG | + | chr3.2:25752803-25752822 | MS.gene63562:CDS | 30.0% | |
GGTAAAACAACATTAGCTAT+CGG | + | chr3.2:25754148-25754167 | MS.gene63562:CDS | 30.0% | |
GTGATAGTTAAAGATGAAGA+CGG | + | chr3.2:25752620-25752639 | MS.gene63562:CDS | 30.0% | |
GTGTACAAAATGTCCTATTT+AGG | + | chr3.2:25755712-25755731 | MS.gene63562:CDS | 30.0% | |
TACAAAATGTCCTATTTAGG+TGG | + | chr3.2:25755715-25755734 | MS.gene63562:CDS | 30.0% | |
TATTGAGAAATACAAGGAGA+TGG | - | chr3.2:25751787-25751806 | None:intergenic | 30.0% | |
TCAAACTTGAATGAAGAACT+CGG | + | chr3.2:25751897-25751916 | MS.gene63562:CDS | 30.0% | |
TCAGAACAGTTTATCAATGA+TGG | + | chr3.2:25752331-25752350 | MS.gene63562:CDS | 30.0% | |
TCAGTTGCAAAACAAACTTA+AGG | + | chr3.2:25750671-25750690 | MS.gene63562:intron | 30.0% | |
TCATGTTAAATAATGCGGAA+AGG | + | chr3.2:25752509-25752528 | MS.gene63562:intron | 30.0% | |
TGAAATTCAAGCATTAGAGA+AGG | + | chr3.2:25753385-25753404 | MS.gene63562:CDS | 30.0% | |
TGATAGTTAAAGATGAAGAC+GGG | + | chr3.2:25752621-25752640 | MS.gene63562:CDS | 30.0% | |
TTCTCTAATGCTTGAATTTC+AGG | - | chr3.2:25753386-25753405 | None:intergenic | 30.0% | |
TTTCTACATGTTGAGAAAGA+GGG | + | chr3.2:25750767-25750786 | MS.gene63562:intron | 30.0% | |
TTTGAATGATCTTACCATTG+TGG | - | chr3.2:25754451-25754470 | None:intergenic | 30.0% | |
! | AGAATTTTGTTGCTCTGTAA+AGG | + | chr3.2:25752644-25752663 | MS.gene63562:CDS | 30.0% |
! | ATCTAAGATCACTTTCTTAC+TGG | + | chr3.2:25750402-25750421 | MS.gene63562:intron | 30.0% |
! | CAAATTTGTACTCTTTTGTC+GGG | + | chr3.2:25751361-25751380 | MS.gene63562:CDS | 30.0% |
! | CTTCATTCAAGTTTGAAGTA+CGG | - | chr3.2:25751893-25751912 | None:intergenic | 30.0% |
! | GCAAATTTGTACTCTTTTGT+CGG | + | chr3.2:25751360-25751379 | MS.gene63562:CDS | 30.0% |
! | GCTGCTTATGATTATTGTTT+TGG | + | chr3.2:25754057-25754076 | MS.gene63562:intron | 30.0% |
! | TGGTGGCAATTTTGAATATA+CGG | + | chr3.2:25751101-25751120 | MS.gene63562:CDS | 30.0% |
! | TTCATTCAAGTTTGAAGTAC+GGG | - | chr3.2:25751892-25751911 | None:intergenic | 30.0% |
! | TTTAGGATCAAAGAAAATGG+TGG | - | chr3.2:25751700-25751719 | None:intergenic | 30.0% |
! | TTTGAAGCTAAAACAAGGTT+TGG | + | chr3.2:25751263-25751282 | MS.gene63562:CDS | 30.0% |
! | TTTTCTACATGTTGAGAAAG+AGG | + | chr3.2:25750766-25750785 | MS.gene63562:intron | 30.0% |
!! | AAACAACCACATTTTAATCG+TGG | - | chr3.2:25756132-25756151 | None:intergenic | 30.0% |
!! | AAGTTCCAGTTTTATCAGAA+AGG | - | chr3.2:25751938-25751957 | None:intergenic | 30.0% |
!! | ATTAAGATATGGGTTTTGAC+TGG | + | chr3.2:25753176-25753195 | MS.gene63562:CDS | 30.0% |
!! | ATTCATGTTTTAGGCATCAA+GGG | + | chr3.2:25753567-25753586 | MS.gene63562:intron | 30.0% |
!! | TATTTTTATGCAGAAGGAAG+AGG | + | chr3.2:25750953-25750972 | MS.gene63562:intron | 30.0% |
!!! | TATTACGAAGTTTTGAGTCT+CGG | - | chr3.2:25751440-25751459 | None:intergenic | 30.0% |
!!! | TTAAGATATGGGTTTTGACT+GGG | + | chr3.2:25753177-25753196 | MS.gene63562:CDS | 30.0% |
!!! | TTTCCTTATTTTTGTTGGTG+TGG | + | chr3.2:25753847-25753866 | MS.gene63562:intron | 30.0% |
!!! | TTTTTTTGGTTACCCCATTT+TGG | - | chr3.2:25753040-25753059 | None:intergenic | 30.0% |
AAAAACCAGTCATTGTATGC+AGG | - | chr3.2:25754892-25754911 | None:intergenic | 35.0% | |
AAACTGCTTTCTGCATCTAA+AGG | + | chr3.2:25753622-25753641 | MS.gene63562:CDS | 35.0% | |
AACTGCTCAAACAATGACTT+AGG | - | chr3.2:25750034-25750053 | None:intergenic | 35.0% | |
AACTGCTTTCTGCATCTAAA+GGG | + | chr3.2:25753623-25753642 | MS.gene63562:CDS | 35.0% | |
AAGCACTTGTGAGACTATTT+AGG | + | chr3.2:25754538-25754557 | MS.gene63562:intron | 35.0% | |
AAGCCACACCAACAAAAATA+AGG | - | chr3.2:25753853-25753872 | None:intergenic | 35.0% | |
AAGGACAAATTGTCAAGTAG+AGG | - | chr3.2:25753824-25753843 | None:intergenic | 35.0% | |
AATAGCAATAGAACCCCAAA+TGG | - | chr3.2:25755955-25755974 | None:intergenic | 35.0% | |
ACGTAAACAGAGAAAAGAGT+TGG | - | chr3.2:25752411-25752430 | None:intergenic | 35.0% | |
ACTAAACGTGACTTGAACAA+CGG | + | chr3.2:25751639-25751658 | MS.gene63562:CDS | 35.0% | |
AGAATCCAAAAGGAATCTGA+TGG | - | chr3.2:25756062-25756081 | None:intergenic | 35.0% | |
AGGACAAATTGTCAAGTAGA+GGG | - | chr3.2:25753823-25753842 | None:intergenic | 35.0% | |
AGTCATTGTTTGAGCAGTTT+AGG | + | chr3.2:25750035-25750054 | MS.gene63562:CDS | 35.0% | |
ATAGCACTAACAGCAGTATA+AGG | - | chr3.2:25750118-25750137 | None:intergenic | 35.0% | |
ATGTCTAAATTACACAGGAG+AGG | + | chr3.2:25750825-25750844 | MS.gene63562:intron | 35.0% | |
ATTACAAGATAACTGCAGGT+AGG | + | chr3.2:25750598-25750617 | MS.gene63562:intron | 35.0% | |
ATTCAAGCATTAGAGAAGGA+TGG | + | chr3.2:25753389-25753408 | MS.gene63562:CDS | 35.0% | |
ATTCACAGATTGGAAGACAA+GGG | + | chr3.2:25749897-25749916 | MS.gene63562:CDS | 35.0% | |
ATTGTTTGAGCAGTTTAGGA+GGG | + | chr3.2:25750039-25750058 | MS.gene63562:CDS | 35.0% | |
ATTTGTTCTGCAGGATATTG+AGG | + | chr3.2:25751047-25751066 | MS.gene63562:intron | 35.0% | |
CAGAAAGGATTGTGTCAATT+TGG | - | chr3.2:25751923-25751942 | None:intergenic | 35.0% | |
CTGTCTTCTCTTTCATAATC+CGG | - | chr3.2:25755297-25755316 | None:intergenic | 35.0% | |
CTTCCTTTAGCTGTTATAGT+TGG | + | chr3.2:25750139-25750158 | MS.gene63562:CDS | 35.0% | |
GAAATGAAAAACAGATGCTG+CGG | - | chr3.2:25751730-25751749 | None:intergenic | 35.0% | |
GAAGACTACTGATACTGAAT+AGG | + | chr3.2:25756196-25756215 | MS.gene63562:CDS | 35.0% | |
GAAGTAATCTTTCCAGATAC+CGG | - | chr3.2:25754395-25754414 | None:intergenic | 35.0% | |
GAATGCTCTCTCTTAAACTT+TGG | - | chr3.2:25749881-25749900 | None:intergenic | 35.0% | |
GATCGAAAAGAACCAATCAA+AGG | + | chr3.2:25752089-25752108 | MS.gene63562:CDS | 35.0% | |
GATCTAGCTAATAACATAGC+TGG | - | chr3.2:25750707-25750726 | None:intergenic | 35.0% | |
GATTCTCACATTATTTGTCG+CGG | + | chr3.2:25756076-25756095 | MS.gene63562:CDS | 35.0% | |
GTACAATGGATGAGGTATAA+GGG | + | chr3.2:25756170-25756189 | MS.gene63562:CDS | 35.0% | |
GTGTATCTTCAGATATCTGA+AGG | + | chr3.2:25753595-25753614 | MS.gene63562:CDS | 35.0% | |
GTTATATGTCATAAAGGTGG+TGG | + | chr3.2:25751084-25751103 | MS.gene63562:CDS | 35.0% | |
GTTGATTACAAGATAACTGC+AGG | + | chr3.2:25750594-25750613 | MS.gene63562:intron | 35.0% | |
GTTTCCTATGCATCATGAAA+GGG | + | chr3.2:25756148-25756167 | MS.gene63562:CDS | 35.0% | |
TACTTCTTGTACATGGACAT+TGG | + | chr3.2:25754409-25754428 | MS.gene63562:CDS | 35.0% | |
TAGAAGACAAGCTCCAAAAT+GGG | + | chr3.2:25753024-25753043 | MS.gene63562:CDS | 35.0% | |
TAGAGGGAGAAACAAAGAAA+AGG | - | chr3.2:25753807-25753826 | None:intergenic | 35.0% | |
TGAGCATCCAACTTAGAATT+CGG | - | chr3.2:25755743-25755762 | None:intergenic | 35.0% | |
TGCACGGAAATTAAGATTCA+AGG | - | chr3.2:25752749-25752768 | None:intergenic | 35.0% | |
TGTTTCCTATGCATCATGAA+AGG | + | chr3.2:25756147-25756166 | MS.gene63562:CDS | 35.0% | |
TTACTGTGCAATTCGAGTAA+CGG | - | chr3.2:25750893-25750912 | None:intergenic | 35.0% | |
TTATGAAAGAGAAGACAGAG+CGG | + | chr3.2:25755299-25755318 | MS.gene63562:intron | 35.0% | |
TTCAAACTCCCTTCCATTAA+TGG | - | chr3.2:25752793-25752812 | None:intergenic | 35.0% | |
TTCGCATGTCTAAATTACAC+AGG | + | chr3.2:25750820-25750839 | MS.gene63562:intron | 35.0% | |
TTCTTCATCAAGTTCACGAT+AGG | - | chr3.2:25752877-25752896 | None:intergenic | 35.0% | |
TTCTTCTGCACTAAAGCAAT+AGG | + | chr3.2:25755792-25755811 | MS.gene63562:CDS | 35.0% | |
TTGAAAATATCGAAGGCTAC+AGG | - | chr3.2:25752695-25752714 | None:intergenic | 35.0% | |
TTTCCTATCTTGTACCAAGA+AGG | + | chr3.2:25755690-25755709 | MS.gene63562:CDS | 35.0% | |
TTTGAAAGGCTTGCCATTAA+TGG | + | chr3.2:25752777-25752796 | MS.gene63562:CDS | 35.0% | |
! | AAGAAAATGGTGGAATCATC+TGG | - | chr3.2:25751690-25751709 | None:intergenic | 35.0% |
! | AGATTTTCGTCGGAAAAAAC+AGG | + | chr3.2:25750189-25750208 | MS.gene63562:CDS | 35.0% |
! | ATTCTAAGTTGGATGCTCAA+CGG | + | chr3.2:25755744-25755763 | MS.gene63562:CDS | 35.0% |
! | CAGTTTATCAATGATGGAGT+TGG | + | chr3.2:25752337-25752356 | MS.gene63562:CDS | 35.0% |
! | GCAATTTTGAATATACGGAG+TGG | + | chr3.2:25751106-25751125 | MS.gene63562:CDS | 35.0% |
! | GGATCATGAATCATTGATTG+AGG | + | chr3.2:25752950-25752969 | MS.gene63562:CDS | 35.0% |
! | GTTACTAGATTGGTCAAAGA+AGG | + | chr3.2:25754121-25754140 | MS.gene63562:CDS | 35.0% |
! | TGTTATAGTTGGTGCAACTA+TGG | + | chr3.2:25750150-25750169 | MS.gene63562:CDS | 35.0% |
! | TTGCTTTGGATTCTGTTTCT+CGG | + | chr3.2:25750342-25750361 | MS.gene63562:intron | 35.0% |
! | TTTGGGGTTCTATTGCTATT+TGG | + | chr3.2:25755955-25755974 | MS.gene63562:CDS | 35.0% |
!! | AACAAACTTAAGGCCTTGTT+TGG | + | chr3.2:25750681-25750700 | MS.gene63562:intron | 35.0% |
!! | AACTTTGACTTGCAACTCAA+TGG | + | chr3.2:25751953-25751972 | MS.gene63562:CDS | 35.0% |
!! | ATGAAGTGTTGGTGCTATAT+AGG | + | chr3.2:25755207-25755226 | MS.gene63562:intron | 35.0% |
!! | CATGTATACTTGTGTCGTTT+GGG | + | chr3.2:25755872-25755891 | MS.gene63562:CDS | 35.0% |
!! | GATTCATGTTTTAGGCATCA+AGG | + | chr3.2:25753566-25753585 | MS.gene63562:intron | 35.0% |
!! | GTTGTTTTCATAAGCTATCC+TGG | - | chr3.2:25754628-25754647 | None:intergenic | 35.0% |
!! | TGTTGGTGCTATATAGGTTT+AGG | + | chr3.2:25755213-25755232 | MS.gene63562:intron | 35.0% |
!!! | AAATGTGGTTTTAGAGTGGT+AGG | - | chr3.2:25755605-25755624 | None:intergenic | 35.0% |
!!! | AAGGTGTTGAAGATTTTCGT+CGG | + | chr3.2:25750179-25750198 | MS.gene63562:CDS | 35.0% |
!!! | AATGTGGTTTTAGAGTGGTA+GGG | - | chr3.2:25755604-25755623 | None:intergenic | 35.0% |
!!! | CATTGTATGTGTTTGGCTTT+TGG | - | chr3.2:25755640-25755659 | None:intergenic | 35.0% |
!!! | TAAGATATGGGTTTTGACTG+GGG | + | chr3.2:25753178-25753197 | MS.gene63562:CDS | 35.0% |
AAAGGCTTGCCATTAATGGA+AGG | + | chr3.2:25752781-25752800 | MS.gene63562:CDS | 40.0% | |
AACTGGACGAAAGCAGTAAT+AGG | - | chr3.2:25751191-25751210 | None:intergenic | 40.0% | |
AAGCTAAGATACCAGCAACA+AGG | - | chr3.2:25750081-25750100 | None:intergenic | 40.0% | |
AAGGCTTGCCATTAATGGAA+GGG | + | chr3.2:25752782-25752801 | MS.gene63562:CDS | 40.0% | |
AATCATAAGCAGCATGCACA+CGG | - | chr3.2:25754050-25754069 | None:intergenic | 40.0% | |
AATGGCAACATGTTGTACCA+AGG | - | chr3.2:25755937-25755956 | None:intergenic | 40.0% | |
AATTGCACAATTCCGGTATC+TGG | + | chr3.2:25754380-25754399 | MS.gene63562:CDS | 40.0% | |
ACAACATTAGCTATCGGTGA+TGG | + | chr3.2:25754154-25754173 | MS.gene63562:CDS | 40.0% | |
ACACCTTCTTGGTACAAGAT+AGG | - | chr3.2:25755696-25755715 | None:intergenic | 40.0% | |
AGAAGACAAGCTCCAAAATG+GGG | + | chr3.2:25753025-25753044 | MS.gene63562:CDS | 40.0% | |
AGACAAGATGGCTATCATGA+AGG | + | chr3.2:25753415-25753434 | MS.gene63562:CDS | 40.0% | |
AGCGAAAATTACAGTCACCA+TGG | + | chr3.2:25752929-25752948 | MS.gene63562:CDS | 40.0% | |
AGTACCTAGCAGATACATCT+TGG | - | chr3.2:25754972-25754991 | None:intergenic | 40.0% | |
AGTGTTCGATACAACACATG+TGG | - | chr3.2:25755156-25755175 | None:intergenic | 40.0% | |
ATAACATAGCTGGCCAAACA+AGG | - | chr3.2:25750697-25750716 | None:intergenic | 40.0% | |
ATGCTTCAAGAAGCTGATGT+AGG | + | chr3.2:25754193-25754212 | MS.gene63562:CDS | 40.0% | |
CATTCACAGATTGGAAGACA+AGG | + | chr3.2:25749896-25749915 | MS.gene63562:CDS | 40.0% | |
CATTGTTTGAGCAGTTTAGG+AGG | + | chr3.2:25750038-25750057 | MS.gene63562:CDS | 40.0% | |
CCAAACGACACAAGTATACA+TGG | - | chr3.2:25755874-25755893 | None:intergenic | 40.0% | |
CTACGTTGAAACGATGAACT+TGG | + | chr3.2:25751227-25751246 | MS.gene63562:CDS | 40.0% | |
CTATGAAGAACTGGACAAAC+CGG | + | chr3.2:25751860-25751879 | MS.gene63562:CDS | 40.0% | |
CTGTTTATCCAATCAAGGCA+AGG | + | chr3.2:25754744-25754763 | MS.gene63562:intron | 40.0% | |
CTTTCAAACATGACACTGCA+CGG | - | chr3.2:25752765-25752784 | None:intergenic | 40.0% | |
GAGAGGAATCTAATCCTTCT+CGG | + | chr3.2:25752990-25753009 | MS.gene63562:CDS | 40.0% | |
GAGCAAAATCGAGATGAAGA+TGG | + | chr3.2:25751542-25751561 | MS.gene63562:CDS | 40.0% | |
GCACCAACTATAACAGCTAA+AGG | - | chr3.2:25750145-25750164 | None:intergenic | 40.0% | |
GCAGTTGTTGAAAAGCTTGA+AGG | - | chr3.2:25756011-25756030 | None:intergenic | 40.0% | |
GCATTTGCTCTGATAATCGA+TGG | + | chr3.2:25753658-25753677 | MS.gene63562:CDS | 40.0% | |
GGTACAATGGATGAGGTATA+AGG | + | chr3.2:25756169-25756188 | MS.gene63562:CDS | 40.0% | |
GTAGAAGACAAGCTCCAAAA+TGG | + | chr3.2:25753023-25753042 | MS.gene63562:CDS | 40.0% | |
GTCACTTGTTTATGCTCTAG+AGG | + | chr3.2:25753684-25753703 | MS.gene63562:CDS | 40.0% | |
GTTGAAACGATGAACTTGGA+TGG | + | chr3.2:25751231-25751250 | MS.gene63562:CDS | 40.0% | |
TCATCAAATGTTCGGTTGCT+GGG | + | chr3.2:25751979-25751998 | MS.gene63562:CDS | 40.0% | |
TGCAATATCACTAGCCATGA+CGG | - | chr3.2:25754361-25754380 | None:intergenic | 40.0% | |
TGGTACAACATGTTGCCATT+TGG | + | chr3.2:25755937-25755956 | MS.gene63562:CDS | 40.0% | |
TGTACCCTTTCATGATGCAT+AGG | - | chr3.2:25756155-25756174 | None:intergenic | 40.0% | |
TTCATCAAATGTTCGGTTGC+TGG | + | chr3.2:25751978-25751997 | MS.gene63562:CDS | 40.0% | |
TTCTGTATAACATCTGCACG+AGG | - | chr3.2:25752164-25752183 | None:intergenic | 40.0% | |
TTGACCAAGATGTATCTGCT+AGG | + | chr3.2:25754965-25754984 | MS.gene63562:CDS | 40.0% | |
! | AGATTGGTCAAAGAAGGAAC+TGG | + | chr3.2:25754127-25754146 | MS.gene63562:CDS | 40.0% |
! | ATCAATGATGGAGTTGGATC+CGG | + | chr3.2:25752343-25752362 | MS.gene63562:CDS | 40.0% |
! | ATCACAAATGCTGCTTCATC+AGG | - | chr3.2:25752272-25752291 | None:intergenic | 40.0% |
! | ATGAAAGGGTACAATGGATG+AGG | + | chr3.2:25756162-25756181 | MS.gene63562:CDS | 40.0% |
! | ATTTTGCTCCTTTTCGAAGG+AGG | - | chr3.2:25751531-25751550 | None:intergenic | 40.0% |
! | CAAATGTATCAGCGTCGTTT+TGG | - | chr3.2:25750325-25750344 | None:intergenic | 40.0% |
! | CCATGTATACTTGTGTCGTT+TGG | + | chr3.2:25755871-25755890 | MS.gene63562:CDS | 40.0% |
! | GCAAGCTTTTCAATACACTC+AGG | - | chr3.2:25753146-25753165 | None:intergenic | 40.0% |
! | GGACATTTTGTACACCTTCT+TGG | - | chr3.2:25755707-25755726 | None:intergenic | 40.0% |
! | GGTACAACATGTTGCCATTT+GGG | + | chr3.2:25755938-25755957 | MS.gene63562:CDS | 40.0% |
! | GGTGACTGTAATTTTCGCTT+CGG | - | chr3.2:25752928-25752947 | None:intergenic | 40.0% |
! | GTACAACATGTTGCCATTTG+GGG | + | chr3.2:25755939-25755958 | MS.gene63562:CDS | 40.0% |
! | GTTTGTTAAATGTCCGACAC+CGG | - | chr3.2:25755180-25755199 | None:intergenic | 40.0% |
! | TCCTAGTATGTCTTTTCCAG+CGG | - | chr3.2:25755847-25755866 | None:intergenic | 40.0% |
! | TCGATTTTGCTCCTTTTCGA+AGG | - | chr3.2:25751534-25751553 | None:intergenic | 40.0% |
! | TGCATCATGAAAGGGTACAA+TGG | + | chr3.2:25756156-25756175 | MS.gene63562:CDS | 40.0% |
! | TTCTAAGTTGGATGCTCAAC+GGG | + | chr3.2:25755745-25755764 | MS.gene63562:CDS | 40.0% |
! | TTGCTCCATCAGATTCCTTT+TGG | + | chr3.2:25756054-25756073 | MS.gene63562:CDS | 40.0% |
! | TTGGGTTGTAAACCTACAGA+TGG | + | chr3.2:25755890-25755909 | MS.gene63562:CDS | 40.0% |
! | TTTCTGGCAATGAGGTTGAA+AGG | + | chr3.2:25752366-25752385 | MS.gene63562:CDS | 40.0% |
! | TTTTGCTCCTTTTCGAAGGA+GGG | - | chr3.2:25751530-25751549 | None:intergenic | 40.0% |
! | TTTTGTGACCTTGCCTTGAT+TGG | - | chr3.2:25754755-25754774 | None:intergenic | 40.0% |
!! | AAGAGAGAGCATTCACAGAT+TGG | + | chr3.2:25749887-25749906 | MS.gene63562:CDS | 40.0% |
!! | AGCTAACTGATTTGTTCTGC+AGG | + | chr3.2:25751038-25751057 | MS.gene63562:intron | 40.0% |
!! | GATTGGTTCTTTTCGATCAC+TGG | - | chr3.2:25752087-25752106 | None:intergenic | 40.0% |
!! | TACATGGACATTGGTGTTAC+AGG | + | chr3.2:25754418-25754437 | MS.gene63562:CDS | 40.0% |
!! | TGACAGCAGCTTTGAAATCA+TGG | - | chr3.2:25751323-25751342 | None:intergenic | 40.0% |
!! | TGGAAGACAAGGGTATTCTA+GGG | + | chr3.2:25749907-25749926 | MS.gene63562:CDS | 40.0% |
!! | TTGGAAGACAAGGGTATTCT+AGG | + | chr3.2:25749906-25749925 | MS.gene63562:CDS | 40.0% |
!!! | CGTCAAATGTGGTTTTAGAG+TGG | - | chr3.2:25755609-25755628 | None:intergenic | 40.0% |
!!! | GGTTTTGACTGGGGATAAAA+TGG | + | chr3.2:25753187-25753206 | MS.gene63562:CDS | 40.0% |
!!! | TGGTTTTGTGTCGTCAAATG+TGG | - | chr3.2:25755620-25755639 | None:intergenic | 40.0% |
AAAGCAGTAATAGGTCGGCA+GGG | - | chr3.2:25751182-25751201 | None:intergenic | 45.0% | |
ACACATGTGGTTGCATTCGA+TGG | - | chr3.2:25755143-25755162 | None:intergenic | 45.0% | |
ACCGCTGGAAAAGACATACT+AGG | + | chr3.2:25755843-25755862 | MS.gene63562:CDS | 45.0% | |
ATCGTGGAGCACGAAAAGTA+TGG | - | chr3.2:25756116-25756135 | None:intergenic | 45.0% | |
ATCTTGGTCAAAGACCCCAA+GGG | - | chr3.2:25754956-25754975 | None:intergenic | 45.0% | |
ATGGAGACTGCCATCAACAT+TGG | + | chr3.2:25753206-25753225 | MS.gene63562:CDS | 45.0% | |
CAAGAAGCTGATGTAGGTGT+TGG | + | chr3.2:25754199-25754218 | MS.gene63562:CDS | 45.0% | |
CAAGCATTAGAGAAGGATGG+AGG | + | chr3.2:25753392-25753411 | MS.gene63562:CDS | 45.0% | |
CATCAAATGTTCGGTTGCTG+GGG | + | chr3.2:25751980-25751999 | MS.gene63562:CDS | 45.0% | |
CGACAACACCGGTAAGAATT+TGG | + | chr3.2:25755095-25755114 | MS.gene63562:intron | 45.0% | |
CGACGCTGATACATTTGCTT+TGG | + | chr3.2:25750328-25750347 | MS.gene63562:intron | 45.0% | |
CGTGCAGTGTCATGTTTGAA+AGG | + | chr3.2:25752763-25752782 | MS.gene63562:intron | 45.0% | |
CGTGCTCCACGATTAAAATG+TGG | + | chr3.2:25756123-25756142 | MS.gene63562:CDS | 45.0% | |
CTTCAAGCCTTTGACGAGAA+CGG | + | chr3.2:25755816-25755835 | MS.gene63562:CDS | 45.0% | |
GAGGTGTATGCATCATTCTC+CGG | + | chr3.2:25754862-25754881 | MS.gene63562:CDS | 45.0% | |
GAGTGGAAGAATCTCAAGGT+AGG | + | chr3.2:25751123-25751142 | MS.gene63562:CDS | 45.0% | |
GGACGAAAGCAGTAATAGGT+CGG | - | chr3.2:25751187-25751206 | None:intergenic | 45.0% | |
GTGAGTGAATATGCTGATGC+AGG | + | chr3.2:25752831-25752850 | MS.gene63562:CDS | 45.0% | |
GTGATTGCTGCAAGAGAAGT+GGG | + | chr3.2:25752287-25752306 | MS.gene63562:CDS | 45.0% | |
TACGGAGTGGAAGAATCTCA+AGG | + | chr3.2:25751119-25751138 | MS.gene63562:CDS | 45.0% | |
TCAACCTCATTGCCAGAAAC+CGG | - | chr3.2:25752365-25752384 | None:intergenic | 45.0% | |
TGGAGACTGCCATCAACATT+GGG | + | chr3.2:25753207-25753226 | MS.gene63562:CDS | 45.0% | |
TGTGATTGCTGCAAGAGAAG+TGG | + | chr3.2:25752286-25752305 | MS.gene63562:CDS | 45.0% | |
TGTGTTGTATCGAACACTGC+CGG | + | chr3.2:25755158-25755177 | MS.gene63562:intron | 45.0% | |
TGTTTGTCATACTGCCATGC+CGG | + | chr3.2:25752202-25752221 | MS.gene63562:CDS | 45.0% | |
TTACAGGAGGATGTCCACAA+TGG | + | chr3.2:25754434-25754453 | MS.gene63562:CDS | 45.0% | |
TTCGGAGCAGTCATCTTTAC+TGG | + | chr3.2:25751471-25751490 | MS.gene63562:CDS | 45.0% | |
! | AGTTGGTGCAACTATGGTGA+AGG | + | chr3.2:25750156-25750175 | MS.gene63562:CDS | 45.0% |
! | GCACAGTTCAGGTTTAGATC+AGG | - | chr3.2:25750638-25750657 | None:intergenic | 45.0% |
! | GGTTTTTCCGTTCTCGTCAA+AGG | - | chr3.2:25755826-25755845 | None:intergenic | 45.0% |
! | GTTGGAATCAGTGGTGTTGA+AGG | + | chr3.2:25754217-25754236 | MS.gene63562:CDS | 45.0% |
! | TTGAGCAAGCCATTGGTAGT+AGG | + | chr3.2:25752030-25752049 | MS.gene63562:CDS | 45.0% |
! | TTTGCTCCTTTTCGAAGGAG+GGG | - | chr3.2:25751529-25751548 | None:intergenic | 45.0% |
!! | ATGGACATTGGTGTTACAGG+AGG | + | chr3.2:25754421-25754440 | MS.gene63562:CDS | 45.0% |
!! | GATGTAGGTGTTGGAATCAG+TGG | + | chr3.2:25754208-25754227 | MS.gene63562:CDS | 45.0% |
!! | TATCAGCGTCGTTTTGGTGT+CGG | - | chr3.2:25750319-25750338 | None:intergenic | 45.0% |
!! | TCGGGAGCATGGATTTTGAA+GGG | + | chr3.2:25751379-25751398 | MS.gene63562:CDS | 45.0% |
ACAGAGGTTGAGCAAGCCAT+TGG | + | chr3.2:25752023-25752042 | MS.gene63562:CDS | 50.0% | |
AGAAGCTGCTGAGGAGAAAG+TGG | - | chr3.2:25751414-25751433 | None:intergenic | 50.0% | |
ATGGAGTTGGATCCGGTTTC+TGG | + | chr3.2:25752350-25752369 | MS.gene63562:CDS | 50.0% | |
CAGTTCCGACCTACTACCAA+TGG | - | chr3.2:25752042-25752061 | None:intergenic | 50.0% | |
CATACCAGAGCCTTCTGCTT+TGG | - | chr3.2:25753778-25753797 | None:intergenic | 50.0% | |
CATCTTGGTCAAAGACCCCA+AGG | - | chr3.2:25754957-25754976 | None:intergenic | 50.0% | |
CGTTCTCGTCAAAGGCTTGA+AGG | - | chr3.2:25755818-25755837 | None:intergenic | 50.0% | |
CTTTACTGGTCACGACACGA+AGG | + | chr3.2:25751485-25751504 | MS.gene63562:CDS | 50.0% | |
GAAAGCAGTAATAGGTCGGC+AGG | - | chr3.2:25751183-25751202 | None:intergenic | 50.0% | |
GAAGGATGGAGGAGACAAGA+TGG | + | chr3.2:25753403-25753422 | MS.gene63562:CDS | 50.0% | |
GAATTCGGCGCCACCTAAAT+AGG | - | chr3.2:25755728-25755747 | None:intergenic | 50.0% | |
GACAGCCTGCATACAATGAC+TGG | + | chr3.2:25754884-25754903 | MS.gene63562:CDS | 50.0% | |
GAGCTTGTCTTCTACAGCAG+TGG | - | chr3.2:25753018-25753037 | None:intergenic | 50.0% | |
GCAGACTGCATCTTCGTAAC+TGG | - | chr3.2:25751208-25751227 | None:intergenic | 50.0% | |
GGTGCAACTATGGTGAAGGA+AGG | + | chr3.2:25750160-25750179 | MS.gene63562:CDS | 50.0% | |
GTCATTGTATGCAGGCTGTC+CGG | - | chr3.2:25754884-25754903 | None:intergenic | 50.0% | |
TGTCGTGTCAGTGTCGTGTT+TGG | - | chr3.2:25755080-25755099 | None:intergenic | 50.0% | |
TTGTATCCTCTCTCCTCCCT+AGG | + | chr3.2:25754335-25754354 | MS.gene63562:intron | 50.0% | |
! | ATCTGCTAGGTACTGCGTCA+AGG | + | chr3.2:25754978-25754997 | MS.gene63562:CDS | 50.0% |
! | CAGAGCAAATGCTTGCTGAG+AGG | - | chr3.2:25753650-25753669 | None:intergenic | 50.0% |
! | CAGTGGTGTTGAAGGAATGC+AGG | + | chr3.2:25754225-25754244 | MS.gene63562:CDS | 50.0% |
! | CATTGGTAGTAGGTCGGAAC+TGG | + | chr3.2:25752040-25752059 | MS.gene63562:CDS | 50.0% |
! | GCAAGCCATTGGTAGTAGGT+CGG | + | chr3.2:25752034-25752053 | MS.gene63562:CDS | 50.0% |
! | GTACTCTTTTGTCGGGAGCA+TGG | + | chr3.2:25751368-25751387 | MS.gene63562:CDS | 50.0% |
! | TCTTGTCGCTTGCTTCGACA+AGG | + | chr3.2:25753329-25753348 | MS.gene63562:CDS | 50.0% |
! | TTGCTCCTTTTCGAAGGAGG+GGG | - | chr3.2:25751528-25751547 | None:intergenic | 50.0% |
! | TTTGAAGTACGGGCAAGAGC+CGG | - | chr3.2:25751882-25751901 | None:intergenic | 50.0% |
!! | GGTGATGGAGCTAATGACGT+GGG | + | chr3.2:25754169-25754188 | MS.gene63562:CDS | 50.0% |
!! | GTCGGGAGCATGGATTTTGA+AGG | + | chr3.2:25751378-25751397 | MS.gene63562:CDS | 50.0% |
AAAGACCCCAAGGGCAATGG+CGG | - | chr3.2:25754947-25754966 | None:intergenic | 55.0% | |
ATCACTAGCCATGACGGCCT+AGG | - | chr3.2:25754355-25754374 | None:intergenic | 55.0% | |
ATCGCCAAAGCAGAAGGCTC+TGG | + | chr3.2:25753771-25753790 | MS.gene63562:CDS | 55.0% | |
CCTGTTTCCTCGTCCACTTC+CGG | - | chr3.2:25752224-25752243 | None:intergenic | 55.0% | |
CGACACTGACACGACAACAC+CGG | + | chr3.2:25755084-25755103 | MS.gene63562:intron | 55.0% | |
CGCTGTGCGATACTTCACCT+TGG | + | chr3.2:25755917-25755936 | MS.gene63562:CDS | 55.0% | |
GACGAGAACGGAAAAACCGC+TGG | + | chr3.2:25755828-25755847 | MS.gene63562:CDS | 55.0% | |
GCTCAACCTCTGTGACACCA+CGG | - | chr3.2:25752016-25752035 | None:intergenic | 55.0% | |
GTATCGAACACTGCCGGTGT+CGG | + | chr3.2:25755164-25755183 | MS.gene63562:intron | 55.0% | |
GTCAAAGACCCCAAGGGCAA+TGG | - | chr3.2:25754950-25754969 | None:intergenic | 55.0% | |
TCACTAGCCATGACGGCCTA+GGG | - | chr3.2:25754354-25754373 | None:intergenic | 55.0% | |
TCATACTGCCATGCCGGAAG+TGG | + | chr3.2:25752208-25752227 | MS.gene63562:CDS | 55.0% | |
TCGCTCATCGCCAAAGCAGA+AGG | + | chr3.2:25753765-25753784 | MS.gene63562:CDS | 55.0% | |
TCGGTTGCTGGGGTAGCTTA+TGG | + | chr3.2:25751990-25752009 | MS.gene63562:CDS | 55.0% | |
TCTCGGAGAAGAAGCTGCTG+AGG | - | chr3.2:25751423-25751442 | None:intergenic | 55.0% | |
! | GATGCTGCGGCGACTCTTTT+AGG | - | chr3.2:25751717-25751736 | None:intergenic | 55.0% |
! | GGTGGCGCCGAATTCTAAGT+TGG | + | chr3.2:25755733-25755752 | MS.gene63562:CDS | 55.0% |
!! | CGGTGATGGAGCTAATGACG+TGG | + | chr3.2:25754168-25754187 | MS.gene63562:CDS | 55.0% |
!! | GGATCCGGTTTCTGGCAATG+AGG | + | chr3.2:25752358-25752377 | MS.gene63562:CDS | 55.0% |
!! | GTGCTGACTCAGCACAGTTC+AGG | - | chr3.2:25750649-25750668 | None:intergenic | 55.0% |
!! | TGCTCTGTAAAGGCGCTGAC+AGG | + | chr3.2:25752654-25752673 | MS.gene63562:CDS | 55.0% |
!! | TTATGGCCGTGGTGTCACAG+AGG | + | chr3.2:25752007-25752026 | MS.gene63562:CDS | 55.0% |
AAGACCCCAAGGGCAATGGC+GGG | - | chr3.2:25754946-25754965 | None:intergenic | 60.0% | |
CCACTCCCCCTCCTTCGAAA+AGG | + | chr3.2:25751520-25751539 | MS.gene63562:CDS | 60.0% | |
CCGGAAGTGGACGAGGAAAC+AGG | + | chr3.2:25752221-25752240 | MS.gene63562:CDS | 60.0% | |
TTCCTCGTCCACTTCCGGCA+TGG | - | chr3.2:25752219-25752238 | None:intergenic | 60.0% | |
! | CCTTTTCGAAGGAGGGGGAG+TGG | - | chr3.2:25751523-25751542 | None:intergenic | 60.0% |
! | CTACAGCAGTGGCACCGAGA+AGG | - | chr3.2:25753007-25753026 | None:intergenic | 60.0% |
CGCTTCCCGCCATTGCCCTT+GGG | + | chr3.2:25754938-25754957 | MS.gene63562:CDS | 65.0% | |
CTAGCCATGACGGCCTAGGG+AGG | - | chr3.2:25754351-25754370 | None:intergenic | 65.0% | |
CTCTCCTCCCTAGGCCGTCA+TGG | + | chr3.2:25754344-25754363 | MS.gene63562:intron | 65.0% | |
GCACAGCGAGCGCCATCTGT+AGG | - | chr3.2:25755905-25755924 | None:intergenic | 65.0% | |
GCTGGGGTAGCTTATGGCCG+TGG | + | chr3.2:25751996-25752015 | MS.gene63562:CDS | 65.0% | |
GCTTCCCGCCATTGCCCTTG+GGG | + | chr3.2:25754939-25754958 | MS.gene63562:CDS | 65.0% | |
TCGCTTCCCGCCATTGCCCT+TGG | + | chr3.2:25754937-25754956 | MS.gene63562:CDS | 65.0% | |
TGACGGCCTAGGGAGGAGAG+AGG | - | chr3.2:25754344-25754363 | None:intergenic | 65.0% | |
TGCCATGCCGGAAGTGGACG+AGG | + | chr3.2:25752214-25752233 | MS.gene63562:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 25749821 | 25756217 | 25749821 | ID=MS.gene63562 |
chr3.2 | mRNA | 25749821 | 25756217 | 25749821 | ID=MS.gene63562.t1;Parent=MS.gene63562 |
chr3.2 | exon | 25749821 | 25750210 | 25749821 | ID=MS.gene63562.t1.exon1;Parent=MS.gene63562.t1 |
chr3.2 | CDS | 25749821 | 25750210 | 25749821 | ID=cds.MS.gene63562.t1;Parent=MS.gene63562.t1 |
chr3.2 | exon | 25751060 | 25752387 | 25751060 | ID=MS.gene63562.t1.exon2;Parent=MS.gene63562.t1 |
chr3.2 | CDS | 25751060 | 25752387 | 25751060 | ID=cds.MS.gene63562.t1;Parent=MS.gene63562.t1 |
chr3.2 | exon | 25752565 | 25752675 | 25752565 | ID=MS.gene63562.t1.exon3;Parent=MS.gene63562.t1 |
chr3.2 | CDS | 25752565 | 25752675 | 25752565 | ID=cds.MS.gene63562.t1;Parent=MS.gene63562.t1 |
chr3.2 | exon | 25752770 | 25753046 | 25752770 | ID=MS.gene63562.t1.exon4;Parent=MS.gene63562.t1 |
chr3.2 | CDS | 25752770 | 25753046 | 25752770 | ID=cds.MS.gene63562.t1;Parent=MS.gene63562.t1 |
chr3.2 | exon | 25753140 | 25753228 | 25753140 | ID=MS.gene63562.t1.exon5;Parent=MS.gene63562.t1 |
chr3.2 | CDS | 25753140 | 25753228 | 25753140 | ID=cds.MS.gene63562.t1;Parent=MS.gene63562.t1 |
chr3.2 | exon | 25753325 | 25753436 | 25753325 | ID=MS.gene63562.t1.exon6;Parent=MS.gene63562.t1 |
chr3.2 | CDS | 25753325 | 25753436 | 25753325 | ID=cds.MS.gene63562.t1;Parent=MS.gene63562.t1 |
chr3.2 | exon | 25753580 | 25753792 | 25753580 | ID=MS.gene63562.t1.exon7;Parent=MS.gene63562.t1 |
chr3.2 | CDS | 25753580 | 25753792 | 25753580 | ID=cds.MS.gene63562.t1;Parent=MS.gene63562.t1 |
chr3.2 | exon | 25754121 | 25754246 | 25754121 | ID=MS.gene63562.t1.exon8;Parent=MS.gene63562.t1 |
chr3.2 | CDS | 25754121 | 25754246 | 25754121 | ID=cds.MS.gene63562.t1;Parent=MS.gene63562.t1 |
chr3.2 | exon | 25754357 | 25754455 | 25754357 | ID=MS.gene63562.t1.exon9;Parent=MS.gene63562.t1 |
chr3.2 | CDS | 25754357 | 25754455 | 25754357 | ID=cds.MS.gene63562.t1;Parent=MS.gene63562.t1 |
chr3.2 | exon | 25754808 | 25754999 | 25754808 | ID=MS.gene63562.t1.exon10;Parent=MS.gene63562.t1 |
chr3.2 | CDS | 25754808 | 25754999 | 25754808 | ID=cds.MS.gene63562.t1;Parent=MS.gene63562.t1 |
chr3.2 | exon | 25755690 | 25756217 | 25755690 | ID=MS.gene63562.t1.exon11;Parent=MS.gene63562.t1 |
chr3.2 | CDS | 25755690 | 25756217 | 25755690 | ID=cds.MS.gene63562.t1;Parent=MS.gene63562.t1 |
Gene Sequence |
Protein sequence |