AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054576


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054576.t1 MTR_4g008140 98.094 577 11 0 1 577 1 577 0.0 1174
MS.gene054576.t1 MTR_4g127310 68.557 582 174 2 1 575 1 580 0.0 820
MS.gene054576.t1 MTR_2g019520 42.004 519 237 16 87 546 114 627 2.26e-111 346
MS.gene054576.t1 MTR_1g076280 32.244 459 265 12 107 544 46 479 1.30e-55 197
MS.gene054576.t1 MTR_1g076280 32.244 459 265 12 107 544 46 479 4.37e-55 197
MS.gene054576.t1 MTR_4g106370 30.213 470 269 11 110 548 39 480 2.24e-49 180
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054576.t1 AT1G51590 78.986 552 104 5 1 551 1 541 0.0 881
MS.gene054576.t1 AT3G21160 75.260 578 130 4 1 575 1 568 0.0 874
MS.gene054576.t1 AT1G51590 85.812 437 61 1 116 551 1 437 0.0 792
MS.gene054576.t1 AT3G21160 72.115 416 105 3 1 415 1 406 0.0 598
MS.gene054576.t1 AT1G30000 43.145 496 222 15 108 546 128 620 1.52e-113 352
MS.gene054576.t1 AT1G30000 43.145 496 222 15 108 546 148 640 2.14e-113 352
MS.gene054576.t1 AT5G43710 31.602 462 267 9 107 546 39 473 7.53e-55 195
MS.gene054576.t1 AT5G43710 31.373 459 272 8 107 546 39 473 8.39e-55 195
MS.gene054576.t1 AT5G43710 31.398 465 270 9 107 549 39 476 1.80e-54 195
MS.gene054576.t1 AT1G27520 30.426 470 274 9 107 548 36 480 2.53e-53 191

Find 138 sgRNAs with CRISPR-Local

Find 457 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAGTACATACGATCTTTC+AGG 0.182763 4.1:-87373106 MS.gene054576:CDS
TCTTGATACACTATACATTA+TGG 0.190941 4.1:-87373835 MS.gene054576:CDS
AATAACCGACTTGCATAATT+TGG 0.194478 4.1:-87374704 MS.gene054576:intron
GAGAACTATTTCTTTCATTC+TGG 0.205349 4.1:-87370209 MS.gene054576:CDS
TGCTCCAGGGATGCTTGCTT+TGG 0.216455 4.1:-87370784 MS.gene054576:CDS
ATGAATACTTGCTTAAAGTT+TGG 0.236436 4.1:-87371324 MS.gene054576:CDS
TCCTTTCTGCCACCTATTCT+AGG 0.259317 4.1:+87369486 None:intergenic
AAAACCTTCTGCTGATACTT+TGG 0.271291 4.1:+87371721 None:intergenic
TTTCAAGGGTGAGAGTATTT+TGG 0.274453 4.1:-87371800 MS.gene054576:intron
GCTTTGGGATCATCTGGTTA+TGG 0.305745 4.1:-87370768 MS.gene054576:CDS
CTCTAGCTGTAAAACTTTAT+AGG 0.313818 4.1:-87371285 MS.gene054576:intron
TGAATACTTGCTTAAAGTTT+GGG 0.318324 4.1:-87371323 MS.gene054576:CDS
GACAAGTTGATAATGTTATA+AGG 0.323001 4.1:+87373007 None:intergenic
GTCAATAGCTTTGGAGGTCT+TGG 0.324765 4.1:-87373876 MS.gene054576:CDS
TTCTCATTTGAGTTCTTAAC+AGG 0.325798 4.1:+87369522 None:intergenic
TGAGTAGTGGTAGCAGTAAA+TGG 0.338172 4.1:-87376155 MS.gene054576:CDS
GCTCCAGGGATGCTTGCTTT+GGG 0.341072 4.1:-87370783 MS.gene054576:CDS
TCCCTTCGAGTCAACCTTCC+CGG 0.344813 4.1:+87374286 None:intergenic
CTTGATACACTATACATTAT+GGG 0.345860 4.1:-87373834 MS.gene054576:CDS
ATCTTGGTATGTCTTGTTGC+CGG 0.354146 4.1:+87369999 None:intergenic
AAACCTTCTGCTGATACTTT+GGG 0.354260 4.1:+87371722 None:intergenic
TTGAATACCCATTCATCTAA+TGG 0.357605 4.1:+87369591 None:intergenic
ATGCTTGCTTTGGGATCATC+TGG 0.372484 4.1:-87370774 MS.gene054576:CDS
CGCATAGAGTCGGGCTATGT+TGG 0.374873 4.1:-87369937 MS.gene054576:CDS
AGAACTATTTCTTTCATTCT+GGG 0.375064 4.1:-87370208 MS.gene054576:CDS
TTCCCTTCTCTGGATATCAA+TGG 0.381049 4.1:+87374226 None:intergenic
CGGTCATTCCATTAGATGAA+TGG 0.381669 4.1:-87369599 MS.gene054576:CDS
TCCCTTCTCTGGATATCAAT+GGG 0.384629 4.1:+87374227 None:intergenic
TTGAGTCACTCTTCTACCTT+TGG 0.392975 4.1:-87370029 MS.gene054576:CDS
CAGGTCCACTAAAGAGGTCT+TGG 0.393953 4.1:-87374255 MS.gene054576:CDS
GACTTTATTTGCAGCTTGCT+TGG 0.396144 4.1:-87370277 MS.gene054576:intron
CATTTGGCGCCATGGGTGAT+AGG 0.398474 4.1:-87371497 MS.gene054576:intron
TCCTATCACATTTGGCGCCA+TGG 0.401558 4.1:-87371505 MS.gene054576:CDS
CAGCTGGGTCGCAAACTCTC+TGG 0.407952 4.1:-87373330 MS.gene054576:CDS
ATAGGAAGTAATCCATCATC+AGG 0.411882 4.1:+87371564 None:intergenic
GCAACAAGACATACCAAGAT+TGG 0.418963 4.1:-87369996 MS.gene054576:CDS
CTGCTGATACTTTGGGTCTC+CGG 0.423512 4.1:+87371729 None:intergenic
AATAAAACATTCCCTGATGA+TGG 0.424362 4.1:-87371576 MS.gene054576:CDS
TCACCACAATCCAGAGTAGT+AGG 0.425238 4.1:-87373136 MS.gene054576:intron
TTGCTTAAAGTTTGGGTACA+AGG 0.427453 4.1:-87371316 MS.gene054576:CDS
ACACAGAAGCACACCCTTTG+AGG 0.428655 4.1:-87369569 MS.gene054576:CDS
AAAAGTGGTGTCAATAGCTT+TGG 0.429770 4.1:-87373885 MS.gene054576:CDS
TTCTACCTTTGGCGCCTAAC+CGG 0.433958 4.1:-87370018 MS.gene054576:CDS
GGCTACTCTCCTATCACATT+TGG 0.436591 4.1:-87371513 MS.gene054576:CDS
ACCATACCTGTAGTTCATCT+TGG 0.442790 4.1:+87374147 None:intergenic
GAACTAGCGTGCTTTGCTCC+AGG 0.446640 4.1:-87370798 MS.gene054576:CDS
ATTATCCAAGACCTCTTTAG+TGG 0.450428 4.1:+87374250 None:intergenic
CAACAAGACATACCAAGATT+GGG 0.450877 4.1:-87369995 MS.gene054576:CDS
GTTTATGTCACTTGCGGAAG+AGG 0.455285 4.1:-87370727 MS.gene054576:intron
ATATATTCCAACCCCAATCT+TGG 0.459533 4.1:+87369983 None:intergenic
AAGAGTGACTCAACTGTCTC+TGG 0.462962 4.1:+87370039 None:intergenic
GGTCATTCCATTAGATGAAT+GGG 0.464425 4.1:-87369598 MS.gene054576:CDS
AATCCTCATAGTGGAACAAC+AGG 0.466061 4.1:-87371534 MS.gene054576:CDS
TAATCTATCTGCAATATCTC+TGG 0.470494 4.1:+87373060 None:intergenic
AAGGTCTGTTAAGTTTGATT+CGG 0.471042 4.1:-87370990 MS.gene054576:CDS
GATCCCAAAGCAAGCATCCC+TGG 0.472500 4.1:+87370780 None:intergenic
CAAGGACGTGCACACAATCC+TGG 0.473872 4.1:-87372983 MS.gene054576:CDS
GCACACAATCCTGGATGGAC+CGG 0.474244 4.1:-87372974 MS.gene054576:CDS
GGTATGTCTTGTTGCCGGTT+AGG 0.474868 4.1:+87370004 None:intergenic
ACTCAACTGTCTCTGGCCTC+AGG 0.476268 4.1:+87370046 None:intergenic
GGCAGAAAGGAAGGTCGGTC+GGG 0.477322 4.1:-87369474 MS.gene054576:CDS
AAAGTGCATGATGGCACTGC+CGG 0.479791 4.1:-87374305 MS.gene054576:CDS
TAGCCTGTTGTTCCACTATG+AGG 0.480434 4.1:+87371531 None:intergenic
CCTATCACATTTGGCGCCAT+GGG 0.481889 4.1:-87371504 MS.gene054576:CDS
GGACGCTTCAAGTAATAAGC+TGG 0.482423 4.1:+87376120 None:intergenic
ATCTATATCAATCCTCATAG+TGG 0.483288 4.1:-87371543 MS.gene054576:CDS
AGTGGTGTCAATAGCTTTGG+AGG 0.491088 4.1:-87373882 MS.gene054576:CDS
ATAAACTTCTGCGAATCATC+AGG 0.492014 4.1:+87370744 None:intergenic
CTATGAGGATTGATATAGAT+AGG 0.493737 4.1:+87371546 None:intergenic
CCCATGGCGCCAAATGTGAT+AGG 0.494378 4.1:+87371504 None:intergenic
TCAACTCCAACAAAATTAGC+TGG 0.498371 4.1:-87370233 MS.gene054576:CDS
CAGATAGATTACTGCCTGCA+TGG 0.503951 4.1:-87373048 MS.gene054576:CDS
CCTGCATGGAACACACCTAC+AGG 0.506080 4.1:-87373034 MS.gene054576:CDS
CATATATAAGTAAAGGAAGA+TGG 0.506462 4.1:+87370958 None:intergenic
CCTGTAGGTGTGTTCCATGC+AGG 0.506768 4.1:+87373034 None:intergenic
AAGAAGCAATGCTTCATGCT+TGG 0.508050 4.1:-87374196 MS.gene054576:CDS
TTCTTACGAGAAATATGCGT+GGG 0.509050 4.1:-87374171 MS.gene054576:CDS
AAAAGCATAGCAAGACGCTT+AGG 0.510186 4.1:+87376099 None:intergenic
AAGAACTCTCGCATAGAGTC+GGG 0.510675 4.1:-87369946 MS.gene054576:CDS
GTCGGGCTATGTTGGACTAA+AGG 0.512086 4.1:-87369929 MS.gene054576:CDS
TCTAATGGAATGACCGAAGA+AGG 0.512329 4.1:+87369606 None:intergenic
AAAGATCGTATGTACTAAGA+AGG 0.512574 4.1:+87373110 None:intergenic
TCCTAGAATAGGTGGCAGAA+AGG 0.513208 4.1:-87369487 MS.gene054576:CDS
CACACAATCCTGGATGGACC+GGG 0.515187 4.1:-87372973 MS.gene054576:CDS
ATCTCTAAAACAGAGATATG+TGG 0.515657 4.1:-87371026 MS.gene054576:intron
CTTCTCACATATATAAGTAA+AGG 0.516300 4.1:+87370951 None:intergenic
TGCTTAAAGTTTGGGTACAA+GGG 0.520166 4.1:-87371315 MS.gene054576:CDS
TGGCAGAAAGGAAGGTCGGT+CGG 0.523530 4.1:-87369475 MS.gene054576:CDS
AACTAACAGGTCCACTAAAG+AGG 0.528572 4.1:-87374261 MS.gene054576:CDS
TCTCTAAAACAGAGATATGT+GGG 0.531080 4.1:-87371025 MS.gene054576:intron
TTCCTTGTCACAATCCTCAA+AGG 0.532807 4.1:+87369555 None:intergenic
AAACTTACCCCGGTCCATCC+AGG 0.536972 4.1:+87372965 None:intergenic
TGCCGGGAAGGTTGACTCGA+AGG 0.537750 4.1:-87374288 MS.gene054576:CDS
GAACTATTTCTTTCATTCTG+GGG 0.545923 4.1:-87370207 MS.gene054576:CDS
TCCTTGTCACAATCCTCAAA+GGG 0.549191 4.1:+87369556 None:intergenic
GGGAGTAGATCAGTGAGTAG+TGG 0.550997 4.1:-87376168 MS.gene054576:CDS
AAGTGCATGATGGCACTGCC+GGG 0.556936 4.1:-87374304 MS.gene054576:CDS
CTCACTTCCCAGGTTAACAC+TGG 0.559131 4.1:-87369699 MS.gene054576:intron
AACTAGCGTGCTTTGCTCCA+GGG 0.559285 4.1:-87370797 MS.gene054576:CDS
CTATTTCTTTCATTCTGGGG+AGG 0.561509 4.1:-87370204 MS.gene054576:intron
AACTTTAGTCAGAGAATACC+AGG 0.562310 4.1:-87376034 MS.gene054576:intron
AGAATAGGTGGCAGAAAGGA+AGG 0.566046 4.1:-87369483 MS.gene054576:CDS
AGACATACCAAGATTGGGGT+TGG 0.568978 4.1:-87369990 MS.gene054576:CDS
ACATGAGTGTGGGTACATCA+TGG 0.569922 4.1:-87370074 MS.gene054576:CDS
TCCCATTGATATCCAGAGAA+GGG 0.570283 4.1:-87374228 MS.gene054576:CDS
TGTTGCCGGTTAGGCGCCAA+AGG 0.570883 4.1:+87370013 None:intergenic
CAATATCTCTGGCTTTGTCA+AGG 0.571901 4.1:+87373071 None:intergenic
GAAGAACTCTCGCATAGAGT+CGG 0.574661 4.1:-87369947 MS.gene054576:CDS
GCCGGGAAGGTTGACTCGAA+GGG 0.576993 4.1:-87374287 MS.gene054576:CDS
GTGGGGCCAAGATGAACTAC+AGG 0.591162 4.1:-87374153 MS.gene054576:intron
ATCCCATTGATATCCAGAGA+AGG 0.596496 4.1:-87374229 MS.gene054576:CDS
ATTGCTCTATCTCAAAGGAC+CGG 0.598269 4.1:-87371748 MS.gene054576:CDS
TCTTACCAAATTATGCAAGT+CGG 0.598941 4.1:+87374699 None:intergenic
ATCTTTCGAAAATGGCGAGA+GGG 0.599552 4.1:-87376188 None:intergenic
AGTTCATTGCTCTATCTCAA+AGG 0.605447 4.1:-87371753 MS.gene054576:CDS
GCAGAAGTTTATGTCACTTG+CGG 0.606147 4.1:-87370733 MS.gene054576:CDS
ATGTTATAAGGAATTCCTGT+AGG 0.608699 4.1:+87373019 None:intergenic
ACTTATATATGTGAGAAGAG+TGG 0.613725 4.1:-87370946 MS.gene054576:CDS
GACGTGCACACAATCCTGGA+TGG 0.617017 4.1:-87372979 MS.gene054576:CDS
ATGTGGGAGAAATCAATGAA+AGG 0.620443 4.1:-87371009 MS.gene054576:CDS
AACATTATCAACTTGTCACA+AGG 0.621612 4.1:-87373001 MS.gene054576:CDS
GCATGATGGCACTGCCGGGA+AGG 0.623896 4.1:-87374300 MS.gene054576:CDS
GAGTCAAATAAAGTGCATGA+TGG 0.624057 4.1:-87374314 MS.gene054576:CDS
AGACCCAAAGTATCAGCAGA+AGG 0.635744 4.1:-87371725 MS.gene054576:intron
ACCCTTTGAGGATTGTGACA+AGG 0.641871 4.1:-87369557 MS.gene054576:CDS
TAGGAAGTAATCCATCATCA+GGG 0.641994 4.1:+87371565 None:intergenic
GATGCAAAGTTTCTTTCTCG+CGG 0.643973 4.1:-87369661 MS.gene054576:CDS
GTGTTAATACCTATCACCCA+TGG 0.646060 4.1:+87371488 None:intergenic
TAGGTGGCAGAAAGGAAGGT+CGG 0.649075 4.1:-87369479 MS.gene054576:CDS
AACAAGACATACCAAGATTG+GGG 0.651954 4.1:-87369994 MS.gene054576:CDS
TATATATGTGAGAAGAGTGG+AGG 0.655638 4.1:-87370943 MS.gene054576:CDS
GATCTTTCGAAAATGGCGAG+AGG 0.677971 4.1:-87376189 None:intergenic
GATTGTGACAAGGAACGAAG+CGG 0.686601 4.1:-87369547 MS.gene054576:CDS
ACACAATCCTGGATGGACCG+GGG 0.694750 4.1:-87372972 MS.gene054576:intron
CCACAATCCAGAGTAGTAGG+TGG 0.698751 4.1:-87373133 MS.gene054576:intron
GTTCTTACGAGAAATATGCG+TGG 0.702505 4.1:-87374172 MS.gene054576:CDS
TCTTACGAGAAATATGCGTG+GGG 0.740661 4.1:-87374170 MS.gene054576:CDS
GTACATCATGGAACATCCTG+AGG 0.744218 4.1:-87370062 MS.gene054576:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAGAATAAAAGTTAAAAT+TGG + chr4.1:87373747-87373766 None:intergenic 10.0%
!! TATAAAAAAGAACATTAAAA+CGG + chr4.1:87370322-87370341 None:intergenic 10.0%
!!! ATATATTCATTTTTTTTTAC+GGG - chr4.1:87373962-87373981 MS.gene054576:intron 10.0%
!!! ATTTTTTATTATTTTTCCTT+TGG - chr4.1:87371278-87371297 MS.gene054576:intron 10.0%
!!! CATATATTCATTTTTTTTTA+CGG - chr4.1:87373961-87373980 MS.gene054576:intron 10.0%
!!! GAAATTATTTTTGATTTTTT+TGG - chr4.1:87370836-87370855 MS.gene054576:intron 10.0%
!!! GTTTATTATACTTTTTTAAT+TGG + chr4.1:87372428-87372447 None:intergenic 10.0%
!!! TTTTTTATTATTTTTCCTTT+GGG - chr4.1:87371279-87371298 MS.gene054576:intron 10.0%
!! AATAAATAACAATGAAAAGA+AGG - chr4.1:87371056-87371075 MS.gene054576:intron 15.0%
!! CGTAAAAAAAAATGAATATA+TGG + chr4.1:87373963-87373982 None:intergenic 15.0%
!!! ATTATACTTTTTTAATTGGA+AGG + chr4.1:87372424-87372443 None:intergenic 15.0%
!!! GTTGTTTCTAATATTATATT+TGG - chr4.1:87371957-87371976 MS.gene054576:intron 15.0%
!!! TAACTGTTTTTATTAAATAC+AGG - chr4.1:87370895-87370914 MS.gene054576:intron 15.0%
!!! TAATGTAACTTTTATGAATT+AGG + chr4.1:87372195-87372214 None:intergenic 15.0%
!!! TATATTCATTTTTTTTTACG+GGG - chr4.1:87373963-87373982 MS.gene054576:intron 15.0%
!!! TTATACTTTTTTAATTGGAA+GGG + chr4.1:87372423-87372442 None:intergenic 15.0%
!!! TTCTTTTCATTGTTATTTAT+TGG + chr4.1:87371057-87371076 None:intergenic 15.0%
!!! TTTTAGAGATTAAAAAGAAA+TGG + chr4.1:87374611-87374630 None:intergenic 15.0%
!!! TTTTTATTATTTTTCCTTTG+GGG - chr4.1:87371280-87371299 MS.gene054576:intron 15.0%
!! AAAAGATAATCATGAAAACA+TGG + chr4.1:87373112-87373131 None:intergenic 20.0%
!! AAATTGTTTCCATTTATAAG+CGG - chr4.1:87375140-87375159 MS.gene054576:intron 20.0%
!! AATATTTACCATTGATGTAT+TGG - chr4.1:87374781-87374800 MS.gene054576:intron 20.0%
!! ATTGGAAAAATGAAATGATA+TGG + chr4.1:87371039-87371058 None:intergenic 20.0%
!! CATTATTAAATGTGAAATTG+AGG + chr4.1:87375755-87375774 None:intergenic 20.0%
!! CTTGTACAATAGATTAAAAA+TGG + chr4.1:87370634-87370653 None:intergenic 20.0%
!! TAATAAAAACAGTTATCTAC+TGG + chr4.1:87370890-87370909 None:intergenic 20.0%
!! TAGTAATATCAAATCAGTAT+AGG + chr4.1:87369926-87369945 None:intergenic 20.0%
!! TATAATAAACTTAACTTACG+TGG - chr4.1:87372438-87372457 MS.gene054576:intron 20.0%
!! TCAATGGTAAATATTAAATG+CGG + chr4.1:87374776-87374795 None:intergenic 20.0%
!! TCTAATATTATATTTGGCAA+AGG - chr4.1:87371963-87371982 MS.gene054576:intron 20.0%
!! TTTATTCTCTGATATACTAT+CGG - chr4.1:87369787-87369806 MS.gene054576:intron 20.0%
!!! AAATTTACTTCTGCATTTTA+AGG - chr4.1:87375550-87375569 MS.gene054576:intron 20.0%
!!! AAGTGTAACTTTATTTTTAG+AGG - chr4.1:87370807-87370826 MS.gene054576:CDS 20.0%
!!! AATGATATGGAATGTTTTTA+AGG + chr4.1:87371026-87371045 None:intergenic 20.0%
!!! AGTACTATATTTTGTTCAAA+AGG + chr4.1:87372919-87372938 None:intergenic 20.0%
!!! AGTGTAACTTTATTTTTAGA+GGG - chr4.1:87370808-87370827 MS.gene054576:intron 20.0%
!!! ATACTGATTTGATATTACTA+AGG - chr4.1:87369926-87369945 MS.gene054576:intron 20.0%
!!! CAATAAAACAAAAAAGTACA+AGG + chr4.1:87371549-87371568 None:intergenic 20.0%
!!! TTACTTTTTCTTTTTTTGAC+AGG - chr4.1:87375470-87375489 MS.gene054576:intron 20.0%
!!! TTATCTTTTGCTATAGAAAT+AGG + chr4.1:87375111-87375130 None:intergenic 20.0%
!!! TTGAATGTGTTTTTAATAGA+AGG - chr4.1:87372976-87372995 MS.gene054576:CDS 20.0%
!!! TTTTATTATTTTTCCTTTGG+GGG - chr4.1:87371281-87371300 MS.gene054576:intron 20.0%
!!! TTTTCAAATAAACGTAGAAT+AGG - chr4.1:87374537-87374556 MS.gene054576:intron 20.0%
!!! TTTTTGTTTTTATTGACTAC+TGG + chr4.1:87373022-87373041 None:intergenic 20.0%
! AAACTTTGTAGCATATATTG+TGG - chr4.1:87370751-87370770 MS.gene054576:CDS 25.0%
! AAATACATGTAGAGTAAGTT+TGG + chr4.1:87375302-87375321 None:intergenic 25.0%
! AAATGTAATAAAGCCTAACT+AGG + chr4.1:87372271-87372290 None:intergenic 25.0%
! AACCTTATAAAGTAACCTTA+TGG + chr4.1:87372382-87372401 None:intergenic 25.0%
! AACTTTGTAGCATATATTGT+GGG - chr4.1:87370752-87370771 MS.gene054576:CDS 25.0%
! ATAATTCTTTCATTGATCCA+AGG + chr4.1:87374469-87374488 None:intergenic 25.0%
! ATCATATAGGATTTGTAAGA+AGG - chr4.1:87369851-87369870 MS.gene054576:intron 25.0%
! ATGAATACTTGCTTAAAGTT+TGG - chr4.1:87374323-87374342 MS.gene054576:CDS 25.0%
! ATGATTCTAAATGAGTATAG+AGG + chr4.1:87371928-87371947 None:intergenic 25.0%
! ATTGATATTGTTCTGTGATA+AGG - chr4.1:87370090-87370109 MS.gene054576:intron 25.0%
! CATATATAAGTAAAGGAAGA+TGG + chr4.1:87374692-87374711 None:intergenic 25.0%
! CATCTTATTCTGTGTTAATT+TGG - chr4.1:87374267-87374286 MS.gene054576:CDS 25.0%
! CATTTCCATATTTGTATTAG+AGG - chr4.1:87373251-87373270 MS.gene054576:intron 25.0%
! CTTCTCACATATATAAGTAA+AGG + chr4.1:87374699-87374718 None:intergenic 25.0%
! CTTGATACACTATACATTAT+GGG - chr4.1:87371813-87371832 MS.gene054576:intron 25.0%
! GAATGGTACATGATATAAAT+TGG - chr4.1:87371645-87371664 MS.gene054576:intron 25.0%
! GATGCACATAGTATTAATTT+GGG + chr4.1:87375895-87375914 None:intergenic 25.0%
! GTAGTTATAGAATACTACAA+CGG - chr4.1:87370708-87370727 MS.gene054576:intron 25.0%
! GTATTCATAAAAACTGCAAT+TGG + chr4.1:87374311-87374330 None:intergenic 25.0%
! GTATTCTATAACTACCAATT+TGG + chr4.1:87370703-87370722 None:intergenic 25.0%
! GTCAAAAAACAAAACTTGTA+TGG - chr4.1:87372111-87372130 MS.gene054576:intron 25.0%
! TCTTGATACACTATACATTA+TGG - chr4.1:87371812-87371831 MS.gene054576:intron 25.0%
! TGAATACTTGCTTAAAGTTT+GGG - chr4.1:87374324-87374343 MS.gene054576:intron 25.0%
! TGATGCACATAGTATTAATT+TGG + chr4.1:87375896-87375915 None:intergenic 25.0%
! TGTATAAAACATGATGAAGT+AGG + chr4.1:87374404-87374423 None:intergenic 25.0%
! TTACATTCAATTATTACCGA+TGG + chr4.1:87370410-87370429 None:intergenic 25.0%
! TTATGAAAACCGCTTATAAA+TGG + chr4.1:87375152-87375171 None:intergenic 25.0%
! TTGTAGTTAACTTAACATTG+AGG + chr4.1:87372780-87372799 None:intergenic 25.0%
! TTTATTGCATGATGATCTAA+TGG - chr4.1:87371562-87371581 MS.gene054576:CDS 25.0%
! TTTGATATTACTAAGGAGTA+AGG - chr4.1:87369933-87369952 MS.gene054576:CDS 25.0%
!! AACCATAAGGTTACTTTATA+AGG - chr4.1:87372377-87372396 MS.gene054576:intron 25.0%
!! AGAACTATTTCTTTCATTCT+GGG - chr4.1:87375439-87375458 MS.gene054576:intron 25.0%
!! AGGTTTATGATTTTTCACTT+GGG - chr4.1:87370002-87370021 MS.gene054576:CDS 25.0%
!! ATCTAGAACAGCAATAAAAT+TGG + chr4.1:87372048-87372067 None:intergenic 25.0%
!! CAAAAATCTTTTCCTAGAAT+AGG - chr4.1:87376149-87376168 MS.gene054576:CDS 25.0%
!! TAATATAGCAGTGATACTTT+TGG - chr4.1:87370536-87370555 MS.gene054576:intron 25.0%
!! TAGGTTTATGATTTTTCACT+TGG - chr4.1:87370001-87370020 MS.gene054576:CDS 25.0%
!! TTAAGTTGTTTATCCAAACA+TGG + chr4.1:87375032-87375051 None:intergenic 25.0%
!! TTCGGTTTCTTTTATTGTTT+GGG - chr4.1:87369583-87369602 MS.gene054576:CDS 25.0%
!! TTTCATGATTATCTTTTGCT+TGG - chr4.1:87373115-87373134 MS.gene054576:CDS 25.0%
!! TTTCGGTTTCTTTTATTGTT+TGG - chr4.1:87369582-87369601 MS.gene054576:CDS 25.0%
!!! ACAAGTTTTGTTTTTTGACA+AGG + chr4.1:87372110-87372129 None:intergenic 25.0%
!!! GACAAGTTGATAATGTTATA+AGG + chr4.1:87372643-87372662 None:intergenic 25.0%
!!! GTTATAGTGTTTAACTTGTA+TGG - chr4.1:87372080-87372099 MS.gene054576:intron 25.0%
!!! TTTTGTTTCAATTCTGTGTT+TGG - chr4.1:87369670-87369689 MS.gene054576:CDS 25.0%
!!! TTTTTCTTTTTTTGACAGGA+AGG - chr4.1:87375474-87375493 MS.gene054576:intron 25.0%
!!! TTTTTGCCTTCATTTTTCAA+GGG - chr4.1:87373833-87373852 MS.gene054576:CDS 25.0%
AAACTAAGAGCTAATCCAAA+TGG + chr4.1:87369960-87369979 None:intergenic 30.0%
AAAGATCGTATGTACTAAGA+AGG + chr4.1:87372540-87372559 None:intergenic 30.0%
AACATTATCAACTTGTCACA+AGG - chr4.1:87372646-87372665 MS.gene054576:intron 30.0%
AAGGTCTGTTAAGTTTGATT+CGG - chr4.1:87374657-87374676 MS.gene054576:intron 30.0%
AATAAAACATTCCCTGATGA+TGG - chr4.1:87374071-87374090 MS.gene054576:intron 30.0%
AATGAAAAGAAGGAATGAGA+TGG - chr4.1:87371066-87371085 MS.gene054576:intron 30.0%
ACTGATTGTATGTTCTTGAA+TGG - chr4.1:87371628-87371647 MS.gene054576:intron 30.0%
ACTTAATTGAACTAATCGAC+TGG + chr4.1:87375275-87375294 None:intergenic 30.0%
ACTTATATATGTGAGAAGAG+TGG - chr4.1:87374701-87374720 MS.gene054576:intron 30.0%
ACTTTCATCCAATACATCAA+TGG + chr4.1:87374792-87374811 None:intergenic 30.0%
AGACATGAAAAAACAATGCA+GGG - chr4.1:87373159-87373178 MS.gene054576:intron 30.0%
AGCAAAAAACAATAACAACC+AGG + chr4.1:87371901-87371920 None:intergenic 30.0%
ATAAAACATGATGAAGTAGG+TGG + chr4.1:87374401-87374420 None:intergenic 30.0%
ATAGGATTTGTAAGAAGGAA+AGG - chr4.1:87369856-87369875 MS.gene054576:intron 30.0%
ATATTGCTTTCATGTTCCAT+AGG - chr4.1:87372754-87372773 MS.gene054576:intron 30.0%
ATCTATATCAATCCTCATAG+TGG - chr4.1:87374104-87374123 MS.gene054576:intron 30.0%
ATGTTATAAGGAATTCCTGT+AGG + chr4.1:87372631-87372650 None:intergenic 30.0%
ATTCTAAATGAGTATAGAGG+TGG + chr4.1:87371925-87371944 None:intergenic 30.0%
CAAATGAAGAAATACATACC+TGG + chr4.1:87369634-87369653 None:intergenic 30.0%
CAATATACAAAAGCCATGTT+TGG - chr4.1:87375016-87375035 MS.gene054576:intron 30.0%
CTAGTGTTCATAGATCATAT+AGG - chr4.1:87369838-87369857 MS.gene054576:intron 30.0%
CTATGAGGATTGATATAGAT+AGG + chr4.1:87374104-87374123 None:intergenic 30.0%
CTCTAGCTGTAAAACTTTAT+AGG - chr4.1:87374362-87374381 MS.gene054576:intron 30.0%
CTTGAAAAATGAAGGCAAAA+AGG + chr4.1:87373834-87373853 None:intergenic 30.0%
CTTGAGAAGAGTTTATAAAG+AGG - chr4.1:87373419-87373438 MS.gene054576:intron 30.0%
GACACAAAAGTTGTAAACAA+TGG + chr4.1:87372804-87372823 None:intergenic 30.0%
GCAGCAATAAAGAGTTAAAT+AGG + chr4.1:87372165-87372184 None:intergenic 30.0%
GTATGACAACTTCATAAAGA+CGG + chr4.1:87375344-87375363 None:intergenic 30.0%
GTTAATCATGTCACGAAAAA+CGG + chr4.1:87373725-87373744 None:intergenic 30.0%
TAACTACCAATTTGGTTGTT+TGG + chr4.1:87370695-87370714 None:intergenic 30.0%
TAATCTATCTGCAATATCTC+TGG + chr4.1:87372590-87372609 None:intergenic 30.0%
TACAAGATAATGAGTAGTTG+TGG - chr4.1:87370648-87370667 MS.gene054576:intron 30.0%
TAGACATGAAAAAACAATGC+AGG - chr4.1:87373158-87373177 MS.gene054576:intron 30.0%
TCATTTGAATGATAGTTCCT+TGG - chr4.1:87374449-87374468 MS.gene054576:intron 30.0%
TCTTACCAAATTATGCAAGT+CGG + chr4.1:87370951-87370970 None:intergenic 30.0%
TGATCAATACTTAGCAAGAA+AGG + chr4.1:87373186-87373205 None:intergenic 30.0%
TTAATCATGTCACGAAAAAC+GGG + chr4.1:87373724-87373743 None:intergenic 30.0%
TTCTTTAGTTAGTACTGTCT+GGG - chr4.1:87374227-87374246 MS.gene054576:CDS 30.0%
TTGAATACCCATTCATCTAA+TGG + chr4.1:87376059-87376078 None:intergenic 30.0%
TTGATCTTAACCTTAAAGCT+TGG - chr4.1:87372855-87372874 MS.gene054576:intron 30.0%
TTGTTAAATAGAGGCTATGA+TGG - chr4.1:87370032-87370051 MS.gene054576:CDS 30.0%
! AAATCTTTTCCTAGAATAGG+TGG - chr4.1:87376152-87376171 MS.gene054576:CDS 30.0%
! CATGGCTTTTGTATATTGAT+AGG + chr4.1:87375014-87375033 None:intergenic 30.0%
! GAACTATTTCTTTCATTCTG+GGG - chr4.1:87375440-87375459 MS.gene054576:intron 30.0%
! GAGAACTATTTCTTTCATTC+TGG - chr4.1:87375438-87375457 MS.gene054576:intron 30.0%
! GCTTTTATCGTGTAAAAAGA+TGG + chr4.1:87374195-87374214 None:intergenic 30.0%
! GGTTTATGATTTTTCACTTG+GGG - chr4.1:87370003-87370022 MS.gene054576:CDS 30.0%
! TAATTTTGTGCCAGATTGAT+TGG + chr4.1:87371169-87371188 None:intergenic 30.0%
! TACAACTTTTGTGTCCATAA+AGG - chr4.1:87372809-87372828 MS.gene054576:intron 30.0%
! TGTTCTAGATGAACATTTCA+TGG - chr4.1:87372058-87372077 MS.gene054576:intron 30.0%
! TTCTCATTTGAGTTCTTAAC+AGG + chr4.1:87376128-87376147 None:intergenic 30.0%
! TTTTCAATCAGTACGAAAGT+AGG + chr4.1:87371123-87371142 None:intergenic 30.0%
!! AAACTCTCTGGATTTTAACA+AGG - chr4.1:87372329-87372348 MS.gene054576:intron 30.0%
!! AAGCTTTAAGGTTAAGATCA+AGG + chr4.1:87372856-87372875 None:intergenic 30.0%
!! AATAACCGACTTGCATAATT+TGG - chr4.1:87370943-87370962 MS.gene054576:CDS 30.0%
!! ATCTCTAAAACAGAGATATG+TGG - chr4.1:87374621-87374640 MS.gene054576:intron 30.0%
!! CTAACACAAAAGCATTTACA+TGG + chr4.1:87375081-87375100 None:intergenic 30.0%
!! CTAATTTTGTTGGAGTTGAT+TGG + chr4.1:87375413-87375432 None:intergenic 30.0%
!! CTTTTTGCCTTCATTTTTCA+AGG - chr4.1:87373832-87373851 MS.gene054576:CDS 30.0%
!! TCTCTAAAACAGAGATATGT+GGG - chr4.1:87374622-87374641 MS.gene054576:intron 30.0%
!! TGGATTAGCTCTTAGTTTAT+GGG - chr4.1:87369962-87369981 MS.gene054576:CDS 30.0%
!! TTGGATTAGCTCTTAGTTTA+TGG - chr4.1:87369961-87369980 MS.gene054576:CDS 30.0%
!! TTTTTGGCACTTGAATAACT+TGG - chr4.1:87370852-87370871 MS.gene054576:intron 30.0%
!!! AGACTTTTTTTTTGCCAAAG+TGG + chr4.1:87375831-87375850 None:intergenic 30.0%
!!! TCATTTTTTTTTACGGGGAA+GGG - chr4.1:87373968-87373987 MS.gene054576:intron 30.0%
!!! TTCATTTTTTTTTACGGGGA+AGG - chr4.1:87373967-87373986 MS.gene054576:intron 30.0%
!!! TTGTTTTTATTGACTACTGG+AGG + chr4.1:87373019-87373038 None:intergenic 30.0%
AAAACCTTCTGCTGATACTT+TGG + chr4.1:87373929-87373948 None:intergenic 35.0%
AAAAGGTTACACTTACTCTC+GGG + chr4.1:87371862-87371881 None:intergenic 35.0%
AAACCTTCTGCTGATACTTT+GGG + chr4.1:87373928-87373947 None:intergenic 35.0%
AACAAGACATACCAAGATTG+GGG - chr4.1:87375653-87375672 MS.gene054576:intron 35.0%
AACTTTAGTCAGAGAATACC+AGG - chr4.1:87369613-87369632 MS.gene054576:CDS 35.0%
AATACATTATCCTGACAGCT+GGG - chr4.1:87372302-87372321 MS.gene054576:intron 35.0%
AATGGAGTGATGTGGTTATT+TGG - chr4.1:87371580-87371599 MS.gene054576:CDS 35.0%
ACCTTAAAGCTTGGATATTG+TGG - chr4.1:87372864-87372883 MS.gene054576:intron 35.0%
AGAATCCTATCTATCTGATG+TGG + chr4.1:87373401-87373420 None:intergenic 35.0%
AGTTATTGCCTATGAAGCAT+TGG - chr4.1:87370341-87370360 MS.gene054576:intron 35.0%
AGTTCATTGCTCTATCTCAA+AGG - chr4.1:87373894-87373913 MS.gene054576:CDS 35.0%
ATAAACTTCTGCGAATCATC+AGG + chr4.1:87374906-87374925 None:intergenic 35.0%
ATAGGAAGTAATCCATCATC+AGG + chr4.1:87374086-87374105 None:intergenic 35.0%
ATATATTCCAACCCCAATCT+TGG + chr4.1:87375667-87375686 None:intergenic 35.0%
ATGATTCTGCATTGCAATAC+TGG - chr4.1:87374745-87374764 MS.gene054576:intron 35.0%
ATGTGGGAGAAATCAATGAA+AGG - chr4.1:87374638-87374657 MS.gene054576:intron 35.0%
ATTATCCAAGACCTCTTTAG+TGG + chr4.1:87371400-87371419 None:intergenic 35.0%
ATTCAAATAAGAACTCTGCC+CGG + chr4.1:87371241-87371260 None:intergenic 35.0%
ATTCTCAACCTGAAAAAGCA+GGG + chr4.1:87374036-87374055 None:intergenic 35.0%
CAACAAGACATACCAAGATT+GGG - chr4.1:87375652-87375671 MS.gene054576:intron 35.0%
CAATTGTGATACTCCTAGTT+AGG - chr4.1:87372255-87372274 MS.gene054576:intron 35.0%
CCATATTTGTATTAGAGGCA+TGG - chr4.1:87373256-87373275 MS.gene054576:intron 35.0%
CCATGCCTCTAATACAAATA+TGG + chr4.1:87373259-87373278 None:intergenic 35.0%
CGTAAATGCACAATTGAGTA+TGG - chr4.1:87370567-87370586 MS.gene054576:intron 35.0%
CTAACTCATCCTTACAAAAC+AGG + chr4.1:87373466-87373485 None:intergenic 35.0%
CTAACTCATCCTTACAAAAC+TGG + chr4.1:87373466-87373485 None:intergenic 35.0%
CTGCTTTCTAATGTTATTCG+TGG - chr4.1:87373215-87373234 MS.gene054576:intron 35.0%
CTTAGTACATACGATCTTTC+AGG - chr4.1:87372541-87372560 MS.gene054576:intron 35.0%
CTTCTTTAGTTAGTACTGTC+TGG - chr4.1:87374226-87374245 MS.gene054576:CDS 35.0%
GAAAAGGTTACACTTACTCT+CGG + chr4.1:87371863-87371882 None:intergenic 35.0%
GAATCCTATCTATCTGATGT+GGG + chr4.1:87373400-87373419 None:intergenic 35.0%
GAGAAGAGTTTATAAAGAGG+AGG - chr4.1:87373422-87373441 MS.gene054576:intron 35.0%
GAGTCAAATAAAGTGCATGA+TGG - chr4.1:87371333-87371352 MS.gene054576:intron 35.0%
GCAATTGGAATTGTTTCAGT+TGG - chr4.1:87371308-87371327 MS.gene054576:CDS 35.0%
GGAATCAGAAACTCATAAAG+CGG + chr4.1:87373813-87373832 None:intergenic 35.0%
GGGTGCTTCTTAGATAAAAT+AGG - chr4.1:87369982-87370001 MS.gene054576:CDS 35.0%
GGTCATTCCATTAGATGAAT+GGG - chr4.1:87376049-87376068 MS.gene054576:CDS 35.0%
GTTATAGAATACTACAACGG+CGG - chr4.1:87370711-87370730 MS.gene054576:intron 35.0%
TAAACACTTGTGAGATGGTT+TGG + chr4.1:87375250-87375269 None:intergenic 35.0%
TAACTTAACATTGAGGCCTA+TGG + chr4.1:87372773-87372792 None:intergenic 35.0%
TAATACATTATCCTGACAGC+TGG - chr4.1:87372301-87372320 MS.gene054576:intron 35.0%
TAATCATGTCACGAAAAACG+GGG + chr4.1:87373723-87373742 None:intergenic 35.0%
TACTCTCTTTGTCCCATATT+GGG - chr4.1:87375803-87375822 MS.gene054576:intron 35.0%
TAGGAAGTAATCCATCATCA+GGG + chr4.1:87374085-87374104 None:intergenic 35.0%
TATATATGTGAGAAGAGTGG+AGG - chr4.1:87374704-87374723 MS.gene054576:intron 35.0%
TCAACAGAACAAGCACATTA+AGG + chr4.1:87374971-87374990 None:intergenic 35.0%
TCAACTCCAACAAAATTAGC+TGG - chr4.1:87375414-87375433 MS.gene054576:intron 35.0%
TGATACCATGTCACGAAAAT+CGG + chr4.1:87373492-87373511 None:intergenic 35.0%
TGATATTGACATGTGACCAT+CGG - chr4.1:87370391-87370410 MS.gene054576:intron 35.0%
TGCTTAAAGTTTGGGTACAA+GGG - chr4.1:87374332-87374351 MS.gene054576:intron 35.0%
TTATAGAATACTACAACGGC+GGG - chr4.1:87370712-87370731 MS.gene054576:intron 35.0%
TTATCAACACCTCTGATCAA+AGG - chr4.1:87369707-87369726 MS.gene054576:intron 35.0%
TTCTTACGAGAAATATGCGT+GGG - chr4.1:87371476-87371495 MS.gene054576:intron 35.0%
TTGCTTAAAGTTTGGGTACA+AGG - chr4.1:87374331-87374350 MS.gene054576:intron 35.0%
TTTAACACCAGTGTTAACCT+GGG + chr4.1:87375958-87375977 None:intergenic 35.0%
! AAAAGTGGTGTCAATAGCTT+TGG - chr4.1:87371762-87371781 MS.gene054576:CDS 35.0%
! CTGTTTTGTAAGGATGAGTT+AGG - chr4.1:87373697-87373716 MS.gene054576:intron 35.0%
! GCACATTAAGGCTTTTCAAA+TGG + chr4.1:87374959-87374978 None:intergenic 35.0%
! GCGGTTTTCATAAACTATCA+CGG - chr4.1:87375159-87375178 MS.gene054576:intron 35.0%
! GCTTTTCATCGTTTTCGTTT+CGG - chr4.1:87369565-87369584 MS.gene054576:CDS 35.0%
! GGGATAGTGTTGTTAAATAG+AGG - chr4.1:87370023-87370042 MS.gene054576:CDS 35.0%
! TATAGCAGTGATACTTTTGG+AGG - chr4.1:87370539-87370558 MS.gene054576:intron 35.0%
! TTCTCTCCAGCTAATTTTGT+TGG + chr4.1:87375423-87375442 None:intergenic 35.0%
!! ACGAGAGTATGATTTGTTAG+CGG - chr4.1:87373352-87373371 MS.gene054576:intron 35.0%
!! AGGAAGTGTTCACTTGATAA+TGG + chr4.1:87371205-87371224 None:intergenic 35.0%
!! CAGTTTTGTAAGGATGAGTT+AGG - chr4.1:87373464-87373483 MS.gene054576:intron 35.0%
!! CATTTTAAGGACATGAGTGT+GGG - chr4.1:87375563-87375582 MS.gene054576:intron 35.0%
!! CTCTTTCAGAAGTACTTCTT+GGG - chr4.1:87370508-87370527 MS.gene054576:intron 35.0%
!! TCTCTTTCAGAAGTACTTCT+TGG - chr4.1:87370507-87370526 MS.gene054576:intron 35.0%
!!! ATTTTTTTTTACGGGGAAGG+GGG - chr4.1:87373970-87373989 MS.gene054576:intron 35.0%
!!! CATTTTTTTTTACGGGGAAG+GGG - chr4.1:87373969-87373988 MS.gene054576:intron 35.0%
!!! CTTTTACTTTTTCCCTTCTC+TGG + chr4.1:87371434-87371453 None:intergenic 35.0%
!!! TTCTTTTTTTGACAGGAAGG+AGG - chr4.1:87375477-87375496 MS.gene054576:intron 35.0%
!!! TTTCAAGGGTGAGAGTATTT+TGG - chr4.1:87373847-87373866 MS.gene054576:CDS 35.0%
AAAGCCTTTGACCTAAAGTC+AGG + chr4.1:87373319-87373338 None:intergenic 40.0%
AACTAACAGGTCCACTAAAG+AGG - chr4.1:87371386-87371405 MS.gene054576:intron 40.0%
AAGAAGCAATGCTTCATGCT+TGG - chr4.1:87371451-87371470 MS.gene054576:intron 40.0%
AATCAGTACGAAAGTAGGAG+TGG + chr4.1:87371118-87371137 None:intergenic 40.0%
ACCATACCTGTAGTTCATCT+TGG + chr4.1:87371503-87371522 None:intergenic 40.0%
ACCGATGAATGAGAGAACTT+CGG - chr4.1:87370254-87370273 MS.gene054576:CDS 40.0%
ACTAAGGAGTAAGGACCATT+TGG - chr4.1:87369942-87369961 MS.gene054576:CDS 40.0%
ACTCATCCTTACAAAACAGG+CGG + chr4.1:87373696-87373715 None:intergenic 40.0%
ACTCGAAGGGAAAAACTAAC+AGG - chr4.1:87371373-87371392 MS.gene054576:intron 40.0%
AGAATCCTATCTATCCGATG+TGG + chr4.1:87373631-87373650 None:intergenic 40.0%
ATACCATGTCACGAAAATCG+GGG + chr4.1:87373490-87373509 None:intergenic 40.0%
ATCAAGTGAACACTTCCTTG+TGG - chr4.1:87371207-87371226 MS.gene054576:intron 40.0%
ATCCCATTGATATCCAGAGA+AGG - chr4.1:87371418-87371437 MS.gene054576:intron 40.0%
ATGCACAATTGAGTATGGTG+TGG - chr4.1:87370572-87370591 MS.gene054576:intron 40.0%
ATTGCTCTATCTCAAAGGAC+CGG - chr4.1:87373899-87373918 MS.gene054576:intron 40.0%
ATTGGCACAGACAAGTACAT+CGG - chr4.1:87370359-87370378 MS.gene054576:intron 40.0%
CAGACTATAGGTCGAGAATA+GGG - chr4.1:87370602-87370621 MS.gene054576:intron 40.0%
CATTCTCAACCTGAAAAAGC+AGG + chr4.1:87374037-87374056 None:intergenic 40.0%
CCACAAAATAGCAGATCCAA+TGG + chr4.1:87372951-87372970 None:intergenic 40.0%
CGGTCATTCCATTAGATGAA+TGG - chr4.1:87376048-87376067 MS.gene054576:CDS 40.0%
CTATCGCAGATCACAGAAAA+TGG + chr4.1:87370185-87370204 None:intergenic 40.0%
CTCTCACCCTTGAAAAATGA+AGG + chr4.1:87373842-87373861 None:intergenic 40.0%
CTTCATATTGCAGGTACATC+TGG + chr4.1:87370451-87370470 None:intergenic 40.0%
CTTTAACACCAGTGTTAACC+TGG + chr4.1:87375959-87375978 None:intergenic 40.0%
GAATCCTATCTATCCGATGT+GGG + chr4.1:87373630-87373649 None:intergenic 40.0%
GATACCATGTCACGAAAATC+GGG + chr4.1:87373491-87373510 None:intergenic 40.0%
GATGATCTAATGGAGTGATG+TGG - chr4.1:87371572-87371591 MS.gene054576:CDS 40.0%
GATGCAAAGTTTCTTTCTCG+CGG - chr4.1:87375986-87376005 MS.gene054576:intron 40.0%
GCAACAAGACATACCAAGAT+TGG - chr4.1:87375651-87375670 MS.gene054576:intron 40.0%
GCCACAATATCCAAGCTTTA+AGG + chr4.1:87372868-87372887 None:intergenic 40.0%
GTACTCTCTTTGTCCCATAT+TGG - chr4.1:87375802-87375821 MS.gene054576:intron 40.0%
GTGTTAATACCTATCACCCA+TGG + chr4.1:87374162-87374181 None:intergenic 40.0%
GTTCTTACGAGAAATATGCG+TGG - chr4.1:87371475-87371494 MS.gene054576:intron 40.0%
TACCAATTTGGTTGTTTGGC+AGG + chr4.1:87370691-87370710 None:intergenic 40.0%
TAGTCCCACATCAGATAGAT+AGG - chr4.1:87373393-87373412 MS.gene054576:intron 40.0%
TCAGACTATAGGTCGAGAAT+AGG - chr4.1:87370601-87370620 MS.gene054576:intron 40.0%
TCATTCACATGCCTGACTTT+AGG - chr4.1:87373305-87373324 MS.gene054576:CDS 40.0%
TCCCATTGATATCCAGAGAA+GGG - chr4.1:87371419-87371438 MS.gene054576:intron 40.0%
TCCCTTCTCTGGATATCAAT+GGG + chr4.1:87371423-87371442 None:intergenic 40.0%
TCCGAAGTTCTCTCATTCAT+CGG + chr4.1:87370258-87370277 None:intergenic 40.0%
TCCTTGTCACAATCCTCAAA+GGG + chr4.1:87376094-87376113 None:intergenic 40.0%
TCTAATGGAATGACCGAAGA+AGG + chr4.1:87376044-87376063 None:intergenic 40.0%
TCTCTGATATACTATCGGTG+TGG - chr4.1:87369792-87369811 MS.gene054576:intron 40.0%
TCTTACGAGAAATATGCGTG+GGG - chr4.1:87371477-87371496 MS.gene054576:intron 40.0%
TGAGTAGTGGTAGCAGTAAA+TGG - chr4.1:87369492-87369511 MS.gene054576:CDS 40.0%
TGGCATAAACACTTGTGAGA+TGG + chr4.1:87375255-87375274 None:intergenic 40.0%
TGTGGCTGAAATCAGACTAT+AGG - chr4.1:87370590-87370609 MS.gene054576:intron 40.0%
TTCCCTTCTCTGGATATCAA+TGG + chr4.1:87371424-87371443 None:intergenic 40.0%
TTCCTGCCAAACAACCAAAT+TGG - chr4.1:87370686-87370705 MS.gene054576:intron 40.0%
TTCCTTGTCACAATCCTCAA+AGG + chr4.1:87376095-87376114 None:intergenic 40.0%
TTGAGTCACTCTTCTACCTT+TGG - chr4.1:87375618-87375637 MS.gene054576:intron 40.0%
! AAAAGCATAGCAAGACGCTT+AGG + chr4.1:87369551-87369570 None:intergenic 40.0%
! AATCCTCATAGTGGAACAAC+AGG - chr4.1:87374113-87374132 MS.gene054576:intron 40.0%
! ATCTTGGTATGTCTTGTTGC+CGG + chr4.1:87375651-87375670 None:intergenic 40.0%
! CTATTTCTTTCATTCTGGGG+AGG - chr4.1:87375443-87375462 MS.gene054576:intron 40.0%
! CTTTTGTGTCCATAAAGGTG+TGG - chr4.1:87372814-87372833 MS.gene054576:intron 40.0%
! GACTTTATTTGCAGCTTGCT+TGG - chr4.1:87375370-87375389 MS.gene054576:intron 40.0%
! GCAGAAGTTTATGTCACTTG+CGG - chr4.1:87374914-87374933 MS.gene054576:intron 40.0%
! TAGTACTAGCTTGATGCCAT+TGG - chr4.1:87372932-87372951 MS.gene054576:intron 40.0%
! TCTTCTCTTTTCGCCTTCTT+CGG - chr4.1:87376028-87376047 MS.gene054576:intron 40.0%
! TGTATTAGAGGCATGGATCT+TGG - chr4.1:87373263-87373282 MS.gene054576:intron 40.0%
!! CAATATCTCTGGCTTTGTCA+AGG + chr4.1:87372579-87372598 None:intergenic 40.0%
!! CATAAAGGTGTGGCTTTTGT+GGG - chr4.1:87372824-87372843 MS.gene054576:intron 40.0%
!! CCTTACAAAACTGGCTTGTA+CGG + chr4.1:87373457-87373476 None:intergenic 40.0%
!! GCATTTTAAGGACATGAGTG+TGG - chr4.1:87375562-87375581 MS.gene054576:intron 40.0%
!! GTGTTTTCGAGACAACCATA+AGG - chr4.1:87372364-87372383 MS.gene054576:intron 40.0%
!! TGTGTAGCTTTGTTGTGTAG+CGG - chr4.1:87370144-87370163 MS.gene054576:intron 40.0%
!! TTCAGAAGTACTTCTTGGGA+AGG - chr4.1:87370512-87370531 MS.gene054576:intron 40.0%
!!! CCATTGGATCTGCTATTTTG+TGG - chr4.1:87372948-87372967 MS.gene054576:intron 40.0%
!!! GAGAGTATTTTGGCAGATTC+TGG - chr4.1:87373857-87373876 MS.gene054576:CDS 40.0%
!!! TTGACACCACTTTTTGACTG+AGG + chr4.1:87371756-87371775 None:intergenic 40.0%
AACCAGGTCTTCATATGCAG+GGG + chr4.1:87371885-87371904 None:intergenic 45.0%
AAGAACTCTCGCATAGAGTC+GGG - chr4.1:87375701-87375720 MS.gene054576:intron 45.0%
AAGAGTGACTCAACTGTCTC+TGG + chr4.1:87375611-87375630 None:intergenic 45.0%
ACAACCAGGTCTTCATATGC+AGG + chr4.1:87371887-87371906 None:intergenic 45.0%
ACATGAGTGTGGGTACATCA+TGG - chr4.1:87375573-87375592 MS.gene054576:intron 45.0%
ACATGGTATCAGAGCCTATC+GGG - chr4.1:87373501-87373520 MS.gene054576:intron 45.0%
AGAATAGGTGGCAGAAAGGA+AGG - chr4.1:87376164-87376183 MS.gene054576:CDS 45.0%
AGACATACCAAGATTGGGGT+TGG - chr4.1:87375657-87375676 MS.gene054576:intron 45.0%
ATGTTGTTGTCTCACTTCCC+AGG - chr4.1:87375938-87375957 MS.gene054576:intron 45.0%
CAACCAGGTCTTCATATGCA+GGG + chr4.1:87371886-87371905 None:intergenic 45.0%
CAGATAGATTACTGCCTGCA+TGG - chr4.1:87372599-87372618 MS.gene054576:intron 45.0%
CATGCCTGACTTTAGGTCAA+AGG - chr4.1:87373312-87373331 MS.gene054576:CDS 45.0%
CCACAAAAGCCACACCTTTA+TGG + chr4.1:87372826-87372845 None:intergenic 45.0%
GAAGAACTCTCGCATAGAGT+CGG - chr4.1:87375700-87375719 MS.gene054576:intron 45.0%
GACATGGTATCAGAGCCTAT+CGG - chr4.1:87373500-87373519 MS.gene054576:intron 45.0%
GATTGTGACAAGGAACGAAG+CGG - chr4.1:87376100-87376119 MS.gene054576:CDS 45.0%
GCAACGATGCTTCATATTGC+AGG + chr4.1:87370460-87370479 None:intergenic 45.0%
GCATGTGTAGAAACTTACCC+CGG + chr4.1:87372695-87372714 None:intergenic 45.0%
GCCAAGATGAACTACAGGTA+TGG - chr4.1:87371499-87371518 MS.gene054576:CDS 45.0%
GGACGCTTCAAGTAATAAGC+TGG + chr4.1:87369530-87369549 None:intergenic 45.0%
GGCTACTCTCCTATCACATT+TGG - chr4.1:87374134-87374153 MS.gene054576:intron 45.0%
GTACATCATGGAACATCCTG+AGG - chr4.1:87375585-87375604 MS.gene054576:intron 45.0%
GTCTTCATATGCAGGGGAAA+AGG + chr4.1:87371879-87371898 None:intergenic 45.0%
TACAAAACAGGCGGCTTGTA+CGG + chr4.1:87373687-87373706 None:intergenic 45.0%
TACCAGCCTCAGTCAAAAAG+TGG - chr4.1:87371747-87371766 MS.gene054576:CDS 45.0%
TAGCCTGTTGTTCCACTATG+AGG + chr4.1:87374119-87374138 None:intergenic 45.0%
TAGTCCCACATCGGATAGAT+AGG - chr4.1:87373623-87373642 MS.gene054576:intron 45.0%
TCACCACAATCCAGAGTAGT+AGG - chr4.1:87372511-87372530 MS.gene054576:intron 45.0%
TCCTAGAATAGGTGGCAGAA+AGG - chr4.1:87376160-87376179 MS.gene054576:CDS 45.0%
TCCTTTCTGCCACCTATTCT+AGG + chr4.1:87376164-87376183 None:intergenic 45.0%
TCGCAGATCACAGAAAATGG+CGG + chr4.1:87370182-87370201 None:intergenic 45.0%
TGAGATGGCCTGCATACATT+TGG - chr4.1:87371081-87371100 MS.gene054576:intron 45.0%
TGTCTGTGCCAATGCTTCAT+AGG + chr4.1:87370352-87370371 None:intergenic 45.0%
TTCATCCATCTGCAGGTACT+CGG + chr4.1:87374832-87374851 None:intergenic 45.0%
TTGTCGTCTGCCAATCAATC+TGG - chr4.1:87371156-87371175 MS.gene054576:intron 45.0%
! ACCCTTTGAGGATTGTGACA+AGG - chr4.1:87376090-87376109 MS.gene054576:CDS 45.0%
! AGACCCAAAGTATCAGCAGA+AGG - chr4.1:87373922-87373941 MS.gene054576:intron 45.0%
! ATTTGTTAGCGGCCAACACT+CGG - chr4.1:87373363-87373382 MS.gene054576:intron 45.0%
! CTTGTGAGATGGTTTGGAAG+AGG + chr4.1:87375244-87375263 None:intergenic 45.0%
! GTTTATGTCACTTGCGGAAG+AGG - chr4.1:87374920-87374939 MS.gene054576:intron 45.0%
! TACAAGCCGCCTGTTTTGTA+AGG - chr4.1:87373687-87373706 MS.gene054576:intron 45.0%
!! AGTGGTGTCAATAGCTTTGG+AGG - chr4.1:87371765-87371784 MS.gene054576:CDS 45.0%
!! ATGCTTGCTTTGGGATCATC+TGG - chr4.1:87374873-87374892 MS.gene054576:intron 45.0%
!! CCATAAAGGTGTGGCTTTTG+TGG - chr4.1:87372823-87372842 MS.gene054576:intron 45.0%
!! CCGTACAAGCCAGTTTTGTA+AGG - chr4.1:87373454-87373473 MS.gene054576:intron 45.0%
!! GCTTTGGGATCATCTGGTTA+TGG - chr4.1:87374879-87374898 MS.gene054576:intron 45.0%
!! GTCAATAGCTTTGGAGGTCT+TGG - chr4.1:87371771-87371790 MS.gene054576:CDS 45.0%
!! GTGTAGCTTTGTTGTGTAGC+GGG - chr4.1:87370145-87370164 MS.gene054576:intron 45.0%
!!! GATTTGCTCCCTGCTTTTTC+AGG - chr4.1:87374025-87374044 MS.gene054576:intron 45.0%
!! ATTTATTAAAAAAAATAAAG+TGG + chr4.1:87375865-87375884 None:intergenic 5.0%
!! TTTGAAAATAAAAAATTATA+AGG + chr4.1:87374525-87374544 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTTGT+TGG - chr4.1:87372481-87372500 MS.gene054576:intron 5.0%
AAAGTGCATGATGGCACTGC+CGG - chr4.1:87371342-87371361 MS.gene054576:intron 50.0%
AACTAGCGTGCTTTGCTCCA+GGG - chr4.1:87374850-87374869 MS.gene054576:intron 50.0%
AAGAAGGCCACCTACTACTC+TGG + chr4.1:87372524-87372543 None:intergenic 50.0%
ACGAAAGTAGGAGTGGTGTC+AGG + chr4.1:87371111-87371130 None:intergenic 50.0%
ACGCTAGTTCATCCATCTGC+AGG + chr4.1:87374839-87374858 None:intergenic 50.0%
ATTCCTGACTCTGGCTGTGT+TGG - chr4.1:87373772-87373791 MS.gene054576:intron 50.0%
CAAGACACGCCTTTGATCAG+AGG + chr4.1:87369719-87369738 None:intergenic 50.0%
CAGGTCCACTAAAGAGGTCT+TGG - chr4.1:87371392-87371411 MS.gene054576:intron 50.0%
CAGGTGTGCCAAATGTATGC+AGG + chr4.1:87371092-87371111 None:intergenic 50.0%
CCACAATCCAGAGTAGTAGG+TGG - chr4.1:87372514-87372533 MS.gene054576:intron 50.0%
CCACCTACTACTCTGGATTG+TGG + chr4.1:87372517-87372536 None:intergenic 50.0%
CCTATCACATTTGGCGCCAT+GGG - chr4.1:87374143-87374162 MS.gene054576:intron 50.0%
CTCACTTCCCAGGTTAACAC+TGG - chr4.1:87375948-87375967 MS.gene054576:intron 50.0%
CTGCTGATACTTTGGGTCTC+CGG + chr4.1:87373921-87373940 None:intergenic 50.0%
GACTAAATCCACCCGAGTGT+TGG + chr4.1:87373378-87373397 None:intergenic 50.0%
GCCAAAGTGGCACCCAATAT+GGG + chr4.1:87375818-87375837 None:intergenic 50.0%
GGGAGTAGATCAGTGAGTAG+TGG - chr4.1:87369479-87369498 MS.gene054576:CDS 50.0%
GGTGGGATTTAGTCCCACAT+CGG - chr4.1:87373614-87373633 MS.gene054576:intron 50.0%
GTCGGGCTATGTTGGACTAA+AGG - chr4.1:87375718-87375737 MS.gene054576:intron 50.0%
TAAATCCCACCCCCAAGTGT+TGG + chr4.1:87373605-87373624 None:intergenic 50.0%
TAGGTGGCAGAAAGGAAGGT+CGG - chr4.1:87376168-87376187 MS.gene054576:CDS 50.0%
TCCAATTGCTTAGCCCCCAA+AGG + chr4.1:87371297-87371316 None:intergenic 50.0%
TCCTATCACATTTGGCGCCA+TGG - chr4.1:87374142-87374161 MS.gene054576:intron 50.0%
TCTGGTGTACGATGCACATG+TGG + chr4.1:87370433-87370452 None:intergenic 50.0%
TGCCAAAGTGGCACCCAATA+TGG + chr4.1:87375819-87375838 None:intergenic 50.0%
TGGCAGACGACAATTCACGT+CGG + chr4.1:87371149-87371168 None:intergenic 50.0%
TGTGTTAGCGGCCAACACTT+GGG - chr4.1:87373591-87373610 MS.gene054576:intron 50.0%
TTCAACCGAGTACCTGCAGA+TGG - chr4.1:87374824-87374843 MS.gene054576:intron 50.0%
TTCCCCTGCATATGAAGACC+TGG - chr4.1:87371880-87371899 MS.gene054576:intron 50.0%
TTCTACCTTTGGCGCCTAAC+CGG - chr4.1:87375629-87375648 MS.gene054576:intron 50.0%
TTTGTTAGCGGCCAACACTC+GGG - chr4.1:87373364-87373383 MS.gene054576:intron 50.0%
! ACACAGAAGCACACCCTTTG+AGG - chr4.1:87376078-87376097 MS.gene054576:CDS 50.0%
! GGTATGTCTTGTTGCCGGTT+AGG + chr4.1:87375646-87375665 None:intergenic 50.0%
! TCCTTTGGGGGCTAAGCAAT+TGG - chr4.1:87371293-87371312 MS.gene054576:CDS 50.0%
!! AACGGCGGGTGTTGATTGTT+TGG - chr4.1:87370726-87370745 MS.gene054576:intron 50.0%
!! CAAAACTGGCTTGTACGGTG+AGG + chr4.1:87373452-87373471 None:intergenic 50.0%
!! TCCCATATTGGGTGCCACTT+TGG - chr4.1:87375814-87375833 MS.gene054576:intron 50.0%
!!! CACCACTTTTTGACTGAGGC+TGG + chr4.1:87371752-87371771 None:intergenic 50.0%
!!! TTTTTTTACGGGGAAGGGGG+AGG - chr4.1:87373973-87373992 MS.gene054576:intron 50.0%
AAACTTACCCCGGTCCATCC+AGG + chr4.1:87372685-87372704 None:intergenic 55.0%
AAAGGAAGGTCGGTCGGGTT+AGG - chr4.1:87376178-87376197 MS.gene054576:CDS 55.0%
AAGTGCATGATGGCACTGCC+GGG - chr4.1:87371343-87371362 MS.gene054576:intron 55.0%
ACACAATCCTGGATGGACCG+GGG - chr4.1:87372675-87372694 MS.gene054576:intron 55.0%
ACTCAACTGTCTCTGGCCTC+AGG + chr4.1:87375604-87375623 None:intergenic 55.0%
AGATGCAGGAAGCCCAACGA+TGG + chr4.1:87373528-87373547 None:intergenic 55.0%
AGCCTATCGGGACCATCGTT+GGG - chr4.1:87373513-87373532 MS.gene054576:intron 55.0%
CAAGGACGTGCACACAATCC+TGG - chr4.1:87372664-87372683 MS.gene054576:intron 55.0%
CACACAATCCTGGATGGACC+GGG - chr4.1:87372674-87372693 MS.gene054576:intron 55.0%
CAGACGACAATTCACGTCGG+AGG + chr4.1:87371146-87371165 None:intergenic 55.0%
CATTTGGCGCCATGGGTGAT+AGG - chr4.1:87374150-87374169 MS.gene054576:intron 55.0%
CCCATGGCGCCAAATGTGAT+AGG + chr4.1:87374146-87374165 None:intergenic 55.0%
CCTGCATGGAACACACCTAC+AGG - chr4.1:87372613-87372632 MS.gene054576:intron 55.0%
CCTGTAGGTGTGTTCCATGC+AGG + chr4.1:87372616-87372635 None:intergenic 55.0%
CGCATAGAGTCGGGCTATGT+TGG - chr4.1:87375710-87375729 MS.gene054576:intron 55.0%
CTTCCTTGTGGCTGTGTTGC+CGG - chr4.1:87371219-87371238 MS.gene054576:intron 55.0%
GAACTAGCGTGCTTTGCTCC+AGG - chr4.1:87374849-87374868 MS.gene054576:intron 55.0%
GACGTGCACACAATCCTGGA+TGG - chr4.1:87372668-87372687 MS.gene054576:intron 55.0%
GATCCCAAAGCAAGCATCCC+TGG + chr4.1:87374870-87374889 None:intergenic 55.0%
GCACACAATCCTGGATGGAC+CGG - chr4.1:87372673-87372692 MS.gene054576:intron 55.0%
GCTCCAGGGATGCTTGCTTT+GGG - chr4.1:87374864-87374883 MS.gene054576:intron 55.0%
GTCTGACACGTGTCAGTGTC+TGG - chr4.1:87369740-87369759 MS.gene054576:intron 55.0%
GTGGGGCCAAGATGAACTAC+AGG - chr4.1:87371494-87371513 MS.gene054576:intron 55.0%
GTGTGTTAGCGGCCAACACT+TGG - chr4.1:87373590-87373609 MS.gene054576:intron 55.0%
GTGTTAGCGGCCAACACTTG+GGG - chr4.1:87373592-87373611 MS.gene054576:intron 55.0%
TCCCTTCGAGTCAACCTTCC+CGG + chr4.1:87371364-87371383 None:intergenic 55.0%
TGACCAACACAGCCAGAGTC+AGG + chr4.1:87373778-87373797 None:intergenic 55.0%
TGCTCCAGGGATGCTTGCTT+TGG - chr4.1:87374863-87374882 MS.gene054576:intron 55.0%
TGGCAGAAAGGAAGGTCGGT+CGG - chr4.1:87376172-87376191 MS.gene054576:CDS 55.0%
TGTTAGCGGCCAACACTTGG+GGG - chr4.1:87373593-87373612 MS.gene054576:intron 55.0%
TTCCTGCATCTCCACGCTTC+AGG - chr4.1:87373537-87373556 MS.gene054576:intron 55.0%
TTCCTTGTGGCTGTGTTGCC+GGG - chr4.1:87371220-87371239 MS.gene054576:intron 55.0%
! AGGCCCCGATTTTCGTGACA+TGG - chr4.1:87373484-87373503 MS.gene054576:intron 55.0%
! GACTCTGGCTGTGTTGGTCA+CGG - chr4.1:87373778-87373797 MS.gene054576:intron 55.0%
AACAGGCGGCTTGTACGGTG+AGG + chr4.1:87373682-87373701 None:intergenic 60.0%
AGCCCAACGATGGTCCCGAT+AGG + chr4.1:87373518-87373537 None:intergenic 60.0%
CAGCTGGGTCGCAAACTCTC+TGG - chr4.1:87372317-87372336 MS.gene054576:intron 60.0%
CTCCACGCTTCAGGCCCATT+GGG - chr4.1:87373546-87373565 MS.gene054576:intron 60.0%
GAGCCTATCGGGACCATCGT+TGG - chr4.1:87373512-87373531 MS.gene054576:intron 60.0%
GAGTTTGCGACCCAGCTGTC+AGG + chr4.1:87372315-87372334 None:intergenic 60.0%
GGCAGAAAGGAAGGTCGGTC+GGG - chr4.1:87376173-87376192 MS.gene054576:CDS 60.0%
TCCACGCTTCAGGCCCATTG+GGG - chr4.1:87373547-87373566 MS.gene054576:intron 60.0%
TCTCCACGCTTCAGGCCCAT+TGG - chr4.1:87373545-87373564 MS.gene054576:intron 60.0%
! TGTTGCCGGTTAGGCGCCAA+AGG + chr4.1:87375637-87375656 None:intergenic 60.0%
!! GCCGGGAAGGTTGACTCGAA+GGG - chr4.1:87371360-87371379 MS.gene054576:intron 60.0%
!! TGCCGGGAAGGTTGACTCGA+AGG - chr4.1:87371359-87371378 MS.gene054576:intron 60.0%
ACGCTTCAGCCCGCCCCAAT+GGG + chr4.1:87373563-87373582 None:intergenic 65.0%
ACGCTTCAGGCCCATTGGGG+CGG - chr4.1:87373550-87373569 MS.gene054576:intron 65.0%
AGCGGCCAACACTTGGGGGT+GGG - chr4.1:87373597-87373616 MS.gene054576:intron 65.0%
GCATGATGGCACTGCCGGGA+AGG - chr4.1:87371347-87371366 MS.gene054576:intron 65.0%
GGCCTGAAGCGTGGAGATGC+AGG + chr4.1:87373542-87373561 None:intergenic 65.0%
GTTAGCGGCCAACACTCGGG+TGG - chr4.1:87373367-87373386 MS.gene054576:intron 65.0%
TAGCGGCCAACACTTGGGGG+TGG - chr4.1:87373596-87373615 MS.gene054576:intron 65.0%
TGCCCGGCAACACAGCCACA+AGG + chr4.1:87371225-87371244 None:intergenic 65.0%
! GCGTGAGGGGGGTGTGTTAG+CGG - chr4.1:87373579-87373598 MS.gene054576:intron 65.0%
CACGCTTCAGCCCGCCCCAA+TGG + chr4.1:87373564-87373583 None:intergenic 70.0%
CGCTTCAGGCCCATTGGGGC+GGG - chr4.1:87373551-87373570 MS.gene054576:intron 70.0%
GCCCCAATGGGCCTGAAGCG+TGG + chr4.1:87373551-87373570 None:intergenic 70.0%
!! TGGGGCGGGCTGAAGCGTGA+GGG - chr4.1:87373565-87373584 MS.gene054576:intron 70.0%
!! TTGGGGCGGGCTGAAGCGTG+AGG - chr4.1:87373564-87373583 MS.gene054576:intron 70.0%
!! GGCGGGCTGAAGCGTGAGGG+GGG - chr4.1:87373568-87373587 MS.gene054576:intron 75.0%
!! GGGCGGGCTGAAGCGTGAGG+GGG - chr4.1:87373567-87373586 MS.gene054576:intron 75.0%
!! GGGGCGGGCTGAAGCGTGAG+GGG - chr4.1:87373566-87373585 MS.gene054576:intron 75.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 87369470 87376199 87369470 ID=MS.gene054576
chr4.1 mRNA 87369470 87376199 87369470 ID=MS.gene054576.t1;Parent=MS.gene054576
chr4.1 exon 87376035 87376199 87376035 ID=MS.gene054576.t1.exon1;Parent=MS.gene054576.t1
chr4.1 CDS 87376035 87376199 87376035 ID=cds.MS.gene054576.t1;Parent=MS.gene054576.t1
chr4.1 exon 87374705 87374752 87374705 ID=MS.gene054576.t1.exon2;Parent=MS.gene054576.t1
chr4.1 CDS 87374705 87374752 87374705 ID=cds.MS.gene054576.t1;Parent=MS.gene054576.t1
chr4.1 exon 87374154 87374342 87374154 ID=MS.gene054576.t1.exon3;Parent=MS.gene054576.t1
chr4.1 CDS 87374154 87374342 87374154 ID=cds.MS.gene054576.t1;Parent=MS.gene054576.t1
chr4.1 exon 87373804 87373916 87373804 ID=MS.gene054576.t1.exon4;Parent=MS.gene054576.t1
chr4.1 CDS 87373804 87373916 87373804 ID=cds.MS.gene054576.t1;Parent=MS.gene054576.t1
chr4.1 exon 87373284 87373349 87373284 ID=MS.gene054576.t1.exon5;Parent=MS.gene054576.t1
chr4.1 CDS 87373284 87373349 87373284 ID=cds.MS.gene054576.t1;Parent=MS.gene054576.t1
chr4.1 exon 87372973 87373144 87372973 ID=MS.gene054576.t1.exon6;Parent=MS.gene054576.t1
chr4.1 CDS 87372973 87373144 87372973 ID=cds.MS.gene054576.t1;Parent=MS.gene054576.t1
chr4.1 exon 87371726 87371815 87371726 ID=MS.gene054576.t1.exon7;Parent=MS.gene054576.t1
chr4.1 CDS 87371726 87371815 87371726 ID=cds.MS.gene054576.t1;Parent=MS.gene054576.t1
chr4.1 exon 87371498 87371622 87371498 ID=MS.gene054576.t1.exon8;Parent=MS.gene054576.t1
chr4.1 CDS 87371498 87371622 87371498 ID=cds.MS.gene054576.t1;Parent=MS.gene054576.t1
chr4.1 exon 87371286 87371351 87371286 ID=MS.gene054576.t1.exon9;Parent=MS.gene054576.t1
chr4.1 CDS 87371286 87371351 87371286 ID=cds.MS.gene054576.t1;Parent=MS.gene054576.t1
chr4.1 exon 87370927 87371035 87370927 ID=MS.gene054576.t1.exon10;Parent=MS.gene054576.t1
chr4.1 CDS 87370927 87371035 87370927 ID=cds.MS.gene054576.t1;Parent=MS.gene054576.t1
chr4.1 exon 87370728 87370826 87370728 ID=MS.gene054576.t1.exon11;Parent=MS.gene054576.t1
chr4.1 CDS 87370728 87370826 87370728 ID=cds.MS.gene054576.t1;Parent=MS.gene054576.t1
chr4.1 exon 87370205 87370285 87370205 ID=MS.gene054576.t1.exon12;Parent=MS.gene054576.t1
chr4.1 CDS 87370205 87370285 87370205 ID=cds.MS.gene054576.t1;Parent=MS.gene054576.t1
chr4.1 exon 87369927 87370097 87369927 ID=MS.gene054576.t1.exon13;Parent=MS.gene054576.t1
chr4.1 CDS 87369927 87370097 87369927 ID=cds.MS.gene054576.t1;Parent=MS.gene054576.t1
chr4.1 exon 87369470 87369709 87369470 ID=MS.gene054576.t1.exon14;Parent=MS.gene054576.t1
chr4.1 CDS 87369470 87369709 87369470 ID=cds.MS.gene054576.t1;Parent=MS.gene054576.t1
Gene Sequence

>MS.gene054576

ATGGCGAGAGGGAGTAGATCAGTGAGTAGTGGTAGCAGTAAATGGAGATACTGTAATCCAGCTTATTACTTGAAGCGTCCTAAGCGTCTTGCTATGCTTTTCATCGTTTTCGTTTCGGTTTCTTTTATTGTTTGGGATCGTCAAACTTTAGTCAGAGAATACCAGGTATGTATTTCTTCATTTGTTTGTGTATCTCATTCTTTTGTTTCAATTCTGTGTTTGGAGATCATGATTATATTATCAACACCTCTGATCAAAGGCGTGTCTTGTGTCTGACACGTGTCAGTGTCTGGCGACATGTGACTGTATTTAATTAATTTATTCTCTGATATACTATCGGTGTGGACGTGTCAGTGTTGATTTCGTGTCTAGTGTTCATAGATCATATAGGATTTGTAAGAAGGAAAGGATTATACATAGAATAGCACTTGAGTGCTACTGTTTGTTTGACATCCTATACTGATTTGATATTACTAAGGAGTAAGGACCATTTGGATTAGCTCTTAGTTTATGGGTGCTTCTTAGATAAAATAGGTTTATGATTTTTCACTTGGGGATAGTGTTGTTAAATAGAGGCTATGATGGCGCTATCAAGATATAGTGTAGTGAAATTTTAGTAAATTGATATTGTTCTGTGATAAGGTGTTTGATATTAAATGTTGTCAAATAGCGACTGTGTAGCTTTGTTGTGTAGCGGGATTTGAATGAACCGCCATTTTCTGTGATCTGCGATAGATAATACTGTGTAGAAAGAATTTTTAATAAAATTGTAGATATTTTATGAACCGATGAATGAGAGAACTTCGGAAAATATCGAGATACAGAAGCTTATTTAACTTAGTTGAGAAGCCGTTTTAATGTTCTTTTTTATAGTTATTGCCTATGAAGCATTGGCACAGACAAGTACATCGGACACGTCATTGATATTGACATGTGACCATCGGTAATAATTGAATGTAACCACATGTGCATCGTACACCAGATGTACCTGCAATATGAAGCATCGTTGCTACATATTGCAAGATTCATTTAGTATTTCTCTTTCAGAAGTACTTCTTGGGAAGGTTAATATAGCAGTGATACTTTTGGAGGTTTTTCGTAAATGCACAATTGAGTATGGTGTGGCTGAAATCAGACTATAGGTCGAGAATAGGGTTTATTCCATTTTTAATCTATTGTACAAGATAATGAGTAGTTGTGGAGTTTTCATGTTTGATTCCTGCCAAACAACCAAATTGGTAGTTATAGAATACTACAACGGCGGGTGTTGATTGTTTGGCAAAACTTTGTAGCATATATTGTGGGCGTGATTTTAGTGTATGATTTAGTTTTGTTTTAAGTGTAACTTTATTTTTAGAGGGATGATGAAATTATTTTTGATTTTTTTGGCACTTGAATAACTTGGTTAATTTCACTGCCAGTAGATAACTGTTTTTATTAAATACAGGTTGAAGTTGCTGAGCTACAGAAAGAAATAACCGACTTGCATAATTTGGTAAGAAAATATCATATATGCTTAAACTTTTGCTGCTGCACGTGTTGTGATTTTAGTTCCTTAAAAACATTCCATATCATTTCATTTTTCCAATAAATAACAATGAAAAGAAGGAATGAGATGGCCTGCATACATTTGGCACACCTGACACCACTCCTACTTTCGTACTGATTGAAAACCTCCGACGTGAATTGTCGTCTGCCAATCAATCTGGCACAAAATTAAATCTTATCTTTTCCATTATCAAGTGAACACTTCCTTGTGGCTGTGTTGCCGGGCAGAGTTCTTATTTGAATGATTGACTTTTGAAACTATTTTTTATTATTTTTCCTTTGGGGGCTAAGCAATTGGAATTGTTTCAGTTGGAAGAGTCAAATAAAGTGCATGATGGCACTGCCGGGAAGGTTGACTCGAAGGGAAAAACTAACAGGTCCACTAAAGAGGTCTTGGATAATCCCATTGATATCCAGAGAAGGGAAAAAGTAAAAGAAGCAATGCTTCATGCTTGGAGTTCTTACGAGAAATATGCGTGGGGCCAAGATGAACTACAGGTATGGTCAATCTCTATTGCGAACACTCAGCCTTGTACTTTTTTGTTTTATTGCATGATGATCTAATGGAGTGATGTGGTTATTTGGCGACACTTATGTTATATGTTCTATTACTGATTGTATGTTCTTGAATGGTACATGATATAAATTGGTTTGTTTTTAGCATAATAATTAAACACTTCACTCGTTAAATTTACATTTTTCTTAATTAATTGTTTTTATTGTTATTGCTACCAGCCTCAGTCAAAAAGTGGTGTCAATAGCTTTGGAGGTCTTGGAGCAACTTTAATTGATTCTCTTGATACACTATACATTATGGGTCTCGATGAACAGTTTCAGAAAGCCCGAGAGTAAGTGTAACCTTTTCCCCTGCATATGAAGACCTGGTTGTTATTGTTTTTTGCTTCCACCTCTATACTCATTTAGAATCATAGTGATCGAGTTGTTTCTAATATTATATTTGGCAAAGGTTCTTGCATATAGAGTAGAAATTTTACTTTTTTTTTTTTGTTTTCTATTTTTATCTCTTCCAATTTTATTGCTGTTCTAGATGAACATTTCATGGTTATAGTGTTTAACTTGTATGGTCTGCCTTGTCAAAAAACAAAACTTGTATGGTTTGATTCTAATACATGTATTTTTTCGTCCTATTTAACTCTTTATTGCTGCAAAATTTCCTAATTCATAAAAGTTACATTAACTTGCTTTAATTACTTTCTATATCTGTATATCTAATGTTCAATTGTGATACTCCTAGTTAGGCTTTATTACATTTCTTCTGACAGTAATACATTATCCTGACAGCTGGGTCGCAAACTCTCTGGATTTTAACAAGGATTATGAAGCAAGTGTTTTCGAGACAACCATAAGGTTACTTTATAAGGTTTACATAGCAGTTTAAAGTCCCTTCCAATTAAAAAAGTATAATAAACTTAACTTACGTGGTTGACAACTAATGTTTTTTTTTTTTTTTTTTTTTTTTTGTTGGTCTATTTTCACCACAATCCAGAGTAGTAGGTGGCCTTCTTAGTACATACGATCTTTCAGGCGACAAAATTTTCCTTGACAAAGCCAGAGATATTGCAGATAGATTACTGCCTGCATGGAACACACCTACAGGAATTCCTTATAACATTATCAACTTGTCACAAGGACGTGCACACAATCCTGGATGGACCGGGGTAAGTTTCTACACATGCATTTCAATCTTACTGAACAATGAACACTGAAGATTTAAGATATTGCTTTCATGTTCCATAGGCCTCAATGTTAAGTTAACTACAAGCCATTGTTTACAACTTTTGTGTCCATAAAGGTGTGGCTTTTGTGGGTTTACTCCTTGATCTTAACCTTAAAGCTTGGATATTGTGGCTGCAAGTCATCTTTCATGCTTTATGTAACCTTTTGAACAAAATATAGTACTAGCTTGATGCCATTGGATCTGCTATTTTGTGGCTTGTTTGAATGTGTTTTTAATAGAAGGCTTTTTTACAAGAGCTTCCTCCAGTAGTCAATAAAAACAAAAAAAAAAAAGTTTAGATGCAACACTCTAGAAGTCTTTTTTTTTTTTTTTTTTTTGTGTTTGAAACTTCTCCATGTTTTCATGATTATCTTTTGCTTGGTCTTTTTCTGTTTTCTTTCATAGACATGAAAAAACAATGCAGGGACCTTTCTTGCTAAGTATTGATCAAAGCAATTACTGCTTTCTAATGTTATTCGTGGAAAAATAGTATTTCATTTCCATATTTGTATTAGAGGCATGGATCTTGGCTAGTTAATTTTGCAAAGATCATTCACATGCCTGACTTTAGGTCAAAGGCTTTCTATGTTAGTTCTACGAGAGTATGATTTGTTAGCGGCCAACACTCGGGTGGATTTAGTCCCACATCAGATAGATAGGATTCTTGAGAAGAGTTTATAAAGAGGAGGCACTCCTCACCGTACAAGCCAGTTTTGTAAGGATGAGTTAGGCCCCGATTTTCGTGACATGGTATCAGAGCCTATCGGGACCATCGTTGGGCTTCCTGCATCTCCACGCTTCAGGCCCATTGGGGCGGGCTGAAGCGTGAGGGGGGTGTGTTAGCGGCCAACACTTGGGGGTGGGATTTAGTCCCACATCGGATAGATAGGATTCTTGAGAAGAGTTTATAAAGAGGAGGCACTCCTCACCGTACAAGCCGCCTGTTTTGTAAGGATGAGTTAGGCCCCGTTTTTCGTGACATGATTAACCAATTTTAACTTTTATTCTAATTTTGTATTCCTGACTCTGGCTGTGTTGGTCACGGACACTTGAGCCGCTTTATGAGTTTCTGATTCCTTTTTGCCTTCATTTTTCAAGGGTGAGAGTATTTTGGCAGATTCTGGCACTGAACAACTAGAGTTCATTGCTCTATCTCAAAGGACCGGAGACCCAAAGTATCAGCAGAAGGTTTTTAAATTCAACTCCATATATTCATTTTTTTTTACGGGGAAGGGGGAGGAGTTACATTTTTCTAGCAATGCATCAATTGATTTGCTCCCTGCTTTTTCAGGTTGAGAATGTAATAACAGTGCTTAATAAAACATTCCCTGATGATGGATTACTTCCTATCTATATCAATCCTCATAGTGGAACAACAGGCTACTCTCCTATCACATTTGGCGCCATGGGTGATAGGTATTAACACAATTTAATGACCATCTTTTTACACGATAAAAGCATAACAAACTTCTTCTTTAGTTAGTACTGTCTGGGCATTGTTAACTTCTAATCATCTTATTCTGTGTTAATTTGGTCTAACTTGTGAATGACACCAATTGCAGTTTTTATGAATACTTGCTTAAAGTTTGGGTACAAGGGAATAAGACTCTAGCTGTAAAACTTTATAGGTGAGAATAACGCACCACCTACTTCATCATGTTTTATACAATGAGTTCATTCTGTAATCAAATTGTCATTTGAATGATAGTTCCTTGGATCAATGAAAGAATTATGTATTTTTGTATTTCAATTATCATAGTTAAAGACCTTATAATTTTTTATTTTCAAATAAACGTAGAATAGGAAGATAAAGAATTAGCAGTTTGAACTGTTCTTTGACTGATTTTTTCTTCCATTTCTTTTTAATCTCTAAAACAGAGATATGTGGGAGAAATCAATGAAAGGTCTGTTAAGTTTGATTCGGAAGTCAACGCCATCTTCCTTTACTTATATATGTGAGAAGAGTGGAGGATCTCTCACTGACAAAGTATGATTCTGCATTGCAATACTGGTATTGCCGCATTTAATATTTACCATTGATGTATTGGATGAAAGTATAATTTTTTCATTCAACCGAGTACCTGCAGATGGATGAACTAGCGTGCTTTGCTCCAGGGATGCTTGCTTTGGGATCATCTGGTTATGGTCCTGATGATTCGCAGAAGTTTATGTCACTTGCGGAAGAGGTATGTTTTAATAGCCATTTGAAAAGCCTTAATGTGCTTGTTCTGTTGACTTACTTGTTTTAGTCTTGACCTATCAATATACAAAAGCCATGTTTGGATAAACAACTTAATTAAGTGCTTATAGTATAAGCACTAACCATGTAAATGCTTTTGTGTTAGCTATTTGCCTATTTCTATAGCAAAAGATAAAATAAAGTCAAATTGTTTCCATTTATAAGCGGTTTTCATAAACTATCACGGAGAGCTTATGAAAATAAGCTGAAAACAACTTATGAACACATCATAAGCTATTTTTATGACCTCTTCCAAACCATCTCACAAGTGTTTATGCCAGTCGATTAGTTCAATTAAGTCAATCCAAACTTACTCTACATGTATTTTATATCAACTTAAGTTTAGCCGTCTTTATGAAGTTGTCATACTCACGAGACTTTATTTGCAGCTTGCTTGGACATGTTATAACTTCTACCAATCAACTCCAACAAAATTAGCTGGAGAGAACTATTTCTTTCATTCTGGGGAGGTTAGTTACTTTTTCTTTTTTTGACAGGAAGGAGGTTAGTTACTTGTTTATTTAAAGATTTGCAATTTGAAAATTGTGTGATCTGAAATTTACTTCTGCATTTTAAGGACATGAGTGTGGGTACATCATGGAACATCCTGAGGCCAGAGACAGTTGAGTCACTCTTCTACCTTTGGCGCCTAACCGGCAACAAGACATACCAAGATTGGGGTTGGAATATATTTCAAGCTTTCGAGAAGAACTCTCGCATAGAGTCGGGCTATGTTGGACTAAAGGATGTAAGTACACCTCAATTTCACATTTAATAATGTGTTTGTGTTTGCGTTATTATTGTTTTGTACTCTCTTTGTCCCATATTGGGTGCCACTTTGGCAAAAAAAAAGTCTCACAATAAGTGCCACTTTATTTTTTTTAATAAATCATTACTCCCAAATTAATACTATGTGCATCACTATTTTTAGCTTCTACATCACATGTTGTTGTCTCACTTCCCAGGTTAACACTGGTGTTAAAGACAACATGATGCAAAGTTTCTTTCTCGCGGAGACACTGAAGTATCTTTATCTTCTCTTTTCGCCTTCTTCGGTCATTCCATTAGATGAATGGGTATTCAACACAGAAGCACACCCTTTGAGGATTGTGACAAGGAACGAAGCGGAACCTGTTAAGAACTCAAATGAGAAGCAAAAATCTTTTCCTAGAATAGGTGGCAGAAAGGAAGGTCGGTCGGGTTAG

Protein sequence

>MS.gene054576.t1

MARGSRSVSSGSSKWRYCNPAYYLKRPKRLAMLFIVFVSVSFIVWDRQTLVREYQVEVAELQKEITDLHNLLEESNKVHDGTAGKVDSKGKTNRSTKEVLDNPIDIQRREKVKEAMLHAWSSYEKYAWGQDELQPQSKSGVNSFGGLGATLIDSLDTLYIMGLDEQFQKARDWVANSLDFNKDYEASVFETTIRVVGGLLSTYDLSGDKIFLDKARDIADRLLPAWNTPTGIPYNIINLSQGRAHNPGWTGGESILADSGTEQLEFIALSQRTGDPKYQQKVENVITVLNKTFPDDGLLPIYINPHSGTTGYSPITFGAMGDSFYEYLLKVWVQGNKTLAVKLYRDMWEKSMKGLLSLIRKSTPSSFTYICEKSGGSLTDKMDELACFAPGMLALGSSGYGPDDSQKFMSLAEELAWTCYNFYQSTPTKLAGENYFFHSGEDMSVGTSWNILRPETVESLFYLWRLTGNKTYQDWGWNIFQAFEKNSRIESGYVGLKDVNTGVKDNMMQSFFLAETLKYLYLLFSPSSVIPLDEWVFNTEAHPLRIVTRNEAEPVKNSNEKQKSFPRIGGRKEGRSG