Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63700.t1 | XP_013444959.1 | 98.6 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 1.30E-195 | 692.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63700.t1 | A8IXB8 | 57.4 | 357 | 140 | 4 | 6 | 350 | 5 | 361 | 1.3e-103 | 377.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63700.t1 | A0A072TNB3 | 98.6 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 9.2e-196 | 692.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005906 | MS.gene63700 | PPI |
| MS.gene99989 | MS.gene63700 | PPI |
| MS.gene09533 | MS.gene63700 | PPI |
| MS.gene34068 | MS.gene63700 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63700.t1 | MTR_8g032880 | 98.603 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 0.0 | 729 |
| MS.gene63700.t1 | MTR_1g094680 | 32.817 | 323 | 176 | 11 | 21 | 308 | 33 | 349 | 2.35e-45 | 159 |
| MS.gene63700.t1 | MTR_1g094680 | 32.817 | 323 | 176 | 11 | 21 | 308 | 82 | 398 | 4.23e-45 | 159 |
| MS.gene63700.t1 | MTR_4g058005 | 30.503 | 318 | 183 | 8 | 21 | 307 | 62 | 372 | 3.27e-43 | 154 |
| MS.gene63700.t1 | MTR_1g094680 | 35.169 | 236 | 121 | 8 | 21 | 226 | 8 | 241 | 4.84e-37 | 134 |
| MS.gene63700.t1 | MTR_1g094680 | 35.169 | 236 | 121 | 8 | 21 | 226 | 82 | 315 | 6.45e-36 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63700.t1 | AT1G01910 | 82.521 | 349 | 61 | 0 | 6 | 354 | 5 | 353 | 0.0 | 581 |
| MS.gene63700.t1 | AT1G01910 | 82.521 | 349 | 61 | 0 | 6 | 354 | 5 | 353 | 0.0 | 581 |
| MS.gene63700.t1 | AT1G01910 | 82.521 | 349 | 61 | 0 | 6 | 354 | 5 | 353 | 0.0 | 581 |
| MS.gene63700.t1 | AT1G01910 | 86.149 | 296 | 41 | 0 | 6 | 301 | 5 | 300 | 0.0 | 516 |
| MS.gene63700.t1 | AT1G01910 | 80.973 | 226 | 43 | 0 | 129 | 354 | 24 | 249 | 4.18e-136 | 387 |
| MS.gene63700.t1 | AT3G10350 | 31.988 | 322 | 179 | 10 | 21 | 308 | 88 | 403 | 1.12e-44 | 159 |
| MS.gene63700.t1 | AT3G10350 | 32.602 | 319 | 172 | 10 | 21 | 308 | 119 | 425 | 5.37e-43 | 154 |
| MS.gene63700.t1 | AT5G60730 | 32.792 | 308 | 171 | 9 | 32 | 308 | 81 | 383 | 1.12e-33 | 129 |
Find 70 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTCTTTGAAGAATAAATT+TGG | 0.178410 | 8.4:-62958547 | MS.gene63700:CDS |
| ACCAACGAAAACCCACTTTA+AGG | 0.186644 | 8.4:+62961988 | None:intergenic |
| AAAACCCCTACTTTGGTTAA+TGG | 0.187000 | 8.4:-62961830 | MS.gene63700:CDS |
| TACAGTTGAGCATGAGGATA+TGG | 0.246895 | 8.4:-62961233 | MS.gene63700:CDS |
| GAAAATGCAGCAGAAGTATT+TGG | 0.259754 | 8.4:-62957375 | MS.gene63700:CDS |
| ATGGGAATTGCAACAGTCTA+AGG | 0.268606 | 8.4:+62958599 | None:intergenic |
| TTTGGCATGGGTGATGATTT+TGG | 0.286567 | 8.4:-62957916 | MS.gene63700:CDS |
| ACTTTAAGGTTTCTTGTTCT+AGG | 0.289287 | 8.4:+62962002 | None:intergenic |
| TGTCTTTGAAGAATAAATTT+GGG | 0.291371 | 8.4:-62958546 | MS.gene63700:CDS |
| AAAAGAGGCAGAAGAAGAAT+TGG | 0.294022 | 8.4:-62956574 | MS.gene63700:CDS |
| CATTCTTGCTTTAAGTAACT+TGG | 0.319005 | 8.4:+62957397 | None:intergenic |
| GAGCTAGCTGGTGCAATTCC+TGG | 0.328730 | 8.4:-62961178 | MS.gene63700:CDS |
| GAATTGGAGAGAGTTAAAAC+AGG | 0.348023 | 8.4:-62956558 | MS.gene63700:CDS |
| TGTAATGTTCCTTCTGGTAA+TGG | 0.356987 | 8.4:+62962031 | None:intergenic |
| TTCATAAAGCGAGAGGAATT+CGG | 0.357721 | 8.4:+62957595 | None:intergenic |
| TCATAAAGCGAGAGGAATTC+GGG | 0.385422 | 8.4:+62957596 | None:intergenic |
| CATCATACAACATGTAAAAC+TGG | 0.392796 | 8.4:+62957351 | None:intergenic |
| CTCATAGCCTCATCAATTCC+AGG | 0.396145 | 8.4:+62961160 | None:intergenic |
| AGTGCAAATTGACAGGTTAC+TGG | 0.397669 | 8.4:-62956711 | MS.gene63700:intron |
| TCACAGATGACTCGCATGTT+TGG | 0.400073 | 8.4:-62957934 | MS.gene63700:intron |
| TACTTGATCTCTACTGCATA+TGG | 0.414553 | 8.4:+62956638 | None:intergenic |
| GCTTTATGAAACAGAAAGAT+TGG | 0.417282 | 8.4:-62957582 | MS.gene63700:CDS |
| ACAAACCATGGCATAGAGAT+TGG | 0.427918 | 8.4:+62961802 | None:intergenic |
| GCAATCCTTGGGAAGCTAGA+AGG | 0.429425 | 8.4:-62957886 | MS.gene63700:CDS |
| TAGAACAAGAAACCTTAAAG+TGG | 0.452112 | 8.4:-62962000 | MS.gene63700:CDS |
| GAGAAACCATTAACCAAAGT+AGG | 0.484214 | 8.4:+62961824 | None:intergenic |
| TTTGGTGAAGATGCAATCCT+TGG | 0.487877 | 8.4:-62957898 | MS.gene63700:CDS |
| AGAAACCATTAACCAAAGTA+GGG | 0.499369 | 8.4:+62961825 | None:intergenic |
| ACAAAACAACTTACCTCTTG+TGG | 0.500305 | 8.4:+62957299 | None:intergenic |
| ACAGTTGAGCATGAGGATAT+GGG | 0.500666 | 8.4:-62961232 | MS.gene63700:CDS |
| CAAGTTATCTTCGACGATGA+AGG | 0.502112 | 8.4:-62957509 | MS.gene63700:intron |
| GAGGATATGGGTAGTTCTGA+TGG | 0.502699 | 8.4:-62961220 | MS.gene63700:CDS |
| TATGGGTAGTTCTGATGGGA+TGG | 0.510623 | 8.4:-62961215 | MS.gene63700:CDS |
| TTTCTCCAATCTCTATGCCA+TGG | 0.510985 | 8.4:-62961807 | MS.gene63700:intron |
| TCATTCCTTCTAGCTTCCCA+AGG | 0.518353 | 8.4:+62957881 | None:intergenic |
| TTTCAGATTGGTGCAGACAA+TGG | 0.535803 | 8.4:-62958665 | MS.gene63700:intron |
| GTATTTGATACTGCTCCCAC+TGG | 0.540064 | 8.4:-62958628 | MS.gene63700:CDS |
| TTGGTGAAGATGCAATCCTT+GGG | 0.541753 | 8.4:-62957897 | MS.gene63700:CDS |
| GTTGGTGGCAAAGGTGGTGT+TGG | 0.544218 | 8.4:-62961971 | MS.gene63700:CDS |
| ATTGCAACAGTCTAAGGGTA+TGG | 0.549459 | 8.4:+62958605 | None:intergenic |
| TTTAGAAAAGGGTCTTGCAA+AGG | 0.554997 | 8.4:-62958572 | MS.gene63700:CDS |
| AGTCTAAGGGTATGGCCAGT+GGG | 0.561604 | 8.4:+62958613 | None:intergenic |
| TGGGAAGCTAGAAGGAATGA+AGG | 0.562365 | 8.4:-62957878 | MS.gene63700:CDS |
| GCTGCCACTGCTTCCACAAG+AGG | 0.562957 | 8.4:-62957312 | MS.gene63700:intron |
| GTCTTTGAAGAATAAATTTG+GGG | 0.567862 | 8.4:-62958545 | MS.gene63700:CDS |
| AATTTGTTCAATGAGCTAGC+TGG | 0.584569 | 8.4:-62961190 | MS.gene63700:CDS |
| AGAACAAGAAACCTTAAAGT+GGG | 0.586075 | 8.4:-62961999 | MS.gene63700:CDS |
| GCATCGCTAAGATTATGAGC+AGG | 0.586661 | 8.4:+62961872 | None:intergenic |
| CAGTCTAAGGGTATGGCCAG+TGG | 0.587770 | 8.4:+62958612 | None:intergenic |
| ATATCCTCATGCTCAACTGT+AGG | 0.592291 | 8.4:+62961235 | None:intergenic |
| TTTCTGTTTCATAAAGCGAG+AGG | 0.594935 | 8.4:+62957588 | None:intergenic |
| AATTGGAGAGAGTTAAAACA+GGG | 0.596703 | 8.4:-62956557 | MS.gene63700:CDS |
| GATGACTCGCATGTTTGGCA+TGG | 0.600222 | 8.4:-62957929 | MS.gene63700:CDS |
| GCTAAGATTATGAGCAGGAT+CGG | 0.605307 | 8.4:+62961877 | None:intergenic |
| ATCGGTTGAGATAATGAGAA+CGG | 0.607262 | 8.4:+62961895 | None:intergenic |
| GGATCCTACAGTTGAGCATG+AGG | 0.607923 | 8.4:-62961239 | MS.gene63700:CDS |
| AGTTAAAACAGGGAAGAACA+AGG | 0.610225 | 8.4:-62956547 | MS.gene63700:CDS |
| AGGATATGGGTAGTTCTGAT+GGG | 0.617467 | 8.4:-62961219 | MS.gene63700:CDS |
| GCTACAACACCAGTTAAAAG+AGG | 0.619245 | 8.4:-62956589 | MS.gene63700:CDS |
| TGGGAATTGCAACAGTCTAA+GGG | 0.619370 | 8.4:+62958600 | None:intergenic |
| GAAACCATTAACCAAAGTAG+GGG | 0.628988 | 8.4:+62961826 | None:intergenic |
| CTACTGCATATGGATTCATA+CGG | 0.629456 | 8.4:+62956648 | None:intergenic |
| CTTACCTCTTGTGGAAGCAG+TGG | 0.634536 | 8.4:+62957308 | None:intergenic |
| GCGGTTAGAGAATAGAGTAA+CGG | 0.642769 | 8.4:-62956613 | MS.gene63700:CDS |
| GGGAATGCAAACACAGACAA+AGG | 0.643109 | 8.4:+62957616 | None:intergenic |
| ATGACTCGCATGTTTGGCAT+GGG | 0.644788 | 8.4:-62957928 | MS.gene63700:CDS |
| GAAGATCAACCATTACCAGA+AGG | 0.651887 | 8.4:-62962040 | MS.gene63700:CDS |
| TGCAATTCCTGGAATTGATG+AGG | 0.657803 | 8.4:-62961167 | MS.gene63700:CDS |
| TCTTTGAAGAATAAATTTGG+GGG | 0.677618 | 8.4:-62958544 | MS.gene63700:CDS |
| GCAGTAGAGATCAAGTAGAG+CGG | 0.707129 | 8.4:-62956632 | MS.gene63700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAAGTTTATTGAT+TGG | + | chr8.4:62960861-62960880 | None:intergenic | 10.0% |
| !! | AAAAATTGAAAATTTCAAAA+AGG | + | chr8.4:62956831-62956850 | None:intergenic | 10.0% |
| !! | AAAATTGAAAATTTCAAAAA+GGG | + | chr8.4:62956830-62956849 | None:intergenic | 10.0% |
| !! | TAGATTCATAAAAAATAAAA+GGG | + | chr8.4:62956972-62956991 | None:intergenic | 10.0% |
| !! | TCATAAAAATAAAATAAAAG+GGG | + | chr8.4:62957072-62957091 | None:intergenic | 10.0% |
| !!! | TAACTTAATTTTATATAAAG+GGG | - | chr8.4:62958288-62958307 | MS.gene63700:intron | 10.0% |
| !!! | TTCATTTTTTATTTTGTAAT+TGG | - | chr8.4:62960514-62960533 | MS.gene63700:intron | 10.0% |
| !! | AAAAATCAAAAATTGACAAA+AGG | + | chr8.4:62957108-62957127 | None:intergenic | 15.0% |
| !! | AAAAATTGAAAATTAACAAC+AGG | + | chr8.4:62957214-62957233 | None:intergenic | 15.0% |
| !! | AAAAATTGAAAATTGACAAA+AGG | + | chr8.4:62956902-62956921 | None:intergenic | 15.0% |
| !! | AAAATCAAAAATTGACAAAA+GGG | + | chr8.4:62957107-62957126 | None:intergenic | 15.0% |
| !! | AAAATTGAAAATTAACAACA+GGG | + | chr8.4:62957213-62957232 | None:intergenic | 15.0% |
| !! | AAAATTGAAAATTGACAAAA+GGG | + | chr8.4:62956901-62956920 | None:intergenic | 15.0% |
| !! | ATTATTTCACACAAAATATT+AGG | - | chr8.4:62959128-62959147 | MS.gene63700:intron | 15.0% |
| !! | ATTCATAAAATTAAAGTCTA+AGG | + | chr8.4:62957180-62957199 | None:intergenic | 15.0% |
| !! | CTAGATTCATAAAAAATAAA+AGG | + | chr8.4:62956973-62956992 | None:intergenic | 15.0% |
| !! | GAAAAATACAAACAATTATA+AGG | + | chr8.4:62960928-62960947 | None:intergenic | 15.0% |
| !! | TTATTTCACACAAAATATTA+GGG | - | chr8.4:62959129-62959148 | MS.gene63700:intron | 15.0% |
| !!! | AATTTTCAATTTTTTGATTG+CGG | - | chr8.4:62956837-62956856 | MS.gene63700:intron | 15.0% |
| !!! | CTTTTATTTTTTATGAATCT+AGG | - | chr8.4:62956971-62956990 | MS.gene63700:intron | 15.0% |
| !!! | TGTTGTTAATTTTCAATTTT+TGG | - | chr8.4:62957213-62957232 | MS.gene63700:intron | 15.0% |
| !!! | TTTTTCAAAAGTTTCAATAA+GGG | + | chr8.4:62957689-62957708 | None:intergenic | 15.0% |
| !!! | TTTTTTATTTCTTTTCAGAT+TGG | - | chr8.4:62959908-62959927 | MS.gene63700:intron | 15.0% |
| !!! | TTTTTTCAAAAGTTTCAATA+AGG | + | chr8.4:62957690-62957709 | None:intergenic | 15.0% |
| !! | AAATCAAAAATTGACAAAAG+GGG | + | chr8.4:62957106-62957125 | None:intergenic | 20.0% |
| !! | AAATTAGATGAAATTCTTAC+TGG | + | chr8.4:62960768-62960787 | None:intergenic | 20.0% |
| !! | AAATTGAAAATTGACAAAAG+GGG | + | chr8.4:62956900-62956919 | None:intergenic | 20.0% |
| !! | ATAGAAAAACAATAAATGCT+TGG | + | chr8.4:62959260-62959279 | None:intergenic | 20.0% |
| !! | ATAGAAAATTGAATTCTCTT+GGG | - | chr8.4:62959082-62959101 | MS.gene63700:intron | 20.0% |
| !! | GAAAATTGAAAATTGACAAA+AGG | + | chr8.4:62957003-62957022 | None:intergenic | 20.0% |
| !! | TGATATATGTTAGAACTTTA+TGG | - | chr8.4:62958628-62958647 | MS.gene63700:CDS | 20.0% |
| !! | TTATGGATTTGAAAAATGAA+AGG | - | chr8.4:62958481-62958500 | MS.gene63700:intron | 20.0% |
| !! | TTCATGATATTGTATATGTT+CGG | - | chr8.4:62960491-62960510 | MS.gene63700:intron | 20.0% |
| !! | TTCATGATATTGTATATGTT+TGG | - | chr8.4:62960491-62960510 | MS.gene63700:intron | 20.0% |
| !!! | AATCCATAAGTGATAAATTT+TGG | - | chr8.4:62957025-62957044 | MS.gene63700:intron | 20.0% |
| !!! | ATGTCTTTGAAGAATAAATT+TGG | - | chr8.4:62960038-62960057 | MS.gene63700:intron | 20.0% |
| !!! | ATTTTTTATGAATCTAGGTA+TGG | - | chr8.4:62956976-62956995 | MS.gene63700:intron | 20.0% |
| !!! | CAATTTTTACTTATGCAATA+AGG | + | chr8.4:62959225-62959244 | None:intergenic | 20.0% |
| !!! | CTATGAATAATCAATTGTTT+TGG | - | chr8.4:62960388-62960407 | MS.gene63700:intron | 20.0% |
| !!! | CTGTTAAATTTTGTTTATTG+TGG | - | chr8.4:62957245-62957264 | MS.gene63700:intron | 20.0% |
| !!! | TGTCTTTGAAGAATAAATTT+GGG | - | chr8.4:62960039-62960058 | MS.gene63700:intron | 20.0% |
| !!! | TTGTATTTTTCTTTATTCAC+AGG | - | chr8.4:62960937-62960956 | MS.gene63700:intron | 20.0% |
| ! | AAAACTTATCTTCACAAGTT+TGG | + | chr8.4:62958919-62958938 | None:intergenic | 25.0% |
| ! | AAACTTATCTTCACAAGTTT+GGG | + | chr8.4:62958918-62958937 | None:intergenic | 25.0% |
| ! | AAAGTAAAGATAAAGATCAG+AGG | + | chr8.4:62958859-62958878 | None:intergenic | 25.0% |
| ! | AAATATACTACAATGCTGTA+GGG | + | chr8.4:62960278-62960297 | None:intergenic | 25.0% |
| ! | AAATTGACTAACGAAAGATA+TGG | + | chr8.4:62958751-62958770 | None:intergenic | 25.0% |
| ! | AATAATTGAACCCCTTTATT+AGG | - | chr8.4:62957270-62957289 | MS.gene63700:intron | 25.0% |
| ! | AATCAAAACCCAATATAACT+TGG | + | chr8.4:62959642-62959661 | None:intergenic | 25.0% |
| ! | AATGAGATCCAATAAATTAG+AGG | + | chr8.4:62961617-62961636 | None:intergenic | 25.0% |
| ! | AATTAGTAGCCAAGTTATAT+TGG | - | chr8.4:62959630-62959649 | MS.gene63700:intron | 25.0% |
| ! | ATAATTGAACCCCTTTATTA+GGG | - | chr8.4:62957271-62957290 | MS.gene63700:intron | 25.0% |
| ! | ATCATATTCATAAGCATAGT+GGG | + | chr8.4:62958810-62958829 | None:intergenic | 25.0% |
| ! | ATGAGATCCAATAAATTAGA+GGG | + | chr8.4:62961616-62961635 | None:intergenic | 25.0% |
| ! | ATTAGTAGCCAAGTTATATT+GGG | - | chr8.4:62959631-62959650 | MS.gene63700:intron | 25.0% |
| ! | ATTGAGTCAAAAAATATCAG+AGG | + | chr8.4:62959613-62959632 | None:intergenic | 25.0% |
| ! | CATAGAAAATTGAATTCTCT+TGG | - | chr8.4:62959081-62959100 | MS.gene63700:intron | 25.0% |
| ! | CTTGTGATTTAATTATTCAG+TGG | - | chr8.4:62960443-62960462 | MS.gene63700:intron | 25.0% |
| ! | GAACCAAAATTTATCACTTA+TGG | + | chr8.4:62957031-62957050 | None:intergenic | 25.0% |
| ! | TAGATAACAAGCAACAAATA+AGG | + | chr8.4:62958968-62958987 | None:intergenic | 25.0% |
| ! | TATCATATTCATAAGCATAG+TGG | + | chr8.4:62958811-62958830 | None:intergenic | 25.0% |
| ! | TATTATAGATCAAAAACCGT+TGG | + | chr8.4:62959885-62959904 | None:intergenic | 25.0% |
| ! | TGAGTATTTATGTATCTTGT+TGG | - | chr8.4:62959744-62959763 | MS.gene63700:intron | 25.0% |
| ! | TGTTTCAAGGAAAAAAAAAC+AGG | + | chr8.4:62959570-62959589 | None:intergenic | 25.0% |
| ! | TTGAGTCAAAAAATATCAGA+GGG | + | chr8.4:62959612-62959631 | None:intergenic | 25.0% |
| !! | ACCATAGATTAAACTGATTT+AGG | - | chr8.4:62957575-62957594 | MS.gene63700:CDS | 25.0% |
| !! | ATTTCTGTTTTGTATTGTCT+TGG | - | chr8.4:62960784-62960803 | MS.gene63700:intron | 25.0% |
| !! | CCATAGATTAAACTGATTTA+GGG | - | chr8.4:62957576-62957595 | MS.gene63700:CDS | 25.0% |
| !! | GTCTTTGAAGAATAAATTTG+GGG | - | chr8.4:62960040-62960059 | MS.gene63700:intron | 25.0% |
| !! | TATACCGCTATAATAGTTTT+GGG | - | chr8.4:62959830-62959849 | MS.gene63700:intron | 25.0% |
| !! | TATCTAAGATTAACAACCAA+CGG | - | chr8.4:62959866-62959885 | MS.gene63700:intron | 25.0% |
| !! | TATTGATTGGCAATACTATA+CGG | + | chr8.4:62960848-62960867 | None:intergenic | 25.0% |
| !! | TCAATTTTTGTCATCCAAAA+CGG | - | chr8.4:62956913-62956932 | MS.gene63700:intron | 25.0% |
| !! | TCTAAAGTTTGAGTATATGA+AGG | + | chr8.4:62960886-62960905 | None:intergenic | 25.0% |
| !! | TCTTTGAAGAATAAATTTGG+GGG | - | chr8.4:62960041-62960060 | MS.gene63700:intron | 25.0% |
| !! | TTAACAAAATTCAACCGTTT+TGG | + | chr8.4:62956930-62956949 | None:intergenic | 25.0% |
| !!! | AGTTCAGATAATTTGTTTCT+AGG | + | chr8.4:62958884-62958903 | None:intergenic | 25.0% |
| !!! | CGTGCTAATTTTAATTTTCA+CGG | - | chr8.4:62957976-62957995 | MS.gene63700:intron | 25.0% |
| !!! | CTGATTTTTGAATTAGTTTG+AGG | - | chr8.4:62957525-62957544 | MS.gene63700:CDS | 25.0% |
| !!! | GTTCAGATAATTTGTTTCTA+GGG | + | chr8.4:62958883-62958902 | None:intergenic | 25.0% |
| !!! | TTTGTTCTTGATTTTAGAGT+CGG | - | chr8.4:62961304-62961323 | MS.gene63700:intron | 25.0% |
| !!! | TTTTTTTTCCTTGAAACAGT+TGG | - | chr8.4:62959572-62959591 | MS.gene63700:intron | 25.0% |
| AAACACTTTCTGTTATTGGT+TGG | + | chr8.4:62961684-62961703 | None:intergenic | 30.0% | |
| AACCAGTGTTATCTAATAGT+GGG | - | chr8.4:62960155-62960174 | MS.gene63700:intron | 30.0% | |
| AAGTAACCTATCATCTTCAT+TGG | - | chr8.4:62960363-62960382 | MS.gene63700:intron | 30.0% | |
| AAGTACACAATATCATACGA+AGG | + | chr8.4:62960559-62960578 | None:intergenic | 30.0% | |
| AATTATTCAGTGGCATAACT+AGG | - | chr8.4:62960453-62960472 | MS.gene63700:intron | 30.0% | |
| AATTGGAGAGAGTTAAAACA+GGG | - | chr8.4:62962028-62962047 | MS.gene63700:CDS | 30.0% | |
| AGAAACCATTAACCAAAGTA+GGG | + | chr8.4:62956763-62956782 | None:intergenic | 30.0% | |
| AGAACAAGAAACCTTAAAGT+GGG | - | chr8.4:62956586-62956605 | MS.gene63700:CDS | 30.0% | |
| AGATCTATAGATAAATGAGC+TGG | - | chr8.4:62957880-62957899 | MS.gene63700:CDS | 30.0% | |
| AGCAAAATACACCAGATTAA+AGG | + | chr8.4:62959719-62959738 | None:intergenic | 30.0% | |
| AGTGGCAATTAAGATTTCAA+CGG | + | chr8.4:62958534-62958553 | None:intergenic | 30.0% | |
| ATAATTGTGTGAAGTTGACT+AGG | - | chr8.4:62960102-62960121 | MS.gene63700:intron | 30.0% | |
| ATGTTCCTTGAAAGAAAAAG+AGG | - | chr8.4:62958328-62958347 | MS.gene63700:intron | 30.0% | |
| ATTATTCAGTGGCATAACTA+GGG | - | chr8.4:62960454-62960473 | MS.gene63700:intron | 30.0% | |
| ATTTCTCAGAGACTTATGAT+AGG | + | chr8.4:62959170-62959189 | None:intergenic | 30.0% | |
| CAAATATACTACAATGCTGT+AGG | + | chr8.4:62960279-62960298 | None:intergenic | 30.0% | |
| CATCATACAACATGTAAAAC+TGG | + | chr8.4:62961237-62961256 | None:intergenic | 30.0% | |
| CCCTAAATCAGTTTAATCTA+TGG | + | chr8.4:62957579-62957598 | None:intergenic | 30.0% | |
| CTCTTTACTATATAATCCAC+AGG | + | chr8.4:62957820-62957839 | None:intergenic | 30.0% | |
| CTTCAAACACTTTCTGTTAT+TGG | + | chr8.4:62961688-62961707 | None:intergenic | 30.0% | |
| CTTGAAAAATTCTGCAGTAA+AGG | - | chr8.4:62959191-62959210 | MS.gene63700:intron | 30.0% | |
| CTTGAAAGAAAAAGAGGAAT+AGG | - | chr8.4:62958334-62958353 | MS.gene63700:intron | 30.0% | |
| CTTTCAAAACTCGATGATAT+TGG | - | chr8.4:62961573-62961592 | MS.gene63700:intron | 30.0% | |
| GAATAGGAATAGAAACACAA+TGG | - | chr8.4:62958350-62958369 | MS.gene63700:intron | 30.0% | |
| GACTATTTATGCGAAAACAT+TGG | - | chr8.4:62959021-62959040 | MS.gene63700:intron | 30.0% | |
| GCAAAATACACCAGATTAAA+GGG | + | chr8.4:62959718-62959737 | None:intergenic | 30.0% | |
| GCTTTATGAAACAGAAAGAT+TGG | - | chr8.4:62961003-62961022 | MS.gene63700:intron | 30.0% | |
| GTATGATTATCCCTTTAATC+TGG | - | chr8.4:62959705-62959724 | MS.gene63700:intron | 30.0% | |
| TAGAACAAGAAACCTTAAAG+TGG | - | chr8.4:62956585-62956604 | MS.gene63700:CDS | 30.0% | |
| TCATGTATCTGTATCACAAA+CGG | - | chr8.4:62958556-62958575 | MS.gene63700:CDS | 30.0% | |
| TGATACTAAATAGTGTAGTG+CGG | + | chr8.4:62960228-62960247 | None:intergenic | 30.0% | |
| TGGTTGTTAATCTTAGATAG+TGG | + | chr8.4:62959865-62959884 | None:intergenic | 30.0% | |
| TGTTGGAATTTGTGTTTAGT+TGG | - | chr8.4:62959761-62959780 | MS.gene63700:intron | 30.0% | |
| TTCAGGTAATAAATGGACAA+AGG | + | chr8.4:62958093-62958112 | None:intergenic | 30.0% | |
| TTGTCCATTTATTACCTGAA+TGG | - | chr8.4:62958093-62958112 | MS.gene63700:intron | 30.0% | |
| TTTAGTCAGGTATGCATTTA+AGG | - | chr8.4:62960068-62960087 | MS.gene63700:intron | 30.0% | |
| TTTCAAGGAACATATCGAAA+AGG | + | chr8.4:62958321-62958340 | None:intergenic | 30.0% | |
| ! | ATGTTTTGTAATGTTCCTTC+TGG | + | chr8.4:62956563-62956582 | None:intergenic | 30.0% |
| ! | ATTGTGATGATCTGTTTTGT+AGG | - | chr8.4:62957319-62957338 | MS.gene63700:CDS | 30.0% |
| ! | CAGTGATTTGAGTTAAAGAT+AGG | - | chr8.4:62957618-62957637 | MS.gene63700:CDS | 30.0% |
| ! | CATTCTTGCTTTAAGTAACT+TGG | + | chr8.4:62961191-62961210 | None:intergenic | 30.0% |
| ! | CTATACCGCTATAATAGTTT+TGG | - | chr8.4:62959829-62959848 | MS.gene63700:intron | 30.0% |
| ! | CTATTCCTCTTTTTCTTTCA+AGG | + | chr8.4:62958336-62958355 | None:intergenic | 30.0% |
| ! | CTTGTGAAGATAAGTTTTCA+AGG | - | chr8.4:62958921-62958940 | MS.gene63700:intron | 30.0% |
| ! | CTTTACTGCAGAATTTTTCA+AGG | + | chr8.4:62959193-62959212 | None:intergenic | 30.0% |
| ! | GATATTGGTTGAAAGTTAAG+TGG | - | chr8.4:62961588-62961607 | MS.gene63700:intron | 30.0% |
| ! | TATCATATTTCTATCGAGTC+CGG | + | chr8.4:62958613-62958632 | None:intergenic | 30.0% |
| !! | ACTTTAAGGTTTCTTGTTCT+AGG | + | chr8.4:62956586-62956605 | None:intergenic | 30.0% |
| !! | ATACCGCTATAATAGTTTTG+GGG | - | chr8.4:62959831-62959850 | MS.gene63700:intron | 30.0% |
| !! | ATTTGTTGCTTGTTATCTAG+AGG | - | chr8.4:62958969-62958988 | MS.gene63700:intron | 30.0% |
| !! | GAAACTTTTGAAAAAAGCGT+AGG | - | chr8.4:62957694-62957713 | MS.gene63700:intron | 30.0% |
| !! | GAGGCTTTAAATTAATCTTG+AGG | - | chr8.4:62958988-62959007 | MS.gene63700:intron | 30.0% |
| !! | GTTAAATTCCTGCTATTTCT+AGG | + | chr8.4:62958272-62958291 | None:intergenic | 30.0% |
| !! | TAATCTGCTTGTTATATCTG+TGG | - | chr8.4:62961099-62961118 | MS.gene63700:intron | 30.0% |
| !! | TGATTTAGGGTGAATCTTTT+GGG | - | chr8.4:62957589-62957608 | MS.gene63700:CDS | 30.0% |
| !!! | ATAACCACGAGGATTTTTTT+CGG | + | chr8.4:62961792-62961811 | None:intergenic | 30.0% |
| !!! | ATTCCCATCAGTTTTAGAAA+AGG | - | chr8.4:62960001-62960020 | MS.gene63700:intron | 30.0% |
| !!! | CAATATCATCGAGTTTTGAA+AGG | + | chr8.4:62961575-62961594 | None:intergenic | 30.0% |
| !!! | GTGATAAATTTTGGTTCTTG+TGG | - | chr8.4:62957034-62957053 | MS.gene63700:intron | 30.0% |
| !!! | TTCCCATCAGTTTTAGAAAA+GGG | - | chr8.4:62960002-62960021 | MS.gene63700:intron | 30.0% |
| !!! | TTGGGTTTTGATTTGTTTTC+TGG | - | chr8.4:62959649-62959668 | MS.gene63700:intron | 30.0% |
| AAAAATATCAGAGGGCAAAC+AGG | + | chr8.4:62959604-62959623 | None:intergenic | 35.0% | |
| AAAACCCCTACTTTGGTTAA+TGG | - | chr8.4:62956755-62956774 | MS.gene63700:intron | 35.0% | |
| AAAAGAGGCAGAAGAAGAAT+TGG | - | chr8.4:62962011-62962030 | MS.gene63700:CDS | 35.0% | |
| AAAATATCAGAGGGCAAACA+GGG | + | chr8.4:62959603-62959622 | None:intergenic | 35.0% | |
| AAACTGGACATATTGAGTAC+TGG | - | chr8.4:62958580-62958599 | MS.gene63700:CDS | 35.0% | |
| ACAAAACAACTTACCTCTTG+TGG | + | chr8.4:62961289-62961308 | None:intergenic | 35.0% | |
| ACAATCTTTCCTCAAACACA+CGG | - | chr8.4:62958235-62958254 | MS.gene63700:intron | 35.0% | |
| ACAGACCAATCCCTAATAAA+GGG | + | chr8.4:62957284-62957303 | None:intergenic | 35.0% | |
| ACGTATAGTAGAAAAGATGG+TGG | - | chr8.4:62957756-62957775 | MS.gene63700:intron | 35.0% | |
| AGACCCCAAAACTATTATAG+CGG | + | chr8.4:62959837-62959856 | None:intergenic | 35.0% | |
| AGCACGTATAGTAGAAAAGA+TGG | - | chr8.4:62957753-62957772 | MS.gene63700:intron | 35.0% | |
| AGTGATTGGAATTGGGAAAT+TGG | + | chr8.4:62958064-62958083 | None:intergenic | 35.0% | |
| AGTGGATCCCTCTAATTTAT+TGG | - | chr8.4:62961606-62961625 | MS.gene63700:intron | 35.0% | |
| AGTTAAAACAGGGAAGAACA+AGG | - | chr8.4:62962038-62962057 | MS.gene63700:CDS | 35.0% | |
| AGTTCCAACTTAGTGGAATA+AGG | - | chr8.4:62958671-62958690 | MS.gene63700:intron | 35.0% | |
| ATAGAGCCAATGAAGATGAT+AGG | + | chr8.4:62960372-62960391 | None:intergenic | 35.0% | |
| ATAGCGGTATAGCAGATAAT+AGG | + | chr8.4:62959821-62959840 | None:intergenic | 35.0% | |
| ATCGGTTGAGATAATGAGAA+CGG | + | chr8.4:62956693-62956712 | None:intergenic | 35.0% | |
| ATGCATCTACGATACTAACT+GGG | + | chr8.4:62957952-62957971 | None:intergenic | 35.0% | |
| ATGCCTCAAACAAAACTAGA+TGG | + | chr8.4:62958182-62958201 | None:intergenic | 35.0% | |
| ATTCACAAAAACCCCTACTT+TGG | - | chr8.4:62956748-62956767 | MS.gene63700:intron | 35.0% | |
| CAACATTTCAATATCCCTAC+GGG | + | chr8.4:62959325-62959344 | None:intergenic | 35.0% | |
| CAACCAGTGTTATCTAATAG+TGG | - | chr8.4:62960154-62960173 | MS.gene63700:intron | 35.0% | |
| CACACCATTCAGGTAATAAA+TGG | + | chr8.4:62958100-62958119 | None:intergenic | 35.0% | |
| CATGTATCTGTATCACAAAC+GGG | - | chr8.4:62958557-62958576 | MS.gene63700:CDS | 35.0% | |
| CATTTATTACCTGAATGGTG+TGG | - | chr8.4:62958098-62958117 | MS.gene63700:intron | 35.0% | |
| CTACTGCATATGGATTCATA+CGG | + | chr8.4:62961940-62961959 | None:intergenic | 35.0% | |
| CTCTTGGGAAATTAAGACAT+GGG | - | chr8.4:62959097-62959116 | MS.gene63700:intron | 35.0% | |
| GAAACCATTAACCAAAGTAG+GGG | + | chr8.4:62956762-62956781 | None:intergenic | 35.0% | |
| GAATTGGAGAGAGTTAAAAC+AGG | - | chr8.4:62962027-62962046 | MS.gene63700:CDS | 35.0% | |
| GAGAAACCATTAACCAAAGT+AGG | + | chr8.4:62956764-62956783 | None:intergenic | 35.0% | |
| GATTATCACAAATAACCACG+AGG | + | chr8.4:62961803-62961822 | None:intergenic | 35.0% | |
| GCAACATTTCAATATCCCTA+CGG | + | chr8.4:62959326-62959345 | None:intergenic | 35.0% | |
| GGTAAAAAACATACCAACCT+CGG | + | chr8.4:62958730-62958749 | None:intergenic | 35.0% | |
| TACCCACTATTAGATAACAC+TGG | + | chr8.4:62960160-62960179 | None:intergenic | 35.0% | |
| TACTTGATCTCTACTGCATA+TGG | + | chr8.4:62961950-62961969 | None:intergenic | 35.0% | |
| TATCCTGAAAATAGATACCG+AGG | - | chr8.4:62958710-62958729 | MS.gene63700:intron | 35.0% | |
| TATGCGAAAACATTGGTATC+TGG | - | chr8.4:62959028-62959047 | MS.gene63700:intron | 35.0% | |
| TCTCTTGGGAAATTAAGACA+TGG | - | chr8.4:62959096-62959115 | MS.gene63700:intron | 35.0% | |
| TGATACAGATACATGACAAG+TGG | + | chr8.4:62958552-62958571 | None:intergenic | 35.0% | |
| TGCAATTCAGAGTCTTTGAT+TGG | - | chr8.4:62958136-62958155 | MS.gene63700:intron | 35.0% | |
| TGTAATGTTCCTTCTGGTAA+TGG | + | chr8.4:62956557-62956576 | None:intergenic | 35.0% | |
| TTATTCAGTGGCATAACTAG+GGG | - | chr8.4:62960455-62960474 | MS.gene63700:intron | 35.0% | |
| TTATTGGATCTCATTCTCTG+TGG | - | chr8.4:62961622-62961641 | MS.gene63700:intron | 35.0% | |
| TTCATAAAGCGAGAGGAATT+CGG | + | chr8.4:62960993-62961012 | None:intergenic | 35.0% | |
| TTTAGAAAAGGGTCTTGCAA+AGG | - | chr8.4:62960013-62960032 | MS.gene63700:intron | 35.0% | |
| TTTCTGTTTCATAAAGCGAG+AGG | + | chr8.4:62961000-62961019 | None:intergenic | 35.0% | |
| ! | AAGTGTTTGAAGTCAGAAGT+CGG | - | chr8.4:62961696-62961715 | MS.gene63700:intron | 35.0% |
| ! | AATTTGTTCAATGAGCTAGC+TGG | - | chr8.4:62957395-62957414 | MS.gene63700:CDS | 35.0% |
| ! | ATAGTGGGATTCATGCAAAA+AGG | + | chr8.4:62958795-62958814 | None:intergenic | 35.0% |
| ! | ATAGTGTAGCGGAATTTGAA+CGG | - | chr8.4:62961444-62961463 | MS.gene63700:intron | 35.0% |
| ! | GTGTTGAATTTTGCTTCTTG+TGG | - | chr8.4:62956862-62956881 | MS.gene63700:intron | 35.0% |
| ! | TTTTGTCAAGTAGCGACTAT+AGG | - | chr8.4:62960250-62960269 | MS.gene63700:intron | 35.0% |
| !! | AGTCCCACCATTTTAGAAAT+GGG | + | chr8.4:62961653-62961672 | None:intergenic | 35.0% |
| !! | CTGATTTAGGGTGAATCTTT+TGG | - | chr8.4:62957588-62957607 | MS.gene63700:CDS | 35.0% |
| !! | GAAAATGCAGCAGAAGTATT+TGG | - | chr8.4:62961210-62961229 | MS.gene63700:CDS | 35.0% |
| !! | TAGAAAAGATGGTGGAAACT+AGG | - | chr8.4:62957764-62957783 | MS.gene63700:intron | 35.0% |
| !!! | AGACCCTTTTCTAAAACTGA+TGG | + | chr8.4:62960008-62960027 | None:intergenic | 35.0% |
| !!! | ATTGGGAAATTGGTTTTCAG+TGG | + | chr8.4:62958054-62958073 | None:intergenic | 35.0% |
| !!! | GACCCTTTTCTAAAACTGAT+GGG | + | chr8.4:62960007-62960026 | None:intergenic | 35.0% |
| !!! | GTTTTGAAAGGAATGTCGAA+AGG | + | chr8.4:62961563-62961582 | None:intergenic | 35.0% |
| !!! | TCACCATCTAGTTTTGTTTG+AGG | - | chr8.4:62958176-62958195 | MS.gene63700:intron | 35.0% |
| !!! | TGTTTTGGTTCTTCTGATTC+TGG | - | chr8.4:62960403-62960422 | MS.gene63700:intron | 35.0% |
| AAAACATTGGTATCTGGTGG+TGG | - | chr8.4:62959034-62959053 | MS.gene63700:intron | 40.0% | |
| AAACATTGGTATCTGGTGGT+GGG | - | chr8.4:62959035-62959054 | MS.gene63700:intron | 40.0% | |
| AAGATAAAGATCAGAGGCCA+CGG | + | chr8.4:62958853-62958872 | None:intergenic | 40.0% | |
| ACAAACCATGGCATAGAGAT+TGG | + | chr8.4:62956786-62956805 | None:intergenic | 40.0% | |
| ACAGTTGAGCATGAGGATAT+GGG | - | chr8.4:62957353-62957372 | MS.gene63700:CDS | 40.0% | |
| ACCAACGAAAACCCACTTTA+AGG | + | chr8.4:62956600-62956619 | None:intergenic | 40.0% | |
| AGTGCAAATTGACAGGTTAC+TGG | - | chr8.4:62961874-62961893 | MS.gene63700:CDS | 40.0% | |
| ATATCCTCATGCTCAACTGT+AGG | + | chr8.4:62957353-62957372 | None:intergenic | 40.0% | |
| ATGGGAATTGCAACAGTCTA+AGG | + | chr8.4:62959989-62960008 | None:intergenic | 40.0% | |
| ATGTAGCAGTTCCAACTTAG+TGG | - | chr8.4:62958664-62958683 | MS.gene63700:intron | 40.0% | |
| ATTGCAACAGTCTAAGGGTA+TGG | + | chr8.4:62959983-62960002 | None:intergenic | 40.0% | |
| CAAAAGGACCTAGAAATAGC+AGG | - | chr8.4:62958261-62958280 | MS.gene63700:intron | 40.0% | |
| CAACTTAGTGGAATAAGGCT+TGG | - | chr8.4:62958676-62958695 | MS.gene63700:intron | 40.0% | |
| CAAGTTATCTTCGACGATGA+AGG | - | chr8.4:62961076-62961095 | MS.gene63700:intron | 40.0% | |
| CACAGACCAATCCCTAATAA+AGG | + | chr8.4:62957285-62957304 | None:intergenic | 40.0% | |
| CAGACCAATCCCTAATAAAG+GGG | + | chr8.4:62957283-62957302 | None:intergenic | 40.0% | |
| CATGCATCTACGATACTAAC+TGG | + | chr8.4:62957953-62957972 | None:intergenic | 40.0% | |
| CTCAAACACACGGTTTCAAA+AGG | - | chr8.4:62958245-62958264 | MS.gene63700:intron | 40.0% | |
| CTCATGCAGTAATATACGCA+TGG | + | chr8.4:62961514-62961533 | None:intergenic | 40.0% | |
| CTGAAAATAGATACCGAGGT+TGG | - | chr8.4:62958714-62958733 | MS.gene63700:intron | 40.0% | |
| GAAGATCAACCATTACCAGA+AGG | - | chr8.4:62956545-62956564 | MS.gene63700:CDS | 40.0% | |
| GAATAGAAACACAATGGCAG+TGG | - | chr8.4:62958356-62958375 | MS.gene63700:intron | 40.0% | |
| GAGAGACAGTGATTGGAATT+GGG | + | chr8.4:62958071-62958090 | None:intergenic | 40.0% | |
| GAGAGTGAAGAAACAAACCA+TGG | + | chr8.4:62956798-62956817 | None:intergenic | 40.0% | |
| GATCAGTAGTGCAAATTGAC+AGG | - | chr8.4:62961867-62961886 | MS.gene63700:CDS | 40.0% | |
| GCAGCACATACTTGATTAAC+AGG | + | chr8.4:62959301-62959320 | None:intergenic | 40.0% | |
| GCGGTTAGAGAATAGAGTAA+CGG | - | chr8.4:62961972-62961991 | MS.gene63700:CDS | 40.0% | |
| GCTAAGATTATGAGCAGGAT+CGG | + | chr8.4:62956711-62956730 | None:intergenic | 40.0% | |
| GCTACAACACCAGTTAAAAG+AGG | - | chr8.4:62961996-62962015 | MS.gene63700:CDS | 40.0% | |
| TACAGTTGAGCATGAGGATA+TGG | - | chr8.4:62957352-62957371 | MS.gene63700:CDS | 40.0% | |
| TACGATACTAACTGGGAAAC+TGG | + | chr8.4:62957945-62957964 | None:intergenic | 40.0% | |
| TCATAAAGCGAGAGGAATTC+GGG | + | chr8.4:62960992-62961011 | None:intergenic | 40.0% | |
| TGAACCCCTTTATTAGGGAT+TGG | - | chr8.4:62957276-62957295 | MS.gene63700:intron | 40.0% | |
| TGCAATTCCTGGAATTGATG+AGG | - | chr8.4:62957418-62957437 | MS.gene63700:intron | 40.0% | |
| TGCAATTTCAATGCTACCCA+TGG | - | chr8.4:62959456-62959475 | MS.gene63700:intron | 40.0% | |
| TGGGAATTGCAACAGTCTAA+GGG | + | chr8.4:62959988-62960007 | None:intergenic | 40.0% | |
| TTGGTGAAGATGCAATCCTT+GGG | - | chr8.4:62960688-62960707 | MS.gene63700:intron | 40.0% | |
| TTTCAGATTGGTGCAGACAA+TGG | - | chr8.4:62959920-62959939 | MS.gene63700:intron | 40.0% | |
| TTTCTCCAATCTCTATGCCA+TGG | - | chr8.4:62956778-62956797 | MS.gene63700:intron | 40.0% | |
| TTTGGTGAAGATGCAATCCT+TGG | - | chr8.4:62960687-62960706 | MS.gene63700:intron | 40.0% | |
| ! | AAACTAGGCTTAGGGTGTTT+GGG | - | chr8.4:62957779-62957798 | MS.gene63700:intron | 40.0% |
| ! | ACTAAGTTGGAACTGCTACA+TGG | + | chr8.4:62958665-62958684 | None:intergenic | 40.0% |
| ! | ATGATCTGTTTTGTAGGAGG+TGG | - | chr8.4:62957325-62957344 | MS.gene63700:CDS | 40.0% |
| ! | ATTTGGGGGTTTGTTTAGTC+AGG | - | chr8.4:62960055-62960074 | MS.gene63700:intron | 40.0% |
| ! | CAACCTCGGTATCTATTTTC+AGG | + | chr8.4:62958716-62958735 | None:intergenic | 40.0% |
| ! | CGGTTTTGCAGAACAGTTTA+GGG | - | chr8.4:62959422-62959441 | MS.gene63700:intron | 40.0% |
| ! | CTTCTTCTGCCTCTTTTAAC+TGG | + | chr8.4:62962008-62962027 | None:intergenic | 40.0% |
| ! | GTGATGATCTGTTTTGTAGG+AGG | - | chr8.4:62957322-62957341 | MS.gene63700:CDS | 40.0% |
| ! | TAGTGTAGCGGAATTTGAAC+GGG | - | chr8.4:62961445-62961464 | MS.gene63700:intron | 40.0% |
| ! | TTTGGCATGGGTGATGATTT+TGG | - | chr8.4:62960669-62960688 | MS.gene63700:intron | 40.0% |
| !! | ACCTTAAAGTGGGTTTTCGT+TGG | - | chr8.4:62956596-62956615 | MS.gene63700:CDS | 40.0% |
| !! | AGGATATGGGTAGTTCTGAT+GGG | - | chr8.4:62957366-62957385 | MS.gene63700:CDS | 40.0% |
| !! | CAAGCCTTATTCCACTAAGT+TGG | + | chr8.4:62958678-62958697 | None:intergenic | 40.0% |
| !! | GAGTCCCACCATTTTAGAAA+TGG | + | chr8.4:62961654-62961673 | None:intergenic | 40.0% |
| !! | GGACCCATTTCTAAAATGGT+GGG | - | chr8.4:62961647-62961666 | MS.gene63700:intron | 40.0% |
| !! | TTAAAGTGGGTTTTCGTTGG+TGG | - | chr8.4:62956599-62956618 | MS.gene63700:CDS | 40.0% |
| !!! | AATTTGAACGGGCTGCTTTT+GGG | - | chr8.4:62961456-62961475 | MS.gene63700:intron | 40.0% |
| !!! | CTTTTGAAACCGTGTGTTTG+AGG | + | chr8.4:62958247-62958266 | None:intergenic | 40.0% |
| AAACACAATGGCAGTGGCTT+CGG | - | chr8.4:62958362-62958381 | MS.gene63700:intron | 45.0% | |
| AACTTGGATTCGACATCTGC+AGG | + | chr8.4:62961175-62961194 | None:intergenic | 45.0% | |
| AGATAAAGATCAGAGGCCAC+GGG | + | chr8.4:62958852-62958871 | None:intergenic | 45.0% | |
| ATCTGCTTCAGTACCCAATC+TGG | - | chr8.4:62957919-62957938 | MS.gene63700:CDS | 45.0% | |
| ATGACTCGCATGTTTGGCAT+GGG | - | chr8.4:62960657-62960676 | MS.gene63700:intron | 45.0% | |
| ATTTGTGCTGGGGATTGCAA+TGG | - | chr8.4:62959544-62959563 | MS.gene63700:intron | 45.0% | |
| CGAGTAACTGTGTTGCAGAA+TGG | - | chr8.4:62958444-62958463 | MS.gene63700:intron | 45.0% | |
| CTCATAGCCTCATCAATTCC+AGG | + | chr8.4:62957428-62957447 | None:intergenic | 45.0% | |
| CTGTATCACAAACGGGAAAC+TGG | - | chr8.4:62958564-62958583 | MS.gene63700:CDS | 45.0% | |
| GACAAAGGAGAGACAGTGAT+TGG | + | chr8.4:62958078-62958097 | None:intergenic | 45.0% | |
| GATGCCGAAAAAAATCCTCG+TGG | - | chr8.4:62961785-62961804 | MS.gene63700:intron | 45.0% | |
| GCAGTAGAGATCAAGTAGAG+CGG | - | chr8.4:62961953-62961972 | MS.gene63700:CDS | 45.0% | |
| GCATCGCTAAGATTATGAGC+AGG | + | chr8.4:62956716-62956735 | None:intergenic | 45.0% | |
| GCGAAAACATTGGTATCTGG+TGG | - | chr8.4:62959031-62959050 | MS.gene63700:intron | 45.0% | |
| GGAGAGACAGTGATTGGAAT+TGG | + | chr8.4:62958072-62958091 | None:intergenic | 45.0% | |
| GGGAATGCAAACACAGACAA+AGG | + | chr8.4:62960972-62960991 | None:intergenic | 45.0% | |
| GTATATCAGCGCTATGGTGT+AGG | - | chr8.4:62960177-62960196 | MS.gene63700:intron | 45.0% | |
| GTATGTAGAGAGAAGACCTG+TGG | - | chr8.4:62957801-62957820 | MS.gene63700:intron | 45.0% | |
| GTATTTGATACTGCTCCCAC+TGG | - | chr8.4:62959957-62959976 | MS.gene63700:intron | 45.0% | |
| GTCAACAGTAGCAACGAAAG+CGG | - | chr8.4:62959485-62959504 | MS.gene63700:intron | 45.0% | |
| TCACAGATGACTCGCATGTT+TGG | - | chr8.4:62960651-62960670 | MS.gene63700:intron | 45.0% | |
| TCGCAACAACACTAGAGAGA+GGG | - | chr8.4:62957717-62957736 | MS.gene63700:intron | 45.0% | |
| TGGATCTCATTCTCTGTGGT+GGG | - | chr8.4:62961626-62961645 | MS.gene63700:intron | 45.0% | |
| TGGGAAGCTAGAAGGAATGA+AGG | - | chr8.4:62960707-62960726 | MS.gene63700:intron | 45.0% | |
| TGGTGAGCGTAACACTGTTA+TGG | - | chr8.4:62958464-62958483 | MS.gene63700:intron | 45.0% | |
| TTGGATCTCATTCTCTGTGG+TGG | - | chr8.4:62961625-62961644 | MS.gene63700:intron | 45.0% | |
| TTTCAGTGGAGACGACAAGA+TGG | + | chr8.4:62958040-62958059 | None:intergenic | 45.0% | |
| ! | GAAACTAGGCTTAGGGTGTT+TGG | - | chr8.4:62957778-62957797 | MS.gene63700:intron | 45.0% |
| ! | GCGGTTTTGCAGAACAGTTT+AGG | - | chr8.4:62959421-62959440 | MS.gene63700:intron | 45.0% |
| ! | GCTGTAGCTCTATAGTGTAG+CGG | - | chr8.4:62961433-62961452 | MS.gene63700:intron | 45.0% |
| ! | GGGTATTGCCAACTGTTTCA+AGG | + | chr8.4:62959583-62959602 | None:intergenic | 45.0% |
| ! | GGTGGGACCCATTTCTAAAA+TGG | - | chr8.4:62961643-62961662 | MS.gene63700:intron | 45.0% |
| ! | TAGTGGGTATATCAGCGCTA+TGG | - | chr8.4:62960171-62960190 | MS.gene63700:intron | 45.0% |
| !! | AGATGGTGGAAACTAGGCTT+AGG | - | chr8.4:62957770-62957789 | MS.gene63700:intron | 45.0% |
| !! | ATTGAGTACTGGAGCAGATC+CGG | - | chr8.4:62958591-62958610 | MS.gene63700:CDS | 45.0% |
| !! | ATTGGGTACTGAAGCAGATC+TGG | + | chr8.4:62957918-62957937 | None:intergenic | 45.0% |
| !! | GAGGATATGGGTAGTTCTGA+TGG | - | chr8.4:62957365-62957384 | MS.gene63700:CDS | 45.0% |
| !! | GATGGTGGAAACTAGGCTTA+GGG | - | chr8.4:62957771-62957790 | MS.gene63700:intron | 45.0% |
| !! | GGGACCCATTTCTAAAATGG+TGG | - | chr8.4:62961646-62961665 | MS.gene63700:intron | 45.0% |
| !! | TATGGGTAGTTCTGATGGGA+TGG | - | chr8.4:62957370-62957389 | MS.gene63700:CDS | 45.0% |
| !! | TCATTCCTTCTAGCTTCCCA+AGG | + | chr8.4:62960707-62960726 | None:intergenic | 45.0% |
| !!! | GAATTTGAACGGGCTGCTTT+TGG | - | chr8.4:62961455-62961474 | MS.gene63700:intron | 45.0% |
| !! | ATTCATAAAAATAAAATAAA+AGG | + | chr8.4:62957074-62957093 | None:intergenic | 5.0% |
| !! | TTCATAAAAATAAAATAAAA+GGG | + | chr8.4:62957073-62957092 | None:intergenic | 5.0% |
| !!! | TTAACTTAATTTTATATAAA+GGG | - | chr8.4:62958287-62958306 | MS.gene63700:intron | 5.0% |
| !!! | TTTAACTTAATTTTATATAA+AGG | - | chr8.4:62958286-62958305 | MS.gene63700:intron | 5.0% |
| AACTGGGAAACTGGCCAGAT+TGG | + | chr8.4:62957936-62957955 | None:intergenic | 50.0% | |
| ACCTTCTCTGCCGCAATTAG+CGG | + | chr8.4:62959511-62959530 | None:intergenic | 50.0% | |
| ACTGGGAAACTGGCCAGATT+GGG | + | chr8.4:62957935-62957954 | None:intergenic | 50.0% | |
| ACTGTGATCACGCGCTAAAG+CGG | - | chr8.4:62959402-62959421 | MS.gene63700:intron | 50.0% | |
| ATAGAGCTACAGCGCTGCTA+TGG | + | chr8.4:62961426-62961445 | None:intergenic | 50.0% | |
| CTTACCTCTTGTGGAAGCAG+TGG | + | chr8.4:62961280-62961299 | None:intergenic | 50.0% | |
| GATGACTCGCATGTTTGGCA+TGG | - | chr8.4:62960656-62960675 | MS.gene63700:intron | 50.0% | |
| GCAATCCTTGGGAAGCTAGA+AGG | - | chr8.4:62960699-62960718 | MS.gene63700:intron | 50.0% | |
| GGATCCTACAGTTGAGCATG+AGG | - | chr8.4:62957346-62957365 | MS.gene63700:CDS | 50.0% | |
| GTCGCAACAACACTAGAGAG+AGG | - | chr8.4:62957716-62957735 | MS.gene63700:intron | 50.0% | |
| TACCTGAATGGTGTGGTCGT+GGG | - | chr8.4:62958105-62958124 | MS.gene63700:intron | 50.0% | |
| TACTGTTGACCACTCGCCAT+GGG | + | chr8.4:62959475-62959494 | None:intergenic | 50.0% | |
| TGCAATCCCCAGCACAAATG+CGG | + | chr8.4:62959543-62959562 | None:intergenic | 50.0% | |
| TGGTGAGGCAAATCGAGAAC+TGG | + | chr8.4:62958020-62958039 | None:intergenic | 50.0% | |
| TGTTGCTGTCGAGCTGTTGA+GGG | - | chr8.4:62958385-62958404 | MS.gene63700:intron | 50.0% | |
| TTACCTGAATGGTGTGGTCG+TGG | - | chr8.4:62958104-62958123 | MS.gene63700:intron | 50.0% | |
| TTCACAGCCGCATTTGTGCT+GGG | - | chr8.4:62959533-62959552 | MS.gene63700:intron | 50.0% | |
| TTTCACAGCCGCATTTGTGC+TGG | - | chr8.4:62959532-62959551 | MS.gene63700:intron | 50.0% | |
| ! | AAGTATGTGCTGCTCCCGTA+GGG | - | chr8.4:62959308-62959327 | MS.gene63700:intron | 50.0% |
| ! | AAGTCGGAGAGTGTGTTGCT+AGG | - | chr8.4:62961712-62961731 | MS.gene63700:intron | 50.0% |
| ! | AGTCTAAGGGTATGGCCAGT+GGG | + | chr8.4:62959975-62959994 | None:intergenic | 50.0% |
| !! | ATTGGTATCTGGTGGTGGGA+TGG | - | chr8.4:62959039-62959058 | MS.gene63700:intron | 50.0% |
| !! | CAGAGCGATTCAAGGTACTG+CGG | - | chr8.4:62958416-62958435 | MS.gene63700:intron | 50.0% |
| !!! | GTTTTCGTTGGTGGCAAAGG+TGG | - | chr8.4:62956608-62956627 | MS.gene63700:CDS | 50.0% |
| !!! | TGGGTTTTCGTTGGTGGCAA+AGG | - | chr8.4:62956605-62956624 | MS.gene63700:CDS | 50.0% |
| AACCCACGACCACACCATTC+AGG | + | chr8.4:62958110-62958129 | None:intergenic | 55.0% | |
| ACGAAAGCGGCCGCTAATTG+CGG | - | chr8.4:62959498-62959517 | MS.gene63700:intron | 55.0% | |
| ACTAGAGAGAGGGAGAGAGC+TGG | - | chr8.4:62957727-62957746 | MS.gene63700:intron | 55.0% | |
| CTACTGTTGACCACTCGCCA+TGG | + | chr8.4:62959476-62959495 | None:intergenic | 55.0% | |
| GAATGGTGTGGTCGTGGGTT+GGG | - | chr8.4:62958110-62958129 | MS.gene63700:intron | 55.0% | |
| GAGCTAGCTGGTGCAATTCC+TGG | - | chr8.4:62957407-62957426 | MS.gene63700:CDS | 55.0% | |
| GTGGAGACGACAAGATGGTG+AGG | + | chr8.4:62958035-62958054 | None:intergenic | 55.0% | |
| TCAATGCTACCCATGGCGAG+TGG | - | chr8.4:62959463-62959482 | MS.gene63700:intron | 55.0% | |
| TCACAGCCGCATTTGTGCTG+GGG | - | chr8.4:62959534-62959553 | MS.gene63700:intron | 55.0% | |
| TGAATGGTGTGGTCGTGGGT+TGG | - | chr8.4:62958109-62958128 | MS.gene63700:intron | 55.0% | |
| ! | CAAGTATGTGCTGCTCCCGT+AGG | - | chr8.4:62959307-62959326 | MS.gene63700:intron | 55.0% |
| ! | CAGTCTAAGGGTATGGCCAG+TGG | + | chr8.4:62959976-62959995 | None:intergenic | 55.0% |
| ! | GGAGTGTCAGAGTGTGTTGC+TGG | + | chr8.4:62961542-62961561 | None:intergenic | 55.0% |
| ! | GTGTTGCTGTCGAGCTGTTG+AGG | - | chr8.4:62958384-62958403 | MS.gene63700:intron | 55.0% |
| !! | AGCGATTCAAGGTACTGCGG+CGG | - | chr8.4:62958419-62958438 | MS.gene63700:intron | 55.0% |
| !! | GTTGGTGGCAAAGGTGGTGT+TGG | - | chr8.4:62956614-62956633 | MS.gene63700:CDS | 55.0% |
| GCCGCTAATTGCGGCAGAGA+AGG | - | chr8.4:62959507-62959526 | MS.gene63700:intron | 60.0% | |
| GCTGCCACTGCTTCCACAAG+AGG | - | chr8.4:62961273-62961292 | MS.gene63700:intron | 60.0% | |
| TGCTGCGGCAGAGCGATTCA+AGG | - | chr8.4:62958408-62958427 | MS.gene63700:intron | 60.0% | |
| !! | TCGAGCTGTTGAGGGTGCTG+CGG | - | chr8.4:62958393-62958412 | MS.gene63700:intron | 60.0% |
| TGCTGTCCTGCACTCTCCCG+TGG | - | chr8.4:62958833-62958852 | MS.gene63700:intron | 65.0% | |
| ! | ACGGGAGAGTGCAGGACAGC+AGG | + | chr8.4:62958834-62958853 | None:intergenic | 65.0% |
| ! | CAGAGGCCACGGGAGAGTGC+AGG | + | chr8.4:62958842-62958861 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 62956542 | 62962065 | 62956542 | ID=MS.gene63700 |
| chr8.4 | mRNA | 62956542 | 62962065 | 62956542 | ID=MS.gene63700.t1;Parent=MS.gene63700 |
| chr8.4 | exon | 62961808 | 62962065 | 62961808 | ID=MS.gene63700.t1.exon1;Parent=MS.gene63700.t1 |
| chr8.4 | CDS | 62961808 | 62962065 | 62961808 | ID=cds.MS.gene63700.t1;Parent=MS.gene63700.t1 |
| chr8.4 | exon | 62961142 | 62961266 | 62961142 | ID=MS.gene63700.t1.exon2;Parent=MS.gene63700.t1 |
| chr8.4 | CDS | 62961142 | 62961266 | 62961142 | ID=cds.MS.gene63700.t1;Parent=MS.gene63700.t1 |
| chr8.4 | exon | 62958531 | 62958681 | 62958531 | ID=MS.gene63700.t1.exon3;Parent=MS.gene63700.t1 |
| chr8.4 | CDS | 62958531 | 62958681 | 62958531 | ID=cds.MS.gene63700.t1;Parent=MS.gene63700.t1 |
| chr8.4 | exon | 62957840 | 62957950 | 62957840 | ID=MS.gene63700.t1.exon4;Parent=MS.gene63700.t1 |
| chr8.4 | CDS | 62957840 | 62957950 | 62957840 | ID=cds.MS.gene63700.t1;Parent=MS.gene63700.t1 |
| chr8.4 | exon | 62957510 | 62957648 | 62957510 | ID=MS.gene63700.t1.exon5;Parent=MS.gene63700.t1 |
| chr8.4 | CDS | 62957510 | 62957648 | 62957510 | ID=cds.MS.gene63700.t1;Parent=MS.gene63700.t1 |
| chr8.4 | exon | 62957313 | 62957428 | 62957313 | ID=MS.gene63700.t1.exon6;Parent=MS.gene63700.t1 |
| chr8.4 | CDS | 62957313 | 62957428 | 62957313 | ID=cds.MS.gene63700.t1;Parent=MS.gene63700.t1 |
| chr8.4 | exon | 62956542 | 62956718 | 62956542 | ID=MS.gene63700.t1.exon7;Parent=MS.gene63700.t1 |
| chr8.4 | CDS | 62956542 | 62956718 | 62956542 | ID=cds.MS.gene63700.t1;Parent=MS.gene63700.t1 |
| Gene Sequence |
| Protein sequence |
